Prupe.7G227000_v2.0.a1

Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
20073576 .. 20080226
6651 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G227000.1

Sequence Viewer

Length: 2937 bp
ATGTTGGATGAAAGTAAATTTGATGTGCATTTGAAACTGTGGGCACTTCGGATCCCTCGTGAGCTTTGCAAGGTCGCCACTCGCATACTAAATGGATATTTGCTTGATAAGCCCCGCATAAAACCGATTACCGAAGACCCAACATGCGAAAAAAATCGTTACATGATATTATCTGAGAGGGTCCAAGATTCTGACCTATCTGATGTTCCTGAAAAAAATATCGATGAACTAAAGGGTTTATGCAAGATTGAAGTAGTTCCATATTCGTTGACACTTGGATACTCATATTGGGGTGCAGACCATATATTGAAGCAGATTCTGCCTCCTGGAGTGGAAGTTCCTTCATCTTTCGAAACTATAGTTAACTTTACAATCCCAAGTTACTGCGCAAAACTTGATAATCTTTGTCATGTTGCCCATCTGAATATTCATGACGAATTACTCTCCTACAAGAATGTCATTGCAAAAGTTATCTATGATAAAAATTATCCTAGAATCAAGACAATTGTTAATAAAGTCGGAACGATTGAAAATGAGTTCCGTGTGCCAAAGTTTGAAGTTTTAGCAGGGGAAGATGATATGGTTACAGAAGTGAAACAATATGGAGCGACTTTCAAGCTTGATTACAGCTTGGTCTATTGGAATTCAAGATTGGAGCATGAACATATCAGGTTGGTTTCTCAGTTTCGAGCTGGGGAAATCATATGTGACATGTTTGCAGGTATTGGTCCTTTTGCTATCCCTGCAGCACAGAAGGGATGCATAGTGTATGCAAATGACTTAAATCCGGATAGCATCCGTTATCTGAAGATCAATGCAGAAACTAACAAGGTTGATAATCGTGTTCGTGCGTACAATATTGATGCAAGAAAATTTATTTCTCAATTGATGACAGTGCCCAACAGCGATGAAAAATCAGATTCTGATATCTCCATGCTGAAGACTGGTGAGAAATGTAACGTTCAGGGCAATCAGGAACCAAAATCTGAAAATGGAAGGCTAGCTGTTGAGGTGAAAGAAGTACCAGATACTGTTATTAGTAATCGGGACGCTTTACAAGCTTCAAGCAGGAATGCTGATTCATCAGTACCTCCAGTTAAAAGACCTTCAGATAGCTGTCAATCAGAGAATGAAAGTGTTGATGGCACTAGTGCATTTGTAGCTGGTAGGAGAAAAGGAAGCAAGACTAAGAGAATGAGAGGCCCTGAGATCTCCAATGTTAAGACTTGGGAGCATGTTGATCATGTGATAATGAATCTACCTGCTTCTGCTCTTCAATTTCTAGATGCATTTAGAGGTCTGATCCAGAGAAAGTATTGGACGGGGTCTCTTCCTTGGATTCACTGCTATTGCTTCATAAGGGCCATTGAAACGCAAGAATATATTATTTCAGTGGCAGAGTCCGGTTTGAATGCCCATATAAAAGATCCAATATTTCATAGGGTTAGGGATGTCGCTCCAAACAAGAAAATGAGAATGGCACAAGAAAGAGTCTATTGGGAAATAGTACTAATTCTGGTGTTGATGAACATGGCCCAAAAAGGCACGAGCTTTGGGGTCAATTGGGGAACAATGGCAACACACCAGCTCCCACCAGAAAAGGTGGTCAAAATGCTGAAGGATAATGGGTTCAATAAACTCAAGTTGTTCGAAGCTGAAGAGAAAATATTAGCTGCTCTTATGGGGACGCAGATTGAGGTGATGCTGGCCGTACCCAATGTCATGTTGCAAGAGATGAGCCAAGATCCTGTTGCTGCAGCTACTTGGGTCGATGCCAATGTCACCAGTTACTGCTCCAATGGTGGAGTCAATATCAAGTATGTTTCTGTAGGCAATGAACCCTTCCTTAAAACATACAATGGCACCTATCTAAAAACCACATTACCAGCTCTGAAGAACATCCAAGAAGCCCTCAACAATGCAGGACTTGGGTCACAAGTCAAAGCCACCGTCCCCTTCAACGCCGACATCTACTTCTCCCCTGACTCAGACCCAGTTCCATCTACAGGAGACTTCAGGCCTGAAATTCGAGACTCCTTAATTGAGATCATCCAATACCTACATACCAATGATGCTCCATTCACAGTCAATATCTATCCTTTTCTCAGTCTCTATGGCAATACATATTTTCCTTTTGGATTTGCTTTCTTTGATGGAACAACCAAGCCCATGAAGGATGGTGATCTACTGTACACCAATGTGTTTGACGCAAACTTTGACACGCTCGTTTGGTCTCTGACCAAAGCTGGGTTCCCTGAGATGAAGATCATGGTTGGAGAGGTGGGCTGGCCAACTGATGGTGACATAAATGCCAATATAAGAAATGCCAGGAGGTTTAACCAGGGAATGATTCAACATTCCCTGAGTGGAAATGGAACCCCAGCAAGGAAAGGAAAAATTGATGTCTATCTATTCAGCCTCATCGATGAAGATGCGAAAAGCATTGCTCCTGGAAACTTTGAAAGGCACTGGGGGCTATTTGAGTATGATGGGAAGCCAAAGTATAATTTGGATTTGACAGGCTCTCTTGAAAATAAAGGCCTTGCAGCTGTGGAAGATGTAGACTATATGCTGAAGAGGTGGTGTGTTTTGGACAAAGATGCTAAAGATTTGGAGGTCTTGGTAAAAAGCATTGACTATGCTTGTACCCTCTCAGATTGTACTGCTTTGGGTTATGGGTGTTCTTGCAATAACCTCAGCCTCCGGGGAAATGCTTCTTATGCATTTAACATGTATTACCAGGTGAATAGCCAGAAAAGCTGGACGTGTGATTTCTCTGGTTTGGCTGTGGTGACTGATGAAAATCCGTCTGTTGGGGACTGCCAGTTTCCAGTGATGATTTCTTATGGTGGTCCTTCAGTGTTGCCTAGCAGTGGCCTTGCACACATGGTGATGAAAATTGTTGGAGGATATCTGTTGTATTTGGTTCTGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

979

Amino Acids

109.62

Weight (kDa)

5.83

Isoelectric Point (pI)

36.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 388
Acc36I ACCTGC 2 cut(s) 710, 1270
AccB1I GGYRCC 1 cut(s) 1862
AccB7I CCANNNNNTGG 1 cut(s) 2297
AccI GTMKAC 1 cut(s) 2562
AccIII TCCGGA 1 cut(s) 787
AciI CCGC 1 cut(s) 115
AclI AACGTT 1 cut(s) 960
AclWI GGATC 5 cut(s) 46, 59, 1297, 1421, 1739
AcoI YGGCCR 2 cut(s) 1707, 2288
AcsI RAATTY 4 cut(s) 17, 643, 872, 2025
AcuI CTGAAG 9 cut(s) 827, 959, 1092, 1637, 1677, 1913, 1999, 2594, 2841
AdeI CACNNNGTG 1 cut(s) 2890
AfaI GTAC 8 cut(s) 854, 1023, 1089, 1509, 1713, 2192, 2647, 2662
AfiI CCNNNNNNNGG 6 cut(s) 2006, 2247, 2297, 2385, 2813, 2873
AflIII ACRYGT 3 cut(s) 711, 2730, 2765
AhlI ACTAGT 1 cut(s) 1148
AjiI CACGTC 1 cut(s) 2766
AjnI CCWGG 5 cut(s) 325, 2327, 2340, 2449, 2739
AjuI GAANNNNNNNTTGG 4 cut(s) 635, 667, 2234, 2266
AleI CACNNNNGTG 1 cut(s) 2198
AloI GAACNNNNNNTCC 4 cut(s) 321, 353, 1613, 1645
Alw26I GTCTC 5 cut(s) 1332, 2004, 2025, 2114, 2238
AlwI GGATC 5 cut(s) 46, 59, 1297, 1421, 1739
AlwNI CAGNNNCTG 4 cut(s) 319, 923, 1031, 1791
Aor13HI TCCGGA 1 cut(s) 787
AoxI GGCC 8 cut(s) 1201, 1362, 1533, 1707, 2018, 2288, 2539, 2875
