Prupe.7G217300_v2.0.a1

acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0012044
Physical Location & Seq
Reverse (-)
19605689 .. 19608380
2692 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G217300.1

Sequence Viewer

Length: 771 bp
ATGGCCTCCTCCGTCCACCACCTCCTCTTCCTCATCATCAACCTCCTCATAATCCCAACCACATTATTATCCCAATCCATCATCCAAATGCCGCCGAAACGACACCGCATCACGGACGATAACCTCTACTGCGACAGCTGGCGATTCTCCGTCGAGACCAACGACGCTGGAACCTGGACCAGCATTCCGTCCCGGTGCGTCGCCTTCGTCCAGGACTACATGACCGGCGACCGGTACCTGTCCGACTCGGCAGCCGTCGCGAATTACTCGCTGAGCTTCGCTCGGGGGGTTCAAATCGGAGGAGATGGTAAGGACGCTTGGGTCTTCGACATCGATGAGACTCTGCTCTCCAATTTTCCCTACTATCAGGCGCATGGATTCGGATCAGAGACCTTCGATGAAGCATCTTTTGATGAGTGGGTGGATTTGGCTAAGGCCCCTGCTCTCCCAGCTAGTTTGAAATTATACAAGGAGCTTCAGGAGTTGGGTTTCAAGATTTTTCTGTTAACTGGGCGGAGTGAACATCAGAGAAATGCCACAGCGAAAAACCTTCTATATGCACGTTACAACAATTGGGAGAGGCTGCTACTGAGAGGACCTTCTGATCAAGGAACAACGGCCACTGTCTACAAATCCGAGAAGAGATCAGATTTGATAAACGAAGGTTATCGAATTCACGGGAGCTCGGGAGATCAATGGAGTGATTTGTTGGGTTTTGCAGTGGCCCAACGATCCTTTAAACTTCCAAATCCAATGTATTACATTGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acid_phosphat_B

Protein Analysis

257

Amino Acids

28.96

Weight (kDa)

