Prupe.7G156400_v2.0.a1

Tubby-like F-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
16516499 .. 16519116
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G156400.1

Sequence Viewer

Length: 1239 bp
ATGTCGTTCAAAGGCATTGTTCGCGAGCTGAGGGAGATGAAAGATGGAATTGGGAGCATGTCAAAGCGAGTGGGTGACCGGAAGCATTGGCATAGTAGGACGATGTCACATATTGCTCCTGATCTGGCACCAAACCCTCCATCTGATTTGATTCAACAGGGTCAGTGGGCAAATTTACCTCCGGAATTGCTTTTGGACATAATTCAGAGGGTAGAAGAAAGTGAAACCACATGGCCTGCTCGAGCTGTTGTTGTTTCTTGTGCTTCAGTTTGTAAGTCATGGAGGGCAATTGTGAGGGAGATTGTCAAAACTCCTGAGCAATGCGGAAGGCTCACATTTCCAATCTCATTGAAGCAGCCTGGGCCTCGCCAGTCTCCAATACAATGCTTCATTAGAAGGGATAGAGAAACTTCCACATTTTATCTGCACTACGGTCTGGTGCCTTCTGAGGGTGAGAAAGATAAATTATTGTTAGCGGCCAAAAGGATTAGAAGGGCAACAAGCACAGAGTTCATTATATCTTTGGTTGCAGATGATTTTTCTCGAGCCAGCAGTACTTATGTTGGTAAATTGAGATCCAACTTTTTGGGTACCAAGTTCACCGTATATGACAGCCAGCCTCCATGTGATGCAGTACCTCAAACAAATAGTCGATCATCTCGAAGGTTCCATTCTAAGCAGGTATCTCCAAGAGTACCAGCATGTAACTACAGTGTTGGAACCGTTTGTTATGAGCTCAATATTCTCCGCACAAGGGGCCCAAGGAGAATGCACTGTGCCATGCCCTCTATTCCTGTCTCTTCTATTCAGGAGGGGGGCACCGCCCCAACACCAACTTTGTTCTCACAAGCATATGATGAGCACTTTGCTCCCTCACCCTGTTCAACAGTAAAGGAGCTAGTCACTGGTTACAGCTCTATAAACCTCTCTGAGCCACATGTCCAGGGTGCAGAACCGCTGGTTTTGAAAAATAAGTCCCCTAGGTGGCATGAGCAGTTACAGTGCTGGTGCCTTAATTTTAGAGGGCGTGTTACGGTGGCTTCTGTAAAAAATTTCCAGCTTGTTGCAGCTGTTGATCCATCCCACAATGTTTCAGCTGAAGAACAAGAGAGGGTAATCCTACAGTTTGGAAAGATTGGAAAAGACATCTTCACCGTGGATTATCGCTATCCCCTGTCCTCTTTCCAGGCATTTGCAATCTGCTTAAGCAGCTTCGACACCAAGCCAGCTTGTGAATGA

Protein Analysis

413

Amino Acids

46.22

Weight (kDa)

9.19

Isoelectric Point (pI)

