Rorug02G0024100

leucine-rich repeat extensin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012044
Physical Location & Seq
Forward (+)
1897389 .. 1904342
6954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0024100.1

Sequence Viewer

Length: 2175 bp
ATGGCCGACGAAGCTATCATGGACCTTCCCTTACCGGAACGCGCCCCCATTCCCTCCGGCGATCACTCCGTCTGGGCCGACGTGTCGCCGCTCCTCGACGCCGCGTGTAAAGATCTTCAAGATGGCATGCTCATTCATGGAGATAATTTCAATCTTTTTGCTGCCATGTCTGCTTTAGAGATAATGGACCCAAAGATGGATTCCGGTATCGTTTGTAAATACTACTCTGTTGACGAAGCAATTGAGGATGGTGCTGCTCCAGTTCCTATTAGCTCTGATAGAACGGTGGATGTTCAGTGCACTATTGATATTATGGACCATCTTCTAGCGTGTGAGGCGACATGGCACAAGGGTCATTCATTGGCTCAAACTATCTTCTCTTGCATCTATCTTCTCCGGCCTGATAGGACATCTTCACATGCATTACTACATTCTTATTGCAAAGTCGTACGAGCAACCTGCAAGACGGTCATTTCAGTTGTCTCAGATGCACGCACTCATGAAGAAGAAGACCTCTTTACAATGTCATATGGTCTGGCTTTGCATGGGGATGGAGATGATAAGTGCTTGTCAATGCTAAATGCTGTTGAAGAAACAGTTAATCGCCAATTACGTGCTTGTAAAGCCCCATCGTCAAAAAGAAGAGTGTTAGAAGACTTTGTGCCACTGCAAAATAATCTTGAATTGGAGGAAGCCTACTGCAAAGCTTTGTTATGCCGCTTACGTTTTCGTAAGCATTTTTATCATGTTCTTACTTGCATGAGACGTCCTCAAGGGAGAGGTTTGGAGTTGGCAAGAAAGCATATAGCCTCCTGCATATCAGAATTACAGTGCATGCTTAACTCATCGGAGTTCCTTAGATCTAGGTCTCCTGGAACTCATGAAGGAAGTATAGAAGATAAAACTACTGCTTCTGGCTGTCAAGCAATTGGATTTGATGCTAGTTTAAACTGTAGATTATCTGCTCCAACACCACCACGCGCAATACAAATTCTTAGTTGGAAAAAGGCTATTGAATATTTTATGAAACTTCTTCACGATCTGGATGTCATATGTTCCTACCCATTGGACCCATCTTTAGAAAGTGTTCTGCACTTTGTGGTTGAATTCCAAAAATCTTTGCCTGATTTAGTAGCAAGAGCTCATCTTCAGCGTCTGCTTGTTGAAGATGGGAAACTCTATGGCCGGGATCCTCTCTTTGGTGTTATTACCAGAGCTGCAGCTGTACCTGATTCTATAAGGAACCATGATATGCAGAAACATGAATCAATTGTTCACCTGGGACAGTTGGTAATCAACTTGCTAAAAATTTTATGTACGAATAGTGCGTGGCAAAGGCGTAAGCTTGGAAAGATTTTACAAGATTGGCGTGTTGTCTACATACAGCTAGAGATGGCCTTTAGAAAGGAGTCGGGGGAAAACACAGATTCTTCAAATGATGAGAATGCGTGCATGAATATAGTCCAACACATCCTTGTTTGGGTGGAGGAGCAAACGTACTGGATTGCTTCTCGATTTCTCATTTTAGGTTTTGAATTGGAGCTATATTCACAAAGTGAATATTGCATGGTATATTGGTACATCTATGTTGTCCTGATCAAGATTTTAGAGAAAAAGTCTCTTAAAATGGCCGCGAGCAATGACAGTGGTAAACGAAGGGGAAAGAAGAAGAGGGATTCTGTTAAAGATGTGGCAAGGGATATTCGGATTCCGCCTGCAATCTTGTTTCTTCAATGCCAAATATGTCTTGCAGAGGGACTAGCAATGATGCTTGCTGCTTTGAGGAATGAACGTATGACGGTACAAAGTCCAAGCCCTTTTAATACTGAGCATGAGAGATTTAGTCAGCACTTTGAGCTTCTACAAAAGGCTTGCATTCCTGATCAAGTCTCGTACCCCTTGTTTAAGGATTCTACTACTCATGCTCGTTTACTGAACCTAGTTAGGTATGATCACTTTAAAGATGCTCAGAAGATTGTGAAGGAGGTAAAAAGCAGTTTTTCCAACAACCCAGAAAAATCTGCCGAACTACGAAGGCTAGAGCAAGTAGCCGAGCACAATAGCATTGCCTTAAACATAATCTCCCGAGCCGGAGCCCTTGACCCCTCACTGAAGTTATCATTCGAGTTCAACCACCATCCTTATTTCGCAACAGCTGTTGTTAAGAGATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

