Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004975

Physical Location & Seq

Genomic Coordinates Forward (+)

11414730 .. 11421260

Gene Structure 6531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0132300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGTCGACCCAGAAATCGAAGGGAGCTCCGGCCGCTCCGGTAGAGCTCGACAGCAGCGACGACGAGAACGCCGCCGCGACGCCGAACATCACGAAGAAAATCCCGCCGGCGGCGGCCGTCGGGCAGCAAACCCTAACCTCCCGTAGCTTCTGGAAAGCCGGCGACTATGTTGTGGGCCCCTCCAAGCGGCCGTCTCTGGCGAAAGGGCAATTGGAACACGCGCGAGTCCATCCCAAGTTTCTTCATTCCAATGCTACTTCGCATAAGTGGGCTTTTGGAGCCATTGCTGAGCTGTTGGACAATGGTGTTGATGAGATACAAAATGGGGCAACTTTTGTCAGTGTGGATAAGATTGATCTCAAGAAAGACAACTCTCCGGCATTACTTTTCCGAGATGATGGGGGTGGGATGAATCCGGAAGGTCTCCGCAAATGCATGAGCTTGGGTTATTCTACAAAGAAGTCAAACACAACTATCGGGCAATATGGTAATGGATTCAAGACAAGTACTATGAGACTAGGTGCTGATGCCATCGTTTTCAGTCGTGCAACTCGTGGAAGCAAAGCTACCCAGAGTATTGGACTTTTATCTTATACGTTCCTACGGAGAACTGGGCAGGATGATGTTATTGTTCCAATGATTGATTTTGACATCTCTGGAAATTGGGTTCAACCAATAATTTATAGCTCACAGGATGACTGGTCTTCTAATTTGAAAACAATCCTTGAATGGTCGCCCTTTGGATCAAAGGAAGATCTCTTGCAACAGTTTGAGGACATTGGAGCTCATGGAACAAAAATAATCGTATACAACTTGTGGCTAAATGATGAAGGCGTATATGAATTGAGTTTTGATGATGATGATGAGGATATACGGTTGAGAGATGAAGCTAACCATGGGAATTTGACCAAGTTAAACAAAAAAACAGTTGACCTACAAAACCATGTGTCATATCGTCTCCGCTATTCATTGAGGGCATATGCTTCCATTCTGTACCTCAGAAAATTCACAAACTTCCAAGTCATTATAAGGGGGAAATCTGTACAGCAATATGATATTCAAGATGACTTGATACATGTAAAAGTGATAACATATAGGCCTCAGCTAGCTACCATGTCAAAAGAGGTTTCAGTGGAAACAGCCATTGGATTCACAAAAGAGGCACCTGATCTTGCAGTTAGTGGATTCAATGTGTACCATAAAAATCGCCTCATCAGGCCCTTCTGGAAGGTCACCGCTGATGGTTCATCGAAGGGGAATGGTGTTATTGGAATTCTTGAAGCAAACTTTATAGAGCCAGCACATGATAAGCAGGACTTTGAGAGATCGTCATTGTTTATCCGTCTCGAAACTAGGCTGAAACAAATGGTAATGGATTATTGGAAATGCCATTGTCACTTTGTGGGCTATCAACCTCTTATTCCTAGTGAGCTTAAGCTGCACAGGGAACGTGCTGTTAAATCTTCTGGGGGACCAACACCTATTGATGTCGATACGAGTGATGATGGGCAGCATAGTCCACAAGAAGTAGTGATGTCTGATGGCAATACAGAGGGCATGTCAGTTGAGGAGATATGTGAGGAAAATATACAACTCTTCATGAGGTATGAGGAACATGTGAAGAAGGAGGATGAGTTGAAGCAGACGGTTAACAACCTAAAGAAGGAGCTAGAGTTTGCCAAAAGGAAGAAGGATCAACTTGCTGCATATCTAGAGATCAAGAGGAAGCAAAAGGCAACGCAGCCTGGTAGTGCCCAGACCAATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009639 GO:0009791 GO:0009889 GO:0009900 GO:0009908 GO:0010029 GO:0010047 GO:0010114 GO:0010154 GO:0010187 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048511 GO:0048519 GO:0048580 GO:0048581 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1900140 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

