Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003927

Physical Location & Seq

Genomic Coordinates Reverse (-)

19362384 .. 19365345

Gene Structure 2962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G212400.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGTGTGCGCTGGTGACAGTTGGCAGCAAGCGCTTAAGCTCTGTGTTGAGCAGCCTTAACTCTCTGTCCCTGCGTCGCTTCTGCAGCACACTTGCACCTGGCTCCATTCATCCCACTGCAATCGTTCACCCCAATGCCGTTTTGGGTCAGGGTGTTTCAATTGGTCCCTTTTGTACTGTTGGGTCGACCGTGAAGGTTGGAAATGGCTGCCAATTATACCCGGGAAGCCATATATTCGGAAATTCAGAAGTTGGGGAGCGTTGTGTTTTGATGACTGGCGCCGTTGTTGGTGATGATCTTCCAGGCCGAACTTTGCTGGGATGTAATAATATTATTGGACACCATGCTGTGGTTGGTGTCAAATGCCAAGACTTGAAGTACAAGTCAGGGGATGAATGTTTCCTTGAGGTTGGGGACAACAATGACATCAGGGAGCATACATCAATCCACCGGTCTTCGAAGTCGAGTGATACAACAGTTATTGGGAATAATAATCTTATCATGGGTTCTTGTCATATTGCCCACGATTGCAAGATTGGAAACAGCATCATTTTTGCAAATAATACCCTTTTAGCAGGCCATGTTGTGGTGGAAGATTATGCTCACACTGCAGGGGCTGTAGTTGTTCATCAGTTCTGCCATGTTGGTTCTTTCTCTTTTATTGGTGGTGGCTCCGTGATTGCACAGGATGTTCCAAAGTACATGATGGTTGCAGGAGAAAGAGCTGAACTTCGTGGTTTAAATCTTGAGGGTCTACGACGTCATGGTTTCACAGCCCAAGAGATCAGAAGCCTGCGAACAGCTTACCAAAAAATATTCATGCCTGCTGAAATTTCGAAGGGTTTCGATGAACGTCTGGCTGACATGGAGATGCGTGATGAATTGGCTCATGTATCTGTAGTCTGTTCCATGGTGCAATCTATCCGTGACTCTTTTGAAGGAAAACGACGTGGAATATGTAAATTCAGACATTGGAATGGCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006040 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008374 GO:0008780 GO:0009987 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901135 GO:2001289

KEGG Pathways

Metabolic & Signaling

ko00540 ko01100 ko01503 map00540 map01100 map01503

Pfam Domains

Protein Families

Acetyltransf_11 Hexapep

Protein Analysis

329

Amino Acids

35.3

Weight (kDa)

