Prupe.7G165300_v2.0.a1

Protein CHAPERONE-LIKE PROTEIN OF POR1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0010931
Physical Location & Seq
Forward (+)
16965089 .. 16967803
2715 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G165300.1

Sequence Viewer

Length: 888 bp
ATGACTGCTGTATCTGGACTGACTGGTAGTCCCTCCAGATGCTGTTTCCAAATTCCAGTACGCAGTTCCGGTTCACTATGTGGGCGAGTTTCAAATTTCCCTCATAGTTGGAAGCCTGCAGGAAAGAATGAGCTACTTCGTGGGGAAAGAAGTTATTGGACTGGTTTTACACAAAGATTGAATGCACGAAAAACACATCTGCTGAAGTTTGCCATGGATGCATCCTATGGTGATATTCCAAATGAACCAACTGGTAAGGCATCCTATGGTGATATTCCAAATGAACCAACTGCTATCTTTCCTAGGATTAATGTGAGGGACCCATACAAACGACTTGGAATAAGCAGGGAGGCTTCTGAAGATGAGATCCAAGGTGCAAGGAACTTCCTTATCCGACAGTATGCAGGTCACAAACCAAGTGTGGATGCAATTGAATCAGCACATGACAAAATAATCATGCAGCAGTTTTATGACAGAAAGAACCCAAAAATTGACTTTAAAAAAAAGGTCAGGGAAGTCAATCAGTCTCGTATTGTGCAGGAGGTGAGAAATAGGTTTCGAACTCCATCCACAAAGTTCATTATAAAAACGTCCATTGCATTTGTCGTGCTTGGAGCTCTCACTGTTCTATTTCCAACCGAAGAGGGTCCAACCCTTCAGGTAGCCATTTCCTTGTTGGCTACCATCTACTTTGTATATGACAGGCTGAAGAGCAAATTACGAGCTGTGCTCTACAGTGCTGGAGCATTTGTTTTCTCATGGCTCGTGGGAACCTTCTTGATGGTGTCTGTGATTCCACCCATACTTAAAGGACCAAGAAGTTTTGAGGTGACAACTTCGTTGATAACCTACGTCCTACTCTGGGTCTCGTCTACTTATCTGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CPP1-like

Protein Analysis

296

Amino Acids

33.22

Weight (kDa)

9.95

Isoelectric Point (pI)