589

Amino Acids

66.05

Weight (kDa)

6.59

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	92 - 202	4e-14	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5	PF17942	322 - 461	8.9e-62	Morc6 ribosomal protein S5 domain 2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36930
fragaria_vesca	FvH4_1g16230 FvH4_1g16230 FvH4_1g16230 FvH4_1g16230
malus_domestica	MD02G1174600.v1.1 MD15G1285600.v1.1
prunus_persica	Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1 Prupe.7G131400_v2.0.a1
pyrus_communis	pycom02g14090 pycom15g24860
rosa_chinensis	RchiOBHm_Chr2g0105931
rosa_laevigata	RLG00000017471
rosa_multiflora	Rmu_sc0004367.1_g000014
rosa_roxburghii	Rroxscaffold_2G00137560 Rroxscaffold_2G00137710
rosa_rugosa	Rorug02G0132100 Rorug02G0132200 Rorug02G0132300
rosa_samantha	Rh2AG182600 Rh2BG192600 Rh2CG187200 Rh2DG189200
rosa_wichuraiana	Rw2G014330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1028
AccB1I	GGYRCC	1 cut(s)	1162
AccBSI	CCGCTC	1 cut(s)	35
AccI	GTMKAC	2 cut(s)	5, 807
AccII	CGCG	3 cut(s)	77, 221, 223
AccIII	TCCGGA	1 cut(s)	415
AclWI	GGATC	2 cut(s)	751, 1701
AcoI	YGGCCR	3 cut(s)	30, 114, 188
AcsI	RAATTY	3 cut(s)	901, 1004, 1272
AcyI	GRCGYC	1 cut(s)	80
AdeI	CACNNNGTG	1 cut(s)	1402
AfaI	GTAC	4 cut(s)	508, 995, 1044, 1196
AfiI	CCNNNNNNNGG	3 cut(s)	109, 186, 1663
AflII	CTTAAG	1 cut(s)	1433
AflIII	ACRYGT	2 cut(s)	1075, 1615
AgsI	TTSAA	8 cut(s)	499, 671, 715, 728, 1061, 1189, 1280, 1639
AjnI	CCWGG	1 cut(s)	1744
AjuI	GAANNNNNNNTTGG	4 cut(s)	194, 226, 1128, 1160
AloI	GAACNNNNNNTCC	2 cut(s)	651, 683
Alw21I	GWGCWC	3 cut(s)	28, 48, 787
Alw26I	GTCTC	5 cut(s)	198, 428, 508, 962, 1349
AlwI	GGATC	2 cut(s)	751, 1701
Aor13HI	TCCGGA	1 cut(s)	415
AoxI	GGCC	6 cut(s)	30, 114, 175, 188, 1097, 1217
ApaI	GGGCCC	1 cut(s)	179
ApeKI	GCWGC	6 cut(s)	54, 124, 1438, 1510, 1703, 1741
ApoI	RAATTY	3 cut(s)	901, 1004, 1272
AspLEI	GCGC	1 cut(s)	223
AspS9I	GGNCC	4 cut(s)	175, 176, 1218, 1472
AsuHPI	GGTGA	1 cut(s)	1225
AsuNHI	GCTAGC	1 cut(s)	1105
AvaII	GGWCC	1 cut(s)	1472
BaeGI	GKGCMC	2 cut(s)	179, 1756
BanI	GGYRCC	1 cut(s)	1162
BanII	GRGCYC	4 cut(s)	28, 48, 179, 787