7.97

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29540 AT4G29540 AT4G29540 AT4G29540
fragaria_vesca	FvH4_1g22100 FvH4_1g22100 FvH4_1g22100 FvH4_1g22100 FvH4_1g22100 FvH4_1g22100
malus_domestica	MD02G1076200.v1.1 MD13G1273400.v1.1 MD15G1204600.v1.1 MD17G1181800.v1.1
prunus_persica	Prupe.7G212400_v2.0.a1 Prupe.7G212400_v2.0.a1 Prupe.7G212400_v2.0.a1 Prupe.7G212400_v2.0.a1 Prupe.7G212400_v2.0.a1 Prupe.7G212400_v2.0.a1
pyrus_communis	pycom02g06050 pycom15g18160
rosa_chinensis	RchiOBHm_Chr2g0093061
rosa_laevigata	RLG00000016364
rosa_multiflora	Rmu_sc0006865.1_g000004
rosa_roxburghii	Rroxscaffold_2G00148550
rosa_rugosa	Rorug02G0031900 Rorug02G0032000 Rorug02G0032100.1
rosa_samantha	Rh2AG077600 Rh2BG079000 Rh2CG081300 Rh2DG076500
rosa_wichuraiana	Rw2G006860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	763
AccB1I	GGYRCC	1 cut(s)	278
AccB7I	CCANNNNNTGG	2 cut(s)	349, 586
AccI	GTMKAC	2 cut(s)	185, 754
AcsI	RAATTY	3 cut(s)	241, 831, 962
AcyI	GRCGYC	2 cut(s)	279, 760
AfaI	GTAC	3 cut(s)	175, 380, 701
AfeI	AGCGCT	1 cut(s)	32
AfiI	CCNNNNNNNGG	2 cut(s)	349, 586
AflII	CTTAAG	1 cut(s)	34
AgeI	ACCGGT	1 cut(s)	450
AgsI	TTSAA	3 cut(s)	159, 376, 938
AjiI	CACGTC	1 cut(s)	950
AjnI	CCWGG	2 cut(s)	97, 301
AluBI	AGCT	3 cut(s)	39, 725, 803
AluI	AGCT	3 cut(s)	39, 725, 803
AlwNI	CAGNNNCTG	1 cut(s)	617
Ama87I	CYCGRG	1 cut(s)	220
Aor51HI	AGCGCT	1 cut(s)	32
AoxI	GGCC	2 cut(s)	304, 577
ApeKI	GCWGC	4 cut(s)	24, 51, 84, 207
ApoI	RAATTY	3 cut(s)	241, 831, 962
AsiGI	ACCGGT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	842
AspLEI	GCGC	3 cut(s)	10, 33, 281
AspS9I	GGNCC	1 cut(s)	164
AsuC2I	CCSGG	2 cut(s)	221, 222
AsuHPI	GGTGA	3 cut(s)	25, 119, 302
AsuII	TTCGAA	2 cut(s)	458, 836
AvaI	CYCGRG	1 cut(s)	220
AvaII	GGWCC	1 cut(s)	164
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BanI	GGYRCC	1 cut(s)	278
BbsI	GAAGAC	1 cut(s)	447
BbvI	GCAGC	4 cut(s)	36, 63, 96, 194
BccI	CCATC	1 cut(s)	700
BceAI	ACGGC	2 cut(s)	122, 266
BciT130I	CCWGG	2 cut(s)	99, 303
BcnI	CCSGG	2 cut(s)	221, 222
BfmI	CTRYAG	4 cut(s)	82, 609, 618, 897
BfoI	RGCGCY	2 cut(s)	34, 282
BfrI	CTTAAG	1 cut(s)	34
BisI	GCNGC	4 cut(s)	25, 52, 85, 208
BlsI	GCNGC	4 cut(s)	26, 53, 86, 209
Bme1390I	CCNGG	4 cut(s)	99, 221, 222, 303
Bme18I	GGWCC	1 cut(s)	164
BmeT110I	CYCGRG	1 cut(s)	220
BmgBI	CACGTC	1 cut(s)	950
BmgT120I	GGNCC	1 cut(s)	164
BmiI	GGNNCC	4 cut(s)	103, 166, 280, 673
BmrFI	CCNGG	4 cut(s)	99, 221, 222, 303
