Tubby-like F-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18280 AT2G18280 |
| fragaria_vesca | FvH4_1g13070 |
| malus_domestica | MD02G1145300.v1.1 MD14G1114200.v1.1 MD15G1259500.v1.1 |
| prunus_persica | Prupe.7G156400_v2.0.a1 |
| pyrus_communis | pycom02g11500 pycom15g22700 |
| rosa_chinensis | RchiOBHm_Chr2g0101241 |
| rosa_laevigata | RLG00000017064 |
| rosa_multiflora | Rmu_sc0006314.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00141470 |
| rosa_rugosa | Rorug02G0099900 Rorug02G0100000 |
| rosa_samantha | Rh2AG145400 Rh2BG150800 Rh2CG151200 Rh2DG150900 |
| rosa_wichuraiana | Rw2G011340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 670 |
| Acc65I | GGTACC | 1 cut(s) | 590 |
| AccB1I | GGYRCC | 5 cut(s) | 127, 439, 590, 818, 1008 |
| AccII | CGCG | 1 cut(s) | 24 |
| AccIII | TCCGGA | 1 cut(s) | 181 |
| AciI | CCGC | 5 cut(s) | 324, 476, 748, 822, 956 |
| AclWI | GGATC | 2 cut(s) | 570, 1070 |
| AcoI | YGGCCR | 1 cut(s) | 477 |
| AcsI | RAATTY | 2 cut(s) | 172, 1051 |
| AcuI | CTGAAG | 2 cut(s) | 249, 1119 |
| AfaI | GTAC | 4 cut(s) | 556, 592, 636, 696 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 449, 754, 984 |
| AflII | CTTAAG | 1 cut(s) | 1204 |
| AflIII | ACRYGT | 1 cut(s) | 937 |
| AgsI | TTSAA | 5 cut(s) | 10, 155, 352, 885, 967 |
| AjnI | CCWGG | 3 cut(s) | 358, 942, 1185 |
| Alw21I | GWGCWC | 2 cut(s) | 738, 864 |
| Alw26I | GTCTC | 2 cut(s) | 378, 802 |
| AlwI | GGATC | 2 cut(s) | 570, 1070 |
| Ama87I | CYCGRG | 2 cut(s) | 240, 543 |
| Aor13HI | TCCGGA | 1 cut(s) | 181 |
| AoxI | GGCC | 4 cut(s) | 233, 362, 477, 757 |
| ApaI | GGGCCC | 1 cut(s) | 761 |
| ApeKI | GCWGC | 3 cut(s) | 355, 1067, 1209 |
| ApoI | RAATTY | 2 cut(s) | 172, 1051 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 634, 666 |
| Asp718I | GGTACC | 1 cut(s) | 590 |
| AspA2I | CCTAGG | 1 cut(s) | 980 |
| AspS9I | GGNCC | 3 cut(s) | 362, 757, 758 |
| AsuHPI | GGTGA | 5 cut(s) | 86, 464, 592, 867, 1144 |
| AvaI | CYCGRG | 2 cut(s) | 240, 543 |
| AvrII | CCTAGG | 1 cut(s) | 980 |
| BaeGI | GKGCMC | 2 cut(s) | 761, 821 |
| BanI | GGYRCC | 5 cut(s) | 127, 439, 590, 818, 1008 |
| BanII | GRGCYC | 2 cut(s) | 738, 761 |
| Bbv12I | GWGCWC | 2 cut(s) | 738, 864 |
| BbvCI | CCTCAGC | 1 cut(s) | 29 |
| BbvI | GCAGC | 3 cut(s) | 367, 1079, 1221 |
| BccI | CCATC | 3 cut(s) | 38, 148, 1087 |
| BciT130I | CCWGG | 3 cut(s) | 360, 944, 1187 |
| BcoDI | GTCTC | 2 cut(s) | 378, 802 |
| BfaI | CTAG | 2 cut(s) | 899, 981 |
| BfmI | CTRYAG | 2 cut(s) | 709, 1121 |
| BfrI | CTTAAG | 1 cut(s) | 1204 |
| BfuAI | ACCTGC | 1 cut(s) | 670 |
| BisI | GCNGC | 4 cut(s) | 356, 477, 1068, 1210 |
| BlnI | CCTAGG | 1 cut(s) | 980 |
| BlsI | GCNGC | 4 cut(s) | 357, 478, 1069, 1211 |
