Prupe.7G211700_v2.0.a1

ubiE/COQ5 methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0007355
Physical Location & Seq
Forward (+)
19330933 .. 19334353
3421 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G211700.1

Sequence Viewer

Length: 951 bp
ATGCCCAAATGCATTGGCCTCAGACTCTCTCCTAGACTGCCAACGTTGGCGGGTATATGTCCTTCTTCTTCATCATCTCATTCGGGTCCTAGCGCTGTTGGGTCTGTTCCCATTCTAGCAAAAGCACTAAACAAGTGGAAAACTGGAGGCAGAGCGCCTCGCCGTTTGGTGTTGGGCCTGGGGGTCTCATTTTGGGCTCAATTGATGAACATGTCTGGTGCTGTTGGTGGCAAGTCTTTCACGGCCTCTGCAAGGCTCAAGAGCGGTCCTTCTTTTGAAGAGATATTGAAGAATGTGGAATGGCCGGAGCAGTTTCCCTTCAAGGAGGAGGATTTCAAGCGCTTTGATGAGTCATCAGATCAATTGTTTTATGAGGCTCCACGCTTTGTGACACATATTGATGATCCAGCCATTGCGGCGCTGACCAAGTACTATTCGAAGGTGTTTCCTCCTAGCAACAGTCCAGGAGTGTGCATCCTGGATATGTGTAGCAGTTGGGTCAGTCACTTCCCACCGGGATACAAGCAAGAGCAAATAGTTGGGATGGGCATGAATGAAGAAGAGCTCAAGCGGAATCCAGTTTTGACAGAGTATGTTGTGCAAGACTTGAATGTGAACCCTAAACTTCCCTTTGAAGACAATTCCTTTGATGTGATTACTAATGTGGTTAGTGTTGATTATATAACAAAGCCTCTAGATGTTTTCAAGGAAATGCGCCGGATTCTTAAGCCTGGTGGACTTGCTATAATGAGTTTTTCCAACCGTTGTTTCTGGACTAAAGCAATCTCAATATGGACATCAACTGGTGATGCTGATCATGGTTTGATCGTCGGATCCTATTTCCACTACGCCGGAGGATTTGAACCACCTCAGGGGGTGGATATATCTCCCAACCCTGGACGCTCAGATCCCATGTACATTGTATACTCTAGAAAATTATCTACGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11

Protein Analysis

317

Amino Acids

34.93

Weight (kDa)

