Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007337

Physical Location & Seq

Genomic Coordinates Forward (+)

21258592 .. 21261444

Gene Structure 2853 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G251500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 528 bp

ATGGTTTATCACTCTAGTTTTGTGGACGAGGAAGGAATTACTAAAGCTTGTGGGTGCCCTCTTTTGCCTTTGAAAAGCCATATAAAGGGTCCTGCTCCAGTTTCAGACCAAGATAGGACTGATATTGTTGATGAAGCAATTACATTCTTCCGCGCTAATGTTTTCTTTAGAAACTTTGATGTTAAGAGCTCGGCCGATAAGCTGCTCATTTATCTGACATTCTACATTAATGTGGCTTTGAAGAGACTTGAGGGTTGTAGAACTTTGGCTGAAGGAACCAAGGCCATTATTAATTTGGGCCTGGAAAAAGTTCCTGTGCCTGGAGAGCCAAGTTTCCCTTTCCCAGGCCTGTTTCCTCTTCCTCAATCCCCGCAGGAGGCAGAATTGCTGAGGAATTATTTGAAGCAGATAAGGGAGGAAGCAAGCGGGAGATTATTAAGTGTTGCTTATAGACCTAACGGGACGCCTAATAAGTGGTGGCTGGCATTTGCCAAAAGGAAATTTATGAACATCATTCTTCCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005884 GO:0005885 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009987 GO:0010638 GO:0015629 GO:0016043 GO:0030027 GO:0030029 GO:0030036 GO:0030424 GO:0030426 GO:0030427 GO:0030832 GO:0030833 GO:0030838 GO:0031252 GO:0031334 GO:0031941 GO:0032271 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0033267 GO:0034314 GO:0042995 GO:0043005 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044463 GO:0044464 GO:0045010 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0061850 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090723 GO:0090725 GO:0097435 GO:0097458 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:0120025 GO:0120038 GO:0150034 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 ko04144 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 map00563 map01100 map04144 map04666 map04810 map05100 map05130 map05131 map05132

Pfam Domains

Protein Families

P21-Arc

Protein Analysis

176

Amino Acids

19.69

Weight (kDa)

8.99

Isoelectric Point (pI)

