Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009816

Physical Location & Seq

Genomic Coordinates Reverse (-)

15260456 .. 15262226

Gene Structure 1771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G135000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 600 bp

ATGGAGGTGGCTCGAGTCGCCACGTCAGCGACGGCGAAGAAGAAGAGGAAGGTCAACACGAACGGAGAATCCGTCGAATTGCCGTCTTCGTATGCTCAGCTGAAGAAGCCGAGACGACTCGTCGTAAGTGGCGCGTCGAAAATTGCGGCGGCAGAGGGTGTGCGGGAAGCGGACGAGGACGTTTCGACGTCGGATCACGTCGAGACCTCTTGTTGCTCGAGTAACGGCTCGAGTGAGCTGGTGCATGATGGAGACATAAAATTCGTAGATCTGAAGGTGAACGATTTAATTGAAAAGGAGAGTGAACAGGTCGGGTCGTGGAAGTATAATTCAAGCAGAGAAAGGAGAGAGATGACGGCGCCTATGAGCGGGCTTCAAGCCGAAGCAGAATTCGAGGAAGTAGAATCCACAGTGACGGTGAGGTCGAAGGACACCGACTCTAGACGAAGATCAGCACCACCTATCGAGTCAGAGCTTGAAGAATTCTTCGCAGCCGCCGAGAAAAACATCCAAAAACAATTTATGGAAAGGTATAATTATGATATTGCCAAGGACGAGCCGATGGAAGGACGGTACGAGTGGGTTCGATTAACGCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0001673 GO:0001932 GO:0001933 GO:0003674 GO:0004857 GO:0004860 GO:0004861 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006469 GO:0008150 GO:0009892 GO:0010563 GO:0010605 GO:0016538 GO:0019207 GO:0019210 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0030291 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0033673 GO:0042325 GO:0042326 GO:0043073 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044092 GO:0044424 GO:0044464 GO:0045736 GO:0045786 GO:0045859 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071900 GO:0071901 GO:0080090 GO:0098772 GO:1904029 GO:1904030

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDI

Protein Analysis

200

Amino Acids

22.35

Weight (kDa)

5.07

Isoelectric Point (pI)