ApeKI GCWGC 5 cut(s) 746, 1673, 1754, 1757, 2546
ApoI RAATTY 4 cut(s) 17, 643, 872, 2025
ArsI GACNNNNNNTTYG 4 cut(s) 1935, 1967, 2198, 2230
Asp700I GAANNNNTTC 2 cut(s) 255, 2713
AspLEI GCGC 1 cut(s) 389
AspS9I GGNCC 6 cut(s) 181, 728, 1202, 1362, 1534, 2852
AsuC2I CCSGG 1 cut(s) 2705
AsuHPI GGTGA 9 cut(s) 959, 1024, 1711, 1774, 2192, 2312, 2755, 2803, 2902
AsuII TTCGAA 2 cut(s) 351, 1650
AsuNHI GCTAGC 1 cut(s) 1000
AvaII GGWCC 3 cut(s) 181, 728, 2852
BaeGI GKGCMC 2 cut(s) 46, 900
BalI TGGCCA 1 cut(s) 2290
BamHI GGATCC 1 cut(s) 51
BanI GGYRCC 1 cut(s) 1862
BauI CACGAG 2 cut(s) 57, 1546
BbsI GAAGAC 2 cut(s) 141, 947
BbvCI CCTCAGC 1 cut(s) 2696
BbvI GCAGC 5 cut(s) 758, 1660, 1741, 1769, 2558
BccI CCATC 7 cut(s) 426, 1136, 2008, 2147, 2171, 2291, 2483
BceAI ACGGC 1 cut(s) 1694
BcgI CGANNNNNNTGC 2 cut(s) 2414, 2448
BciT130I CCWGG 5 cut(s) 327, 2329, 2342, 2451, 2741
BciVI GTATCC 1 cut(s) 272
BclI TGATCA 1 cut(s) 1240
BcnI CCSGG 1 cut(s) 2705
BcoDI GTCTC 5 cut(s) 1332, 2004, 2025, 2114, 2238
BcuI ACTAGT 1 cut(s) 1148
BfaI CTAG 5 cut(s) 492, 1001, 1149, 1283, 2868
BfmI CTRYAG 5 cut(s) 357, 744, 1755, 1827, 2004
BfuAI ACCTGC 2 cut(s) 710, 1270
BfuI GTATCC 1 cut(s) 272
BglII AGATCT 1 cut(s) 1209
BisI GCNGC 5 cut(s) 747, 1674, 1755, 1758, 2547
BlsI GCNGC 5 cut(s) 748, 1675, 1756, 1759, 2548
BmcAI AGTACT 1 cut(s) 1509
Bme1390I CCNGG 6 cut(s) 327, 2329, 2342, 2451, 2705, 2741
Bme18I GGWCC 3 cut(s) 181, 728, 2852
BmgBI CACGTC 1 cut(s) 2766
BmgT120I GGNCC 6 cut(s) 181, 728, 1202, 1362, 1534, 2852
BmiI GGNNCC 6 cut(s) 53, 182, 978, 1864, 2252, 2377
BmrFI CCNGG 6 cut(s) 327, 2329, 2342, 2451, 2705, 2741
BmrI ACTGGG 2 cut(s) 1988, 2479
BmsI GCATC 9 cut(s) 749, 804, 853, 1276, 1692, 1762, 2062, 2422, 2590
BmtI GCTAGC 1 cut(s) 1004
BmuI ACTGGG 2 cut(s) 1988, 2479
BoxI GACNNNNGTC 1 cut(s) 1930
BpiI GAAGAC 2 cut(s) 141, 947
BpmI CTGGAG 2 cut(s) 348, 1077
Bpu10I CCTNAGC 1 cut(s) 2696
Bpu14I TTCGAA 2 cut(s) 351, 1650
BpuEI CTTGAG 1 cut(s) 1625
BpuMI CCSGG 1 cut(s) 2705
Bsa29I ATCGAT 2 cut(s) 222, 2424
BsaBI GATNNNNATC 4 cut(s) 2181, 2264, 2406, 2802
BsaI GGTCTC 2 cut(s) 1332, 2238
BsaJI CCNNGG 3 cut(s) 1334, 2341, 2704
BsaWI WCCGGW 2 cut(s) 787, 1403