8.18

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 264
AccI GTMKAC 1 cut(s) 924
AciI CCGC 4 cut(s) 50, 264, 416, 571
AclI AACGTT 1 cut(s) 44
AclWI GGATC 4 cut(s) 398, 828, 841, 902
AcoI YGGCCR 1 cut(s) 302
AfaI GTAC 2 cut(s) 431, 917
AfeI AGCGCT 2 cut(s) 94, 341
AfiI CCNNNNNNNGG 3 cut(s) 252, 872, 896
AflII CTTAAG 1 cut(s) 725
AflIII ACRYGT 1 cut(s) 210
AgsI TTSAA 8 cut(s) 278, 289, 322, 337, 610, 635, 706, 863
AjnI CCWGG 5 cut(s) 177, 463, 477, 730, 895
AjuI GAANNNNNNNTTGG 2 cut(s) 752, 784
AluBI AGCT 1 cut(s) 565
AluI AGCT 1 cut(s) 565
Alw21I GWGCWC 1 cut(s) 567
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 4 cut(s) 398, 828, 841, 902
Aor51HI AGCGCT 2 cut(s) 94, 341
AoxI GGCC 4 cut(s) 16, 175, 243, 302
ArsI GACNNNNNNTTYG 2 cut(s) 629, 661
AspLEI GCGC 5 cut(s) 95, 157, 342, 421, 717
AspS9I GGNCC 3 cut(s) 86, 175, 266
AsuC2I CCSGG 1 cut(s) 516
AsuHPI GGTGA 1 cut(s) 818
AsuII TTCGAA 1 cut(s) 437
AvaII GGWCC 2 cut(s) 86, 266
AxyI CCTNAGG 1 cut(s) 870
BamHI GGATCC 1 cut(s) 833
BanII GRGCYC 2 cut(s) 199, 567
BarI GAAGNNNNNNTAC 2 cut(s) 46, 78
BbsI GAAGAC 1 cut(s) 642
Bbv12I GWGCWC 1 cut(s) 567
BccI CCATC 1 cut(s) 538
BceAI ACGGC 2 cut(s) 147, 258
BciT130I CCWGG 5 cut(s) 179, 465, 479, 732, 897
BciVI GTATCC 1 cut(s) 512
BclI TGATCA 1 cut(s) 814
BcnI CCSGG 1 cut(s) 516
BcoDI GTCTC 1 cut(s) 190
BfaI CTAG 6 cut(s) 33, 90, 116, 453, 695, 930
BfoI RGCGCY 4 cut(s) 96, 158, 343, 422
BfrI CTTAAG 1 cut(s) 725
BfuI GTATCC 1 cut(s) 512
BglI GCCNNNNNGGC 1 cut(s) 416
BisI GCNGC 1 cut(s) 417
BlsI GCNGC 1 cut(s) 418
BmcAI AGTACT 1 cut(s) 431
Bme1390I CCNGG 6 cut(s) 179, 465, 479, 516, 732, 897
Bme18I GGWCC 2 cut(s) 86, 266
BmgT120I GGNCC 3 cut(s) 86, 175, 266
BmiI GGNNCC 3 cut(s) 87, 378, 835
BmrFI CCNGG 6 cut(s) 179, 465, 479, 516, 732, 897
BmsI GCATC 2 cut(s) 483, 799
BpiI GAAGAC 1 cut(s) 642
BpmI CTGGAG 1 cut(s) 165
Bpu14I TTCGAA 1 cut(s) 437
BpuEI CTTGAG 2 cut(s) 242, 551
BpuMI CCSGG 1 cut(s) 516
BsaBI GATNNNNATC 1 cut(s) 813
BsaI GGTCTC 1 cut(s) 190
BsaJI CCNNGG 2 cut(s) 178, 895
Bsc4I CCNNNNNNNGG 3 cut(s) 252, 872, 896
Bse1I ACTGG 3 cut(s) 148, 578, 808
Bse21I CCTNAGG 1 cut(s) 870
Bse3DI GCAATG 1 cut(s) 411
Bse8I GATNNNNATC 1 cut(s) 813
BseBI CCWGG 5 cut(s) 179, 465, 479, 732, 897
BseDI CCNNGG 2 cut(s) 178, 895
BseGI GGATG 2 cut(s) 474, 549
BseJI GATNNNNATC 1 cut(s) 813
BseLI CCNNNNNNNGG 3 cut(s) 252, 872, 896
BseMI GCAATG 1 cut(s) 411
BseMII CTCAG 3 cut(s) 34, 884, 918
