Prupe.7G241800_v2.0.a1

Fasciclin-like arabinogalactan protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20766106 .. 20766985
880 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G241800.1

Sequence Viewer

Length: 747 bp
ATGGCAGCTCTCATTCTCCCAACTCTCACTGCAGCCTTCTCGTTCCTCCTCCTCTTCACCCCCACCACCCAAGCCCAAACCGCACCCGCCCCGGGCCCTGCGGGCCCGCTCAACTTCACCGGCATTCTTGACAAGAACGGCCAATACACCACCTTCATCCGCCTCCTAATCCAAACCCAAGTAGCATCCCAAATTACAAACCAACTCAACAGCTCCAGCGAGGGCCTAACCGTCTTTGCCCCGACAGACAACGCTTTCACGAGCCTCAAAGCCGGCACACTCAACACTCTCACAACCCAACAACAAGTAGCCCTTGTCCTCTACCATGTGCTGCCCAAATATTACACTATAACCAGTCTTTTAACGGTGTCAAACCCCGTTAGAACTCAGGCCACAGGCCAAGACGGCGGCGCGTACGGGCTCAACTTCACAGGGTCGGGAAACCAAGTTAATGTTTCGAGTGGGGTGGTGGAGACACAGATCAACAATGCACTTAGACAACAGTTTCCATTGGCCGTTTACCAAGTGGACAAAGTACTGTTGCCTAATGACTTGTTTGGCGCCAAGGCACCTGCATCCGCTCCTCCTCCAGCTAAGACCCCCTCATCAGGAAGCTCAAACGAAACGGCAACAAAGACTGCGTCGTCACCTGATAATTCTGAAGCTGGTTCGATTAAGAGCAATGCGAGTTTCATGGGATTGGTGTTTGGGATGATGGGTTTGCTTTTCATAGGGATTTTCTCTTAA

Protein Analysis

249

Amino Acids

25.9

Weight (kDa)

7.93

Isoelectric Point (pI)