BarI	GAAGNNNNNNTAC	2 cut(s)	550, 582
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	1 cut(s)	696
Bbv12I	GWGCWC	3 cut(s)	28, 48, 787
BbvCI	CCTCAGC	1 cut(s)	1101
BbvI	GCAGC	6 cut(s)	66, 136, 1425, 1522, 1690, 1753
BccI	CCATC	6 cut(s)	237, 392, 539, 1235, 1499, 1535
BceAI	ACGGC	2 cut(s)	101, 175
BciT130I	CCWGG	1 cut(s)	1746
BcoDI	GTCTC	5 cut(s)	198, 428, 508, 962, 1349
BfaI	CTAG	6 cut(s)	518, 1106, 1353, 1425, 1670, 1712
BfrI	CTTAAG	1 cut(s)	1433
BglII	AGATCT	1 cut(s)	754
BlpI	GCTNAGC	1 cut(s)	288
BmcAI	AGTACT	1 cut(s)	508
Bme1390I	CCNGG	1 cut(s)	1746
Bme18I	GGWCC	1 cut(s)	1472
BmgT120I	GGNCC	4 cut(s)	175, 176, 1218, 1472
BmiI	GGNNCC	5 cut(s)	177, 178, 280, 1164, 1473
BmrFI	CCNGG	1 cut(s)	1746
BmrI	ACTGGG	1 cut(s)	621
BmsI	GCATC	1 cut(s)	517
BmtI	GCTAGC	1 cut(s)	1109
BmuI	ACTGGG	1 cut(s)	621
BpiI	GAAGAC	1 cut(s)	696
Bpu10I	CCTNAGC	1 cut(s)	1101
Bpu1102I	GCTNAGC	1 cut(s)	288
BpuEI	CTTGAG	1 cut(s)	344
BsaHI	GRCGYC	1 cut(s)	80
BsaI	GGTCTC	1 cut(s)	428
BsaJI	CCNNGG	1 cut(s)	895
BsaWI	WCCGGW	2 cut(s)	37, 415
BsaXI	ACNNNNNCTCC	4 cut(s)	1619, 1649, 1658, 1688
Bsc4I	CCNNNNNNNGG	3 cut(s)	109, 186, 1663
Bse118I	RCCGGY	2 cut(s)	106, 158
Bse1I	ACTGG	2 cut(s)	616, 704
Bse3DI	GCAATG	1 cut(s)	282
BseAI	TCCGGA	1 cut(s)	415
BseBI	CCWGG	1 cut(s)	1746
BseDI	CCNNGG	1 cut(s)	895
BseGI	GGATG	5 cut(s)	229, 414, 625, 700, 1636
BseLI	CCNNNNNNNGG	3 cut(s)	109, 186, 1663
BseMI	GCAATG	1 cut(s)	282
BseMII	CTCAG	3 cut(s)	279, 1012, 1115
BseNI	ACTGG	2 cut(s)	616, 704
BseRI	GAGGAG	1 cut(s)	1583
BseSI	GKGCMC	2 cut(s)	179, 1756
BseX3I	CGGCCG	3 cut(s)	30, 114, 188
BseXI	GCAGC	6 cut(s)	66, 136, 1425, 1522, 1690, 1753
BsgI	GTGCAG	1 cut(s)	1424
Bsh1236I	CGCG	3 cut(s)	77, 221, 223
Bsh1285I	CGRYCG	3 cut(s)	33, 117, 191
BshFI	GGCC	6 cut(s)	32, 116, 177, 190, 1099, 1219
BshNI	GGYRCC	1 cut(s)	1162
BsiEI	CGRYCG	3 cut(s)	33, 117, 191
BsiHKAI	GWGCWC	3 cut(s)	28, 48, 787
BsiSI	CCGG	6 cut(s)	29, 38, 107, 159, 377, 416
BslFI	GGGAC	1 cut(s)	1485
BslI	CCNNNNNNNGG	3 cut(s)	109, 186, 1663
BsmAI	GTCTC	5 cut(s)	198, 428, 508, 962, 1349
BsmBI	CGTCTC	3 cut(s)	198, 962, 1349
BsmFI	GGGAC	1 cut(s)	1485
BsnI	GGCC	6 cut(s)	32, 116, 177, 190, 1099, 1219
Bso31I	GGTCTC	1 cut(s)	428
Bsp120I	GGGCCC	1 cut(s)	175
Bsp1286I	GDGCHC	5 cut(s)	28, 48, 179, 787, 1756