5.68

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29260 AT4G29270
fragaria_vesca FvH4_1g06500
malus_domestica MD02G1068300.v1.1
prunus_persica Prupe.7G217300_v2.0.a1
pyrus_communis pycom02g05410 pycom08g17150 pycom15g17740
rosa_chinensis RchiOBHm_Chr2g0092251
rosa_laevigata RLG00000016290
rosa_multiflora Rmu_sc0000524.1_g000032 Rmu_sc0030540.1_g000001
rosa_roxburghii Rroxscaffold_2G00149330
rosa_rugosa Rorug02G0024100
rosa_samantha Rh2AG069900 Rh2BG069400 Rh2CG070600 Rh2DG068400
rosa_wichuraiana Rw2G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 320
Acc65I GGTACC 1 cut(s) 234
AccB1I GGYRCC 1 cut(s) 234
AccI GTMKAC 1 cut(s) 627
AccII CGCG 1 cut(s) 260
AciI CCGC 3 cut(s) 92, 106, 514
AclWI GGATC 2 cut(s) 391, 726
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 1 cut(s) 672
AcuI CTGAAG 1 cut(s) 461
AfaI GTAC 1 cut(s) 236
AfiI CCNNNNNNNGG 2 cut(s) 112, 231
AgeI ACCGGT 1 cut(s) 231
AgsI TTSAA 3 cut(s) 293, 460, 493
AjnI CCWGG 2 cut(s) 173, 210
AluBI AGCT 5 cut(s) 138, 276, 452, 475, 684
AluI AGCT 5 cut(s) 138, 276, 452, 475, 684
Alw21I GWGCWC 1 cut(s) 686
Alw26I GTCTC 3 cut(s) 149, 332, 383
AlwI GGATC 2 cut(s) 391, 726
Ama87I CYCGRG 2 cut(s) 282, 685
AoxI GGCC 4 cut(s) 3, 435, 618, 723
ApeKI GCWGC 2 cut(s) 251, 583
ApoI RAATTY 1 cut(s) 672
AsiGI ACCGGT 1 cut(s) 231
Asp718I GGTACC 1 cut(s) 234
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 4 cut(s) 177, 436, 596, 724
AsuC2I CCSGG 1 cut(s) 193
AvaI CYCGRG 2 cut(s) 282, 685
AvaII GGWCC 2 cut(s) 177, 596
BanI GGYRCC 1 cut(s) 234
BanII GRGCYC 1 cut(s) 686
BbsI GAAGAC 1 cut(s) 316
Bbv12I GWGCWC 1 cut(s) 686
BbvI GCAGC 2 cut(s) 263, 570
BccI CCATC 2 cut(s) 86, 299
BceAI ACGGC 2 cut(s) 239, 633
BciT130I CCWGG 2 cut(s) 175, 212
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 1 cut(s) 193
BcoDI GTCTC 3 cut(s) 149, 332, 383
BfaI CTAG 2 cut(s) 453, 769
BisI GCNGC 3 cut(s) 92, 252, 584
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 3 cut(s) 93, 253, 585
Bme1390I CCNGG 3 cut(s) 175, 193, 212
Bme18I GGWCC 2 cut(s) 177, 596
BmeT110I CYCGRG 2 cut(s) 282, 685
BmgT120I GGNCC 4 cut(s) 177, 436, 596, 724
BmiI GGNNCC 3 cut(s) 172, 236, 438
BmrFI CCNGG 3 cut(s) 175, 193, 212
BmrI ACTGGG 1 cut(s) 519
BmsI GCATC 2 cut(s) 117, 413
BmuI ACTGGG 1 cut(s) 519
BpiI GAAGAC 1 cut(s) 316
BplI GAGNNNNNCTC 2 cut(s) 265, 297
Bpu10I CCTNAGC 1 cut(s) 432
Bpu1102I GCTNAGC 1 cut(s) 272
BpuMI CCSGG 1 cut(s) 193
Bsa29I ATCGAT 1 cut(s) 333
BsaBI GATNNNNATC 1 cut(s) 382