30.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 584
Acc36I ACCTGC 1 cut(s) 395
AccI GTMKAC 1 cut(s) 872
AclWI GGATC 1 cut(s) 361
AcsI RAATTY 2 cut(s) 51, 94
AcuI CTGAAG 4 cut(s) 224, 378, 641, 728
AdeI CACNNNGTG 1 cut(s) 80
AfaI GTAC 1 cut(s) 60
AfiI CCNNNNNNNGG 1 cut(s) 862
AgsI TTSAA 3 cut(s) 93, 181, 434
AhdI GACNNNNNGTC 1 cut(s) 27
AluBI AGCT 3 cut(s) 133, 617, 725
AluI AGCT 3 cut(s) 133, 617, 725
Alw21I GWGCWC 2 cut(s) 619, 732
Alw26I GTCTC 2 cut(s) 531, 871
AlwI GGATC 1 cut(s) 361
AlwNI CAGNNNCTG 1 cut(s) 42
ApeKI GCWGC 1 cut(s) 460
ApoI RAATTY 2 cut(s) 51, 94
AseI ATTAAT 1 cut(s) 309
AspA2I CCTAGG 1 cut(s) 302
AspS9I GGNCC 3 cut(s) 319, 647, 812
AsuHPI GGTGA 4 cut(s) 242, 281, 556, 841
AsuII TTCGAA 1 cut(s) 559
AvaII GGWCC 3 cut(s) 319, 647, 812
AvrII CCTAGG 1 cut(s) 302
BaeI ACNNNNGTAYC 1 cut(s) 27
BanII GRGCYC 1 cut(s) 619
BauI CACGAG 1 cut(s) 764
Bbv12I GWGCWC 2 cut(s) 619, 732
BbvI GCAGC 1 cut(s) 472
BccI CCATC 3 cut(s) 574, 692, 775
BcoDI GTCTC 2 cut(s) 531, 871
BfaI CTAG 1 cut(s) 303
BfmI CTRYAG 2 cut(s) 117, 733
BfuAI ACCTGC 1 cut(s) 395
BisI GCNGC 1 cut(s) 461
BlnI CCTAGG 1 cut(s) 302
BlsI GCNGC 1 cut(s) 462
Bme18I GGWCC 3 cut(s) 319, 647, 812
BmeRI GACNNNNNGTC 1 cut(s) 27
BmgT120I GGNCC 3 cut(s) 319, 647, 812
BmiI GGNNCC 4 cut(s) 320, 321, 648, 772
BmsI GCATC 5 cut(s) 29, 208, 230, 269, 415
BplI GAGNNNNNCTC 2 cut(s) 714, 746
BpmI CTGGAG 2 cut(s) 19, 762
Bpu14I TTCGAA 1 cut(s) 559
BsaI GGTCTC 1 cut(s) 871
BsaJI CCNNGG 3 cut(s) 213, 302, 370
BsaWI WCCGGW 1 cut(s) 68
BsaXI ACNNNNNCTCC 2 cut(s) 735, 765
Bsc4I CCNNNNNNNGG 1 cut(s) 862
Bse1I ACTGG 4 cut(s) 28, 56, 166, 256
Bse3DI GCAATG 1 cut(s) 594
BseDI CCNNGG 3 cut(s) 213, 302, 370
BseGI GGATG 5 cut(s) 221, 223, 260, 430, 566
BseLI CCNNNNNNNGG 1 cut(s) 862
BseMI GCAATG 1 cut(s) 594
BseNI ACTGG 4 cut(s) 28, 56, 166, 256
BseXI GCAGC 1 cut(s) 472
BsgI GTGCAG 1 cut(s) 557
BsiHKAI GWGCWC 2 cut(s) 619, 732
BsiSI CCGG 1 cut(s) 69
BslFI GGGAC 2 cut(s) 15, 332
BslI CCNNNNNNNGG 1 cut(s) 862
BsmAI GTCTC 2 cut(s) 531, 871
BsmFI GGGAC 2 cut(s) 15, 332
BsmI GAATGC 1 cut(s) 187
Bso31I GGTCTC 1 cut(s) 871
Bsp119I TTCGAA 1 cut(s) 559
Bsp1286I GDGCHC 2 cut(s) 619, 732
Bsp143I GATC 1 cut(s) 366
Bsp19I CCATGG 1 cut(s) 213
BspLI GGNNCC 4 cut(s) 320, 321, 648, 772
BspMAI CTGCAG 1 cut(s) 121
BspMI ACCTGC 1 cut(s) 395
BspPI GGATC 1 cut(s) 361
BspQI GCTCTTC 1 cut(s) 704
BspT104I TTCGAA 1 cut(s) 559
BspTNI GGTCTC 1 cut(s) 871
BsrDI GCAATG 1 cut(s) 594
BsrI ACTGG 4 cut(s) 28, 56, 166, 256
BssECI CCNNGG 3 cut(s) 213, 302, 370
BssMI GATC 1 cut(s) 366