26.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014289)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03870 AT5G44130
fragaria_vesca FvH4_1g03420
malus_domestica MD15G1174300.v1.1
prunus_persica Prupe.7G241800_v2.0.a1
pyrus_communis pycom15g15590
rosa_chinensis RchiOBHm_Chr2g0088651
rosa_laevigata RLG00000015972
rosa_multiflora Rmu_sc0006835.1_g000014 Rmu_sc0015442.1_g000011
rosa_roxburghii Rroxscaffold_2G00152430
rosa_rugosa Rorug01G0485600
rosa_samantha Rh2AG041100 Rh2BG039800 Rh2CG040600 Rh2DG040200
rosa_wichuraiana Rw2G003330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 580
AasI GACNNNNNNGTC 1 cut(s) 643
Acc36I ACCTGC 1 cut(s) 580
AccB1I GGYRCC 2 cut(s) 560, 568
AccBSI CCGCTC 2 cut(s) 109, 581
AccII CGCG 1 cut(s) 413
AciI CCGC 7 cut(s) 81, 87, 101, 107, 160, 408, 579
AcoI YGGCCR 2 cut(s) 139, 513
AcuI CTGAAG 1 cut(s) 681
AcyI GRCGYC 1 cut(s) 561
AfaI GTAC 2 cut(s) 416, 537
AfiI CCNNNNNNNGG 2 cut(s) 92, 608
AluBI AGCT 5 cut(s) 8, 213, 593, 615, 665
AluI AGCT 5 cut(s) 8, 213, 593, 615, 665
Alw26I GTCTC 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 91
AoxI GGCC 7 cut(s) 94, 103, 139, 223, 390, 397, 513
ApaI GGGCCC 2 cut(s) 98, 107
ApeKI GCWGC 3 cut(s) 5, 32, 331
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
AspLEI GCGC 2 cut(s) 413, 563
AspS9I GGNCC 5 cut(s) 94, 95, 103, 104, 223
AsuC2I CCSGG 2 cut(s) 92, 93
AsuHPI GGTGA 3 cut(s) 49, 109, 639
AvaI CYCGRG 1 cut(s) 91
BaeGI GKGCMC 2 cut(s) 98, 107
BanI GGYRCC 2 cut(s) 560, 568
BanII GRGCYC 3 cut(s) 98, 107, 423
BauI CACGAG 1 cut(s) 259
BbvI GCAGC 3 cut(s) 17, 44, 318
BccI CCATC 1 cut(s) 709
BceAI ACGGC 4 cut(s) 154, 421, 500, 642
BcgI CGANNNNNNTGC 2 cut(s) 21, 55
BcnI CCSGG 2 cut(s) 92, 93
BcoDI GTCTC 1 cut(s) 467
BfmI CTRYAG 1 cut(s) 30
BfoI RGCGCY 1 cut(s) 564
BfuAI ACCTGC 1 cut(s) 580
BglI GCCNNNNNGGC 2 cut(s) 102, 405
BisI GCNGC 4 cut(s) 6, 33, 332, 409
BlsI GCNGC 4 cut(s) 7, 34, 333, 410
BmcAI AGTACT 1 cut(s) 537
Bme1390I CCNGG 2 cut(s) 92, 93
BmeT110I CYCGRG 1 cut(s) 91
BmgT120I GGNCC 5 cut(s) 94, 95, 103, 104, 223
BmiI GGNNCC 4 cut(s) 96, 105, 562, 570
BmrFI CCNGG 2 cut(s) 92, 93
BmsI GCATC 2 cut(s) 194, 584
BpmI CTGGAG 2 cut(s) 199, 573
BpuMI CCSGG 2 cut(s) 92, 93
BsaHI GRCGYC 1 cut(s) 561
BsaJI CCNNGG 3 cut(s) 90, 91, 564
Bsc4I CCNNNNNNNGG 2 cut(s) 92, 608
Bse118I RCCGGY 2 cut(s) 119, 272
Bse1I ACTGG 1 cut(s) 354
Bse3DI GCAATG 1 cut(s) 688
BseDI CCNNGG 3 cut(s) 90, 91, 564
BseGI GGATG 4 cut(s) 156, 185, 575, 717
BseLI CCNNNNNNNGG 2 cut(s) 92, 608
BseMI GCAATG 1 cut(s) 688
BseMII CTCAG 1 cut(s) 401
BseNI ACTGG 1 cut(s) 354
BseRI GAGGAG 4 cut(s) 38, 41, 573, 576
BseSI GKGCMC 2 cut(s) 98, 107
BseXI GCAGC 3 cut(s) 17, 44, 318
Bsh1236I CGCG 1 cut(s) 413
BshFI GGCC 7 cut(s) 96, 105, 141, 225, 392, 399, 515
BshNI GGYRCC 2 cut(s) 560, 568
BsiHKCI CYCGRG 1 cut(s) 91
BsiSI CCGG 3 cut(s) 92, 120, 273
BsiWI CGTACG 1 cut(s) 414
BslI CCNNNNNNNGG 2 cut(s) 92, 608
BsmAI GTCTC 1 cut(s) 467
BsmI GAATGC 1 cut(s) 123
BsnI GGCC 7 cut(s) 96, 105, 141, 225, 392, 399, 515