BmsI	GCATC	2 cut(s)	555, 861
BpiI	GAAGAC	1 cut(s)	447
Bpu14I	TTCGAA	2 cut(s)	458, 836
BpuEI	CTTGAG	2 cut(s)	425, 767
BpuMI	CCSGG	2 cut(s)	221, 222
BsaHI	GRCGYC	2 cut(s)	279, 760
BsaJI	CCNNGG	2 cut(s)	220, 909
BsaWI	WCCGGW	1 cut(s)	450
Bsc4I	CCNNNNNNNGG	2 cut(s)	349, 586
Bse118I	RCCGGY	1 cut(s)	450
Bse1I	ACTGG	1 cut(s)	280
BseBI	CCWGG	2 cut(s)	99, 303
BseDI	CCNNGG	2 cut(s)	220, 909
BseGI	GGATG	4 cut(s)	109, 326, 397, 694
BseLI	CCNNNNNNNGG	2 cut(s)	349, 586
BseNI	ACTGG	1 cut(s)	280
BseXI	GCAGC	4 cut(s)	36, 63, 96, 194
BseYI	CCCAGC	1 cut(s)	316
Bsh1285I	CGRYCG	1 cut(s)	189
BshFI	GGCC	2 cut(s)	306, 579
BshNI	GGYRCC	1 cut(s)	278
BshTI	ACCGGT	1 cut(s)	450
BsiEI	CGRYCG	1 cut(s)	189
BsiHKCI	CYCGRG	1 cut(s)	220
BsiSI	CCGG	2 cut(s)	221, 451
BslFI	GGGAC	3 cut(s)	52, 150, 428
BslI	CCNNNNNNNGG	2 cut(s)	349, 586
BsmFI	GGGAC	3 cut(s)	52, 150, 428
BsnI	GGCC	2 cut(s)	306, 579
BsoBI	CYCGRG	1 cut(s)	220
Bsp119I	TTCGAA	2 cut(s)	458, 836
Bsp143I	GATC	2 cut(s)	295, 783
Bsp19I	CCATGG	1 cut(s)	909
BspANI	GGCC	2 cut(s)	306, 579
BspLI	GGNNCC	4 cut(s)	103, 166, 280, 673
BspMAI	CTGCAG	2 cut(s)	86, 613
BspT104I	TTCGAA	2 cut(s)	458, 836
BspT107I	GGYRCC	1 cut(s)	278
BspTI	CTTAAG	1 cut(s)	34
BsrFI	RCCGGY	1 cut(s)	450
BsrI	ACTGG	1 cut(s)	280
BssAI	RCCGGY	1 cut(s)	450
BssECI	CCNNGG	2 cut(s)	220, 909
BssMI	GATC	2 cut(s)	295, 783
BssNI	GRCGYC	2 cut(s)	279, 760
BssT1I	CCWWGG	1 cut(s)	909
Bst2UI	CCWGG	2 cut(s)	99, 303
Bst4CI	ACNGT	4 cut(s)	19, 178, 190, 478
BstACI	GRCGYC	2 cut(s)	279, 760
BstAFI	CTTAAG	1 cut(s)	34
BstBI	TTCGAA	2 cut(s)	458, 836
BstC8I	GCNNGC	4 cut(s)	29, 577, 794, 825
BstDSI	CCRYGG	1 cut(s)	909
BstF5I	GGATG	4 cut(s)	109, 326, 397, 694
BstH2I	RGCGCY	2 cut(s)	34, 282
BstHHI	GCGC	3 cut(s)	10, 33, 281
BstKTI	GATC	2 cut(s)	298, 786
BstMBI	GATC	2 cut(s)	295, 783
BstMCI	CGRYCG	1 cut(s)	189
BstMWI	GCNNNNNNNGC	3 cut(s)	30, 84, 608
BstNI	CCWGG	2 cut(s)	99, 303
BstSCI	CCNGG	4 cut(s)	97, 219, 220, 301
BstSFI	CTRYAG	4 cut(s)	82, 609, 618, 897
BstV1I	GCAGC	4 cut(s)	36, 63, 96, 194
BstV2I	GAAGAC	1 cut(s)	447
BsuRI	GGCC	2 cut(s)	306, 579
BtgI	CCRYGG	1 cut(s)	909
BtrI	CACGTC	1 cut(s)	950
BtsCI	GGATG	4 cut(s)	109, 326, 397, 694
BtsI	GCAGTG	2 cut(s)	114, 606
BtsIMutI	CAGTG	2 cut(s)	114, 606
Cac8I	GCNNGC	4 cut(s)	29, 577, 794, 825
CaiI	CAGNNNCTG	1 cut(s)	617
CfoI	GCGC	3 cut(s)	10, 33, 281
Cfr10I	RCCGGY	1 cut(s)	450
Cfr13I	GGNCC	1 cut(s)	164
Cfr9I	CCCGGG	1 cut(s)	220