724

Amino Acids

82.06

Weight (kDa)

6.62

Isoelectric Point (pI)

53.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mak10 PF04112 42 - 181 9.1e-27 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
TPR_NAA35 PF25789 351 - 719 8.8e-144 NAA35-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29260 AT4G29270
fragaria_vesca FvH4_1g06500
malus_domestica MD02G1068300.v1.1
prunus_persica Prupe.7G217300_v2.0.a1
pyrus_communis pycom02g05410 pycom08g17150 pycom15g17740
rosa_chinensis RchiOBHm_Chr2g0092251
rosa_laevigata RLG00000016290
rosa_multiflora Rmu_sc0000524.1_g000032 Rmu_sc0030540.1_g000001
rosa_roxburghii Rroxscaffold_2G00149330
rosa_rugosa Rorug02G0024100
rosa_samantha Rh2AG069900 Rh2BG069400 Rh2CG070600 Rh2DG068400
rosa_wichuraiana Rw2G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 769
Acc36I ACCTGC 1 cut(s) 467
AccBSI CCGCTC 1 cut(s) 91
AccI GTMKAC 1 cut(s) 1377
AccII CGCG 4 cut(s) 42, 104, 981, 1634
AciI CCGC 5 cut(s) 89, 102, 718, 1632, 1712
AclWI GGATC 2 cut(s) 1184, 1197
AcoI YGGCCR 3 cut(s) 3, 1183, 1629
AcsI RAATTY 3 cut(s) 990, 1106, 1308
AcuI CTGAAG 2 cut(s) 1133, 2132
AcyI GRCGYC 2 cut(s) 99, 766
AdeI CACNNNGTG 2 cut(s) 1099, 1556
AfaI GTAC 7 cut(s) 450, 1227, 1318, 1499, 1580, 1803, 1895
AfiI CCNNNNNNNGG 3 cut(s) 196, 1199, 1480
AflIII ACRYGT 1 cut(s) 81
AjiI CACGTC 1 cut(s) 82
AjnI CCWGG 2 cut(s) 871, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 184, 216
Alw21I GWGCWC 3 cut(s) 302, 1144, 2058
Alw26I GTCTC 5 cut(s) 487, 757, 873, 1623, 1894
Alw44I GTGCAC 1 cut(s) 298
AlwI GGATC 2 cut(s) 1184, 1197
AlwNI CAGNNNCTG 1 cut(s) 1156
Ama87I CYCGRG 1 cut(s) 2085
AoxI GGCC 6 cut(s) 3, 75, 398, 1183, 1395, 1629
ApaLI GTGCAC 1 cut(s) 298
ApeKI GCWGC 5 cut(s) 161, 254, 1217, 1220, 1775
ApoI RAATTY 3 cut(s) 990, 1106, 1308
Asp700I GAANNNNTTC 1 cut(s) 1086
AspLEI GCGC 2 cut(s) 44, 983
AspS9I GGNCC 5 cut(s) 22, 75, 187, 316, 1069
AsuC2I CCSGG 1 cut(s) 1187