54.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23430
fragaria_vesca	FvH4_1g15820 FvH4_1g15820 FvH4_1g15820
malus_domestica	MD00G1044500.v1.1 MD02G1170300.v1.1
prunus_persica	Prupe.7G135000_v2.0.a1 Prupe.7G135000_v2.0.a1
pyrus_communis	pycom15g24530
rosa_chinensis	RchiOBHm_Chr2g0105111
rosa_laevigata	RLG00000017404
rosa_multiflora	Rmu_sc0006734.1_g000001 Rmu_sc0023500.1_g000001
rosa_roxburghii	Rroxscaffold_2G00131630 Rroxscaffold_2G00138410
rosa_rugosa	Rorug02G0126300
rosa_samantha	Rh2AG177200 Rh2BG185200 Rh2CG181600 Rh2DG183300
rosa_wichuraiana	Rw2G013900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	421
AatII	GACGTC	1 cut(s)	191
AccB1I	GGYRCC	1 cut(s)	358
AccBSI	CCGCTC	1 cut(s)	369
AccII	CGCG	1 cut(s)	134
AciI	CCGC	6 cut(s)	146, 149, 163, 170, 369, 495
AclWI	GGATC	1 cut(s)	201
AcsI	RAATTY	3 cut(s)	260, 389, 482
AcuI	CTGAAG	2 cut(s)	122, 293
AcyI	GRCGYC	2 cut(s)	188, 359
AfaI	GTAC	1 cut(s)	575
AfiI	CCNNNNNNNGG	2 cut(s)	368, 566
AgsI	TTSAA	4 cut(s)	293, 333, 377, 479
AhdI	GACNNNNNGTC	1 cut(s)	119
AjiI	CACGTC	2 cut(s)	24, 199
AloI	GAACNNNNNNTCC	2 cut(s)	53, 85
AluBI	AGCT	3 cut(s)	100, 238, 475
AluI	AGCT	3 cut(s)	100, 238, 475
Alw26I	GTCTC	3 cut(s)	106, 197, 246
AlwI	GGATC	1 cut(s)	201
Ama87I	CYCGRG	3 cut(s)	12, 217, 229
ApeKI	GCWGC	1 cut(s)	491
ApoI	RAATTY	3 cut(s)	260, 389, 482
ArsI	GACNNNNNNTTYG	2 cut(s)	245, 277
AspLEI	GCGC	2 cut(s)	134, 361
AsuHPI	GGTGA	2 cut(s)	289, 430
AvaI	CYCGRG	3 cut(s)	12, 217, 229
BanI	GGYRCC	1 cut(s)	358
BbsI	GAAGAC	1 cut(s)	78
BbvI	GCAGC	1 cut(s)	503
BccI	CCATC	2 cut(s)	242, 556
BceAI	ACGGC	5 cut(s)	48, 67, 241, 372, 580
BcoDI	GTCTC	3 cut(s)	106, 197, 246
BfaI	CTAG	1 cut(s)	441
BfoI	RGCGCY	1 cut(s)	362
BglII	AGATCT	1 cut(s)	268
BisI	GCNGC	4 cut(s)	147, 150, 492, 495
BlpI	GCTNAGC	1 cut(s)	96
BlsI	GCNGC	4 cut(s)	148, 151, 493, 496
BmeRI	GACNNNNNGTC	1 cut(s)	119
BmeT110I	CYCGRG	3 cut(s)	12, 217, 229
BmgBI	CACGTC	2 cut(s)	24, 199
BmiI	GGNNCC	1 cut(s)	360
BpiI	GAAGAC	1 cut(s)	78
Bpu1102I	GCTNAGC	1 cut(s)	96
BsaHI	GRCGYC	2 cut(s)	188, 359
BsaI	GGTCTC	1 cut(s)	197
BsaJI	CCNNGG	1 cut(s)	549
BsaXI	ACNNNNNCTCC	2 cut(s)	57, 87
Bsc4I	CCNNNNNNNGG	2 cut(s)	368, 566
BseDI	CCNNGG	1 cut(s)	549
BseGI	GGATG	1 cut(s)	507
BseLI	CCNNNNNNNGG	2 cut(s)	368, 566
BseMII	CTCAG	1 cut(s)	110
BseXI	GCAGC	1 cut(s)	503
Bsh1236I	CGCG	1 cut(s)	134
BshNI	GGYRCC	1 cut(s)	358
BsiHKCI	CYCGRG	3 cut(s)	12, 217, 229
BslI	CCNNNNNNNGG	2 cut(s)	368, 566
BsmAI	GTCTC	3 cut(s)	106, 197, 246
BsmBI	CGTCTC	1 cut(s)	106
Bso31I	GGTCTC	1 cut(s)	197
BsoBI	CYCGRG	3 cut(s)	12, 217, 229
Bsp143I	GATC	3 cut(s)	193, 268, 449
Bsp1720I	GCTNAGC	1 cut(s)	96
BspACI	CCGC	6 cut(s)	146, 149, 163, 170, 369, 495
