Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010644

Physical Location & Seq

Genomic Coordinates Forward (+)

21032236 .. 21033784

Gene Structure 1549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G247600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 882 bp

ATGGACAAGAAAAGATCATCATCATCATCATCATCATCATCAGTAGTGACATGGAAACCAGCTGCAGCAAATGGAAATGAACAGGCGCCCAAGAAGAACTTGTGGACGCCAGAGGAGGACTTGATTCTCAAAAAATATCTGGAAACTCATGGTGAAGGCAATTGGGCCACTGTGTCCCAGCGATCAGGTCTGATGAGGAGTGGAAAGAGCTGTAGGCTGAGATGGAAGAATTACCTGAGACCCAACATAAAACGTGGACACATGTCCCAAGAGGAGCAAGACCTCATTATCCGAATGCATAAGCTTCTTGGCAATCGATGGTCACTGATTGCTGGGAGGCTTCCTGGTCGAACGGATAATGAAGTGAAGAACTACTGGAATACCCATTTGAACAAGATGAGCTGCCCAGCTGCACCCAAAAGAAAAAGTAGCCATTTGAACAAGATCGTCACTAATAAGAAGAAAAAGAACAAAATCAGCAGCTGCACCACCACCACCACCTGTACTGATCGTACTGATGATGATCATGATCAAATTCAGAAGAAAGACGCCACTGACTTTGATCATGATCATGATCATCGCCAGGAACCAAACGGATCAAACCTTACTTCTAGTGCCAGCTGTTACTACTATGACATTAATGACATGGTAGAATCTCCAATATTCACATCGCACCACGACTGCCTGCAGTACCTGCCTACAAACTTGAACGCAACATTTCTGTTTGATCACGATTTCATTGCTGCCGACGCCGCCTCCTCTTCCTCCTATTTGGATTCTTTTCTTTTCTTTGAAGCATTTGGATCGTCGGCTGCTGCTACTGCGGCTGACATGGAATCAGTTTTGCCATTAGCGTGTGCTGATCATCATCTAGGTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010026 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090558 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

294

Amino Acids

33.06

Weight (kDa)

8.1

Isoelectric Point (pI)