AsuHPI GGTGA 1 cut(s) 1268
AvaI CYCGRG 1 cut(s) 2085
AvaII GGWCC 4 cut(s) 22, 187, 316, 1069
BaeGI GKGCMC 1 cut(s) 302
BamHI GGATCC 1 cut(s) 1189
BanII GRGCYC 2 cut(s) 1144, 2098
BbsI GAAGAC 2 cut(s) 516, 660
Bbv12I GWGCWC 3 cut(s) 302, 1144, 2058
BbvI GCAGC 5 cut(s) 148, 241, 1204, 1232, 1762
BcgI CGANNNNNNTGC 2 cut(s) 441, 475
BciT130I CCWGG 2 cut(s) 873, 1280
BclI TGATCA 3 cut(s) 1596, 1882, 1951
BcnI CCSGG 1 cut(s) 1187
BcoDI GTCTC 5 cut(s) 487, 757, 873, 1623, 1894
BfaI CTAG 7 cut(s) 326, 864, 942, 1388, 1760, 1940, 2039
BfmI CTRYAG 2 cut(s) 952, 1218
BfuAI ACCTGC 1 cut(s) 467
BglII AGATCT 3 cut(s) 112, 860, 2168
BisI GCNGC 9 cut(s) 89, 102, 162, 255, 718, 1218, 1221, 1632, 1776
BlsI GCNGC 9 cut(s) 90, 103, 163, 256, 719, 1219, 1222, 1633, 1777
Bme1390I CCNGG 3 cut(s) 873, 1187, 1280
Bme18I GGWCC 4 cut(s) 22, 187, 316, 1069
BmeT110I CYCGRG 1 cut(s) 2085
BmgBI CACGTC 1 cut(s) 82
BmgT120I GGNCC 5 cut(s) 22, 75, 187, 316, 1069
BmiI GGNNCC 5 cut(s) 189, 1071, 1191, 1244, 2095
BmrFI CCNGG 3 cut(s) 873, 1187, 1280
BmsI GCATC 5 cut(s) 393, 478, 928, 1758, 1954
BpiI GAAGAC 2 cut(s) 516, 660
BplI GAGNNNNNCTC 2 cut(s) 754, 786
BpmI CTGGAG 1 cut(s) 243
BpuEI CTTGAG 1 cut(s) 756
BpuMI CCSGG 1 cut(s) 1187
BsaAI YACGTR 1 cut(s) 614
BsaHI GRCGYC 2 cut(s) 99, 766
BsaI GGTCTC 1 cut(s) 873
BsaJI CCNNGG 1 cut(s) 1279
BsaWI WCCGGW 2 cut(s) 34, 203
BsaXI ACNNNNNCTCC 4 cut(s) 1481, 1511, 2066, 2096
Bsc4I CCNNNNNNNGG 3 cut(s) 196, 1199, 1480
Bse1I ACTGG 2 cut(s) 260, 1505
Bse3DI GCAATG 3 cut(s) 1645, 1770, 2064
BseBI CCWGG 2 cut(s) 873, 1280
BseDI CCNNGG 1 cut(s) 1279
BseGI GGATG 6 cut(s) 253, 295, 556, 1051, 1470, 2137
BseLI CCNNNNNNNGG 3 cut(s) 196, 1199, 1480
BseMI GCAATG 3 cut(s) 1645, 1770, 2064
BseMII CTCAG 3 cut(s) 498, 1818, 1982
BseNI ACTGG 2 cut(s) 260, 1505
BseRI GAGGAG 2 cut(s) 83, 1502
BseSI GKGCMC 1 cut(s) 302
BseXI GCAGC 5 cut(s) 148, 241, 1204, 1232, 1762
BsgI GTGCAG 1 cut(s) 1076
Bsh1236I CGCG 4 cut(s) 42, 104, 981, 1634
BshFI GGCC 6 cut(s) 5, 77, 400, 1185, 1397, 1631
BsiHKAI GWGCWC 3 cut(s) 302, 1144, 2058
BsiHKCI CYCGRG 1 cut(s) 2085
BsiSI CCGG 6 cut(s) 35, 57, 204, 397, 1186, 2091
BsiWI CGTACG 1 cut(s) 448
BslFI GGGAC 2 cut(s) 1296, 1770
BslI CCNNNNNNNGG 3 cut(s) 196, 1199, 1480