BsaXI ACNNNNNCTCC 4 cut(s) 321, 351, 1572, 1602
Bsc4I CCNNNNNNNGG 6 cut(s) 2006, 2247, 2297, 2385, 2813, 2873
Bse1I ACTGG 7 cut(s) 949, 1094, 1785, 1994, 2474, 2824, 2831
Bse3DI GCAATG 3 cut(s) 459, 1840, 2442
Bse8I GATNNNNATC 4 cut(s) 2181, 2264, 2406, 2802
BseAI TCCGGA 1 cut(s) 787
BseBI CCWGG 5 cut(s) 327, 2329, 2342, 2451, 2741
BseCI ATCGAT 2 cut(s) 222, 2424
BseDI CCNNGG 3 cut(s) 1334, 2341, 2704
BseGI GGATG 7 cut(s) 13, 764, 795, 1456, 1899, 2049, 2182
BseJI GATNNNNATC 4 cut(s) 2181, 2264, 2406, 2802
BseLI CCNNNNNNNGG 6 cut(s) 2006, 2247, 2297, 2385, 2813, 2873
BseMI GCAATG 3 cut(s) 459, 1840, 2442
BseMII CTCAG 9 cut(s) 165, 695, 1197, 2001, 2119, 2247, 2354, 2667, 2710
BseNI ACTGG 7 cut(s) 949, 1094, 1785, 1994, 2474, 2824, 2831
BseSI GKGCMC 2 cut(s) 46, 900
BseXI GCAGC 5 cut(s) 758, 1660, 1741, 1769, 2558
BseYI CCCAGC 3 cut(s) 692, 2246, 2380
BsgI GTGCAG 1 cut(s) 315
BshFI GGCC 8 cut(s) 1203, 1364, 1535, 1709, 2020, 2290, 2541, 2877
BshNI GGYRCC 1 cut(s) 1862
BshVI ATCGAT 2 cut(s) 222, 2424
BsiSI CCGG 3 cut(s) 788, 1404, 2704
BslFI GGGAC 4 cut(s) 1061, 1699, 1937, 2831
BslI CCNNNNNNNGG 6 cut(s) 2006, 2247, 2297, 2385, 2813, 2873
BsmAI GTCTC 5 cut(s) 1332, 2004, 2025, 2114, 2238
BsmFI GGGAC 4 cut(s) 1061, 1699, 1937, 2831
BsmI GAATGC 2 cut(s) 1078, 1417
BsnI GGCC 8 cut(s) 1203, 1364, 1535, 1709, 2020, 2290, 2541, 2877
Bso31I GGTCTC 2 cut(s) 1332, 2238
Bsp119I TTCGAA 2 cut(s) 351, 1650
Bsp1286I GDGCHC 2 cut(s) 46, 900
Bsp13I TCCGGA 1 cut(s) 787
Bsp1407I TGTACA 1 cut(s) 2190
BspACI CCGC 1 cut(s) 115
BspANI GGCC 8 cut(s) 1203, 1364, 1535, 1709, 2020, 2290, 2541, 2877
BspCNI CTCAG 9 cut(s) 166, 694, 1198, 2000, 2118, 2248, 2355, 2666, 2709
BspDI ATCGAT 2 cut(s) 222, 2424
BspEI TCCGGA 1 cut(s) 787
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 6 cut(s) 53, 182, 978, 1864, 2252, 2377
BspMAI CTGCAG 2 cut(s) 748, 1759
BspMI ACCTGC 2 cut(s) 710, 1270
BspOI GCTAGC 1 cut(s) 1004
BspPI GGATC 5 cut(s) 46, 59, 1297, 1421, 1739
BspQI GCTCTTC 1 cut(s) 1278
BspT104I TTCGAA 2 cut(s) 351, 1650
BspT107I GGYRCC 1 cut(s) 1862
BspTNI GGTCTC 2 cut(s) 1332, 2238
BsrDI GCAATG 3 cut(s) 459, 1840, 2442
BsrGI TGTACA 1 cut(s) 2190
BsrI ACTGG 7 cut(s) 949, 1094, 1785, 1994, 2474, 2824, 2831