BspCNI	CTCAG	1 cut(s)	109
BspFNI	CGCG	1 cut(s)	134
BspLI	GGNNCC	1 cut(s)	360
BspPI	GGATC	1 cut(s)	201
BspT107I	GGYRCC	1 cut(s)	358
BspTNI	GGTCTC	1 cut(s)	197
BsrBI	CCGCTC	1 cut(s)	369
BssECI	CCNNGG	1 cut(s)	549
BssMI	GATC	3 cut(s)	193, 268, 449
BssNI	GRCGYC	2 cut(s)	188, 359
BssT1I	CCWWGG	1 cut(s)	549
Bst4CI	ACNGT	3 cut(s)	412, 418, 573
Bst6I	CTCTTC	1 cut(s)	38
BstACI	GRCGYC	2 cut(s)	188, 359
BstC8I	GCNNGC	1 cut(s)	371
BstDEI	CTNAG	1 cut(s)	96
BstF5I	GGATG	1 cut(s)	507
BstFNI	CGCG	1 cut(s)	134
BstH2I	RGCGCY	1 cut(s)	362
BstHHI	GCGC	2 cut(s)	134, 361
BstKTI	GATC	3 cut(s)	196, 271, 452
BstMAI	GTCTC	3 cut(s)	106, 197, 246
BstMBI	GATC	3 cut(s)	193, 268, 449
BstMWI	GCNNNNNNNGC	3 cut(s)	17, 26, 106
BstUI	CGCG	1 cut(s)	134
BstV1I	GCAGC	1 cut(s)	503
BstV2I	GAAGAC	1 cut(s)	78
BstX2I	RGATCY	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	268
BtrI	CACGTC	2 cut(s)	24, 199
BtsCI	GGATG	1 cut(s)	507
BtsIMutI	CAGTG	1 cut(s)	417
Cac8I	GCNNGC	1 cut(s)	371
CfoI	GCGC	2 cut(s)	134, 361
CseI	GACGC	1 cut(s)	123
Csp6I	GTAC	1 cut(s)	574
CviAII	CATG	1 cut(s)	245
CviQI	GTAC	1 cut(s)	574
DdeI	CTNAG	1 cut(s)	96
DinI	GGCGCC	1 cut(s)	360
DpnI	GATC	3 cut(s)	195, 270, 451
DpnII	GATC	3 cut(s)	193, 268, 449
DrdI	GACNNNNNNGTC	1 cut(s)	421
DriI	GACNNNNNGTC	1 cut(s)	119
DseDI	GACNNNNNNGTC	1 cut(s)	421
Eam1104I	CTCTTC	1 cut(s)	38
Eam1105I	GACNNNNNGTC	1 cut(s)	119
EarI	CTCTTC	1 cut(s)	38
Eco130I	CCWWGG	1 cut(s)	549
Eco31I	GGTCTC	1 cut(s)	197
Eco57I	CTGAAG	2 cut(s)	122, 293
Eco88I	CYCGRG	3 cut(s)	12, 217, 229
EcoRI	GAATTC	2 cut(s)	389, 482
EcoT14I	CCWWGG	1 cut(s)	549
EgeI	GGCGCC	1 cut(s)	360
EheI	GGCGCC	1 cut(s)	360
ErhI	CCWWGG	1 cut(s)	549
Esp3I	CGTCTC	1 cut(s)	106
FaeI	CATG	1 cut(s)	248
FaiI	YATR	8 cut(s)	93, 246, 257, 327, 365, 524, 534, 540
FatI	CATG	1 cut(s)	244
FauI	CCCGC	2 cut(s)	156, 362
Fnu4HI	GCNGC	4 cut(s)	147, 150, 492, 495
FokI	GGATG	1 cut(s)	494
Fsp4HI	GCNGC	4 cut(s)	147, 150, 492, 495
FspBI	CTAG	1 cut(s)	441
GlaI	GCGC	2 cut(s)	133, 360
GluI	GCNGC	4 cut(s)	147, 150, 492, 495
HaeII	RGCGCY	1 cut(s)	362
HgaI	GACGC	1 cut(s)	123
HhaI	GCGC	2 cut(s)	134, 361
Hin1I	GRCGYC	2 cut(s)	188, 359
Hin1II	CATG	1 cut(s)	248
Hin6I	GCGC	2 cut(s)	132, 359
HinP1I	GCGC	2 cut(s)	132, 359
HincII	GTYRAC	1 cut(s)	55
HindII	GTYRAC	1 cut(s)	55
HinfI	GANTC	6 cut(s)	15, 68, 117, 404, 437, 467
HphI	GGTGA	2 cut(s)	289, 430
Hpy166II	GTNNAC	3 cut(s)	55, 280, 305
Hpy188I	TCNGA	3 cut(s)	193, 273, 472
Hpy188III	TCNNGA	2 cut(s)	202, 441
Hpy8I	GTNNAC	3 cut(s)	55, 280, 305
Hpy99I	CGWCG	7 cut(s)	34, 77, 125, 139, 190, 193, 203
HpyAV	CCTTC	4 cut(s)	43, 268, 421, 560
HpyCH4III	ACNGT	3 cut(s)	412, 418, 573