BsmAI GTCTC 5 cut(s) 487, 757, 873, 1623, 1894
BsmBI CGTCTC 1 cut(s) 757
BsmFI GGGAC 2 cut(s) 1296, 1770
BsmI GAATGC 2 cut(s) 1450, 1875
BsnI GGCC 6 cut(s) 5, 77, 400, 1185, 1397, 1631
Bso31I GGTCTC 1 cut(s) 873
BsoBI CYCGRG 1 cut(s) 2085
Bsp1286I GDGCHC 4 cut(s) 302, 1144, 2058, 2098
Bsp143I GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
BspACI CCGC 5 cut(s) 89, 102, 718, 1632, 1712
BspANI GGCC 6 cut(s) 5, 77, 400, 1185, 1397, 1631
BspCNI CTCAG 3 cut(s) 497, 1819, 1981
BspFNI CGCG 4 cut(s) 42, 104, 981, 1634
BspHI TCATGA 2 cut(s) 499, 880
BspLI GGNNCC 5 cut(s) 189, 1071, 1191, 1244, 2095
BspMAI CTGCAG 1 cut(s) 1222
BspMI ACCTGC 1 cut(s) 467
BspPI GGATC 2 cut(s) 1184, 1197
BspTNI GGTCTC 1 cut(s) 873
BsrBI CCGCTC 1 cut(s) 91
BsrDI GCAATG 3 cut(s) 1645, 1770, 2064
BsrI ACTGG 2 cut(s) 260, 1505
BssECI CCNNGG 1 cut(s) 1279
BssMI GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
BssNI GRCGYC 2 cut(s) 99, 766
Bst2UI CCWGG 2 cut(s) 873, 1280
Bst4CI ACNGT 8 cut(s) 286, 469, 598, 831, 953, 1287, 1646, 1801
Bst6I CTCTTC 2 cut(s) 637, 1664
BstACI GRCGYC 2 cut(s) 99, 766
BstBAI YACGTR 1 cut(s) 614
BstC8I GCNNGC 8 cut(s) 128, 493, 836, 1450, 1636, 1716, 1773, 1873
BstDEI CTNAG 5 cut(s) 484, 857, 995, 1827, 1968
BstF5I GGATG 6 cut(s) 253, 295, 556, 1051, 1470, 2137
BstFNI CGCG 4 cut(s) 42, 104, 981, 1634
BstHHI GCGC 2 cut(s) 44, 983
BstKTI GATC 9 cut(s) 64, 115, 863, 1042, 1192, 1599, 1885, 1954, 2171
BstMAI GTCTC 5 cut(s) 487, 757, 873, 1623, 1894
BstMBI GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
BstMWI GCNNNNNNNGC 5 cut(s) 11, 170, 335, 623, 1855
BstNI CCWGG 2 cut(s) 873, 1280
BstNSI RCATGY 3 cut(s) 130, 422, 838
BstSCI CCNGG 3 cut(s) 871, 1185, 1278
BstSFI CTRYAG 2 cut(s) 952, 1218
BstSLI GKGCMC 1 cut(s) 302
BstUI CGCG 4 cut(s) 42, 104, 981, 1634
BstV1I GCAGC 5 cut(s) 148, 241, 1204, 1232, 1762
BstV2I GAAGAC 2 cut(s) 516, 660
BstX2I RGATCY 4 cut(s) 112, 860, 1189, 2168
BstYI RGATCY 4 cut(s) 112, 860, 1189, 2168
BsuRI GGCC 6 cut(s) 5, 77, 400, 1185, 1397, 1631
BtrI CACGTC 1 cut(s) 82
BtsCI GGATG 6 cut(s) 253, 295, 556, 1051, 1470, 2137
BtsI GCAGTG 1 cut(s) 665
BtsIMutI CAGTG 5 cut(s) 302, 665, 836, 1651, 2108
BveI ACCTGC 1 cut(s) 467