BssECI CCNNGG 3 cut(s) 1334, 2341, 2704
BssSI CACGAG 2 cut(s) 57, 1546
BssT1I CCWWGG 1 cut(s) 1334
Bst2BI CACGAG 2 cut(s) 57, 1546
Bst2UI CCWGG 5 cut(s) 327, 2329, 2342, 2451, 2741
Bst4CI ACNGT 6 cut(s) 39, 895, 1033, 1951, 2086, 2190
Bst6I CTCTTC 4 cut(s) 1278, 1335, 1653, 2570
BstAPI GCANNNNNTGC 1 cut(s) 319
BstAUI TGTACA 1 cut(s) 2190
BstBI TTCGAA 2 cut(s) 351, 1650
BstC8I GCNNGC 3 cut(s) 1002, 1707, 2288
BstF5I GGATG 7 cut(s) 13, 764, 795, 1456, 1899, 2049, 2182
BstHHI GCGC 1 cut(s) 389
BstMAI GTCTC 5 cut(s) 1332, 2004, 2025, 2114, 2238
BstMWI GCNNNNNNNGC 8 cut(s) 109, 319, 743, 1058, 1160, 2473, 2720, 2757
BstNI CCWGG 5 cut(s) 327, 2329, 2342, 2451, 2741
BstNSI RCATGY 4 cut(s) 147, 715, 1238, 2734
BstPAI GACNNNNGTC 1 cut(s) 1930
BstSCI CCNGG 6 cut(s) 325, 2327, 2340, 2449, 2703, 2739
BstSFI CTRYAG 5 cut(s) 357, 744, 1755, 1827, 2004
BstSLI GKGCMC 2 cut(s) 46, 900
BstV1I GCAGC 5 cut(s) 758, 1660, 1741, 1769, 2558
BstV2I GAAGAC 2 cut(s) 141, 947
BstX2I RGATCY 4 cut(s) 51, 1209, 1426, 1744
BstYI RGATCY 4 cut(s) 51, 1209, 1426, 1744
Bsu15I ATCGAT 2 cut(s) 222, 2424
BsuI GTATCC 1 cut(s) 272
BsuRI GGCC 8 cut(s) 1203, 1364, 1535, 1709, 2020, 2290, 2541, 2877
BsuTUI ATCGAT 2 cut(s) 222, 2424
BtgZI GCGATG 1 cut(s) 921
BtrI CACGTC 1 cut(s) 2766
BtsCI GGATG 7 cut(s) 13, 764, 795, 1456, 1899, 2049, 2182
BtsI GCAGTG 2 cut(s) 1342, 2878
BtsIMutI CAGTG 7 cut(s) 900, 1342, 1398, 2467, 2838, 2865, 2878
BveI ACCTGC 2 cut(s) 710, 1270
Cac8I GCNNGC 3 cut(s) 1002, 1707, 2288
CaiI CAGNNNCTG 4 cut(s) 319, 923, 1031, 1791
CciI TCATGA 1 cut(s) 430
CfoI GCGC 1 cut(s) 389
Cfr13I GGNCC 6 cut(s) 181, 728, 1202, 1362, 1534, 2852
ClaI ATCGAT 2 cut(s) 222, 2424
CseI GACGC 3 cut(s) 1058, 1696, 2216
CsiI ACCWGGT 1 cut(s) 2739
Csp6I GTAC 8 cut(s) 853, 1022, 1088, 1508, 1712, 2191, 2646, 2661
CviQI GTAC 8 cut(s) 853, 1022, 1088, 1508, 1712, 2191, 2646, 2661
DraIII CACNNNGTG 1 cut(s) 2890
EaeI YGGCCR 2 cut(s) 1707, 2288
Eam1104I CTCTTC 4 cut(s) 1278, 1335, 1653, 2570
EarI CTCTTC 4 cut(s) 1278, 1335, 1653, 2570
Eco130I CCWWGG 1 cut(s) 1334
Eco147I AGGCCT 2 cut(s) 2020, 2541
Eco31I GGTCTC 2 cut(s) 1332, 2238
Eco32I GATATC 2 cut(s) 928, 2912