BsaI GGTCTC 2 cut(s) 149, 383
BsaWI WCCGGW 1 cut(s) 231
Bsc4I CCNNNNNNNGG 2 cut(s) 112, 231
Bse118I RCCGGY 2 cut(s) 224, 231
Bse1I ACTGG 1 cut(s) 514
Bse3DI GCAATG 1 cut(s) 762
Bse8I GATNNNNATC 1 cut(s) 382
BseBI CCWGG 2 cut(s) 175, 212
BseCI ATCGAT 1 cut(s) 333
BseGI GGATG 1 cut(s) 81
BseJI GATNNNNATC 1 cut(s) 382
BseLI CCNNNNNNNGG 2 cut(s) 112, 231
BseMI GCAATG 1 cut(s) 762
BseMII CTCAG 2 cut(s) 263, 581
BseNI ACTGG 1 cut(s) 514
BseRI GAGGAG 3 cut(s) 14, 35, 315
BseXI GCAGC 2 cut(s) 263, 570
BseYI CCCAGC 1 cut(s) 448
Bsh1236I CGCG 1 cut(s) 260
Bsh1285I CGRYCG 1 cut(s) 232
BshFI GGCC 4 cut(s) 5, 437, 620, 725
BshNI GGYRCC 1 cut(s) 234
BshTI ACCGGT 1 cut(s) 231
BshVI ATCGAT 1 cut(s) 333
BsiEI CGRYCG 1 cut(s) 232
BsiHKAI GWGCWC 1 cut(s) 686
BsiHKCI CYCGRG 2 cut(s) 282, 685
BsiSI CCGG 3 cut(s) 193, 225, 232
BslFI GGGAC 1 cut(s) 175
BslI CCNNNNNNNGG 2 cut(s) 112, 231
BsmAI GTCTC 3 cut(s) 149, 332, 383
BsmFI GGGAC 1 cut(s) 175
BsmI GAATGC 1 cut(s) 183
BsnI GGCC 4 cut(s) 5, 437, 620, 725
Bso31I GGTCTC 2 cut(s) 149, 383
BsoBI CYCGRG 2 cut(s) 282, 685
Bsp1286I GDGCHC 1 cut(s) 686
Bsp143I GATC 5 cut(s) 383, 604, 644, 691, 731
Bsp1720I GCTNAGC 1 cut(s) 272
Bsp68I TCGCGA 1 cut(s) 260
BspACI CCGC 3 cut(s) 92, 106, 514
BspANI GGCC 4 cut(s) 5, 437, 620, 725
BspCNI CTCAG 2 cut(s) 264, 582
BspDI ATCGAT 1 cut(s) 333
BspFNI CGCG 1 cut(s) 260
BspLI GGNNCC 3 cut(s) 172, 236, 438
BspPI GGATC 2 cut(s) 391, 726
BspT107I GGYRCC 1 cut(s) 234
BspTNI GGTCTC 2 cut(s) 149, 383
BsrDI GCAATG 1 cut(s) 762
BsrFI RCCGGY 2 cut(s) 224, 231
BsrI ACTGG 1 cut(s) 514
BssAI RCCGGY 2 cut(s) 224, 231
BssMI GATC 5 cut(s) 383, 604, 644, 691, 731
Bst2UI CCWGG 2 cut(s) 175, 212
Bst4CI ACNGT 1 cut(s) 625
Bst6I CTCTTC 2 cut(s) 32, 635
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 3 cut(s) 272, 432, 590
BstF5I GGATG 1 cut(s) 81
BstFNI CGCG 1 cut(s) 260
BstHHI GCGC 1 cut(s) 373
BstKTI GATC 5 cut(s) 386, 607, 647, 694, 734
BstMAI GTCTC 3 cut(s) 149, 332, 383
BstMBI GATC 5 cut(s) 383, 604, 644, 691, 731
BstMCI CGRYCG 1 cut(s) 232
BstMWI GCNNNNNNNGC 2 cut(s) 257, 449
BstNI CCWGG 2 cut(s) 175, 212
BstSCI CCNGG 3 cut(s) 173, 191, 210
BstUI CGCG 1 cut(s) 260
BstV1I GCAGC 2 cut(s) 263, 570
BstV2I GAAGAC 1 cut(s) 316
Bsu15I ATCGAT 1 cut(s) 333
BsuRI GGCC 4 cut(s) 5, 437, 620, 725
BsuTUI ATCGAT 1 cut(s) 333
BtsCI GGATG 1 cut(s) 81
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 2 cut(s) 621, 726
BtuMI TCGCGA 1 cut(s) 260
Cac8I GCNNGC 1 cut(s) 140
CfoI GCGC 1 cut(s) 373
