pycom15g21900

Protein CHAPERONE-LIKE PROTEIN OF POR1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0010931
Physical Location & Seq
Reverse (-)
15926641 .. 15927928
1288 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g21900.1

Sequence Viewer

Length: 636 bp
ATGGATGCATCCTACGGCGATATGTCCAATGAACCAACTGCTATCTTTCCTAGGATTAATGTGAGGGACCCATACAAACGACTTGGAATAAGCAGGGATGCTTCGGAAGATGAGATTCAGGGTGCAAGGAACTTCCTTATCCGACAGTATGCAGGTCACAAACCAAGTGTGGATGCAATTGAATCAGCCCATGATAAAATAATCATGCAGCAGTTCTACGACAGGAAGAATCCAAAAATTGACTTTAAGAAAAAGTACAGGGAAGTCAATCAGTCCCGTGTTGTGCAGGCTGTGAGAAATAGGTTCCGAACTCCGTCCACAAAATTCATTATAAAAACGTCAATTGCATTTGTAGTGCTTGCAGCTCTCACTGTTCTATTTCCAACTGAAGAAGGTCCGACTCTTCAAGTAGCCCTTTCCTTGTTGGCTACCATTTACTTTGTATATGACAGGCTTAAGAGCAAGTTACGAGCTTTTCTCTACAGTGCTGGATCATTTGCTTTGTCGTGGCTCTTGGGAACCTTCTTGATGGTGTCTGTGGTTCCACCTCTACTGAAAGGACCAAGGAGTTTCGAGGTGACAACGTCATTGATAACCTATGTGCTACTCTGGGTCTCGTCGACATACCTGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CPP1-like

Protein Analysis

212

Amino Acids

24.03

Weight (kDa)