Eco47I GGWCC 3 cut(s) 181, 728, 2852
Eco57I CTGAAG 9 cut(s) 827, 959, 1092, 1637, 1677, 1913, 1999, 2594, 2841
EcoO109I RGGNCCY 1 cut(s) 1202
EcoRI GAATTC 1 cut(s) 643
EcoRII CCWGG 5 cut(s) 325, 2327, 2340, 2449, 2739
EcoRV GATATC 2 cut(s) 928, 2912
EcoT14I CCWWGG 1 cut(s) 1334
EcoT22I ATGCAT 3 cut(s) 764, 1291, 2725
ErhI CCWWGG 1 cut(s) 1334
FaqI GGGAC 4 cut(s) 1061, 1699, 1937, 2831
FauI CCCGC 1 cut(s) 122
FauNDI CATATG 1 cut(s) 704
FbaI TGATCA 1 cut(s) 1240
FblI GTMKAC 1 cut(s) 2562
Fnu4HI GCNGC 5 cut(s) 747, 1674, 1755, 1758, 2547
FokI GGATG 7 cut(s) 20, 771, 782, 1463, 1886, 2036, 2189
Fsp4HI GCNGC 5 cut(s) 747, 1674, 1755, 1758, 2547
FspBI CTAG 5 cut(s) 492, 1001, 1149, 1283, 2868
FspI TGCGCA 1 cut(s) 388
GlaI GCGC 1 cut(s) 388
GluI GCNGC 5 cut(s) 747, 1674, 1755, 1758, 2547
GsaI CCCAGC 3 cut(s) 696, 2250, 2384
GsuI CTGGAG 2 cut(s) 348, 1077
HaeIII GGCC 8 cut(s) 1203, 1364, 1535, 1709, 2020, 2290, 2541, 2877
HapII CCGG 3 cut(s) 788, 1404, 2704
HgaI GACGC 3 cut(s) 1058, 1696, 2216
HhaI GCGC 1 cut(s) 389
Hin6I GCGC 1 cut(s) 387
HinP1I GCGC 1 cut(s) 387
HincII GTYRAC 2 cut(s) 270, 364
HindII GTYRAC 2 cut(s) 270, 364
HindIII AAGCTT 2 cut(s) 617, 1059
HpaI GTTAAC 1 cut(s) 364
HpaII CCGG 3 cut(s) 788, 1404, 2704
HphI GGTGA 9 cut(s) 959, 1024, 1711, 1774, 2192, 2312, 2755, 2803, 2902
Hpy166II GTNNAC 4 cut(s) 270, 364, 2193, 2563
Hpy8I GTNNAC 4 cut(s) 270, 364, 2193, 2563
HpyAV CCTTC 9 cut(s) 351, 748, 990, 1116, 1612, 1852, 1966, 2167, 2865
HpyCH4III ACNGT 6 cut(s) 39, 895, 1033, 1951, 2086, 2190
HpyCH4IV ACGT 2 cut(s) 960, 2765
HpyF10VI GCNNNNNNNGC 8 cut(s) 109, 319, 743, 1058, 1160, 2473, 2720, 2757
HpySE526I ACGT 2 cut(s) 960, 2765
HspAI GCGC 1 cut(s) 387
Kpn2I TCCGGA 1 cut(s) 787
Ksp22I TGATCA 1 cut(s) 1240
KspAI GTTAAC 1 cut(s) 364
LguI GCTCTTC 1 cut(s) 1278
LmnI GCTCC 8 cut(s) 605, 655, 1231, 1462, 1593, 1799, 2080, 2452
Lsp1109I GCAGC 5 cut(s) 758, 1660, 1741, 1769, 2558
LweI GCATC 9 cut(s) 749, 804, 853, 1276, 1692, 1762, 2062, 2422, 2590
MabI ACCWGGT 1 cut(s) 2739
MaeI CTAG 5 cut(s) 492, 1001, 1149, 1283, 2868
MaeII ACGT 2 cut(s) 960, 2765
MfeI CAATTG 3 cut(s) 504, 884, 1561
MflI RGATCY 4 cut(s) 51, 1209, 1426, 1744
MhlI GDGCHC 2 cut(s) 46, 900