55.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60430 AT1G60430 AT1G60430 AT1G60430
fragaria_vesca	FvH4_3g33280 FvH4_3g33280 FvH4_3g33280
malus_domestica	MD02G1020300.v1.1 MD10G1159100.v1.1 MD15G1163100.v1.1
prunus_persica	Prupe.7G251500_v2.0.a1 Prupe.7G251500_v2.0.a1
pyrus_communis	pycom02g01780
rosa_chinensis	RchiOBHm_Chr5g0060671
rosa_laevigata	RLG00000035397
rosa_multiflora	Rmu_sc0000864.1_g000009
rosa_roxburghii	Rroxscaffold_1G00020120
rosa_rugosa	Rorug05G0332400 Rorug05G0332500 Rorug05G0332600
rosa_samantha	Rh5AG396100 Rh5BG408200 Rh5CG432800 Rh5DG423100
rosa_wichuraiana	Rw5G037310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	54
AccII	CGCG	1 cut(s)	153
AciI	CCGC	3 cut(s)	151, 371, 426
AcoI	YGGCCR	1 cut(s)	192
AcsI	RAATTY	1 cut(s)	500
AcuI	CTGAAG	1 cut(s)	291
AcyI	GRCGYC	1 cut(s)	464
AfiI	CCNNNNNNNGG	4 cut(s)	85, 320, 344, 376
AgsI	TTSAA	3 cut(s)	73, 241, 403
AjnI	CCWGG	3 cut(s)	300, 319, 343
AluBI	AGCT	3 cut(s)	47, 189, 202
AluI	AGCT	3 cut(s)	47, 189, 202
Alw21I	GWGCWC	1 cut(s)	191
Alw26I	GTCTC	1 cut(s)	238
AoxI	GGCC	4 cut(s)	192, 282, 298, 346
ApeKI	GCWGC	1 cut(s)	202
ApoI	RAATTY	1 cut(s)	500
AseI	ATTAAT	2 cut(s)	228, 291
Asp700I	GAANNNNTTC	1 cut(s)	309
AspLEI	GCGC	1 cut(s)	155
AspS9I	GGNCC	2 cut(s)	89, 298
AvaII	GGWCC	1 cut(s)	89
BaeGI	GKGCMC	1 cut(s)	59
BanI	GGYRCC	1 cut(s)	54
BanII	GRGCYC	1 cut(s)	191
Bbv12I	GWGCWC	1 cut(s)	191
BbvCI	CCTCAGC	1 cut(s)	389
BbvI	GCAGC	1 cut(s)	189
BciT130I	CCWGG	3 cut(s)	302, 321, 345
BcoDI	GTCTC	1 cut(s)	238
BfaI	CTAG	1 cut(s)	15
BisI	GCNGC	1 cut(s)	203
BlsI	GCNGC	1 cut(s)	204
Bme1390I	CCNGG	3 cut(s)	302, 321, 345
Bme18I	GGWCC	1 cut(s)	89
BmgT120I	GGNCC	2 cut(s)	89, 298
BmiI	GGNNCC	3 cut(s)	56, 90, 277
BmrFI	CCNGG	3 cut(s)	302, 321, 345
BpmI	CTGGAG	2 cut(s)	81, 342
Bpu10I	CCTNAGC	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	269
BsaHI	GRCGYC	1 cut(s)	464
BsaJI	CCNNGG	2 cut(s)	279, 343
Bsc4I	CCNNNNNNNGG	4 cut(s)	85, 320, 344, 376
Bse1I	ACTGG	1 cut(s)	98
BseBI	CCWGG	3 cut(s)	302, 321, 345
BseDI	CCNNGG	2 cut(s)	279, 343
BseLI	CCNNNNNNNGG	4 cut(s)	85, 320, 344, 376
BseMII	CTCAG	1 cut(s)	380
BseNI	ACTGG	1 cut(s)	98
BseSI	GKGCMC	1 cut(s)	59
BseX3I	CGGCCG	1 cut(s)	192
BseXI	GCAGC	1 cut(s)	189
Bsh1236I	CGCG	1 cut(s)	153
Bsh1285I	CGRYCG	1 cut(s)	195
BshFI	GGCC	4 cut(s)	194, 284, 300, 348
BshNI	GGYRCC	1 cut(s)	54
BsiEI	CGRYCG	1 cut(s)	195
BsiHKAI	GWGCWC	1 cut(s)	191
BslFI	GGGAC	1 cut(s)	475
BslI	CCNNNNNNNGG	4 cut(s)	85, 320, 344, 376
BsmAI	GTCTC	1 cut(s)	238
BsmFI	GGGAC	1 cut(s)	475