62.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010770)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 670
Acc65I GGTACC 1 cut(s) 590
AccB1I GGYRCC 5 cut(s) 127, 439, 590, 818, 1008
AccII CGCG 1 cut(s) 24
AccIII TCCGGA 1 cut(s) 181
AciI CCGC 5 cut(s) 324, 476, 748, 822, 956
AclWI GGATC 2 cut(s) 570, 1070
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 2 cut(s) 172, 1051
AcuI CTGAAG 2 cut(s) 249, 1119
AfaI GTAC 4 cut(s) 556, 592, 636, 696
AfiI CCNNNNNNNGG 3 cut(s) 449, 754, 984
AflII CTTAAG 1 cut(s) 1204
AflIII ACRYGT 1 cut(s) 937
AgsI TTSAA 5 cut(s) 10, 155, 352, 885, 967
AjnI CCWGG 3 cut(s) 358, 942, 1185
Alw21I GWGCWC 2 cut(s) 738, 864
Alw26I GTCTC 2 cut(s) 378, 802
AlwI GGATC 2 cut(s) 570, 1070
Ama87I CYCGRG 2 cut(s) 240, 543
Aor13HI TCCGGA 1 cut(s) 181
AoxI GGCC 4 cut(s) 233, 362, 477, 757
ApaI GGGCCC 1 cut(s) 761
ApeKI GCWGC 3 cut(s) 355, 1067, 1209
ApoI RAATTY 2 cut(s) 172, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 634, 666
Asp718I GGTACC 1 cut(s) 590
AspA2I CCTAGG 1 cut(s) 980
AspS9I GGNCC 3 cut(s) 362, 757, 758
AsuHPI GGTGA 5 cut(s) 86, 464, 592, 867, 1144
AvaI CYCGRG 2 cut(s) 240, 543
AvrII CCTAGG 1 cut(s) 980
BaeGI GKGCMC 2 cut(s) 761, 821
BanI GGYRCC 5 cut(s) 127, 439, 590, 818, 1008
BanII GRGCYC 2 cut(s) 738, 761
Bbv12I GWGCWC 2 cut(s) 738, 864
BbvCI CCTCAGC 1 cut(s) 29
BbvI GCAGC 3 cut(s) 367, 1079, 1221
BccI CCATC 3 cut(s) 38, 148, 1087
BciT130I CCWGG 3 cut(s) 360, 944, 1187
BcoDI GTCTC 2 cut(s) 378, 802
BfaI CTAG 2 cut(s) 899, 981
BfmI CTRYAG 2 cut(s) 709, 1121
BfrI CTTAAG 1 cut(s) 1204
BfuAI ACCTGC 1 cut(s) 670
BisI GCNGC 4 cut(s) 356, 477, 1068, 1210
BlnI CCTAGG 1 cut(s) 980
BlsI GCNGC 4 cut(s) 357, 478, 1069, 1211
BmcAI AGTACT 1 cut(s) 556
Bme1390I CCNGG 3 cut(s) 360, 944, 1187
BmeT110I CYCGRG 2 cut(s) 240, 543
BmgT120I GGNCC 3 cut(s) 362, 757, 758
BmiI GGNNCC 9 cut(s) 129, 441, 592, 668, 721, 758, 759, 820, 1010
BmrFI CCNGG 3 cut(s) 360, 944, 1187
BmsI GCATC 1 cut(s) 619
Bpu10I CCTNAGC 2 cut(s) 29, 315
BsaJI CCNNGG 5 cut(s) 359, 761, 943, 980, 1155
BsaWI WCCGGW 2 cut(s) 78, 181
Bsc4I CCNNNNNNNGG 3 cut(s) 449, 754, 984
Bse1I ACTGG 2 cut(s) 370, 910
Bse3DI GCAATG 1 cut(s) 326
BseAI TCCGGA 1 cut(s) 181
BseBI CCWGG 3 cut(s) 360, 944, 1187
BseDI CCNNGG 5 cut(s) 359, 761, 943, 980, 1155
BseGI GGATG 1 cut(s) 1079
BseLI CCNNNNNNNGG 3 cut(s) 449, 754, 984
BseMI GCAATG 1 cut(s) 326
BseMII CTCAG 4 cut(s) 20, 306, 438, 921
BseNI ACTGG 2 cut(s) 370, 910
BseSI GKGCMC 2 cut(s) 761, 821
BseXI GCAGC 3 cut(s) 367, 1079, 1221