MlsI TGGCCA 1 cut(s) 2290
MluNI TGGCCA 1 cut(s) 2290
MlyI GAGTC 5 cut(s) 1409, 1500, 1815, 1979, 2027
MmeI TCCRAC 3 cut(s) 499, 2254, 2884
Mox20I TGGCCA 1 cut(s) 2290
Mph1103I ATGCAT 3 cut(s) 764, 1291, 2725
MroI TCCGGA 1 cut(s) 787
MroXI GAANNNNTTC 2 cut(s) 255, 2713
MscI TGGCCA 1 cut(s) 2290
MseI TTAA 9 cut(s) 363, 510, 782, 1098, 1221, 1848, 2039, 2337, 2727
MslI CAYNNNNRTG 3 cut(s) 2067, 2198, 2891
Msp20I TGGCCA 1 cut(s) 2290
MspA1I CMGCKG 1 cut(s) 2549
MspI CCGG 3 cut(s) 788, 1404, 2704
MspR9I CCNGG 6 cut(s) 327, 2329, 2342, 2451, 2705, 2741
MunI CAATTG 3 cut(s) 504, 884, 1561
Mva1269I GAATGC 2 cut(s) 1078, 1417
MvaI CCWGG 5 cut(s) 327, 2329, 2342, 2451, 2741
MwoI GCNNNNNNNGC 8 cut(s) 109, 319, 743, 1058, 1160, 2473, 2720, 2757
NciI CCSGG 1 cut(s) 2705
NdeI CATATG 1 cut(s) 704
NheI GCTAGC 1 cut(s) 1000
NlaIV GGNNCC 6 cut(s) 53, 182, 978, 1864, 2252, 2377
NmuCI GTSAC 5 cut(s) 707, 1780, 1932, 2300, 2791
NsbI TGCGCA 1 cut(s) 388
NsiI ATGCAT 3 cut(s) 764, 1291, 2725
NspI RCATGY 4 cut(s) 147, 715, 1238, 2734
NspV TTCGAA 2 cut(s) 351, 1650
OliI CACNNNNGTG 1 cut(s) 2198
PagI TCATGA 1 cut(s) 430
PceI AGGCCT 2 cut(s) 2020, 2541
PciI ACATGT 2 cut(s) 711, 2730
PciSI GCTCTTC 1 cut(s) 1278
PcsI WCGNNNNNNNCGW 1 cut(s) 55
PctI GAATGC 2 cut(s) 1078, 1417
PdmI GAANNNNTTC 2 cut(s) 255, 2713
PfeI GAWTC 8 cut(s) 188, 316, 495, 920, 1079, 1255, 1339, 2350
PflFI GACNNNGTC 1 cut(s) 1324
PflMI CCANNNNNTGG 1 cut(s) 2297
PfoI TCCNGGA 2 cut(s) 325, 2449
PkrI GCNGC 5 cut(s) 748, 1675, 1756, 1759, 2548
PleI GAGTC 5 cut(s) 1408, 1499, 1814, 1979, 2027
PpsI GAGTC 5 cut(s) 1408, 1499, 1814, 1979, 2027
PscI ACATGT 2 cut(s) 711, 2730
PshAI GACNNNNGTC 1 cut(s) 1930
Psp1406I AACGTT 1 cut(s) 960
Psp6I CCWGG 5 cut(s) 325, 2327, 2340, 2449, 2739
PspFI CCCAGC 3 cut(s) 692, 2246, 2380
PspGI CCWGG 5 cut(s) 325, 2327, 2340, 2449, 2739
PspN4I GGNNCC 6 cut(s) 53, 182, 978, 1864, 2252, 2377
PspPI GGNCC 6 cut(s) 181, 728, 1202, 1362, 1534, 2852
PstI CTGCAG 2 cut(s) 748, 1759
PstNI CAGNNNCTG 4 cut(s) 319, 923, 1031, 1791
PsuI RGATCY 4 cut(s) 51, 1209, 1426, 1744
PsyI GACNNNGTC 1 cut(s) 1324
PvuII CAGCTG 1 cut(s) 2549
RsaI GTAC 8 cut(s) 854, 1023, 1089, 1509, 1713, 2192, 2647, 2662