Cac8I GCNNGC 8 cut(s) 128, 493, 836, 1450, 1636, 1716, 1773, 1873
CaiI CAGNNNCTG 1 cut(s) 1156
CciI TCATGA 2 cut(s) 499, 880
CfoI GCGC 2 cut(s) 44, 983
Cfr13I GGNCC 5 cut(s) 22, 75, 187, 316, 1069
CseI GACGC 2 cut(s) 107, 1142
Csp6I GTAC 7 cut(s) 449, 1226, 1317, 1498, 1579, 1802, 1894
CspCI CAANNNNNGTGG 2 cut(s) 1627, 1662
CviQI GTAC 7 cut(s) 449, 1226, 1317, 1498, 1579, 1802, 1894
DdeI CTNAG 5 cut(s) 484, 857, 995, 1827, 1968
DpnI GATC 9 cut(s) 63, 114, 862, 1041, 1191, 1598, 1884, 1953, 2170
DpnII GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
DraI TTTAAA 2 cut(s) 948, 1960
DraIII CACNNNGTG 2 cut(s) 1099, 1556
EaeI YGGCCR 3 cut(s) 3, 1183, 1629
Eam1104I CTCTTC 2 cut(s) 637, 1664
EarI CTCTTC 2 cut(s) 637, 1664
EciI GGCGGA 1 cut(s) 1701
Ecl136II GAGCTC 1 cut(s) 1142
Eco24I GRGCYC 2 cut(s) 1144, 2098
Eco31I GGTCTC 1 cut(s) 873
Eco47I GGWCC 4 cut(s) 22, 187, 316, 1069
Eco53kI GAGCTC 1 cut(s) 1142
Eco57I CTGAAG 2 cut(s) 1133, 2132
Eco88I CYCGRG 1 cut(s) 2085
EcoICRI GAGCTC 1 cut(s) 1142
EcoRI GAATTC 1 cut(s) 1106
EcoRII CCWGG 2 cut(s) 871, 1278
EcoT22I ATGCAT 1 cut(s) 424
EcoT38I GRGCYC 2 cut(s) 1144, 2098
Esp3I CGTCTC 1 cut(s) 757
FaqI GGGAC 2 cut(s) 1296, 1770
FauNDI CATATG 2 cut(s) 529, 1052
FbaI TGATCA 3 cut(s) 1596, 1882, 1951
FblI GTMKAC 1 cut(s) 1377
Fnu4HI GCNGC 9 cut(s) 89, 102, 162, 255, 718, 1218, 1221, 1632, 1776
FokI GGATG 6 cut(s) 260, 302, 563, 1058, 1457, 2124
FriOI GRGCYC 2 cut(s) 1144, 2098
Fsp4HI GCNGC 9 cut(s) 89, 102, 162, 255, 718, 1218, 1221, 1632, 1776
FspBI CTAG 7 cut(s) 326, 864, 942, 1388, 1760, 1940, 2039
GlaI GCGC 2 cut(s) 43, 982
GluI GCNGC 9 cut(s) 89, 102, 162, 255, 718, 1218, 1221, 1632, 1776
GsuI CTGGAG 1 cut(s) 243
HaeIII GGCC 6 cut(s) 5, 77, 400, 1185, 1397, 1631
HapII CCGG 6 cut(s) 35, 57, 204, 397, 1186, 2091
HgaI GACGC 2 cut(s) 107, 1142
HhaI GCGC 2 cut(s) 44, 983
Hin1I GRCGYC 2 cut(s) 99, 766
Hin6I GCGC 2 cut(s) 42, 981
HinP1I GCGC 2 cut(s) 42, 981
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 2 cut(s) 705, 1343
HinfI GANTC 8 cut(s) 200, 1232, 1265, 1409, 1427, 1676, 1708, 1910
HpaII CCGG 6 cut(s) 35, 57, 204, 397, 1186, 2091
HphI GGTGA 1 cut(s) 1268
Hpy166II GTNNAC 6 cut(s) 232, 300, 1276, 1378, 1652, 1931