| BmcAI | AGTACT | 1 cut(s) | 556 |
| Bme1390I | CCNGG | 3 cut(s) | 360, 944, 1187 |
| BmeT110I | CYCGRG | 2 cut(s) | 240, 543 |
| BmgT120I | GGNCC | 3 cut(s) | 362, 757, 758 |
| BmiI | GGNNCC | 9 cut(s) | 129, 441, 592, 668, 721, 758, 759, 820, 1010 |
| BmrFI | CCNGG | 3 cut(s) | 360, 944, 1187 |
| BmsI | GCATC | 1 cut(s) | 619 |
| Bpu10I | CCTNAGC | 2 cut(s) | 29, 315 |
| BsaJI | CCNNGG | 5 cut(s) | 359, 761, 943, 980, 1155 |
| BsaWI | WCCGGW | 2 cut(s) | 78, 181 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 449, 754, 984 |
| Bse1I | ACTGG | 2 cut(s) | 370, 910 |
| Bse3DI | GCAATG | 1 cut(s) | 326 |
| BseAI | TCCGGA | 1 cut(s) | 181 |
| BseBI | CCWGG | 3 cut(s) | 360, 944, 1187 |
| BseDI | CCNNGG | 5 cut(s) | 359, 761, 943, 980, 1155 |
| BseGI | GGATG | 1 cut(s) | 1079 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 449, 754, 984 |
| BseMI | GCAATG | 1 cut(s) | 326 |
| BseMII | CTCAG | 4 cut(s) | 20, 306, 438, 921 |
| BseNI | ACTGG | 2 cut(s) | 370, 910 |
| BseSI | GKGCMC | 2 cut(s) | 761, 821 |
| BseXI | GCAGC | 3 cut(s) | 367, 1079, 1221 |
| BsgI | GTGCAG | 2 cut(s) | 410, 969 |
| Bsh1236I | CGCG | 1 cut(s) | 24 |
| BshFI | GGCC | 4 cut(s) | 235, 364, 479, 759 |
| BshNI | GGYRCC | 5 cut(s) | 127, 439, 590, 818, 1008 |
| BsiHKAI | GWGCWC | 2 cut(s) | 738, 864 |
| BsiHKCI | CYCGRG | 2 cut(s) | 240, 543 |
| BsiSI | CCGG | 2 cut(s) | 79, 182 |
| BslFI | GGGAC | 1 cut(s) | 961 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 449, 754, 984 |
| BsmAI | GTCTC | 2 cut(s) | 378, 802 |
| BsmFI | GGGAC | 1 cut(s) | 961 |
| BsmI | GAATGC | 1 cut(s) | 774 |
| BsnI | GGCC | 4 cut(s) | 235, 364, 479, 759 |
| BsoBI | CYCGRG | 2 cut(s) | 240, 543 |
| Bsp120I | GGGCCC | 1 cut(s) | 757 |
| Bsp1286I | GDGCHC | 4 cut(s) | 738, 761, 821, 864 |
| Bsp13I | TCCGGA | 1 cut(s) | 181 |
| Bsp143I | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| Bsp68I | TCGCGA | 1 cut(s) | 24 |
| BspACI | CCGC | 5 cut(s) | 324, 476, 748, 822, 956 |
| BspANI | GGCC | 4 cut(s) | 235, 364, 479, 759 |
| BspCNI | CTCAG | 4 cut(s) | 21, 307, 439, 922 |
| BspEI | TCCGGA | 1 cut(s) | 181 |
| BspFNI | CGCG | 1 cut(s) | 24 |
| BspLI | GGNNCC | 9 cut(s) | 129, 441, 592, 668, 721, 758, 759, 820, 1010 |
| BspMI | ACCTGC | 1 cut(s) | 670 |
| BspPI | GGATC | 2 cut(s) | 570, 1070 |
| BspT107I | GGYRCC | 5 cut(s) | 127, 439, 590, 818, 1008 |
| BspTI | CTTAAG | 1 cut(s) | 1204 |
| BsrDI | GCAATG | 1 cut(s) | 326 |
| BsrI | ACTGG | 2 cut(s) | 370, 910 |
| BssECI | CCNNGG | 5 cut(s) | 359, 761, 943, 980, 1155 |
| BssMI | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| BssT1I | CCWWGG | 2 cut(s) | 761, 980 |
| Bst2UI | CCWGG | 3 cut(s) | 360, 944, 1187 |