Cfr10I RCCGGY 2 cut(s) 224, 231
Cfr13I GGNCC 4 cut(s) 177, 436, 596, 724
ClaI ATCGAT 1 cut(s) 333
CseI GACGC 3 cut(s) 173, 187, 323
Csp6I GTAC 1 cut(s) 235
CspAI ACCGGT 1 cut(s) 231
CviAII CATG 2 cut(s) 220, 374
CviQI GTAC 1 cut(s) 235
DdeI CTNAG 3 cut(s) 272, 432, 590
DpnI GATC 5 cut(s) 385, 606, 646, 693, 733
DpnII GATC 5 cut(s) 383, 604, 644, 691, 731
DraI TTTAAA 1 cut(s) 739
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 2 cut(s) 32, 635
EarI CTCTTC 2 cut(s) 32, 635
EciI GGCGGA 1 cut(s) 529
Ecl136II GAGCTC 1 cut(s) 684
Eco24I GRGCYC 1 cut(s) 686
Eco31I GGTCTC 2 cut(s) 149, 383
Eco47I GGWCC 2 cut(s) 177, 596
Eco53kI GAGCTC 1 cut(s) 684
Eco57I CTGAAG 1 cut(s) 461
Eco88I CYCGRG 2 cut(s) 282, 685
EcoICRI GAGCTC 1 cut(s) 684
EcoO109I RGGNCCY 2 cut(s) 436, 596
EcoRI GAATTC 1 cut(s) 672
EcoRII CCWGG 2 cut(s) 173, 210
EcoT38I GRGCYC 1 cut(s) 686
FaeI CATG 2 cut(s) 223, 377
FaiI YATR 6 cut(s) 50, 221, 375, 466, 556, 558
FaqI GGGAC 1 cut(s) 175
FatI CATG 2 cut(s) 219, 373
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 1 cut(s) 627
Fnu4HI GCNGC 3 cut(s) 92, 252, 584
FokI GGATG 1 cut(s) 68
FriOI GRGCYC 1 cut(s) 686
Fsp4HI GCNGC 3 cut(s) 92, 252, 584
FspBI CTAG 2 cut(s) 453, 769
GlaI GCGC 1 cut(s) 372
GluI GCNGC 3 cut(s) 92, 252, 584
GsaI CCCAGC 1 cut(s) 452
HaeIII GGCC 4 cut(s) 5, 437, 620, 725
HapII CCGG 3 cut(s) 193, 225, 232
HgaI GACGC 3 cut(s) 173, 187, 323
HhaI GCGC 1 cut(s) 373
Hin1II CATG 2 cut(s) 223, 377
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 507
HindII GTYRAC 1 cut(s) 507
HinfI GANTC 4 cut(s) 144, 245, 340, 378
HpaI GTTAAC 1 cut(s) 507
HpaII CCGG 3 cut(s) 193, 225, 232
Hpy166II GTNNAC 4 cut(s) 16, 507, 521, 628
Hpy188I TCNGA 8 cut(s) 244, 299, 383, 388, 528, 604, 637, 649
Hpy188III TCNNGA 5 cut(s) 154, 259, 479, 493, 687
Hpy8I GTNNAC 4 cut(s) 16, 507, 521, 628
Hpy99I CGWCG 4 cut(s) 155, 167, 203, 260
HpyAV CCTTC 5 cut(s) 214, 403, 560, 609, 656
HpyCH4III ACNGT 1 cut(s) 625
HpyCH4IV ACGT 1 cut(s) 562
HpyCH4V TGCA 2 cut(s) 560, 719
HpyF10VI GCNNNNNNNGC 2 cut(s) 257, 449
HpyF3I CTNAG 3 cut(s) 272, 432, 590
HpySE526I ACGT 1 cut(s) 562
Hsp92II CATG 2 cut(s) 223, 377
HspAI GCGC 1 cut(s) 371
KpnI GGTACC 1 cut(s) 238
Ksp22I TGATCA 1 cut(s) 604
KspAI GTTAAC 1 cut(s) 507
Kzo9I GATC 5 cut(s) 383, 604, 644, 691, 731
LmnI GCTCC 2 cut(s) 472, 681
Lsp1109I GCAGC 2 cut(s) 263, 570
LweI GCATC 2 cut(s) 117, 413
MaeI CTAG 2 cut(s) 453, 769
MaeII ACGT 1 cut(s) 562
MaeIII GTNAC 1 cut(s) 563