BsgI GTGCAG 2 cut(s) 410, 969
Bsh1236I CGCG 1 cut(s) 24
BshFI GGCC 4 cut(s) 235, 364, 479, 759
BshNI GGYRCC 5 cut(s) 127, 439, 590, 818, 1008
BsiHKAI GWGCWC 2 cut(s) 738, 864
BsiHKCI CYCGRG 2 cut(s) 240, 543
BsiSI CCGG 2 cut(s) 79, 182
BslFI GGGAC 1 cut(s) 961
BslI CCNNNNNNNGG 3 cut(s) 449, 754, 984
BsmAI GTCTC 2 cut(s) 378, 802
BsmFI GGGAC 1 cut(s) 961
BsmI GAATGC 1 cut(s) 774
BsnI GGCC 4 cut(s) 235, 364, 479, 759
BsoBI CYCGRG 2 cut(s) 240, 543
Bsp120I GGGCCC 1 cut(s) 757
Bsp1286I GDGCHC 4 cut(s) 738, 761, 821, 864
Bsp13I TCCGGA 1 cut(s) 181
Bsp143I GATC 4 cut(s) 121, 575, 653, 1075
Bsp68I TCGCGA 1 cut(s) 24
BspACI CCGC 5 cut(s) 324, 476, 748, 822, 956
BspANI GGCC 4 cut(s) 235, 364, 479, 759
BspCNI CTCAG 4 cut(s) 21, 307, 439, 922
BspEI TCCGGA 1 cut(s) 181
BspFNI CGCG 1 cut(s) 24
BspLI GGNNCC 9 cut(s) 129, 441, 592, 668, 721, 758, 759, 820, 1010
BspMI ACCTGC 1 cut(s) 670
BspPI GGATC 2 cut(s) 570, 1070
BspT107I GGYRCC 5 cut(s) 127, 439, 590, 818, 1008
BspTI CTTAAG 1 cut(s) 1204
BsrDI GCAATG 1 cut(s) 326
BsrI ACTGG 2 cut(s) 370, 910
BssECI CCNNGG 5 cut(s) 359, 761, 943, 980, 1155
BssMI GATC 4 cut(s) 121, 575, 653, 1075
BssT1I CCWWGG 2 cut(s) 761, 980
Bst2UI CCWGG 3 cut(s) 360, 944, 1187
Bst6I CTCTTC 1 cut(s) 805
BstAFI CTTAAG 1 cut(s) 1204
BstC8I GCNNGC 5 cut(s) 26, 237, 550, 617, 1227
BstDEI CTNAG 5 cut(s) 29, 315, 447, 675, 930
BstDSI CCRYGG 1 cut(s) 1155
BstEII GGTNACC 1 cut(s) 74
BstF5I GGATG 1 cut(s) 1079
BstFNI CGCG 1 cut(s) 24
BstKTI GATC 4 cut(s) 124, 578, 656, 1078
BstMAI GTCTC 2 cut(s) 378, 802
BstMBI GATC 4 cut(s) 121, 575, 653, 1075
BstMWI GCNNNNNNNGC 4 cut(s) 21, 361, 756, 1209
BstNI CCWGG 3 cut(s) 360, 944, 1187
BstNSI RCATGY 3 cut(s) 61, 705, 941
BstPI GGTNACC 1 cut(s) 74
BstSCI CCNGG 3 cut(s) 358, 942, 1185
BstSFI CTRYAG 2 cut(s) 709, 1121
BstSLI GKGCMC 2 cut(s) 761, 821
BstUI CGCG 1 cut(s) 24
BstV1I GCAGC 3 cut(s) 367, 1079, 1221
BstX2I RGATCY 1 cut(s) 575
BstXI CCANNNNNNTGG 1 cut(s) 586
BstYI RGATCY 1 cut(s) 575
BsuRI GGCC 4 cut(s) 235, 364, 479, 759
BtgI CCRYGG 1 cut(s) 1155
BtsCI GGATG 1 cut(s) 1079
BtsIMutI CAGTG 5 cut(s) 170, 718, 772, 903, 1007
BtuMI TCGCGA 1 cut(s) 24
BveI ACCTGC 1 cut(s) 670
Cac8I GCNNGC 5 cut(s) 26, 237, 550, 617, 1227
Cfr13I GGNCC 3 cut(s) 362, 757, 758
Csp6I GTAC 4 cut(s) 555, 591, 635, 695
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviAII CATG 8 cut(s) 58, 231, 279, 624, 702, 781, 938, 989
CviQI GTAC 4 cut(s) 555, 591, 635, 695
DdeI CTNAG 5 cut(s) 29, 315, 447, 675, 930