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 3 cut(s) 213, 302, 370
Bst2BI CACGAG 1 cut(s) 764
Bst4CI ACNGT 3 cut(s) 399, 625, 737
Bst6I CTCTTC 2 cut(s) 636, 704
BstBI TTCGAA 1 cut(s) 559
BstC8I GCNNGC 1 cut(s) 117
BstDSI CCRYGG 1 cut(s) 213
BstF5I GGATG 5 cut(s) 221, 223, 260, 430, 566
BstKTI GATC 1 cut(s) 369
BstMAI GTCTC 2 cut(s) 531, 871
BstMBI GATC 1 cut(s) 366
BstMWI GCNNNNNNNGC 1 cut(s) 218
BstSFI CTRYAG 2 cut(s) 117, 733
BstV1I GCAGC 1 cut(s) 472
BstX2I RGATCY 1 cut(s) 366
BstYI RGATCY 1 cut(s) 366
BtgI CCRYGG 1 cut(s) 213
BtsCI GGATG 5 cut(s) 221, 223, 260, 430, 566
BtsIMutI CAGTG 2 cut(s) 621, 742
BveI ACCTGC 1 cut(s) 395
Cac8I GCNNGC 1 cut(s) 117
CaiI CAGNNNCTG 1 cut(s) 42
Cfr13I GGNCC 3 cut(s) 319, 647, 812
Csp6I GTAC 1 cut(s) 59
CviAII CATG 4 cut(s) 214, 443, 457, 759
CviJI RGCY 9 cut(s) 115, 133, 353, 617, 665, 680, 706, 725, 763
CviKI_1 RGCY 9 cut(s) 115, 133, 353, 617, 665, 680, 706, 725, 763
CviQI GTAC 1 cut(s) 59
DpnI GATC 1 cut(s) 368
DpnII GATC 1 cut(s) 366
DraI TTTAAA 1 cut(s) 499
DraIII CACNNNGTG 1 cut(s) 80
DriI GACNNNNNGTC 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 636, 704
Eam1105I GACNNNNNGTC 1 cut(s) 27
EarI CTCTTC 2 cut(s) 636, 704
Ecl136II GAGCTC 1 cut(s) 617
Eco130I CCWWGG 3 cut(s) 213, 302, 370
Eco24I GRGCYC 1 cut(s) 619
Eco31I GGTCTC 1 cut(s) 871
Eco47I GGWCC 3 cut(s) 319, 647, 812
Eco53kI GAGCTC 1 cut(s) 617
Eco57I CTGAAG 4 cut(s) 224, 378, 641, 728
EcoICRI GAGCTC 1 cut(s) 617
EcoO109I RGGNCCY 1 cut(s) 319
EcoT14I CCWWGG 3 cut(s) 213, 302, 370
EcoT22I ATGCAT 1 cut(s) 223
EcoT38I GRGCYC 1 cut(s) 619
ErhI CCWWGG 3 cut(s) 213, 302, 370
FaeI CATG 4 cut(s) 217, 446, 460, 762
FaqI GGGAC 2 cut(s) 15, 332
FatI CATG 4 cut(s) 213, 442, 456, 758
FblI GTMKAC 1 cut(s) 872
Fnu4HI GCNGC 1 cut(s) 461
FokI GGATG 5 cut(s) 208, 230, 247, 437, 553
FriOI GRGCYC 1 cut(s) 619
Fsp4HI GCNGC 1 cut(s) 461
FspBI CTAG 1 cut(s) 303
GluI GCNGC 1 cut(s) 461
GsuI CTGGAG 2 cut(s) 19, 762
HapII CCGG 1 cut(s) 69
Hin1II CATG 4 cut(s) 217, 446, 460, 762
HinfI GANTC 2 cut(s) 434, 793
HpaII CCGG 1 cut(s) 69
HphI GGTGA 4 cut(s) 242, 281, 556, 841
Hpy166II GTNNAC 2 cut(s) 74, 873
Hpy188I TCNGA 3 cut(s) 358, 395, 882
Hpy188III TCNNGA 3 cut(s) 15, 36, 778
Hpy8I GTNNAC 2 cut(s) 74, 873
HpyAV CCTTC 2 cut(s) 665, 784
HpyCH4III ACNGT 3 cut(s) 399, 625, 737
HpyCH4IV ACGT 2 cut(s) 590, 852
HpyCH4V TGCA 9 cut(s) 119, 185, 221, 377, 404, 428, 460, 538, 599
HpyF10VI GCNNNNNNNGC 1 cut(s) 218
HpySE526I ACGT 2 cut(s) 590, 852
Hsp92II CATG 4 cut(s) 217, 446, 460, 762
KflI GGGWCCC 1 cut(s) 319
Kzo9I GATC 1 cut(s) 366
LguI GCTCTTC 1 cut(s) 704