BsoBI CYCGRG 1 cut(s) 91
Bsp120I GGGCCC 2 cut(s) 94, 103
Bsp1286I GDGCHC 3 cut(s) 98, 107, 423
Bsp143I GATC 1 cut(s) 480
BspACI CCGC 7 cut(s) 81, 87, 101, 107, 160, 408, 579
BspANI GGCC 7 cut(s) 96, 105, 141, 225, 392, 399, 515
BspCNI CTCAG 1 cut(s) 400
BspFNI CGCG 1 cut(s) 413
BspLI GGNNCC 4 cut(s) 96, 105, 562, 570
BspMAI CTGCAG 1 cut(s) 34
BspMI ACCTGC 1 cut(s) 580
BspT107I GGYRCC 2 cut(s) 560, 568
BsrBI CCGCTC 2 cut(s) 109, 581
BsrDI GCAATG 1 cut(s) 688
BsrFI RCCGGY 2 cut(s) 119, 272
BsrI ACTGG 1 cut(s) 354
BssAI RCCGGY 2 cut(s) 119, 272
BssECI CCNNGG 3 cut(s) 90, 91, 564
BssMI GATC 1 cut(s) 480
BssNI GRCGYC 1 cut(s) 561
BssSI CACGAG 1 cut(s) 259
BssT1I CCWWGG 1 cut(s) 564
Bst2BI CACGAG 1 cut(s) 259
Bst4CI ACNGT 4 cut(s) 232, 367, 504, 540
Bst6I CTCTTC 1 cut(s) 59
BstACI GRCGYC 1 cut(s) 561
BstC8I GCNNGC 3 cut(s) 103, 107, 274
BstDEI CTNAG 3 cut(s) 387, 494, 594
BstF5I GGATG 4 cut(s) 156, 185, 575, 717
BstFNI CGCG 1 cut(s) 413
BstH2I RGCGCY 1 cut(s) 564
BstHHI GCGC 2 cut(s) 413, 563
BstKTI GATC 1 cut(s) 483
BstMAI GTCTC 1 cut(s) 467
BstMBI GATC 1 cut(s) 480
BstMWI GCNNNNNNNGC 3 cut(s) 80, 102, 405
BstSCI CCNGG 2 cut(s) 90, 91
BstSFI CTRYAG 1 cut(s) 30
BstSLI GKGCMC 2 cut(s) 98, 107
BstUI CGCG 1 cut(s) 413
BstV1I GCAGC 3 cut(s) 17, 44, 318
BsuRI GGCC 7 cut(s) 96, 105, 141, 225, 392, 399, 515
BtsCI GGATG 4 cut(s) 156, 185, 575, 717
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 1 cut(s) 27
BveI ACCTGC 1 cut(s) 580
Cac8I GCNNGC 3 cut(s) 103, 107, 274
CfoI GCGC 2 cut(s) 413, 563
Cfr10I RCCGGY 2 cut(s) 119, 272
Cfr13I GGNCC 5 cut(s) 94, 95, 103, 104, 223
Cfr9I CCCGGG 1 cut(s) 91
CseI GACGC 1 cut(s) 630
Csp6I GTAC 2 cut(s) 415, 536
CviAII CATG 2 cut(s) 326, 694
CviQI GTAC 2 cut(s) 415, 536
DdeI CTNAG 3 cut(s) 387, 494, 594
DinI GGCGCC 1 cut(s) 562
DpnI GATC 1 cut(s) 482
DpnII GATC 1 cut(s) 480
DrdI GACNNNNNNGTC 1 cut(s) 643
DseDI GACNNNNNNGTC 1 cut(s) 643
EaeI YGGCCR 2 cut(s) 139, 513
Eam1104I CTCTTC 1 cut(s) 59
EarI CTCTTC 1 cut(s) 59
EciI GGCGGA 1 cut(s) 149
Eco130I CCWWGG 1 cut(s) 564
Eco24I GRGCYC 3 cut(s) 98, 107, 423
Eco57I CTGAAG 1 cut(s) 681
Eco88I CYCGRG 1 cut(s) 91
EcoO109I RGGNCCY 2 cut(s) 95, 223
EcoT14I CCWWGG 1 cut(s) 564
EcoT38I GRGCYC 3 cut(s) 98, 107, 423
EgeI GGCGCC 1 cut(s) 562
EheI GGCGCC 1 cut(s) 562
ErhI CCWWGG 1 cut(s) 564
FaeI CATG 2 cut(s) 329, 697
FaiI YATR 4 cut(s) 327, 350, 695, 731
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FatI CATG 2 cut(s) 325, 693
FauI CCCGC 3 cut(s) 94, 94, 114
Fnu4HI GCNGC 4 cut(s) 6, 33, 332, 409
FokI GGATG 4 cut(s) 143, 172, 562, 724
FriOI GRGCYC 3 cut(s) 98, 107, 423
Fsp4HI GCNGC 4 cut(s) 6, 33, 332, 409
GlaI GCGC 2 cut(s) 412, 562
GluI GCNGC 4 cut(s) 6, 33, 332, 409
GsuI CTGGAG 2 cut(s) 199, 573
HaeII RGCGCY 1 cut(s) 564
HaeIII GGCC 7 cut(s) 96, 105, 141, 225, 392, 399, 515
HapII CCGG 3 cut(s) 92, 120, 273
HgaI GACGC 1 cut(s) 630
HhaI GCGC 2 cut(s) 413, 563
Hin1I GRCGYC 1 cut(s) 561
Hin1II CATG 2 cut(s) 329, 697
Hin6I GCGC 2 cut(s) 411, 561
HinP1I GCGC 2 cut(s) 411, 561