| Bst6I | CTCTTC | 1 cut(s) | 805 |
| BstAFI | CTTAAG | 1 cut(s) | 1204 |
| BstC8I | GCNNGC | 5 cut(s) | 26, 237, 550, 617, 1227 |
| BstDEI | CTNAG | 5 cut(s) | 29, 315, 447, 675, 930 |
| BstDSI | CCRYGG | 1 cut(s) | 1155 |
| BstEII | GGTNACC | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 1079 |
| BstFNI | CGCG | 1 cut(s) | 24 |
| BstKTI | GATC | 4 cut(s) | 124, 578, 656, 1078 |
| BstMAI | GTCTC | 2 cut(s) | 378, 802 |
| BstMBI | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 21, 361, 756, 1209 |
| BstNI | CCWGG | 3 cut(s) | 360, 944, 1187 |
| BstNSI | RCATGY | 3 cut(s) | 61, 705, 941 |
| BstPI | GGTNACC | 1 cut(s) | 74 |
| BstSCI | CCNGG | 3 cut(s) | 358, 942, 1185 |
| BstSFI | CTRYAG | 2 cut(s) | 709, 1121 |
| BstSLI | GKGCMC | 2 cut(s) | 761, 821 |
| BstUI | CGCG | 1 cut(s) | 24 |
| BstV1I | GCAGC | 3 cut(s) | 367, 1079, 1221 |
| BstX2I | RGATCY | 1 cut(s) | 575 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 586 |
| BstYI | RGATCY | 1 cut(s) | 575 |
| BsuRI | GGCC | 4 cut(s) | 235, 364, 479, 759 |
| BtgI | CCRYGG | 1 cut(s) | 1155 |
| BtsCI | GGATG | 1 cut(s) | 1079 |
| BtsIMutI | CAGTG | 5 cut(s) | 170, 718, 772, 903, 1007 |
| BtuMI | TCGCGA | 1 cut(s) | 24 |
| BveI | ACCTGC | 1 cut(s) | 670 |
| Cac8I | GCNNGC | 5 cut(s) | 26, 237, 550, 617, 1227 |
| Cfr13I | GGNCC | 3 cut(s) | 362, 757, 758 |
| Csp6I | GTAC | 4 cut(s) | 555, 591, 635, 695 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 51, 86 |
| CviAII | CATG | 8 cut(s) | 58, 231, 279, 624, 702, 781, 938, 989 |
| CviQI | GTAC | 4 cut(s) | 555, 591, 635, 695 |
| DdeI | CTNAG | 5 cut(s) | 29, 315, 447, 675, 930 |
| DpnI | GATC | 4 cut(s) | 123, 577, 655, 1077 |
| DpnII | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| EaeI | YGGCCR | 1 cut(s) | 477 |
| Eam1104I | CTCTTC | 1 cut(s) | 805 |
| EarI | CTCTTC | 1 cut(s) | 805 |
| Ecl136II | GAGCTC | 1 cut(s) | 736 |
| Eco130I | CCWWGG | 2 cut(s) | 761, 980 |
| Eco24I | GRGCYC | 2 cut(s) | 738, 761 |
| Eco53kI | GAGCTC | 1 cut(s) | 736 |
| Eco57I | CTGAAG | 2 cut(s) | 249, 1119 |
| Eco88I | CYCGRG | 2 cut(s) | 240, 543 |
| Eco91I | GGTNACC | 1 cut(s) | 74 |
| EcoICRI | GAGCTC | 1 cut(s) | 736 |
| EcoO109I | RGGNCCY | 1 cut(s) | 757 |
| EcoO65I | GGTNACC | 1 cut(s) | 74 |
| EcoRII | CCWGG | 3 cut(s) | 358, 942, 1185 |
| EcoT14I | CCWWGG | 2 cut(s) | 761, 980 |
| EcoT38I | GRGCYC | 2 cut(s) | 738, 761 |
| ErhI | CCWWGG | 2 cut(s) | 761, 980 |
| FaeI | CATG | 8 cut(s) | 61, 234, 282, 627, 705, 784, 941, 992 |
| FaqI | GGGAC | 1 cut(s) | 961 |
| FatI | CATG | 8 cut(s) | 57, 230, 278, 623, 701, 780, 937, 988 |
| FauNDI | CATATG | 1 cut(s) | 853 |
| Fnu4HI | GCNGC | 4 cut(s) | 356, 477, 1068, 1210 |
| FokI | GGATG | 1 cut(s) | 1066 |