66.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52600
fragaria_vesca	FvH4_1g02690 FvH4_1g02690 FvH4_1g02690
malus_domestica	MD02G1027500.v1.1 MD15G1168900.v1.1
prunus_persica	Prupe.7G247600_v2.0.a1
pyrus_communis	pycom02g02240 pycom15g15060
rosa_chinensis	RchiOBHm_Chr2g0087781
rosa_laevigata	RLG00000015898
rosa_multiflora	Rmu_co8499051.1_g000001 Rmu_sc0021871.1_g000004
rosa_roxburghii	Rroxscaffold_2G00153240
rosa_rugosa	Rorug01G0478700
rosa_samantha	Rh2AG033000 Rh2BG032100 Rh2CG032800 Rh2DG032600
rosa_wichuraiana	Rw2G002570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	702
AccB1I	GGYRCC	1 cut(s)	85
AciI	CCGC	2 cut(s)	753, 824
AclWI	GGATC	2 cut(s)	604, 811
AcsI	RAATTY	1 cut(s)	534
AcyI	GRCGYC	4 cut(s)	86, 107, 549, 750
AfaI	GTAC	3 cut(s)	505, 514, 692
AflIII	ACRYGT	1 cut(s)	261
AgsI	TTSAA	4 cut(s)	391, 439, 709, 794
AjnI	CCWGG	2 cut(s)	343, 582
AluBI	AGCT	7 cut(s)	62, 210, 304, 402, 410, 483, 621
AluI	AGCT	7 cut(s)	62, 210, 304, 402, 410, 483, 621
Alw26I	GTCTC	1 cut(s)	232
AlwI	GGATC	2 cut(s)	604, 811
AlwNI	CAGNNNCTG	2 cut(s)	483, 694
AoxI	GGCC	1 cut(s)	165
ApeKI	GCWGC	9 cut(s)	62, 65, 402, 410, 480, 483, 743, 812, 815
ApoI	RAATTY	1 cut(s)	534
AseI	ATTAAT	1 cut(s)	639
AspLEI	GCGC	1 cut(s)	88
AspS9I	GGNCC	1 cut(s)	165
AsuHPI	GGTGA	1 cut(s)	164
BanI	GGYRCC	1 cut(s)	85
BbvI	GCAGC	9 cut(s)	49, 77, 389, 397, 470, 492, 730, 799, 802
BccI	CCATC	2 cut(s)	216, 312
BcgI	CGANNNNNNTGC	4 cut(s)	722, 756, 786, 820
BciT130I	CCWGG	2 cut(s)	345, 584
BclI	TGATCA	7 cut(s)	523, 529, 562, 568, 574, 727, 862
BcoDI	GTCTC	1 cut(s)	232
BfaI	CTAG	2 cut(s)	612, 872
BfmI	CTRYAG	3 cut(s)	63, 211, 686
BfoI	RGCGCY	1 cut(s)	89
BfuAI	ACCTGC	1 cut(s)	702
Bme1390I	CCNGG	2 cut(s)	345, 584
BmgT120I	GGNCC	1 cut(s)	165
BmiI	GGNNCC	2 cut(s)	87, 588
BmrFI	CCNGG	2 cut(s)	345, 584
BoxI	GACNNNNGTC	1 cut(s)	262
Bsa29I	ATCGAT	1 cut(s)	316
BsaBI	GATNNNNATC	6 cut(s)	19, 522, 528, 567, 573, 867
BsaHI	GRCGYC	4 cut(s)	86, 107, 549, 750
BsaI	GGTCTC	1 cut(s)	232
BsaXI	ACNNNNNCTCC	2 cut(s)	740, 770
Bse1I	ACTGG	1 cut(s)	380
Bse3DI	GCAATG	1 cut(s)	738
Bse8I	GATNNNNATC	6 cut(s)	19, 522, 528, 567, 573, 867
BseBI	CCWGG	2 cut(s)	345, 584
BseCI	ATCGAT	1 cut(s)	316
BseJI	GATNNNNATC	6 cut(s)	19, 522, 528, 567, 573, 867
BseMI	GCAATG	1 cut(s)	738
BseMII	CTCAG	2 cut(s)	209, 227
BseNI	ACTGG	1 cut(s)	380
BseRI	GAGGAG	4 cut(s)	128, 211, 287, 748
BseXI	GCAGC	9 cut(s)	49, 77, 389, 397, 470, 492, 730, 799, 802
BseYI	CCCAGC	3 cut(s)	177, 332, 406
BsgI	GTGCAG	2 cut(s)	396, 469
BshFI	GGCC	1 cut(s)	167
BshNI	GGYRCC	1 cut(s)	85
BshVI	ATCGAT	1 cut(s)	316
BslFI	GGGAC	2 cut(s)	160, 250
BsmAI	GTCTC	1 cut(s)	232
BsmFI	GGGAC	2 cut(s)	160, 250
BsmI	GAATGC	1 cut(s)	300
BsnI	GGCC	1 cut(s)	167
Bso31I	GGTCTC	1 cut(s)	232
BspACI	CCGC	2 cut(s)	753, 824
BspANI	GGCC	1 cut(s)	167