HpaII CCGG 3 cut(s) 92, 120, 273
HphI GGTGA 3 cut(s) 49, 109, 639
Hpy166II GTNNAC 2 cut(s) 520, 529
Hpy188I TCNGA 1 cut(s) 661
Hpy188III TCNNGA 4 cut(s) 128, 259, 438, 609
Hpy8I GTNNAC 2 cut(s) 520, 529
Hpy99I CGWCG 1 cut(s) 646
HpyAV CCTTC 2 cut(s) 46, 163
HpyCH4III ACNGT 4 cut(s) 232, 367, 504, 540
HpyCH4V TGCA 3 cut(s) 32, 491, 575
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 102, 405
HpyF3I CTNAG 3 cut(s) 387, 494, 594
Hsp92I GRCGYC 1 cut(s) 561
Hsp92II CATG 2 cut(s) 329, 697
HspAI GCGC 2 cut(s) 411, 561
KasI GGCGCC 1 cut(s) 560
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Kzo9I GATC 1 cut(s) 480
LmnI GCTCC 2 cut(s) 218, 586
Lsp1109I GCAGC 3 cut(s) 17, 44, 318
LweI GCATC 2 cut(s) 194, 584
MaeIII GTNAC 1 cut(s) 645
MalI GATC 1 cut(s) 482
MbiI CCGCTC 2 cut(s) 109, 581
MboI GATC 1 cut(s) 480
MboII GAAGA 1 cut(s) 46
MhlI GDGCHC 3 cut(s) 98, 107, 423
MluCI AATT 2 cut(s) 192, 655
Mly113I GGCGCC 1 cut(s) 561
MroNI GCCGGC 1 cut(s) 272
MseI TTAA 4 cut(s) 362, 450, 675, 745
MspI CCGG 3 cut(s) 92, 120, 273
MspR9I CCNGG 2 cut(s) 92, 93
Mva1269I GAATGC 1 cut(s) 123
MvnI CGCG 1 cut(s) 413
MwoI GCNNNNNNNGC 3 cut(s) 80, 102, 405
NaeI GCCGGC 1 cut(s) 274
NarI GGCGCC 1 cut(s) 561
NciI CCSGG 2 cut(s) 92, 93
NdeII GATC 1 cut(s) 480
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 2 cut(s) 329, 697
NlaIV GGNNCC 4 cut(s) 96, 105, 562, 570
NmuCI GTSAC 1 cut(s) 645
PaqCI CACCTGC 1 cut(s) 580
PctI GAATGC 1 cut(s) 123
PdiI GCCGGC 1 cut(s) 274
Pfl23II CGTACG 1 cut(s) 414
PflFI GACNNNGTC 1 cut(s) 640
PkrI GCNGC 4 cut(s) 7, 34, 333, 410
PluTI GGCGCC 1 cut(s) 564
PspLI CGTACG 1 cut(s) 414
PspN4I GGNNCC 4 cut(s) 96, 105, 562, 570
PspOMI GGGCCC 2 cut(s) 94, 103
PspPI GGNCC 5 cut(s) 94, 95, 103, 104, 223
PsrI GAACNNNNNNTAC 2 cut(s) 128, 160
PstI CTGCAG 1 cut(s) 34
PsyI GACNNNGTC 1 cut(s) 640
RsaI GTAC 2 cut(s) 416, 537
RsaNI GTAC 2 cut(s) 415, 536
SaqAI TTAA 4 cut(s) 362, 450, 675, 745
SatI GCNGC 4 cut(s) 6, 33, 332, 409
Sau3AI GATC 1 cut(s) 480
Sau96I GGNCC 5 cut(s) 94, 95, 103, 104, 223
ScaI AGTACT 1 cut(s) 537
ScrFI CCNGG 2 cut(s) 92, 93
SduI GDGCHC 3 cut(s) 98, 107, 423
SetI ASST 8 cut(s) 10, 155, 215, 574, 595, 617, 652, 667
SfaNI GCATC 2 cut(s) 194, 584
SfcI CTRYAG 1 cut(s) 30
SfiI GGCCNNNNNGGCC 1 cut(s) 102
SfoI GGCGCC 1 cut(s) 562
SmaI CCCGGG 1 cut(s) 93
Sse9I AATT 2 cut(s) 192, 655
SsiI CCGC 7 cut(s) 81, 87, 101, 107, 160, 408, 579
SspDI GGCGCC 1 cut(s) 560
SspI AATATT 1 cut(s) 341
StyD4I CCNGG 2 cut(s) 90, 91
StyI CCWWGG 1 cut(s) 564
TaaI ACNGT 4 cut(s) 232, 367, 504, 540
TaqI TCGA 2 cut(s) 458, 671
TasI AATT 2 cut(s) 192, 655
TatI WGTACW 1 cut(s) 535
TauI GCSGC 1 cut(s) 411
Tru1I TTAA 4 cut(s) 362, 450, 675, 745
Tru9I TTAA 4 cut(s) 362, 450, 675, 745
TscAI CASTG 1 cut(s) 34
TseFI GTSAC 1 cut(s) 645
TseI GCWGC 3 cut(s) 5, 32, 331
Tsp45I GTSAC 1 cut(s) 645
TspDTI ATGAA 3 cut(s) 145, 682, 718
TspMI CCCGGG 1 cut(s) 91
TspRI CASTG 1 cut(s) 34
Tth111I GACNNNGTC 1 cut(s) 640
XmaI CCCGGG 1 cut(s) 91
ZrmI AGTACT 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.