| FriOI | GRGCYC | 2 cut(s) | 738, 761 |
| Fsp4HI | GCNGC | 4 cut(s) | 356, 477, 1068, 1210 |
| FspBI | CTAG | 2 cut(s) | 899, 981 |
| GluI | GCNGC | 4 cut(s) | 356, 477, 1068, 1210 |
| HaeIII | GGCC | 4 cut(s) | 235, 364, 479, 759 |
| HapII | CCGG | 2 cut(s) | 79, 182 |
| Hin1II | CATG | 8 cut(s) | 61, 234, 282, 627, 705, 784, 941, 992 |
| HinfI | GANTC | 1 cut(s) | 151 |
| HpaII | CCGG | 2 cut(s) | 79, 182 |
| HphI | GGTGA | 5 cut(s) | 86, 464, 592, 867, 1144 |
| Hpy166II | GTNNAC | 1 cut(s) | 600 |
| Hpy188I | TCNGA | 4 cut(s) | 145, 207, 448, 931 |
| Hpy188III | TCNNGA | 7 cut(s) | 23, 119, 182, 314, 543, 660, 809 |
| Hpy8I | GTNNAC | 1 cut(s) | 600 |
| HpyAV | CCTTC | 5 cut(s) | 321, 390, 453, 486, 657 |
| HpyCH4V | TGCA | 7 cut(s) | 427, 530, 632, 772, 950, 1067, 1196 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 21, 361, 756, 1209 |
| HpyF3I | CTNAG | 5 cut(s) | 29, 315, 447, 675, 930 |
| Hsp92II | CATG | 8 cut(s) | 61, 234, 282, 627, 705, 784, 941, 992 |
| Kpn2I | TCCGGA | 1 cut(s) | 181 |
| KpnI | GGTACC | 1 cut(s) | 594 |
| Kzo9I | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| LmnI | GCTCC | 4 cut(s) | 54, 121, 874, 895 |
| Lsp1109I | GCAGC | 3 cut(s) | 367, 1079, 1221 |
| LweI | GCATC | 1 cut(s) | 619 |
| MaeI | CTAG | 2 cut(s) | 899, 981 |
| MaeIII | GTNAC | 7 cut(s) | 74, 105, 704, 901, 908, 996, 1030 |
| MalI | GATC | 4 cut(s) | 123, 577, 655, 1077 |
| MboI | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| MboII | GAAGA | 4 cut(s) | 227, 792, 1112, 1141 |
| MfeI | CAATTG | 1 cut(s) | 288 |
| MflI | RGATCY | 1 cut(s) | 575 |
| MhlI | GDGCHC | 4 cut(s) | 738, 761, 821, 864 |
| MluCI | AATT | 9 cut(s) | 48, 172, 185, 201, 288, 464, 569, 1015, 1051 |
| MmeI | TCCRAC | 2 cut(s) | 603, 697 |
| MroI | TCCGGA | 1 cut(s) | 181 |
| MseI | TTAA | 2 cut(s) | 1014, 1205 |
| MspA1I | CMGCKG | 3 cut(s) | 958, 1070, 1097 |
| MspCI | CTTAAG | 1 cut(s) | 1204 |
| MspI | CCGG | 2 cut(s) | 79, 182 |
| MspR9I | CCNGG | 3 cut(s) | 360, 944, 1187 |
| MunI | CAATTG | 1 cut(s) | 288 |
| Mva1269I | GAATGC | 1 cut(s) | 774 |
| MvaI | CCWGG | 3 cut(s) | 360, 944, 1187 |
| MvnI | CGCG | 1 cut(s) | 24 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 21, 361, 756, 1209 |
| NdeI | CATATG | 1 cut(s) | 853 |
| NdeII | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| NlaIII | CATG | 8 cut(s) | 61, 234, 282, 627, 705, 784, 941, 992 |
| NlaIV | GGNNCC | 9 cut(s) | 129, 441, 592, 668, 721, 758, 759, 820, 1010 |
| NmuCI | GTSAC | 3 cut(s) | 74, 105, 901 |
| NruI | TCGCGA | 1 cut(s) | 24 |
| NspI | RCATGY | 3 cut(s) | 61, 705, 941 |
| PaeR7I | CTCGAG | 2 cut(s) | 240, 543 |
| PciI | ACATGT | 1 cut(s) | 937 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 658 |