BspCNI	CTCAG	2 cut(s)	210, 228
BspDI	ATCGAT	1 cut(s)	316
BspHI	TCATGA	3 cut(s)	526, 565, 571
BspLI	GGNNCC	2 cut(s)	87, 588
BspMAI	CTGCAG	2 cut(s)	67, 690
BspMI	ACCTGC	1 cut(s)	702
BspPI	GGATC	2 cut(s)	604, 811
BspT107I	GGYRCC	1 cut(s)	85
BspTNI	GGTCTC	1 cut(s)	232
BsrDI	GCAATG	1 cut(s)	738
BsrI	ACTGG	1 cut(s)	380
BssNI	GRCGYC	4 cut(s)	86, 107, 549, 750
Bst2UI	CCWGG	2 cut(s)	345, 584
Bst4CI	ACNGT	1 cut(s)	172
Bst6I	CTCTTC	1 cut(s)	766
BstACI	GRCGYC	4 cut(s)	86, 107, 549, 750
BstAPI	GCANNNNNTGC	1 cut(s)	694
BstC8I	GCNNGC	2 cut(s)	619, 686
BstDEI	CTNAG	2 cut(s)	218, 236
BstH2I	RGCGCY	1 cut(s)	89
BstHHI	GCGC	1 cut(s)	88
BstMAI	GTCTC	1 cut(s)	232
BstMWI	GCNNNNNNNGC	5 cut(s)	694, 749, 752, 821, 824
BstNI	CCWGG	2 cut(s)	345, 584
BstNSI	RCATGY	1 cut(s)	265
BstPAI	GACNNNNGTC	1 cut(s)	262
BstSCI	CCNGG	2 cut(s)	343, 582
BstSFI	CTRYAG	3 cut(s)	63, 211, 686
BstV1I	GCAGC	9 cut(s)	49, 77, 389, 397, 470, 492, 730, 799, 802
Bsu15I	ATCGAT	1 cut(s)	316
BsuRI	GGCC	1 cut(s)	167
BsuTUI	ATCGAT	1 cut(s)	316
BtgZI	GCGATG	2 cut(s)	563, 654
BtsIMutI	CAGTG	3 cut(s)	168, 323, 552
BveI	ACCTGC	1 cut(s)	702
Cac8I	GCNNGC	2 cut(s)	619, 686
CaiI	CAGNNNCTG	2 cut(s)	483, 694
CciI	TCATGA	3 cut(s)	526, 565, 571
CfoI	GCGC	1 cut(s)	88
Cfr13I	GGNCC	1 cut(s)	165
ClaI	ATCGAT	1 cut(s)	316
CseI	GACGC	3 cut(s)	115, 557, 758
Csp6I	GTAC	3 cut(s)	504, 513, 691
CspCI	CAANNNNNGTGG	2 cut(s)	541, 576
CviAII	CATG	8 cut(s)	51, 149, 262, 527, 566, 572, 646, 832
CviQI	GTAC	3 cut(s)	504, 513, 691
DdeI	CTNAG	2 cut(s)	218, 236
DinI	GGCGCC	1 cut(s)	87
Eam1104I	CTCTTC	1 cut(s)	766
EarI	CTCTTC	1 cut(s)	766
Eco31I	GGTCTC	1 cut(s)	232
EcoRII	CCWGG	2 cut(s)	343, 582
EcoT22I	ATGCAT	1 cut(s)	300
EgeI	GGCGCC	1 cut(s)	87
EheI	GGCGCC	1 cut(s)	87
FaeI	CATG	8 cut(s)	54, 152, 265, 530, 569, 575, 649, 835
FalI	AAGNNNNNCTT	2 cut(s)	83, 115
FaqI	GGGAC	2 cut(s)	160, 250
FatI	CATG	8 cut(s)	50, 148, 261, 526, 565, 571, 645, 831
FbaI	TGATCA	7 cut(s)	523, 529, 562, 568, 574, 727, 862
FspBI	CTAG	2 cut(s)	612, 872
GlaI	GCGC	1 cut(s)	87
GsaI	CCCAGC	3 cut(s)	181, 336, 410
HaeII	RGCGCY	1 cut(s)	89
HaeIII	GGCC	1 cut(s)	167
HgaI	GACGC	3 cut(s)	115, 557, 758
HhaI	GCGC	1 cut(s)	88
Hin1I	GRCGYC	4 cut(s)	86, 107, 549, 750
Hin1II	CATG	8 cut(s)	54, 152, 265, 530, 569, 575, 649, 835
Hin6I	GCGC	1 cut(s)	86
HinP1I	GCGC	1 cut(s)	86
HindIII	AAGCTT	1 cut(s)	302
HinfI	GANTC	4 cut(s)	124, 653, 776, 836
HphI	GGTGA	1 cut(s)	164
Hpy166II	GTNNAC	2 cut(s)	105, 257
Hpy188I	TCNGA	3 cut(s)	192, 293, 540
Hpy188III	TCNNGA	5 cut(s)	140, 527, 566, 572, 731
Hpy8I	GTNNAC	2 cut(s)	105, 257
Hpy99I	CGWCG	2 cut(s)	752, 811
HpyAV	CCTTC	1 cut(s)	149
HpyCH4III	ACNGT	1 cut(s)	172
HpyCH4IV	ACGT	1 cut(s)	253
HpyCH4V	TGCA	5 cut(s)	65, 298, 413, 486, 688
HpyF10VI	GCNNNNNNNGC	5 cut(s)	694, 749, 752, 821, 824