Bsp13I	TCCGGA	1 cut(s)	415
Bsp1407I	TGTACA	1 cut(s)	1042
Bsp143I	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
Bsp1720I	GCTNAGC	1 cut(s)	288
Bsp19I	CCATGG	1 cut(s)	895
BspANI	GGCC	6 cut(s)	32, 116, 177, 190, 1099, 1219
BspCNI	CTCAG	3 cut(s)	280, 1011, 1114
BspEI	TCCGGA	1 cut(s)	415
BspFNI	CGCG	3 cut(s)	77, 221, 223
BspHI	TCATGA	1 cut(s)	1599
BspLI	GGNNCC	5 cut(s)	177, 178, 280, 1164, 1473
BspOI	GCTAGC	1 cut(s)	1109
BspPI	GGATC	2 cut(s)	751, 1701
BspT107I	GGYRCC	1 cut(s)	1162
BspTI	CTTAAG	1 cut(s)	1433
BspTNI	GGTCTC	1 cut(s)	428
BsrBI	CCGCTC	1 cut(s)	35
BsrDI	GCAATG	1 cut(s)	282
BsrFI	RCCGGY	2 cut(s)	106, 158
BsrGI	TGTACA	1 cut(s)	1042
BsrI	ACTGG	2 cut(s)	616, 704
BssAI	RCCGGY	2 cut(s)	106, 158
BssECI	CCNNGG	1 cut(s)	895
BssMI	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
BssNAI	GTATAC	1 cut(s)	808
BssNI	GRCGYC	1 cut(s)	80
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	1 cut(s)	895
Bst1107I	GTATAC	1 cut(s)	808
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	1 cut(s)	1746
Bst4CI	ACNGT	4 cut(s)	768, 876, 928, 1648
Bst6I	CTCTTC	1 cut(s)	1601
BstACI	GRCGYC	1 cut(s)	80
BstAFI	CTTAAG	1 cut(s)	1433
BstAUI	TGTACA	1 cut(s)	1042
BstC8I	GCNNGC	4 cut(s)	108, 160, 1107, 1299
BstDEI	CTNAG	3 cut(s)	288, 998, 1101
BstDSI	CCRYGG	1 cut(s)	895
BstEII	GGTNACC	1 cut(s)	1231
BstENI	CCTNNNNNAGG	1 cut(s)	1661
BstF5I	GGATG	5 cut(s)	229, 414, 625, 700, 1636
BstFNI	CGCG	3 cut(s)	77, 221, 223
BstHHI	GCGC	1 cut(s)	223
BstKTI	GATC	7 cut(s)	358, 746, 757, 1171, 1328, 1696, 1719
BstMAI	GTCTC	5 cut(s)	198, 428, 508, 962, 1349
BstMBI	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
BstMCI	CGRYCG	3 cut(s)	33, 117, 191
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 278, 1438
BstNI	CCWGG	1 cut(s)	1746
BstNSI	RCATGY	3 cut(s)	1079, 1561, 1619
BstPI	GGTNACC	1 cut(s)	1231
BstSCI	CCNGG	1 cut(s)	1744
BstSLI	GKGCMC	2 cut(s)	179, 1756
BstUI	CGCG	3 cut(s)	77, 221, 223
BstV1I	GCAGC	6 cut(s)	66, 136, 1425, 1522, 1690, 1753
BstV2I	GAAGAC	1 cut(s)	696
BstX2I	RGATCY	1 cut(s)	754
BstXI	CCANNNNNNTGG	1 cut(s)	578
BstYI	RGATCY	1 cut(s)	754
BstZ17I	GTATAC	1 cut(s)	808
BstZI	CGGCCG	3 cut(s)	30, 114, 188
BsuRI	GGCC	6 cut(s)	32, 116, 177, 190, 1099, 1219
BtgI	CCRYGG	1 cut(s)	895
BtsCI	GGATG	5 cut(s)	229, 414, 625, 700, 1636