Hpy188I TCNGA 6 cut(s) 277, 487, 823, 850, 1707, 1971
Hpy8I GTNNAC 6 cut(s) 232, 300, 1276, 1378, 1652, 1931
Hpy99I CGWCG 3 cut(s) 11, 83, 101
HpyAV CCTTC 5 cut(s) 35, 878, 1650, 1975, 2028
HpyCH4III ACNGT 8 cut(s) 286, 469, 598, 831, 953, 1287, 1646, 1801
HpyCH4IV ACGT 6 cut(s) 81, 613, 724, 766, 1496, 1792
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 170, 335, 623, 1855
HpyF3I CTNAG 5 cut(s) 484, 857, 995, 1827, 1968
HpySE526I ACGT 6 cut(s) 81, 613, 724, 766, 1496, 1792
Hsp92I GRCGYC 2 cut(s) 99, 766
HspAI GCGC 2 cut(s) 42, 981
Ksp22I TGATCA 3 cut(s) 1596, 1882, 1951
Kzo9I GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
LmnI GCTCC 6 cut(s) 96, 262, 970, 1489, 1540, 2093
Lsp1109I GCAGC 5 cut(s) 148, 241, 1204, 1232, 1762
LweI GCATC 5 cut(s) 393, 478, 928, 1758, 1954
MaeI CTAG 7 cut(s) 326, 864, 942, 1388, 1760, 1940, 2039
MaeII ACGT 6 cut(s) 81, 613, 724, 766, 1496, 1792
MalI GATC 9 cut(s) 63, 114, 862, 1041, 1191, 1598, 1884, 1953, 2170
MbiI CCGCTC 1 cut(s) 91
MboI GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
MfeI CAATTG 3 cut(s) 240, 927, 1269
MflI RGATCY 4 cut(s) 112, 860, 1189, 2168
MhlI GDGCHC 4 cut(s) 302, 1144, 2058, 2098
MlyI GAGTC 1 cut(s) 1418
MmeI TCCRAC 4 cut(s) 980, 992, 1489, 2028
Mph1103I ATGCAT 1 cut(s) 424
MroXI GAANNNNTTC 1 cut(s) 1086
MslI CAYNNNNRTG 1 cut(s) 549
MspA1I CMGCKG 2 cut(s) 1223, 2156
MspI CCGG 6 cut(s) 35, 57, 204, 397, 1186, 2091
MspR9I CCNGG 3 cut(s) 873, 1187, 1280
MssI GTTTAAAC 1 cut(s) 948
MunI CAATTG 3 cut(s) 240, 927, 1269
Mva1269I GAATGC 2 cut(s) 1450, 1875
MvaI CCWGG 2 cut(s) 873, 1280
MvnI CGCG 4 cut(s) 42, 104, 981, 1634
MwoI GCNNNNNNNGC 5 cut(s) 11, 170, 335, 623, 1855
NciI CCSGG 1 cut(s) 1187
NdeI CATATG 2 cut(s) 529, 1052
NdeII GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
NlaIV GGNNCC 5 cut(s) 189, 1071, 1191, 1244, 2095
NmeAIII GCCGAG 1 cut(s) 2077
NsiI ATGCAT 1 cut(s) 424
NspI RCATGY 3 cut(s) 130, 422, 838
PaeI GCATGC 2 cut(s) 130, 838
PagI TCATGA 2 cut(s) 499, 880
PcsI WCGNNNNNNNCGW 2 cut(s) 610, 1325
PctI GAATGC 2 cut(s) 1450, 1875
PdmI GAANNNNTTC 1 cut(s) 1086
PfeI GAWTC 7 cut(s) 200, 1232, 1265, 1427, 1676, 1708, 1910
Pfl23II CGTACG 1 cut(s) 448
PfoI TCCNGGA 1 cut(s) 871