RsaNI GTAC 8 cut(s) 853, 1022, 1088, 1508, 1712, 2191, 2646, 2661
RseI CAYNNNNRTG 3 cut(s) 2067, 2198, 2891
SapI GCTCTTC 1 cut(s) 1278
SaqAI TTAA 9 cut(s) 363, 510, 782, 1098, 1221, 1848, 2039, 2337, 2727
SatI GCNGC 5 cut(s) 747, 1674, 1755, 1758, 2547
Sau96I GGNCC 6 cut(s) 181, 728, 1202, 1362, 1534, 2852
ScaI AGTACT 1 cut(s) 1509
SchI GAGTC 5 cut(s) 1409, 1500, 1815, 1979, 2027
ScrFI CCNGG 6 cut(s) 327, 2329, 2342, 2451, 2705, 2741
SduI GDGCHC 2 cut(s) 46, 900
SexAI ACCWGGT 1 cut(s) 2739
SfaNI GCATC 9 cut(s) 749, 804, 853, 1276, 1692, 1762, 2062, 2422, 2590
SfcI CTRYAG 5 cut(s) 357, 744, 1755, 1827, 2004
SfuI TTCGAA 2 cut(s) 351, 1650
SinI GGWCC 3 cut(s) 181, 728, 2852
SmiMI CAYNNNNRTG 3 cut(s) 2067, 2198, 2891
SmlI CTYRAG 1 cut(s) 1640
SmoI CTYRAG 1 cut(s) 1640
SpeI ACTAGT 1 cut(s) 1148
SseBI AGGCCT 2 cut(s) 2020, 2541
SsiI CCGC 1 cut(s) 115
SspI AATATT 4 cut(s) 427, 859, 1434, 1668
SspMI CTAG 5 cut(s) 492, 1001, 1149, 1283, 2868
StuI AGGCCT 2 cut(s) 2020, 2541
StyD4I CCNGG 6 cut(s) 325, 2327, 2340, 2449, 2703, 2739
StyI CCWWGG 1 cut(s) 1334
TaaI ACNGT 6 cut(s) 39, 895, 1033, 1951, 2086, 2190
TaiI ACGT 2 cut(s) 963, 2768
TaqI TCGA 7 cut(s) 222, 351, 688, 1650, 1770, 2029, 2424
TatI WGTACW 3 cut(s) 1507, 2190, 2660
TfiI GAWTC 8 cut(s) 188, 316, 495, 920, 1079, 1255, 1339, 2350
Tru1I TTAA 9 cut(s) 363, 510, 782, 1098, 1221, 1848, 2039, 2337, 2727
Tru9I TTAA 9 cut(s) 363, 510, 782, 1098, 1221, 1848, 2039, 2337, 2727
TscAI CASTG 7 cut(s) 900, 1349, 1398, 2474, 2838, 2865, 2878
TseFI GTSAC 5 cut(s) 707, 1780, 1932, 2300, 2791
TseI GCWGC 5 cut(s) 746, 1673, 1754, 1757, 2546
Tsp45I GTSAC 5 cut(s) 707, 1780, 1932, 2300, 2791
TspGWI ACGGA 3 cut(s) 530, 788, 2796
TspRI CASTG 7 cut(s) 900, 1349, 1398, 2474, 2838, 2865, 2878
Tth111I GACNNNGTC 1 cut(s) 1324
Van91I CCANNNNNTGG 1 cut(s) 2297
VpaK11BI GGWCC 3 cut(s) 181, 728, 2852
XapI RAATTY 4 cut(s) 17, 643, 872, 2025
XbaI TCTAGA 1 cut(s) 1282
XceI RCATGY 4 cut(s) 147, 715, 1238, 2734
XmiI GTMKAC 1 cut(s) 2562
XmnI GAANNNNTTC 2 cut(s) 255, 2713
XspI CTAG 5 cut(s) 492, 1001, 1149, 1283, 2868
ZrmI AGTACT 1 cut(s) 1509
Zsp2I ATGCAT 3 cut(s) 764, 1291, 2725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.