BtsIMutI	CAGTG	2 cut(s)	346, 1137
Cac8I	GCNNGC	4 cut(s)	108, 160, 1107, 1299
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	1 cut(s)	223
Cfr10I	RCCGGY	2 cut(s)	106, 158
Cfr13I	GGNCC	4 cut(s)	175, 176, 1218, 1472
CseI	GACGC	1 cut(s)	88
Csp6I	GTAC	4 cut(s)	507, 994, 1043, 1195
CviQI	GTAC	4 cut(s)	507, 994, 1043, 1195
DdeI	CTNAG	3 cut(s)	288, 998, 1101
DpnI	GATC	7 cut(s)	357, 745, 756, 1170, 1327, 1695, 1718
DpnII	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
DraIII	CACNNNGTG	1 cut(s)	1402
EaeI	YGGCCR	3 cut(s)	30, 114, 188
EagI	CGGCCG	3 cut(s)	30, 114, 188
Eam1104I	CTCTTC	1 cut(s)	1601
EarI	CTCTTC	1 cut(s)	1601
Ecl136II	GAGCTC	3 cut(s)	26, 46, 785
EclXI	CGGCCG	3 cut(s)	30, 114, 188
Eco130I	CCWWGG	1 cut(s)	895
Eco147I	AGGCCT	1 cut(s)	1099
Eco24I	GRGCYC	4 cut(s)	28, 48, 179, 787
Eco31I	GGTCTC	1 cut(s)	428
Eco47I	GGWCC	1 cut(s)	1472
Eco52I	CGGCCG	3 cut(s)	30, 114, 188
Eco53kI	GAGCTC	3 cut(s)	26, 46, 785
Eco91I	GGTNACC	1 cut(s)	1231
EcoICRI	GAGCTC	3 cut(s)	26, 46, 785
EcoNI	CCTNNNNNAGG	1 cut(s)	1661
EcoO109I	RGGNCCY	2 cut(s)	176, 1218
EcoO65I	GGTNACC	1 cut(s)	1231
EcoRI	GAATTC	1 cut(s)	1272
EcoRII	CCWGG	1 cut(s)	1744
EcoT14I	CCWWGG	1 cut(s)	895
EcoT22I	ATGCAT	1 cut(s)	437
EcoT38I	GRGCYC	4 cut(s)	28, 48, 179, 787
ErhI	CCWWGG	1 cut(s)	895
Esp3I	CGTCTC	3 cut(s)	198, 962, 1349
FalI	AAGNNNNNCTT	2 cut(s)	1301, 1333
FaqI	GGGAC	1 cut(s)	1485
FauI	CCCGC	1 cut(s)	111
FauNDI	CATATG	1 cut(s)	979
FblI	GTMKAC	2 cut(s)	5, 807
FokI	GGATG	5 cut(s)	216, 421, 632, 707, 1643
FriOI	GRGCYC	4 cut(s)	28, 48, 179, 787
FspBI	CTAG	6 cut(s)	518, 1106, 1353, 1425, 1670, 1712
GlaI	GCGC	1 cut(s)	222
HaeIII	GGCC	6 cut(s)	32, 116, 177, 190, 1099, 1219
HapII	CCGG	6 cut(s)	29, 38, 107, 159, 377, 416
HgaI	GACGC	1 cut(s)	88
HhaI	GCGC	1 cut(s)	223
Hin1I	GRCGYC	1 cut(s)	80
Hin6I	GCGC	1 cut(s)	221
HinP1I	GCGC	1 cut(s)	221
HincII	GTYRAC	3 cut(s)	6, 931, 1651
HindII	GTYRAC	3 cut(s)	6, 931, 1651
HinfI	GANTC	5 cut(s)	225, 412, 495, 1149, 1185
HpaI	GTTAAC	1 cut(s)	1651
HpaII	CCGG	6 cut(s)	29, 38, 107, 159, 377, 416
HphI	GGTGA	1 cut(s)	1225
Hpy166II	GTNNAC	6 cut(s)	6, 808, 931, 1195, 1520, 1651
Hpy188I	TCNGA	3 cut(s)	392, 1001, 1540
Hpy8I	GTNNAC	6 cut(s)	6, 808, 931, 1195, 1520, 1651
Hpy99I	CGWCG	4 cut(s)	62, 65, 82, 122