LmnI GCTCC 2 cut(s) 614, 743
Lsp1109I GCAGC 1 cut(s) 472
LweI GCATC 5 cut(s) 29, 208, 230, 269, 415
MaeI CTAG 1 cut(s) 303
MaeII ACGT 2 cut(s) 590, 852
MaeIII GTNAC 2 cut(s) 407, 829
MalI GATC 1 cut(s) 368
MboI GATC 1 cut(s) 366
MboII GAAGA 3 cut(s) 371, 653, 721
MfeI CAATTG 1 cut(s) 429
MflI RGATCY 1 cut(s) 366
MhlI GDGCHC 2 cut(s) 619, 732
MluCI AATT 5 cut(s) 51, 94, 429, 489, 716
MmeI TCCRAC 4 cut(s) 89, 418, 659, 674
MnlI CCTC 7 cut(s) 43, 111, 309, 343, 535, 637, 820
Mph1103I ATGCAT 1 cut(s) 223
MseI TTAA 3 cut(s) 309, 498, 807
MspI CCGG 1 cut(s) 69
MunI CAATTG 1 cut(s) 429
Mva1269I GAATGC 1 cut(s) 187
MwoI GCNNNNNNNGC 1 cut(s) 218
NcoI CCATGG 1 cut(s) 213
NdeII GATC 1 cut(s) 366
NlaIII CATG 4 cut(s) 217, 446, 460, 762
NlaIV GGNNCC 4 cut(s) 320, 321, 648, 772
NmuCI GTSAC 2 cut(s) 407, 829
NsiI ATGCAT 1 cut(s) 223
NspV TTCGAA 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 704
PctI GAATGC 1 cut(s) 187
PfeI GAWTC 2 cut(s) 434, 793
PkrI GCNGC 1 cut(s) 462
PpuMI RGGWCCY 1 cut(s) 319
PshBI ATTAAT 1 cut(s) 309
PsiI TTATAA 1 cut(s) 584
Psp124BI GAGCTC 1 cut(s) 619
Psp5II RGGWCCY 1 cut(s) 319
PspN4I GGNNCC 4 cut(s) 320, 321, 648, 772
PspPI GGNCC 3 cut(s) 319, 647, 812
PspPPI RGGWCCY 1 cut(s) 319
PstI CTGCAG 1 cut(s) 121
PstNI CAGNNNCTG 1 cut(s) 42
PsuI RGATCY 1 cut(s) 366
RsaI GTAC 1 cut(s) 60
RsaNI GTAC 1 cut(s) 59
SacI GAGCTC 1 cut(s) 619
SapI GCTCTTC 1 cut(s) 704
SaqAI TTAA 3 cut(s) 309, 498, 807
SatI GCNGC 1 cut(s) 461
Sau3AI GATC 1 cut(s) 366
Sau96I GGNCC 3 cut(s) 319, 647, 812
SbfI CCTGCAGG 1 cut(s) 121
SdaI CCTGCAGG 1 cut(s) 121
SduI GDGCHC 2 cut(s) 619, 732
SfaNI GCATC 5 cut(s) 29, 208, 230, 269, 415
SfcI CTRYAG 2 cut(s) 117, 733
SfuI TTCGAA 1 cut(s) 559
SinI GGWCC 3 cut(s) 319, 647, 812
Sse8387I CCTGCAGG 1 cut(s) 121
Sse9I AATT 5 cut(s) 51, 94, 429, 489, 716
SspMI CTAG 1 cut(s) 303
SstI GAGCTC 1 cut(s) 619
StyI CCWWGG 3 cut(s) 213, 302, 370
TaaI ACNGT 3 cut(s) 399, 625, 737
TaiI ACGT 2 cut(s) 593, 855
TaqI TCGA 1 cut(s) 559
TasI AATT 5 cut(s) 51, 94, 429, 489, 716
TfiI GAWTC 2 cut(s) 434, 793
Tru1I TTAA 3 cut(s) 309, 498, 807
Tru9I TTAA 3 cut(s) 309, 498, 807
TscAI CASTG 2 cut(s) 628, 742
TseFI GTSAC 2 cut(s) 407, 829
TseI GCWGC 1 cut(s) 460
Tsp45I GTSAC 2 cut(s) 407, 829
TspDTI ATGAA 3 cut(s) 258, 297, 568
TspRI CASTG 2 cut(s) 628, 742
VpaK11BI GGWCC 3 cut(s) 319, 647, 812
VspI ATTAAT 1 cut(s) 309
XapI RAATTY 2 cut(s) 51, 94
XcmI CCANNNNNNNNNTGG 1 cut(s) 673
XmaJI CCTAGG 1 cut(s) 302
XmiI GTMKAC 1 cut(s) 872
XspI CTAG 1 cut(s) 303
Zsp2I ATGCAT 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.