BseNI ACTGG 3 cut(s) 148, 578, 808
BseRI GAGGAG 1 cut(s) 341
BshFI GGCC 4 cut(s) 18, 177, 245, 304
BsiHKAI GWGCWC 1 cut(s) 567
BsiSI CCGG 4 cut(s) 305, 515, 718, 852
BslI CCNNNNNNNGG 3 cut(s) 252, 872, 896
BsmAI GTCTC 1 cut(s) 190
BsnI GGCC 4 cut(s) 18, 177, 245, 304
Bso31I GGTCTC 1 cut(s) 190
Bsp119I TTCGAA 1 cut(s) 437
Bsp1286I GDGCHC 2 cut(s) 199, 567
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 6 cut(s) 358, 403, 814, 825, 833, 907
BspACI CCGC 4 cut(s) 50, 264, 416, 571
BspANI GGCC 4 cut(s) 18, 177, 245, 304
BspCNI CTCAG 3 cut(s) 33, 883, 917
BspLI GGNNCC 3 cut(s) 87, 378, 835
BspPI GGATC 4 cut(s) 398, 828, 841, 902
BspQI GCTCTTC 1 cut(s) 555
BspT104I TTCGAA 1 cut(s) 437
BspTI CTTAAG 1 cut(s) 725
BspTNI GGTCTC 1 cut(s) 190
BsrBI CCGCTC 1 cut(s) 264
BsrDI GCAATG 1 cut(s) 411
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 3 cut(s) 148, 578, 808
BssECI CCNNGG 2 cut(s) 178, 895
BssMI GATC 6 cut(s) 358, 403, 814, 825, 833, 907
BssNAI GTATAC 1 cut(s) 925
Bst1107I GTATAC 1 cut(s) 925
Bst2UI CCWGG 5 cut(s) 179, 465, 479, 732, 897
Bst4CI ACNGT 3 cut(s) 461, 764, 946
Bst6I CTCTTC 2 cut(s) 273, 555
BstAFI CTTAAG 1 cut(s) 725
BstAUI TGTACA 1 cut(s) 915
BstBI TTCGAA 1 cut(s) 437
BstDEI CTNAG 3 cut(s) 20, 870, 904
BstENI CCTNNNNNAGG 1 cut(s) 250
BstF5I GGATG 2 cut(s) 474, 549
BstH2I RGCGCY 4 cut(s) 96, 158, 343, 422
BstHHI GCGC 5 cut(s) 95, 157, 342, 421, 717
BstKTI GATC 6 cut(s) 361, 406, 817, 828, 836, 910
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 6 cut(s) 358, 403, 814, 825, 833, 907
BstMWI GCNNNNNNNGC 1 cut(s) 416
BstNI CCWGG 5 cut(s) 179, 465, 479, 732, 897
BstNSI RCATGY 1 cut(s) 214
BstSCI CCNGG 6 cut(s) 177, 463, 477, 514, 730, 895
BstV2I GAAGAC 1 cut(s) 642
BstX2I RGATCY 2 cut(s) 833, 907
BstYI RGATCY 2 cut(s) 833, 907
BstZ17I GTATAC 1 cut(s) 925
Bsu36I CCTNAGG 1 cut(s) 870
BsuI GTATCC 1 cut(s) 512
BsuRI GGCC 4 cut(s) 18, 177, 245, 304
BtsCI GGATG 2 cut(s) 474, 549
CfoI GCGC 5 cut(s) 95, 157, 342, 421, 717
Cfr13I GGNCC 3 cut(s) 86, 175, 266
CseI GACGC 1 cut(s) 909
Csp6I GTAC 2 cut(s) 430, 916
CviAII CATG 4 cut(s) 211, 550, 818, 913
CviQI GTAC 2 cut(s) 430, 916
DdeI CTNAG 3 cut(s) 20, 870, 904
DpnI GATC 6 cut(s) 360, 405, 816, 827, 835, 909
DpnII GATC 6 cut(s) 358, 403, 814, 825, 833, 907
EaeI YGGCCR 1 cut(s) 302
Eam1104I CTCTTC 2 cut(s) 273, 555
EarI CTCTTC 2 cut(s) 273, 555
Ecl136II GAGCTC 1 cut(s) 565
Eco24I GRGCYC 2 cut(s) 199, 567
Eco31I GGTCTC 1 cut(s) 190