HpyAV	CCTTC	9 cut(s)	13, 413, 824, 1222, 1231, 1246, 1618, 1657, 1684
HpyCH4III	ACNGT	4 cut(s)	768, 876, 928, 1648
HpyCH4IV	ACGT	2 cut(s)	596, 1450
HpyCH4V	TGCA	6 cut(s)	435, 548, 763, 1175, 1441, 1706
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 278, 1438
HpyF3I	CTNAG	3 cut(s)	288, 998, 1101
HpySE526I	ACGT	2 cut(s)	596, 1450
Hsp92I	GRCGYC	1 cut(s)	80
HspAI	GCGC	1 cut(s)	221
Kpn2I	TCCGGA	1 cut(s)	415
KroI	GCCGGC	2 cut(s)	106, 158
KroNI	GCCGGC	2 cut(s)	108, 160
KspAI	GTTAAC	1 cut(s)	1651
Kzo9I	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
LmnI	GCTCC	6 cut(s)	23, 31, 40, 278, 782, 1666
Lsp1109I	GCAGC	6 cut(s)	66, 136, 1425, 1522, 1690, 1753
LweI	GCATC	1 cut(s)	517
MaeI	CTAG	6 cut(s)	518, 1106, 1353, 1425, 1670, 1712
MaeII	ACGT	2 cut(s)	596, 1450
MaeIII	GTNAC	2 cut(s)	1231, 1394
MalI	GATC	7 cut(s)	357, 745, 756, 1170, 1327, 1695, 1718
MbiI	CCGCTC	1 cut(s)	35
MboI	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
MboII	GAAGA	8 cut(s)	106, 233, 696, 764, 1455, 1588, 1633, 1699
MfeI	CAATTG	1 cut(s)	209
MflI	RGATCY	1 cut(s)	754
MhlI	GDGCHC	5 cut(s)	28, 48, 179, 787, 1756
MluCI	AATT	8 cut(s)	209, 661, 678, 709, 842, 901, 1004, 1272
MlyI	GAGTC	1 cut(s)	234
MmeI	TCCRAC	1 cut(s)	276
Mph1103I	ATGCAT	1 cut(s)	437
MreI	CGCCGGCG	1 cut(s)	106
MroI	TCCGGA	1 cut(s)	415
MroNI	GCCGGC	2 cut(s)	106, 158
MseI	TTAA	4 cut(s)	914, 1434, 1458, 1650
MslI	CAYNNNNRTG	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	1238
MspCI	CTTAAG	1 cut(s)	1433
MspI	CCGG	6 cut(s)	29, 38, 107, 159, 377, 416
MspR9I	CCNGG	1 cut(s)	1746
MunI	CAATTG	1 cut(s)	209
MvaI	CCWGG	1 cut(s)	1746
MvnI	CGCG	3 cut(s)	77, 221, 223
MwoI	GCNNNNNNNGC	3 cut(s)	32, 278, 1438
NaeI	GCCGGC	2 cut(s)	108, 160
NcoI	CCATGG	1 cut(s)	895
NdeI	CATATG	1 cut(s)	979
NdeII	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
NgoMIV	GCCGGC	2 cut(s)	106, 158
NheI	GCTAGC	1 cut(s)	1105
NlaIV	GGNNCC	5 cut(s)	177, 178, 280, 1164, 1473
NmuCI	GTSAC	2 cut(s)	1231, 1394
NsiI	ATGCAT	1 cut(s)	437
NspI	RCATGY	3 cut(s)	1079, 1561, 1619
PagI	TCATGA	1 cut(s)	1599
PceI	AGGCCT	1 cut(s)	1099
PciI	ACATGT	2 cut(s)	1075, 1615
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 550
PdiI	GCCGGC	2 cut(s)	108, 160
PfeI	GAWTC	4 cut(s)	412, 495, 1149, 1185
PleI	GAGTC	1 cut(s)	233
PpsI	GAGTC	1 cut(s)	233