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	3 cut(s)	174, 379, 700
CspAI	ACCGGT	1 cut(s)	450
CviQI	GTAC	3 cut(s)	174, 379, 700
DinI	GGCGCC	1 cut(s)	280
DpnI	GATC	2 cut(s)	297, 785
DpnII	GATC	2 cut(s)	295, 783
DraI	TTTAAA	1 cut(s)	741
Eco130I	CCWWGG	1 cut(s)	909
Eco47I	GGWCC	1 cut(s)	164
Eco47III	AGCGCT	1 cut(s)	32
Eco88I	CYCGRG	1 cut(s)	220
EcoRII	CCWGG	2 cut(s)	97, 301
EcoT14I	CCWWGG	1 cut(s)	909
EgeI	GGCGCC	1 cut(s)	280
EheI	GGCGCC	1 cut(s)	280
ErhI	CCWWGG	1 cut(s)	909
FaqI	GGGAC	3 cut(s)	52, 150, 428
FblI	GTMKAC	2 cut(s)	185, 754
Fnu4HI	GCNGC	4 cut(s)	25, 52, 85, 208
FokI	GGATG	4 cut(s)	96, 333, 404, 701
Fsp4HI	GCNGC	4 cut(s)	25, 52, 85, 208
GlaI	GCGC	3 cut(s)	9, 32, 280
GluI	GCNGC	4 cut(s)	25, 52, 85, 208
GsaI	CCCAGC	1 cut(s)	320
HaeII	RGCGCY	2 cut(s)	34, 282
HaeIII	GGCC	2 cut(s)	306, 579
HapII	CCGG	2 cut(s)	221, 451
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	3 cut(s)	10, 33, 281
Hin1I	GRCGYC	2 cut(s)	279, 760
Hin6I	GCGC	3 cut(s)	8, 31, 279
HinP1I	GCGC	3 cut(s)	8, 31, 279
HincII	GTYRAC	1 cut(s)	186
HindII	GTYRAC	1 cut(s)	186
HinfI	GANTC	1 cut(s)	929
HpaII	CCGG	2 cut(s)	221, 451
HphI	GGTGA	3 cut(s)	25, 119, 302
Hpy166II	GTNNAC	3 cut(s)	127, 186, 755
Hpy188I	TCNGA	4 cut(s)	239, 247, 788, 968
Hpy188III	TCNNGA	1 cut(s)	746
Hpy8I	GTNNAC	3 cut(s)	127, 186, 755
Hpy99I	CGWCG	3 cut(s)	78, 762, 951
HpyAV	CCTTC	3 cut(s)	187, 832, 932
HpyCH4III	ACNGT	4 cut(s)	19, 178, 190, 478
HpyCH4IV	ACGT	3 cut(s)	760, 853, 949
HpyCH4V	TGCA	9 cut(s)	84, 95, 119, 531, 557, 611, 683, 713, 916
HpyF10VI	GCNNNNNNNGC	3 cut(s)	30, 84, 608
HpySE526I	ACGT	3 cut(s)	760, 853, 949
Hsp92I	GRCGYC	2 cut(s)	279, 760
HspAI	GCGC	3 cut(s)	8, 31, 279
KasI	GGCGCC	1 cut(s)	278
Kzo9I	GATC	2 cut(s)	295, 783
LmnI	GCTCC	4 cut(s)	107, 256, 433, 677
Lsp1109I	GCAGC	4 cut(s)	36, 63, 96, 194
LweI	GCATC	2 cut(s)	555, 861
MaeII	ACGT	3 cut(s)	760, 853, 949
MaeIII	GTNAC	2 cut(s)	13, 926
MalI	GATC	2 cut(s)	297, 785
MboI	GATC	2 cut(s)	295, 783
MboII	GAAGA	3 cut(s)	290, 447, 605
MfeI	CAATTG	1 cut(s)	159
MluCI	AATT	6 cut(s)	159, 212, 241, 831, 881, 962
Mly113I	GGCGCC	1 cut(s)	279
MlyI	GAGTC	1 cut(s)	923
MmeI	TCCRAC	1 cut(s)	178
MnlI	CCTC	2 cut(s)	400, 742
MroXI	GAANNNNTTC	1 cut(s)	842
MseI	TTAA	4 cut(s)	35, 57, 740, 985
MslI	CAYNNNNRTG	3 cut(s)	132, 869, 975
MspCI	CTTAAG	1 cut(s)	34
MspI	CCGG	2 cut(s)	221, 451
MspR9I	CCNGG	4 cut(s)	99, 221, 222, 303
MunI	CAATTG	1 cut(s)	159