DpnI GATC 4 cut(s) 123, 577, 655, 1077
DpnII GATC 4 cut(s) 121, 575, 653, 1075
EaeI YGGCCR 1 cut(s) 477
Eam1104I CTCTTC 1 cut(s) 805
EarI CTCTTC 1 cut(s) 805
Ecl136II GAGCTC 1 cut(s) 736
Eco130I CCWWGG 2 cut(s) 761, 980
Eco24I GRGCYC 2 cut(s) 738, 761
Eco53kI GAGCTC 1 cut(s) 736
Eco57I CTGAAG 2 cut(s) 249, 1119
Eco88I CYCGRG 2 cut(s) 240, 543
Eco91I GGTNACC 1 cut(s) 74
EcoICRI GAGCTC 1 cut(s) 736
EcoO109I RGGNCCY 1 cut(s) 757
EcoO65I GGTNACC 1 cut(s) 74
EcoRII CCWGG 3 cut(s) 358, 942, 1185
EcoT14I CCWWGG 2 cut(s) 761, 980
EcoT38I GRGCYC 2 cut(s) 738, 761
ErhI CCWWGG 2 cut(s) 761, 980
FaeI CATG 8 cut(s) 61, 234, 282, 627, 705, 784, 941, 992
FaqI GGGAC 1 cut(s) 961
FatI CATG 8 cut(s) 57, 230, 278, 623, 701, 780, 937, 988
FauNDI CATATG 1 cut(s) 853
Fnu4HI GCNGC 4 cut(s) 356, 477, 1068, 1210
FokI GGATG 1 cut(s) 1066
FriOI GRGCYC 2 cut(s) 738, 761
Fsp4HI GCNGC 4 cut(s) 356, 477, 1068, 1210
FspBI CTAG 2 cut(s) 899, 981
GluI GCNGC 4 cut(s) 356, 477, 1068, 1210
HaeIII GGCC 4 cut(s) 235, 364, 479, 759
HapII CCGG 2 cut(s) 79, 182
Hin1II CATG 8 cut(s) 61, 234, 282, 627, 705, 784, 941, 992
HinfI GANTC 1 cut(s) 151
HpaII CCGG 2 cut(s) 79, 182
HphI GGTGA 5 cut(s) 86, 464, 592, 867, 1144
Hpy166II GTNNAC 1 cut(s) 600
Hpy188I TCNGA 4 cut(s) 145, 207, 448, 931
Hpy188III TCNNGA 7 cut(s) 23, 119, 182, 314, 543, 660, 809
Hpy8I GTNNAC 1 cut(s) 600
HpyAV CCTTC 5 cut(s) 321, 390, 453, 486, 657
HpyCH4V TGCA 7 cut(s) 427, 530, 632, 772, 950, 1067, 1196
HpyF10VI GCNNNNNNNGC 4 cut(s) 21, 361, 756, 1209
HpyF3I CTNAG 5 cut(s) 29, 315, 447, 675, 930
Hsp92II CATG 8 cut(s) 61, 234, 282, 627, 705, 784, 941, 992
Kpn2I TCCGGA 1 cut(s) 181
KpnI GGTACC 1 cut(s) 594
Kzo9I GATC 4 cut(s) 121, 575, 653, 1075
LmnI GCTCC 4 cut(s) 54, 121, 874, 895
Lsp1109I GCAGC 3 cut(s) 367, 1079, 1221
LweI GCATC 1 cut(s) 619
MaeI CTAG 2 cut(s) 899, 981
MaeIII GTNAC 7 cut(s) 74, 105, 704, 901, 908, 996, 1030
MalI GATC 4 cut(s) 123, 577, 655, 1077
MboI GATC 4 cut(s) 121, 575, 653, 1075
MboII GAAGA 4 cut(s) 227, 792, 1112, 1141
MfeI CAATTG 1 cut(s) 288
MflI RGATCY 1 cut(s) 575
MhlI GDGCHC 4 cut(s) 738, 761, 821, 864
MluCI AATT 9 cut(s) 48, 172, 185, 201, 288, 464, 569, 1015, 1051
MmeI TCCRAC 2 cut(s) 603, 697
MroI TCCGGA 1 cut(s) 181
MseI TTAA 2 cut(s) 1014, 1205
MspA1I CMGCKG 3 cut(s) 958, 1070, 1097
MspCI CTTAAG 1 cut(s) 1204
MspI CCGG 2 cut(s) 79, 182
MspR9I CCNGG 3 cut(s) 360, 944, 1187
MunI CAATTG 1 cut(s) 288
Mva1269I GAATGC 1 cut(s) 774
MvaI CCWGG 3 cut(s) 360, 944, 1187
MvnI CGCG 1 cut(s) 24