9.85

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CPP1-like PF11833 32 - 210 1.5e-53 Protein CHAPERONE-LIKE PROTEIN OF POR1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 332
Acc36I ACCTGC 1 cut(s) 143
AccI GTMKAC 1 cut(s) 620
AclWI GGATC 1 cut(s) 499
AcsI RAATTY 1 cut(s) 323
AcuI CTGAAG 1 cut(s) 408
AfaI GTAC 1 cut(s) 257
AflII CTTAAG 1 cut(s) 455
AgsI TTSAA 2 cut(s) 182, 407
AluBI AGCT 2 cut(s) 365, 473
AluI AGCT 2 cut(s) 365, 473
Alw26I GTCTC 1 cut(s) 619
AlwI GGATC 1 cut(s) 499
ApeKI GCWGC 2 cut(s) 208, 362
ApoI RAATTY 1 cut(s) 323
AseI ATTAAT 1 cut(s) 57
AspA2I CCTAGG 1 cut(s) 50
AspS9I GGNCC 3 cut(s) 67, 395, 560
AsuHPI GGTGA 1 cut(s) 589
AvaII GGWCC 3 cut(s) 67, 395, 560
AvrII CCTAGG 1 cut(s) 50
BbvI GCAGC 2 cut(s) 220, 374
BccI CCATC 1 cut(s) 523
BceAI ACGGC 1 cut(s) 31
BcoDI GTCTC 1 cut(s) 619
BfaI CTAG 1 cut(s) 51
BfmI CTRYAG 1 cut(s) 481
BfrI CTTAAG 1 cut(s) 455
BfuAI ACCTGC 1 cut(s) 143
BisI GCNGC 2 cut(s) 209, 363
BlnI CCTAGG 1 cut(s) 50
BlsI GCNGC 2 cut(s) 210, 364
Bme18I GGWCC 3 cut(s) 67, 395, 560
BmgT120I GGNCC 3 cut(s) 67, 395, 560
BmiI GGNNCC 5 cut(s) 68, 69, 305, 520, 543
BmsI GCATC 3 cut(s) 17, 88, 163
BplI GAGNNNNNCTC 2 cut(s) 462, 494
BsaI GGTCTC 1 cut(s) 619
BsaJI CCNNGG 2 cut(s) 50, 563
BseDI CCNNGG 2 cut(s) 50, 563
BseGI GGATG 4 cut(s) 8, 10, 103, 178
BseXI GCAGC 2 cut(s) 220, 374
BsgI GTGCAG 1 cut(s) 305
BslFI GGGAC 2 cut(s) 80, 259
BsmAI GTCTC 1 cut(s) 619
BsmFI GGGAC 2 cut(s) 80, 259
Bso31I GGTCTC 1 cut(s) 619
Bsp143I GATC 1 cut(s) 491
BspLI GGNNCC 5 cut(s) 68, 69, 305, 520, 543
BspMI ACCTGC 1 cut(s) 143
BspPI GGATC 1 cut(s) 499
BspTI CTTAAG 1 cut(s) 455
BspTNI GGTCTC 1 cut(s) 619
BssECI CCNNGG 2 cut(s) 50, 563
BssMI GATC 1 cut(s) 491
BssT1I CCWWGG 2 cut(s) 50, 563
Bst4CI ACNGT 3 cut(s) 147, 373, 485
Bst6I CTCTTC 1 cut(s) 408
BstAFI CTTAAG 1 cut(s) 455
BstC8I GCNNGC 2 cut(s) 288, 360
BstF5I GGATG 4 cut(s) 8, 10, 103, 178
BstKTI GATC 1 cut(s) 494
BstMAI GTCTC 1 cut(s) 619
BstMBI GATC 1 cut(s) 491
BstSFI CTRYAG 1 cut(s) 481
BstV1I GCAGC 2 cut(s) 220, 374
BtsCI GGATG 4 cut(s) 8, 10, 103, 178
BtsIMutI CAGTG 2 cut(s) 369, 490
BveI ACCTGC 1 cut(s) 143
Cac8I GCNNGC 2 cut(s) 288, 360
Cfr13I GGNCC 3 cut(s) 67, 395, 560
Csp6I GTAC 1 cut(s) 256
CviAII CATG 2 cut(s) 191, 205
CviJI RGCY 8 cut(s) 188, 290, 365, 413, 428, 454, 473, 511
CviKI_1 RGCY 8 cut(s) 188, 290, 365, 413, 428, 454, 473, 511
CviQI GTAC 1 cut(s) 256
DpnI GATC 1 cut(s) 493
DpnII GATC 1 cut(s) 491
Eam1104I CTCTTC 1 cut(s) 408
EarI CTCTTC 1 cut(s) 408
Eco130I CCWWGG 2 cut(s) 50, 563
Eco31I GGTCTC 1 cut(s) 619
Eco47I GGWCC 3 cut(s) 67, 395, 560
Eco57I CTGAAG 1 cut(s) 408
EcoO109I RGGNCCY 1 cut(s) 67
EcoT14I CCWWGG 2 cut(s) 50, 563
EcoT22I ATGCAT 1 cut(s) 10
ErhI CCWWGG 2 cut(s) 50, 563
FaeI CATG 2 cut(s) 194, 208
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 2 cut(s) 80, 259
FatI CATG 2 cut(s) 190, 204
FblI GTMKAC 1 cut(s) 620
Fnu4HI GCNGC 2 cut(s) 209, 363
FokI GGATG 3 cut(s) 17, 110, 185