Eco47I GGWCC 2 cut(s) 86, 266
Eco47III AGCGCT 2 cut(s) 94, 341
Eco53kI GAGCTC 1 cut(s) 565
Eco81I CCTNAGG 1 cut(s) 870
EcoICRI GAGCTC 1 cut(s) 565
EcoNI CCTNNNNNAGG 1 cut(s) 250
EcoO109I RGGNCCY 1 cut(s) 86
EcoRII CCWGG 5 cut(s) 177, 463, 477, 730, 895
EcoT22I ATGCAT 1 cut(s) 14
EcoT38I GRGCYC 2 cut(s) 199, 567
FaeI CATG 4 cut(s) 214, 553, 821, 916
FatI CATG 4 cut(s) 210, 549, 817, 912
FauI CCCGC 1 cut(s) 43
FbaI TGATCA 1 cut(s) 814
FblI GTMKAC 1 cut(s) 924
Fnu4HI GCNGC 1 cut(s) 417
FokI GGATG 2 cut(s) 461, 556
FriOI GRGCYC 2 cut(s) 199, 567
Fsp4HI GCNGC 1 cut(s) 417
FspBI CTAG 6 cut(s) 33, 90, 116, 453, 695, 930
GlaI GCGC 5 cut(s) 94, 156, 341, 420, 716
GluI GCNGC 1 cut(s) 417
GsuI CTGGAG 1 cut(s) 165
HaeII RGCGCY 4 cut(s) 96, 158, 343, 422
HaeIII GGCC 4 cut(s) 18, 177, 245, 304
HapII CCGG 4 cut(s) 305, 515, 718, 852
HgaI GACGC 1 cut(s) 909
HhaI GCGC 5 cut(s) 95, 157, 342, 421, 717
Hin1II CATG 4 cut(s) 214, 553, 821, 916
Hin6I GCGC 5 cut(s) 93, 155, 340, 419, 715
HinP1I GCGC 5 cut(s) 93, 155, 340, 419, 715
HinfI GANTC 4 cut(s) 24, 350, 574, 721
HpaII CCGG 4 cut(s) 305, 515, 718, 852
HphI GGTGA 1 cut(s) 818
Hpy166II GTNNAC 3 cut(s) 616, 737, 925
Hpy188I TCNGA 4 cut(s) 23, 358, 833, 907
Hpy188III TCNNGA 4 cut(s) 259, 695, 772, 930
Hpy8I GTNNAC 3 cut(s) 616, 737, 925
Hpy99I CGWCG 1 cut(s) 833
HpyAV CCTTC 4 cut(s) 72, 279, 328, 433
HpyCH4III ACNGT 3 cut(s) 461, 764, 946
HpyCH4IV ACGT 1 cut(s) 44
HpyCH4V TGCA 4 cut(s) 12, 251, 474, 601
HpyF10VI GCNNNNNNNGC 1 cut(s) 416
HpyF3I CTNAG 3 cut(s) 20, 870, 904
HpySE526I ACGT 1 cut(s) 44
Hsp92II CATG 4 cut(s) 214, 553, 821, 916
HspAI GCGC 5 cut(s) 93, 155, 340, 419, 715
Ksp22I TGATCA 1 cut(s) 814
Kzo9I GATC 6 cut(s) 358, 403, 814, 825, 833, 907
LguI GCTCTTC 1 cut(s) 555
LmnI GCTCC 2 cut(s) 307, 382
LweI GCATC 2 cut(s) 483, 799
MaeI CTAG 6 cut(s) 33, 90, 116, 453, 695, 930
MaeII ACGT 1 cut(s) 44
MaeIII GTNAC 2 cut(s) 388, 503
MalI GATC 6 cut(s) 360, 405, 816, 827, 835, 909
MbiI CCGCTC 1 cut(s) 264
MboI GATC 6 cut(s) 358, 403, 814, 825, 833, 907
MboII GAAGA 7 cut(s) 57, 60, 290, 301, 569, 572, 647
MfeI CAATTG 2 cut(s) 200, 362
MflI RGATCY 2 cut(s) 833, 907
MhlI GDGCHC 2 cut(s) 199, 567
MluCI AATT 4 cut(s) 200, 362, 640, 935
MlyI GAGTC 2 cut(s) 18, 359
MmeI TCCRAC 2 cut(s) 783, 811
Mph1103I ATGCAT 1 cut(s) 14
MseI TTAA 1 cut(s) 726
MslI CAYNNNNRTG 1 cut(s) 399
MspCI CTTAAG 1 cut(s) 725
MspI CCGG 4 cut(s) 305, 515, 718, 852
MspR9I CCNGG 6 cut(s) 179, 465, 479, 516, 732, 897