MvaI	CCWGG	2 cut(s)	99, 303
MwoI	GCNNNNNNNGC	3 cut(s)	30, 84, 608
NarI	GGCGCC	1 cut(s)	279
NciI	CCSGG	2 cut(s)	221, 222
NcoI	CCATGG	1 cut(s)	909
NdeII	GATC	2 cut(s)	295, 783
NlaIV	GGNNCC	4 cut(s)	103, 166, 280, 673
NmuCI	GTSAC	2 cut(s)	13, 926
NspV	TTCGAA	2 cut(s)	458, 836
PdmI	GAANNNNTTC	1 cut(s)	842
PflMI	CCANNNNNTGG	2 cut(s)	349, 586
PinAI	ACCGGT	1 cut(s)	450
PkrI	GCNGC	4 cut(s)	26, 53, 86, 209
PleI	GAGTC	1 cut(s)	923
PluTI	GGCGCC	1 cut(s)	282
PpsI	GAGTC	1 cut(s)	923
Psp6I	CCWGG	2 cut(s)	97, 301
PspFI	CCCAGC	1 cut(s)	316
PspGI	CCWGG	2 cut(s)	97, 301
PspN4I	GGNNCC	4 cut(s)	103, 166, 280, 673
PspPI	GGNCC	1 cut(s)	164
PstI	CTGCAG	2 cut(s)	86, 613
PstNI	CAGNNNCTG	1 cut(s)	617
RsaI	GTAC	3 cut(s)	175, 380, 701
RsaNI	GTAC	3 cut(s)	174, 379, 700
RseI	CAYNNNNRTG	3 cut(s)	132, 869, 975
SalI	GTCGAC	1 cut(s)	184
SaqAI	TTAA	4 cut(s)	35, 57, 740, 985
SatI	GCNGC	4 cut(s)	25, 52, 85, 208
Sau3AI	GATC	2 cut(s)	295, 783
Sau96I	GGNCC	1 cut(s)	164
SchI	GAGTC	1 cut(s)	923
ScrFI	CCNGG	4 cut(s)	99, 221, 222, 303
SetI	ASST	9 cut(s)	41, 100, 198, 411, 727, 763, 805, 856, 952
SfaNI	GCATC	2 cut(s)	555, 861
SfcI	CTRYAG	4 cut(s)	82, 609, 618, 897
SfoI	GGCGCC	1 cut(s)	280
SfuI	TTCGAA	2 cut(s)	458, 836
SinI	GGWCC	1 cut(s)	164
SmaI	CCCGGG	1 cut(s)	222
SmiMI	CAYNNNNRTG	3 cut(s)	132, 869, 975
SmlI	CTYRAG	3 cut(s)	34, 404, 746
SmoI	CTYRAG	3 cut(s)	34, 404, 746
Sse9I	AATT	6 cut(s)	159, 212, 241, 831, 881, 962
SspDI	GGCGCC	1 cut(s)	278
SspI	AATATT	2 cut(s)	331, 816
StyD4I	CCNGG	4 cut(s)	97, 219, 220, 301
StyI	CCWWGG	1 cut(s)	909
TaaI	ACNGT	4 cut(s)	19, 178, 190, 478
TaiI	ACGT	3 cut(s)	763, 856, 952
TaqI	TCGA	5 cut(s)	185, 458, 464, 836, 846
TasI	AATT	6 cut(s)	159, 212, 241, 831, 881, 962
TatI	WGTACW	3 cut(s)	173, 378, 699
Tru1I	TTAA	4 cut(s)	35, 57, 740, 985
Tru9I	TTAA	4 cut(s)	35, 57, 740, 985
TscAI	CASTG	2 cut(s)	121, 613
TseFI	GTSAC	2 cut(s)	13, 926
TseI	GCWGC	4 cut(s)	24, 51, 84, 207
Tsp45I	GTSAC	2 cut(s)	13, 926
TspDTI	ATGAA	6 cut(s)	98, 408, 617, 808, 864, 894
TspGWI	ACGGA	2 cut(s)	664, 914
TspMI	CCCGGG	1 cut(s)	220
TspRI	CASTG	2 cut(s)	121, 613
Van91I	CCANNNNNTGG	2 cut(s)	349, 586
Vha464I	CTTAAG	1 cut(s)	34
VpaK11BI	GGWCC	1 cut(s)	164
XapI	RAATTY	3 cut(s)	241, 831, 962
XcmI	CCANNNNNNNNNTGG	2 cut(s)	139, 350
XmaI	CCCGGG	1 cut(s)	220
XmiI	GTMKAC	2 cut(s)	185, 754
XmnI	GAANNNNTTC	1 cut(s)	842
ZraI	GACGTC	1 cut(s)	761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.