PkrI GCNGC 9 cut(s) 90, 103, 163, 256, 719, 1219, 1222, 1633, 1777
PleI GAGTC 1 cut(s) 1417
PmeI GTTTAAAC 1 cut(s) 948
PpsI GAGTC 1 cut(s) 1417
Ppu21I YACGTR 1 cut(s) 614
Psp124BI GAGCTC 1 cut(s) 1144
Psp6I CCWGG 2 cut(s) 871, 1278
PspGI CCWGG 2 cut(s) 871, 1278
PspLI CGTACG 1 cut(s) 448
PspN4I GGNNCC 5 cut(s) 189, 1071, 1191, 1244, 2095
PspPI GGNCC 5 cut(s) 22, 75, 187, 316, 1069
PstI CTGCAG 1 cut(s) 1222
PstNI CAGNNNCTG 1 cut(s) 1156
PsuI RGATCY 4 cut(s) 112, 860, 1189, 2168
PvuII CAGCTG 2 cut(s) 1223, 2156
RsaI GTAC 7 cut(s) 450, 1227, 1318, 1499, 1580, 1803, 1895
RsaNI GTAC 7 cut(s) 449, 1226, 1317, 1498, 1579, 1802, 1894
RseI CAYNNNNRTG 1 cut(s) 549
SacI GAGCTC 1 cut(s) 1144
SatI GCNGC 9 cut(s) 89, 102, 162, 255, 718, 1218, 1221, 1632, 1776
Sau3AI GATC 9 cut(s) 61, 112, 860, 1039, 1189, 1596, 1882, 1951, 2168
Sau96I GGNCC 5 cut(s) 22, 75, 187, 316, 1069
SchI GAGTC 1 cut(s) 1418
ScrFI CCNGG 3 cut(s) 873, 1187, 1280
SduI GDGCHC 4 cut(s) 302, 1144, 2058, 2098
SfaNI GCATC 5 cut(s) 393, 478, 928, 1758, 1954
SfcI CTRYAG 2 cut(s) 952, 1218
SinI GGWCC 4 cut(s) 22, 187, 316, 1069
SmiMI CAYNNNNRTG 1 cut(s) 549
SmlI CTYRAG 1 cut(s) 771
SmoI CTYRAG 1 cut(s) 771
SphI GCATGC 2 cut(s) 130, 838
SsiI CCGC 5 cut(s) 89, 102, 718, 1632, 1712
SspI AATATT 2 cut(s) 1019, 1562
SspMI CTAG 7 cut(s) 326, 864, 942, 1388, 1760, 1940, 2039
SstI GAGCTC 1 cut(s) 1144
StyD4I CCNGG 3 cut(s) 871, 1185, 1278
TaaI ACNGT 8 cut(s) 286, 469, 598, 831, 953, 1287, 1646, 1801
TaiI ACGT 6 cut(s) 84, 616, 727, 769, 1499, 1795
TaqI TCGA 3 cut(s) 96, 1513, 2124
TauI GCSGC 4 cut(s) 91, 104, 720, 1634
TfiI GAWTC 7 cut(s) 200, 1232, 1265, 1427, 1676, 1708, 1910
TscAI CASTG 5 cut(s) 302, 672, 836, 1651, 2115
TseI GCWGC 5 cut(s) 161, 254, 1217, 1220, 1775
TspDTI ATGAA 8 cut(s) 125, 348, 516, 897, 1040, 1278, 1469, 1803
TspGWI ACGGA 1 cut(s) 58
TspRI CASTG 5 cut(s) 302, 672, 836, 1651, 2115
VneI GTGCAC 1 cut(s) 298
VpaK11BI GGWCC 4 cut(s) 22, 187, 316, 1069
XapI RAATTY 3 cut(s) 990, 1106, 1308
XceI RCATGY 3 cut(s) 130, 422, 838
XmiI GTMKAC 1 cut(s) 1377
XmnI GAANNNNTTC 1 cut(s) 1086
XspI CTAG 7 cut(s) 326, 864, 942, 1388, 1760, 1940, 2039
ZraI GACGTC 1 cut(s) 767
Zsp2I ATGCAT 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.