MwoI GCNNNNNNNGC 4 cut(s) 21, 361, 756, 1209
NdeI CATATG 1 cut(s) 853
NdeII GATC 4 cut(s) 121, 575, 653, 1075
NlaIII CATG 8 cut(s) 61, 234, 282, 627, 705, 784, 941, 992
NlaIV GGNNCC 9 cut(s) 129, 441, 592, 668, 721, 758, 759, 820, 1010
NmuCI GTSAC 3 cut(s) 74, 105, 901
NruI TCGCGA 1 cut(s) 24
NspI RCATGY 3 cut(s) 61, 705, 941
PaeR7I CTCGAG 2 cut(s) 240, 543
PciI ACATGT 1 cut(s) 937
PcsI WCGNNNNNNNCGW 1 cut(s) 658
PctI GAATGC 1 cut(s) 774
PfeI GAWTC 1 cut(s) 151
PflFI GACNNNGTC 1 cut(s) 103
PkrI GCNGC 4 cut(s) 357, 478, 1069, 1211
PscI ACATGT 1 cut(s) 937
Psp124BI GAGCTC 1 cut(s) 738
Psp6I CCWGG 3 cut(s) 358, 942, 1185
PspEI GGTNACC 1 cut(s) 74
PspGI CCWGG 3 cut(s) 358, 942, 1185
PspN4I GGNNCC 9 cut(s) 129, 441, 592, 668, 721, 758, 759, 820, 1010
PspOMI GGGCCC 1 cut(s) 757
PspPI GGNCC 3 cut(s) 362, 757, 758
PspXI VCTCGAGB 1 cut(s) 240
PsuI RGATCY 1 cut(s) 575
PsyI GACNNNGTC 1 cut(s) 103
PvuII CAGCTG 2 cut(s) 1070, 1097
RruI TCGCGA 1 cut(s) 24
RsaI GTAC 4 cut(s) 556, 592, 636, 696
RsaNI GTAC 4 cut(s) 555, 591, 635, 695
SacI GAGCTC 1 cut(s) 738
SaqAI TTAA 2 cut(s) 1014, 1205
SatI GCNGC 4 cut(s) 356, 477, 1068, 1210
Sau3AI GATC 4 cut(s) 121, 575, 653, 1075
Sau96I GGNCC 3 cut(s) 362, 757, 758
ScaI AGTACT 1 cut(s) 556
ScrFI CCNGG 3 cut(s) 360, 944, 1187
SduI GDGCHC 4 cut(s) 738, 761, 821, 864
SfaNI GCATC 1 cut(s) 619
SfcI CTRYAG 2 cut(s) 709, 1121
Sfr274I CTCGAG 2 cut(s) 240, 543
SlaI CTCGAG 2 cut(s) 240, 543
SmlI CTYRAG 3 cut(s) 240, 543, 1204
SmoI CTYRAG 3 cut(s) 240, 543, 1204
Sse9I AATT 9 cut(s) 48, 172, 185, 201, 288, 464, 569, 1015, 1051
SsiI CCGC 5 cut(s) 324, 476, 748, 822, 956
SspI AATATT 1 cut(s) 742
SspMI CTAG 2 cut(s) 899, 981
SstI GAGCTC 1 cut(s) 738
StyD4I CCNGG 3 cut(s) 358, 942, 1185
StyI CCWWGG 2 cut(s) 761, 980
TaqI TCGA 5 cut(s) 241, 544, 652, 661, 1215
TasI AATT 9 cut(s) 48, 172, 185, 201, 288, 464, 569, 1015, 1051
TatI WGTACW 1 cut(s) 554
TauI GCSGC 1 cut(s) 479
TfiI GAWTC 1 cut(s) 151
Tru1I TTAA 2 cut(s) 1014, 1205
Tru9I TTAA 2 cut(s) 1014, 1205
TscAI CASTG 5 cut(s) 170, 718, 779, 910, 1007
TseFI GTSAC 3 cut(s) 74, 105, 901
TseI GCWGC 3 cut(s) 355, 1067, 1209
Tsp45I GTSAC 3 cut(s) 74, 105, 901
TspDTI ATGAA 3 cut(s) 53, 379, 502
TspRI CASTG 5 cut(s) 170, 718, 779, 910, 1007
Tth111I GACNNNGTC 1 cut(s) 103
Vha464I CTTAAG 1 cut(s) 1204
XapI RAATTY 2 cut(s) 172, 1051
XceI RCATGY 3 cut(s) 61, 705, 941
XhoI CTCGAG 2 cut(s) 240, 543
XmaJI CCTAGG 1 cut(s) 980
XspI CTAG 2 cut(s) 899, 981
ZrmI AGTACT 1 cut(s) 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.