HpyCH4IV	ACGT	4 cut(s)	23, 180, 188, 198
HpyCH4V	TGCA	1 cut(s)	244
HpyF10VI	GCNNNNNNNGC	3 cut(s)	17, 26, 106
HpyF3I	CTNAG	1 cut(s)	96
HpySE526I	ACGT	4 cut(s)	23, 180, 188, 198
Hsp92I	GRCGYC	2 cut(s)	188, 359
Hsp92II	CATG	1 cut(s)	248
HspAI	GCGC	2 cut(s)	132, 359
KasI	GGCGCC	1 cut(s)	358
Kzo9I	GATC	3 cut(s)	193, 268, 449
LpnPI	CCDG	2 cut(s)	224, 293
Lsp1109I	GCAGC	1 cut(s)	503
MaeI	CTAG	1 cut(s)	441
MaeII	ACGT	4 cut(s)	23, 180, 188, 198
MaeIII	GTNAC	2 cut(s)	221, 412
MalI	GATC	3 cut(s)	195, 270, 451
MbiI	CCGCTC	1 cut(s)	369
MboI	GATC	3 cut(s)	193, 268, 449
MboII	GAAGA	8 cut(s)	49, 52, 55, 78, 115, 459, 478, 491
MflI	RGATCY	1 cut(s)	268
MluCI	AATT	9 cut(s)	77, 141, 260, 288, 328, 389, 482, 518, 535
Mly113I	GGCGCC	1 cut(s)	359
MlyI	GAGTC	4 cut(s)	24, 111, 431, 476
MmeI	TCCRAC	1 cut(s)	171
MnlI	CCTC	6 cut(s)	39, 148, 169, 217, 388, 414
MseI	TTAA	2 cut(s)	287, 590
MspA1I	CMGCKG	1 cut(s)	100
MvnI	CGCG	1 cut(s)	134
MwoI	GCNNNNNNNGC	3 cut(s)	17, 26, 106
NarI	GGCGCC	1 cut(s)	359
NdeII	GATC	3 cut(s)	193, 268, 449
NlaIII	CATG	1 cut(s)	248
NlaIV	GGNNCC	1 cut(s)	360
NmeAIII	GCCGAG	2 cut(s)	135, 523
NmuCI	GTSAC	1 cut(s)	412
PaeR7I	CTCGAG	3 cut(s)	12, 217, 229
PcsI	WCGNNNNNNNCGW	3 cut(s)	69, 422, 495
PfeI	GAWTC	2 cut(s)	68, 404
PkrI	GCNGC	4 cut(s)	148, 151, 493, 496
PleI	GAGTC	4 cut(s)	23, 111, 431, 475
PluTI	GGCGCC	1 cut(s)	362
PpsI	GAGTC	4 cut(s)	23, 111, 431, 475
PspN4I	GGNNCC	1 cut(s)	360
PspXI	VCTCGAGB	3 cut(s)	12, 217, 229
PsuI	RGATCY	1 cut(s)	268
PvuII	CAGCTG	1 cut(s)	100
RsaI	GTAC	1 cut(s)	575
RsaNI	GTAC	1 cut(s)	574
SaqAI	TTAA	2 cut(s)	287, 590
SatI	GCNGC	4 cut(s)	147, 150, 492, 495
Sau3AI	GATC	3 cut(s)	193, 268, 449
SchI	GAGTC	4 cut(s)	24, 111, 431, 476
SfoI	GGCGCC	1 cut(s)	360
Sfr274I	CTCGAG	3 cut(s)	12, 217, 229
SlaI	CTCGAG	3 cut(s)	12, 217, 229
SmlI	CTYRAG	3 cut(s)	12, 217, 229
SmoI	CTYRAG	3 cut(s)	12, 217, 229
Sse9I	AATT	9 cut(s)	77, 141, 260, 288, 328, 389, 482, 518, 535
SsiI	CCGC	6 cut(s)	146, 149, 163, 170, 369, 495
SspDI	GGCGCC	1 cut(s)	358
SspMI	CTAG	1 cut(s)	441
StyI	CCWWGG	1 cut(s)	549
TaaI	ACNGT	3 cut(s)	412, 418, 573
TaiI	ACGT	4 cut(s)	26, 183, 191, 201
TasI	AATT	9 cut(s)	77, 141, 260, 288, 328, 389, 482, 518, 535
TauI	GCSGC	3 cut(s)	149, 152, 497
TfiI	GAWTC	2 cut(s)	68, 404
Tru1I	TTAA	2 cut(s)	287, 590
Tru9I	TTAA	2 cut(s)	287, 590
TscAI	CASTG	1 cut(s)	417
TseFI	GTSAC	1 cut(s)	412
TseI	GCWGC	1 cut(s)	491
Tsp45I	GTSAC	1 cut(s)	412
TspGWI	ACGGA	2 cut(s)	61, 78
TspRI	CASTG	1 cut(s)	417
XapI	RAATTY	3 cut(s)	260, 389, 482
XbaI	TCTAGA	1 cut(s)	440
XhoI	CTCGAG	3 cut(s)	12, 217, 229
XspI	CTAG	1 cut(s)	441
ZraI	GACGTC	1 cut(s)	189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.