| PctI | GAATGC | 1 cut(s) | 774 |
| PfeI | GAWTC | 1 cut(s) | 151 |
| PflFI | GACNNNGTC | 1 cut(s) | 103 |
| PkrI | GCNGC | 4 cut(s) | 357, 478, 1069, 1211 |
| PscI | ACATGT | 1 cut(s) | 937 |
| Psp124BI | GAGCTC | 1 cut(s) | 738 |
| Psp6I | CCWGG | 3 cut(s) | 358, 942, 1185 |
| PspEI | GGTNACC | 1 cut(s) | 74 |
| PspGI | CCWGG | 3 cut(s) | 358, 942, 1185 |
| PspN4I | GGNNCC | 9 cut(s) | 129, 441, 592, 668, 721, 758, 759, 820, 1010 |
| PspOMI | GGGCCC | 1 cut(s) | 757 |
| PspPI | GGNCC | 3 cut(s) | 362, 757, 758 |
| PspXI | VCTCGAGB | 1 cut(s) | 240 |
| PsuI | RGATCY | 1 cut(s) | 575 |
| PsyI | GACNNNGTC | 1 cut(s) | 103 |
| PvuII | CAGCTG | 2 cut(s) | 1070, 1097 |
| RruI | TCGCGA | 1 cut(s) | 24 |
| RsaI | GTAC | 4 cut(s) | 556, 592, 636, 696 |
| RsaNI | GTAC | 4 cut(s) | 555, 591, 635, 695 |
| SacI | GAGCTC | 1 cut(s) | 738 |
| SaqAI | TTAA | 2 cut(s) | 1014, 1205 |
| SatI | GCNGC | 4 cut(s) | 356, 477, 1068, 1210 |
| Sau3AI | GATC | 4 cut(s) | 121, 575, 653, 1075 |
| Sau96I | GGNCC | 3 cut(s) | 362, 757, 758 |
| ScaI | AGTACT | 1 cut(s) | 556 |
| ScrFI | CCNGG | 3 cut(s) | 360, 944, 1187 |
| SduI | GDGCHC | 4 cut(s) | 738, 761, 821, 864 |
| SfaNI | GCATC | 1 cut(s) | 619 |
| SfcI | CTRYAG | 2 cut(s) | 709, 1121 |
| Sfr274I | CTCGAG | 2 cut(s) | 240, 543 |
| SlaI | CTCGAG | 2 cut(s) | 240, 543 |
| SmlI | CTYRAG | 3 cut(s) | 240, 543, 1204 |
| SmoI | CTYRAG | 3 cut(s) | 240, 543, 1204 |
| Sse9I | AATT | 9 cut(s) | 48, 172, 185, 201, 288, 464, 569, 1015, 1051 |
| SsiI | CCGC | 5 cut(s) | 324, 476, 748, 822, 956 |
| SspI | AATATT | 1 cut(s) | 742 |
| SspMI | CTAG | 2 cut(s) | 899, 981 |
| SstI | GAGCTC | 1 cut(s) | 738 |
| StyD4I | CCNGG | 3 cut(s) | 358, 942, 1185 |
| StyI | CCWWGG | 2 cut(s) | 761, 980 |
| TaqI | TCGA | 5 cut(s) | 241, 544, 652, 661, 1215 |
| TasI | AATT | 9 cut(s) | 48, 172, 185, 201, 288, 464, 569, 1015, 1051 |
| TatI | WGTACW | 1 cut(s) | 554 |
| TauI | GCSGC | 1 cut(s) | 479 |
| TfiI | GAWTC | 1 cut(s) | 151 |
| Tru1I | TTAA | 2 cut(s) | 1014, 1205 |
| Tru9I | TTAA | 2 cut(s) | 1014, 1205 |
| TscAI | CASTG | 5 cut(s) | 170, 718, 779, 910, 1007 |
| TseFI | GTSAC | 3 cut(s) | 74, 105, 901 |
| TseI | GCWGC | 3 cut(s) | 355, 1067, 1209 |
| Tsp45I | GTSAC | 3 cut(s) | 74, 105, 901 |
| TspDTI | ATGAA | 3 cut(s) | 53, 379, 502 |
| TspRI | CASTG | 5 cut(s) | 170, 718, 779, 910, 1007 |
| Tth111I | GACNNNGTC | 1 cut(s) | 103 |
| Vha464I | CTTAAG | 1 cut(s) | 1204 |
| XapI | RAATTY | 2 cut(s) | 172, 1051 |
| XceI | RCATGY | 3 cut(s) | 61, 705, 941 |
| XhoI | CTCGAG | 2 cut(s) | 240, 543 |
| XmaJI | CCTAGG | 1 cut(s) | 980 |
| XspI | CTAG | 2 cut(s) | 899, 981 |
| ZrmI | AGTACT | 1 cut(s) | 556 |