HpyF3I	CTNAG	2 cut(s)	218, 236
HpySE526I	ACGT	1 cut(s)	253
Hsp92I	GRCGYC	4 cut(s)	86, 107, 549, 750
Hsp92II	CATG	8 cut(s)	54, 152, 265, 530, 569, 575, 649, 835
HspAI	GCGC	1 cut(s)	86
KasI	GGCGCC	1 cut(s)	85
Ksp22I	TGATCA	7 cut(s)	523, 529, 562, 568, 574, 727, 862
LmnI	GCTCC	1 cut(s)	274
Lsp1109I	GCAGC	9 cut(s)	49, 77, 389, 397, 470, 492, 730, 799, 802
MaeI	CTAG	2 cut(s)	612, 872
MaeII	ACGT	1 cut(s)	253
MaeIII	GTNAC	4 cut(s)	46, 321, 448, 623
MboII	GAAGA	6 cut(s)	106, 238, 379, 472, 553, 753
MfeI	CAATTG	1 cut(s)	160
MluCI	AATT	3 cut(s)	160, 229, 534
Mly113I	GGCGCC	1 cut(s)	86
MnlI	CCTC	9 cut(s)	106, 109, 189, 265, 293, 330, 766, 769, 775
Mph1103I	ATGCAT	1 cut(s)	300
MseI	TTAA	1 cut(s)	639
MslI	CAYNNNNRTG	2 cut(s)	570, 853
MspA1I	CMGCKG	4 cut(s)	62, 410, 483, 621
MspR9I	CCNGG	2 cut(s)	345, 584
MunI	CAATTG	1 cut(s)	160
Mva1269I	GAATGC	1 cut(s)	300
MvaI	CCWGG	2 cut(s)	345, 584
MwoI	GCNNNNNNNGC	5 cut(s)	694, 749, 752, 821, 824
NarI	GGCGCC	1 cut(s)	86
NlaIII	CATG	8 cut(s)	54, 152, 265, 530, 569, 575, 649, 835
NlaIV	GGNNCC	2 cut(s)	87, 588
NmuCI	GTSAC	3 cut(s)	46, 321, 448
NsiI	ATGCAT	1 cut(s)	300
NspI	RCATGY	1 cut(s)	265
PagI	TCATGA	3 cut(s)	526, 565, 571
PciI	ACATGT	1 cut(s)	261
PctI	GAATGC	1 cut(s)	300
PfeI	GAWTC	4 cut(s)	124, 653, 776, 836
PluTI	GGCGCC	1 cut(s)	89
PscI	ACATGT	1 cut(s)	261
PshAI	GACNNNNGTC	1 cut(s)	262
PshBI	ATTAAT	1 cut(s)	639
Psp6I	CCWGG	2 cut(s)	343, 582
PspFI	CCCAGC	3 cut(s)	177, 332, 406
PspGI	CCWGG	2 cut(s)	343, 582
PspN4I	GGNNCC	2 cut(s)	87, 588
PspPI	GGNCC	1 cut(s)	165
PstI	CTGCAG	2 cut(s)	67, 690
PstNI	CAGNNNCTG	2 cut(s)	483, 694
PvuII	CAGCTG	4 cut(s)	62, 410, 483, 621
RsaI	GTAC	3 cut(s)	505, 514, 692
RsaNI	GTAC	3 cut(s)	504, 513, 691
RseI	CAYNNNNRTG	2 cut(s)	570, 853
SaqAI	TTAA	1 cut(s)	639
Sau96I	GGNCC	1 cut(s)	165
ScrFI	CCNGG	2 cut(s)	345, 584
SfcI	CTRYAG	3 cut(s)	63, 211, 686
SfoI	GGCGCC	1 cut(s)	87
SmiMI	CAYNNNNRTG	2 cut(s)	570, 853
Sse9I	AATT	3 cut(s)	160, 229, 534
SsiI	CCGC	2 cut(s)	753, 824
SspDI	GGCGCC	1 cut(s)	85
SspI	AATATT	1 cut(s)	663
SspMI	CTAG	2 cut(s)	612, 872
StyD4I	CCNGG	2 cut(s)	343, 582
TaaI	ACNGT	1 cut(s)	172
TaiI	ACGT	1 cut(s)	256
TaqI	TCGA	2 cut(s)	316, 349
TasI	AATT	3 cut(s)	160, 229, 534
TatI	WGTACW	1 cut(s)	503
TauI	GCSGC	2 cut(s)	755, 827
TfiI	GAWTC	4 cut(s)	124, 653, 776, 836
Tru1I	TTAA	1 cut(s)	639
Tru9I	TTAA	1 cut(s)	639
TscAI	CASTG	3 cut(s)	175, 330, 559
TseFI	GTSAC	3 cut(s)	46, 321, 448
TseI	GCWGC	9 cut(s)	62, 65, 402, 410, 480, 483, 743, 812, 815
Tsp45I	GTSAC	3 cut(s)	46, 321, 448
TspDTI	ATGAA	3 cut(s)	93, 375, 727
TspGWI	ACGGA	2 cut(s)	368, 609
TspRI	CASTG	3 cut(s)	175, 330, 559
VspI	ATTAAT	1 cut(s)	639
XapI	RAATTY	1 cut(s)	534
XceI	RCATGY	1 cut(s)	265
XspI	CTAG	2 cut(s)	612, 872
Zsp2I	ATGCAT	1 cut(s)	300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.