MalI GATC 5 cut(s) 385, 606, 646, 693, 733
MboI GATC 5 cut(s) 383, 604, 644, 691, 731
MboII GAAGA 3 cut(s) 19, 316, 652
MfeI CAATTG 1 cut(s) 571
MhlI GDGCHC 1 cut(s) 686
MluCI AATT 5 cut(s) 262, 352, 461, 571, 672
MlyI GAGTC 2 cut(s) 239, 334
MmeI TCCRAC 1 cut(s) 267
MseI TTAA 2 cut(s) 506, 738
MslI CAYNNNNRTG 1 cut(s) 86
MspA1I CMGCKG 1 cut(s) 138
MspI CCGG 3 cut(s) 193, 225, 232
MspR9I CCNGG 3 cut(s) 175, 193, 212
MunI CAATTG 1 cut(s) 571
Mva1269I GAATGC 1 cut(s) 183
MvaI CCWGG 2 cut(s) 175, 212
MvnI CGCG 1 cut(s) 260
MwoI GCNNNNNNNGC 2 cut(s) 257, 449
NciI CCSGG 1 cut(s) 193
NdeII GATC 5 cut(s) 383, 604, 644, 691, 731
NlaIII CATG 2 cut(s) 223, 377
NlaIV GGNNCC 3 cut(s) 172, 236, 438
NmeAIII GCCGAG 1 cut(s) 227
NruI TCGCGA 1 cut(s) 260
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PctI GAATGC 1 cut(s) 183
PfeI GAWTC 2 cut(s) 144, 378
PfoI TCCNGGA 1 cut(s) 210
PinAI ACCGGT 1 cut(s) 231
PkrI GCNGC 3 cut(s) 93, 253, 585
PleI GAGTC 2 cut(s) 239, 334
PpsI GAGTC 2 cut(s) 239, 334
PpuMI RGGWCCY 1 cut(s) 596
Psp124BI GAGCTC 1 cut(s) 686
Psp5II RGGWCCY 1 cut(s) 596
Psp6I CCWGG 2 cut(s) 173, 210
PspFI CCCAGC 1 cut(s) 448
PspGI CCWGG 2 cut(s) 173, 210
PspN4I GGNNCC 3 cut(s) 172, 236, 438
PspPI GGNCC 4 cut(s) 177, 436, 596, 724
PspPPI RGGWCCY 1 cut(s) 596
PvuII CAGCTG 1 cut(s) 138
RruI TCGCGA 1 cut(s) 260
RsaI GTAC 1 cut(s) 236
RsaNI GTAC 1 cut(s) 235
RseI CAYNNNNRTG 1 cut(s) 86
SacI GAGCTC 1 cut(s) 686
SaqAI TTAA 2 cut(s) 506, 738
SatI GCNGC 3 cut(s) 92, 252, 584
Sau3AI GATC 5 cut(s) 383, 604, 644, 691, 731
Sau96I GGNCC 4 cut(s) 177, 436, 596, 724
SchI GAGTC 2 cut(s) 239, 334
ScrFI CCNGG 3 cut(s) 175, 193, 212
SduI GDGCHC 1 cut(s) 686
SfaNI GCATC 2 cut(s) 117, 413
SinI GGWCC 2 cut(s) 177, 596
SmiMI CAYNNNNRTG 1 cut(s) 86
Sse9I AATT 5 cut(s) 262, 352, 461, 571, 672
SsiI CCGC 3 cut(s) 92, 106, 514
SspMI CTAG 2 cut(s) 453, 769
SstI GAGCTC 1 cut(s) 686
StyD4I CCNGG 3 cut(s) 173, 191, 210
TaaI ACNGT 1 cut(s) 625
TaiI ACGT 1 cut(s) 565
TaqI TCGA 5 cut(s) 153, 327, 333, 396, 670
TasI AATT 5 cut(s) 262, 352, 461, 571, 672
TauI GCSGC 1 cut(s) 94
TfiI GAWTC 2 cut(s) 144, 378
Tru1I TTAA 2 cut(s) 506, 738
Tru9I TTAA 2 cut(s) 506, 738
TscAI CASTG 2 cut(s) 628, 726
TseI GCWGC 2 cut(s) 251, 583
TspDTI ATGAA 1 cut(s) 414
TspGWI ACGGA 3 cut(s) 128, 139, 177
TspRI CASTG 2 cut(s) 628, 726
VpaK11BI GGWCC 2 cut(s) 177, 596
XapI RAATTY 1 cut(s) 672
XmiI GTMKAC 1 cut(s) 627
XspI CTAG 2 cut(s) 453, 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.