Fsp4HI GCNGC 2 cut(s) 209, 363
FspBI CTAG 1 cut(s) 51
GluI GCNGC 2 cut(s) 209, 363
Hin1II CATG 2 cut(s) 194, 208
HincII GTYRAC 1 cut(s) 621
HindII GTYRAC 1 cut(s) 621
HinfI GANTC 4 cut(s) 115, 182, 229, 400
HphI GGTGA 1 cut(s) 589
Hpy166II GTNNAC 2 cut(s) 318, 621
Hpy188I TCNGA 4 cut(s) 106, 143, 308, 399
Hpy188III TCNNGA 1 cut(s) 526
Hpy8I GTNNAC 2 cut(s) 318, 621
Hpy99I CGWCG 1 cut(s) 622
HpyAV CCTTC 2 cut(s) 386, 532
HpyCH4III ACNGT 3 cut(s) 147, 373, 485
HpyCH4IV ACGT 2 cut(s) 338, 584
HpyCH4V TGCA 8 cut(s) 8, 125, 152, 176, 208, 286, 347, 362
HpySE526I ACGT 2 cut(s) 338, 584
Hsp92II CATG 2 cut(s) 194, 208
KflI GGGWCCC 1 cut(s) 67
Kzo9I GATC 1 cut(s) 491
LpnPI CCDG 9 cut(s) 79, 104, 138, 208, 244, 272, 436, 474, 595
Lsp1109I GCAGC 2 cut(s) 220, 374
LweI GCATC 3 cut(s) 17, 88, 163
MaeI CTAG 1 cut(s) 51
MaeII ACGT 2 cut(s) 338, 584
MaeIII GTNAC 3 cut(s) 155, 465, 577
MalI GATC 1 cut(s) 493
MboI GATC 1 cut(s) 491
MboII GAAGA 4 cut(s) 119, 238, 395, 401
MfeI CAATTG 2 cut(s) 177, 342
MluCI AATT 4 cut(s) 177, 237, 323, 342
MlyI GAGTC 1 cut(s) 394
MmeI TCCRAC 3 cut(s) 166, 407, 422
MnlI CCTC 3 cut(s) 57, 558, 568
Mph1103I ATGCAT 1 cut(s) 10
MseI TTAA 3 cut(s) 57, 246, 456
MspCI CTTAAG 1 cut(s) 455
MunI CAATTG 2 cut(s) 177, 342
NdeII GATC 1 cut(s) 491
NlaIII CATG 2 cut(s) 194, 208
NlaIV GGNNCC 5 cut(s) 68, 69, 305, 520, 543
NmuCI GTSAC 2 cut(s) 155, 577
NsiI ATGCAT 1 cut(s) 10
PfeI GAWTC 3 cut(s) 115, 182, 229
PflFI GACNNNGTC 1 cut(s) 583
PkrI GCNGC 2 cut(s) 210, 364
PleI GAGTC 1 cut(s) 394
PpsI GAGTC 1 cut(s) 394
PpuMI RGGWCCY 1 cut(s) 67
PshBI ATTAAT 1 cut(s) 57
PsiI TTATAA 1 cut(s) 332
Psp5II RGGWCCY 1 cut(s) 67
PspN4I GGNNCC 5 cut(s) 68, 69, 305, 520, 543
PspPI GGNCC 3 cut(s) 67, 395, 560
PspPPI RGGWCCY 1 cut(s) 67
PsyI GACNNNGTC 1 cut(s) 583
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SalI GTCGAC 1 cut(s) 619
SaqAI TTAA 3 cut(s) 57, 246, 456
SatI GCNGC 2 cut(s) 209, 363
Sau3AI GATC 1 cut(s) 491
Sau96I GGNCC 3 cut(s) 67, 395, 560
SchI GAGTC 1 cut(s) 394
SfaNI GCATC 3 cut(s) 17, 88, 163
SfcI CTRYAG 1 cut(s) 481
SinI GGWCC 3 cut(s) 67, 395, 560
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
Sse9I AATT 4 cut(s) 177, 237, 323, 342
SspMI CTAG 1 cut(s) 51
StyI CCWWGG 2 cut(s) 50, 563
TaaI ACNGT 3 cut(s) 147, 373, 485
TaiI ACGT 2 cut(s) 341, 587
TaqI TCGA 2 cut(s) 573, 620
TasI AATT 4 cut(s) 177, 237, 323, 342
TatI WGTACW 1 cut(s) 255
TfiI GAWTC 3 cut(s) 115, 182, 229
Tru1I TTAA 3 cut(s) 57, 246, 456
Tru9I TTAA 3 cut(s) 57, 246, 456
TscAI CASTG 2 cut(s) 376, 490
TseFI GTSAC 2 cut(s) 155, 577
TseI GCWGC 2 cut(s) 208, 362
Tsp45I GTSAC 2 cut(s) 155, 577
TspDTI ATGAA 2 cut(s) 45, 316
TspGWI ACGGA 1 cut(s) 303
TspRI CASTG 2 cut(s) 376, 490
Tth111I GACNNNGTC 1 cut(s) 583
Vha464I CTTAAG 1 cut(s) 455
VpaK11BI GGWCC 3 cut(s) 67, 395, 560
VspI ATTAAT 1 cut(s) 57
XapI RAATTY 1 cut(s) 323
XmaJI CCTAGG 1 cut(s) 50
XmiI GTMKAC 1 cut(s) 620
XspI CTAG 1 cut(s) 51
Zsp2I ATGCAT 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.