MunI CAATTG 2 cut(s) 200, 362
MvaI CCWGG 5 cut(s) 179, 465, 479, 732, 897
MwoI GCNNNNNNNGC 1 cut(s) 416
NciI CCSGG 1 cut(s) 516
NdeII GATC 6 cut(s) 358, 403, 814, 825, 833, 907
NlaIII CATG 4 cut(s) 214, 553, 821, 916
NlaIV GGNNCC 3 cut(s) 87, 378, 835
NmuCI GTSAC 2 cut(s) 388, 503
NsiI ATGCAT 1 cut(s) 14
NspI RCATGY 1 cut(s) 214
NspV TTCGAA 1 cut(s) 437
PciI ACATGT 1 cut(s) 210
PciSI GCTCTTC 1 cut(s) 555
PfeI GAWTC 2 cut(s) 574, 721
PfoI TCCNGGA 2 cut(s) 463, 477
PkrI GCNGC 1 cut(s) 418
PleI GAGTC 2 cut(s) 18, 358
PpsI GAGTC 2 cut(s) 18, 358
PpuMI RGGWCCY 1 cut(s) 86
PscI ACATGT 1 cut(s) 210
Psp124BI GAGCTC 1 cut(s) 567
Psp1406I AACGTT 1 cut(s) 44
Psp5II RGGWCCY 1 cut(s) 86
Psp6I CCWGG 5 cut(s) 177, 463, 477, 730, 895
PspGI CCWGG 5 cut(s) 177, 463, 477, 730, 895
PspN4I GGNNCC 3 cut(s) 87, 378, 835
PspPI GGNCC 3 cut(s) 86, 175, 266
PspPPI RGGWCCY 1 cut(s) 86
PsuI RGATCY 2 cut(s) 833, 907
RsaI GTAC 2 cut(s) 431, 917
RsaNI GTAC 2 cut(s) 430, 916
RseI CAYNNNNRTG 1 cut(s) 399
SacI GAGCTC 1 cut(s) 567
SapI GCTCTTC 1 cut(s) 555
SaqAI TTAA 1 cut(s) 726
SatI GCNGC 1 cut(s) 417
Sau3AI GATC 6 cut(s) 358, 403, 814, 825, 833, 907
Sau96I GGNCC 3 cut(s) 86, 175, 266
ScaI AGTACT 1 cut(s) 431
SchI GAGTC 2 cut(s) 18, 359
ScrFI CCNGG 6 cut(s) 179, 465, 479, 516, 732, 897
SduI GDGCHC 2 cut(s) 199, 567
SetI ASST 4 cut(s) 47, 444, 567, 871
SfaNI GCATC 2 cut(s) 483, 799
SfuI TTCGAA 1 cut(s) 437
SinI GGWCC 2 cut(s) 86, 266
SmiMI CAYNNNNRTG 1 cut(s) 399
SmlI CTYRAG 3 cut(s) 257, 566, 725
SmoI CTYRAG 3 cut(s) 257, 566, 725
Sse9I AATT 4 cut(s) 200, 362, 640, 935
SsiI CCGC 4 cut(s) 50, 264, 416, 571
SspMI CTAG 6 cut(s) 33, 90, 116, 453, 695, 930
SstI GAGCTC 1 cut(s) 567
StyD4I CCNGG 6 cut(s) 177, 463, 477, 514, 730, 895
TaaI ACNGT 3 cut(s) 461, 764, 946
TaiI ACGT 1 cut(s) 47
TaqI TCGA 1 cut(s) 437
TasI AATT 4 cut(s) 200, 362, 640, 935
TatI WGTACW 2 cut(s) 429, 915
TauI GCSGC 1 cut(s) 419
TfiI GAWTC 2 cut(s) 574, 721
Tru1I TTAA 1 cut(s) 726
Tru9I TTAA 1 cut(s) 726
TseFI GTSAC 2 cut(s) 388, 503
Tsp45I GTSAC 2 cut(s) 388, 503
TspDTI ATGAA 4 cut(s) 60, 221, 566, 570
Vha464I CTTAAG 1 cut(s) 725
VpaK11BI GGWCC 2 cut(s) 86, 266
XagI CCTNNNNNAGG 1 cut(s) 250
XbaI TCTAGA 2 cut(s) 694, 929
XceI RCATGY 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 924
XspI CTAG 6 cut(s) 33, 90, 116, 453, 695, 930
ZrmI AGTACT 1 cut(s) 431
Zsp2I ATGCAT 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.