PscI	ACATGT	2 cut(s)	1075, 1615
PsiI	TTATAA	1 cut(s)	1028
Psp124BI	GAGCTC	3 cut(s)	28, 48, 787
Psp6I	CCWGG	1 cut(s)	1744
PspEI	GGTNACC	1 cut(s)	1231
PspGI	CCWGG	1 cut(s)	1744
PspN4I	GGNNCC	5 cut(s)	177, 178, 280, 1164, 1473
PspOMI	GGGCCC	1 cut(s)	175
PspPI	GGNCC	4 cut(s)	175, 176, 1218, 1472
PsuI	RGATCY	1 cut(s)	754
RsaI	GTAC	4 cut(s)	508, 995, 1044, 1196
RsaNI	GTAC	4 cut(s)	507, 994, 1043, 1195
RseI	CAYNNNNRTG	1 cut(s)	249
SacI	GAGCTC	3 cut(s)	28, 48, 787
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	4 cut(s)	914, 1434, 1458, 1650
Sau3AI	GATC	7 cut(s)	355, 743, 754, 1168, 1325, 1693, 1716
Sau96I	GGNCC	4 cut(s)	175, 176, 1218, 1472
ScaI	AGTACT	1 cut(s)	508
SchI	GAGTC	1 cut(s)	234
ScrFI	CCNGG	1 cut(s)	1746
SduI	GDGCHC	5 cut(s)	28, 48, 179, 787, 1756
SfaNI	GCATC	1 cut(s)	517
SgrAI	CRCCGGYG	1 cut(s)	106
SinI	GGWCC	1 cut(s)	1472
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	2 cut(s)	359, 1433
SmoI	CTYRAG	2 cut(s)	359, 1433
Sse9I	AATT	8 cut(s)	209, 661, 678, 709, 842, 901, 1004, 1272
SseBI	AGGCCT	1 cut(s)	1099
SspMI	CTAG	6 cut(s)	518, 1106, 1353, 1425, 1670, 1712
SstI	GAGCTC	3 cut(s)	28, 48, 787
StuI	AGGCCT	1 cut(s)	1099
StyD4I	CCNGG	1 cut(s)	1744
StyI	CCWWGG	1 cut(s)	895
TaaI	ACNGT	4 cut(s)	768, 876, 928, 1648
TaiI	ACGT	2 cut(s)	599, 1453
TaqI	TCGA	6 cut(s)	5, 17, 48, 1250, 1347, 1491
TasI	AATT	8 cut(s)	209, 661, 678, 709, 842, 901, 1004, 1272
TatI	WGTACW	2 cut(s)	506, 1042
TauI	GCSGC	6 cut(s)	35, 74, 77, 113, 116, 190
TfiI	GAWTC	4 cut(s)	412, 495, 1149, 1185
Tru1I	TTAA	4 cut(s)	914, 1434, 1458, 1650
Tru9I	TTAA	4 cut(s)	914, 1434, 1458, 1650
TscAI	CASTG	2 cut(s)	346, 1137
TseFI	GTSAC	2 cut(s)	1231, 1394
TseI	GCWGC	6 cut(s)	54, 124, 1438, 1510, 1703, 1741
Tsp45I	GTSAC	2 cut(s)	1231, 1394
TspDTI	ATGAA	8 cut(s)	233, 425, 843, 855, 900, 957, 1236, 1588
TspGWI	ACGGA	2 cut(s)	619, 1331
TspRI	CASTG	2 cut(s)	346, 1137
Vha464I	CTTAAG	1 cut(s)	1433
VpaK11BI	GGWCC	1 cut(s)	1472
XagI	CCTNNNNNAGG	1 cut(s)	1661
XapI	RAATTY	3 cut(s)	901, 1004, 1272
XbaI	TCTAGA	1 cut(s)	1711
XceI	RCATGY	3 cut(s)	1079, 1561, 1619
XmiI	GTMKAC	2 cut(s)	5, 807
XspI	CTAG	6 cut(s)	518, 1106, 1353, 1425, 1670, 1712
ZrmI	AGTACT	1 cut(s)	508
Zsp2I	ATGCAT	1 cut(s)	437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.