BsnI	GGCC	4 cut(s)	194, 284, 300, 348
Bsp1286I	GDGCHC	2 cut(s)	59, 191
BspACI	CCGC	3 cut(s)	151, 371, 426
BspANI	GGCC	4 cut(s)	194, 284, 300, 348
BspCNI	CTCAG	1 cut(s)	381
BspFNI	CGCG	1 cut(s)	153
BspHI	TCATGA	1 cut(s)	524
BspLI	GGNNCC	3 cut(s)	56, 90, 277
BspT107I	GGYRCC	1 cut(s)	54
BsrI	ACTGG	1 cut(s)	98
BssECI	CCNNGG	2 cut(s)	279, 343
BssNI	GRCGYC	1 cut(s)	464
BssT1I	CCWWGG	1 cut(s)	279
Bst2UI	CCWGG	3 cut(s)	302, 321, 345
Bst6I	CTCTTC	2 cut(s)	236, 363
BstACI	GRCGYC	1 cut(s)	464
BstC8I	GCNNGC	2 cut(s)	424, 483
BstDEI	CTNAG	1 cut(s)	389
BstENI	CCTNNNNNAGG	1 cut(s)	342
BstFNI	CGCG	1 cut(s)	153
BstHHI	GCGC	1 cut(s)	155
BstMAI	GTCTC	1 cut(s)	238
BstMCI	CGRYCG	1 cut(s)	195
BstMWI	GCNNNNNNNGC	1 cut(s)	325
BstNI	CCWGG	3 cut(s)	302, 321, 345
BstSCI	CCNGG	3 cut(s)	300, 319, 343
BstSLI	GKGCMC	1 cut(s)	59
BstUI	CGCG	1 cut(s)	153
BstV1I	GCAGC	1 cut(s)	189
BstZI	CGGCCG	1 cut(s)	192
BsuRI	GGCC	4 cut(s)	194, 284, 300, 348
Cac8I	GCNNGC	2 cut(s)	424, 483
CciI	TCATGA	1 cut(s)	524
CfoI	GCGC	1 cut(s)	155
Cfr13I	GGNCC	2 cut(s)	89, 298
CseI	GACGC	1 cut(s)	472
CviAII	CATG	1 cut(s)	525
DdeI	CTNAG	1 cut(s)	389
EaeI	YGGCCR	1 cut(s)	192
EagI	CGGCCG	1 cut(s)	192
Eam1104I	CTCTTC	2 cut(s)	236, 363
EarI	CTCTTC	2 cut(s)	236, 363
Ecl136II	GAGCTC	1 cut(s)	189
EclXI	CGGCCG	1 cut(s)	192
Eco130I	CCWWGG	1 cut(s)	279
Eco147I	AGGCCT	1 cut(s)	348
Eco24I	GRGCYC	1 cut(s)	191
Eco47I	GGWCC	1 cut(s)	89
Eco52I	CGGCCG	1 cut(s)	192
Eco53kI	GAGCTC	1 cut(s)	189
Eco57I	CTGAAG	1 cut(s)	291
EcoICRI	GAGCTC	1 cut(s)	189
EcoNI	CCTNNNNNAGG	1 cut(s)	342
EcoO109I	RGGNCCY	1 cut(s)	89
EcoRII	CCWGG	3 cut(s)	300, 319, 343
EcoT14I	CCWWGG	1 cut(s)	279
EcoT38I	GRGCYC	1 cut(s)	191
ErhI	CCWWGG	1 cut(s)	279
FaeI	CATG	1 cut(s)	528
FaiI	YATR	5 cut(s)	81, 83, 450, 506, 526
FalI	AAGNNNNNCTT	4 cut(s)	322, 354, 430, 462
FaqI	GGGAC	1 cut(s)	475
FatI	CATG	1 cut(s)	524
FauI	CCCGC	2 cut(s)	378, 419
Fnu4HI	GCNGC	1 cut(s)	203
FriOI	GRGCYC	1 cut(s)	191
Fsp4HI	GCNGC	1 cut(s)	203
FspBI	CTAG	1 cut(s)	15
GlaI	GCGC	1 cut(s)	154
GluI	GCNGC	1 cut(s)	203
GsuI	CTGGAG	2 cut(s)	81, 342
HaeIII	GGCC	4 cut(s)	194, 284, 300, 348
HgaI	GACGC	1 cut(s)	472
HhaI	GCGC	1 cut(s)	155
Hin1I	GRCGYC	1 cut(s)	464
Hin1II	CATG	1 cut(s)	528
Hin6I	GCGC	1 cut(s)	153
HinP1I	GCGC	1 cut(s)	153
HindIII	AAGCTT	1 cut(s)	45
Hpy166II	GTNNAC	1 cut(s)	25
Hpy188I	TCNGA	2 cut(s)	106, 216
Hpy188III	TCNNGA	1 cut(s)	525
Hpy8I	GTNNAC	1 cut(s)	25
HpyAV	CCTTC	2 cut(s)	26, 266
HpyF10VI	GCNNNNNNNGC	1 cut(s)	325
HpyF3I	CTNAG	1 cut(s)	389
Hsp92I	GRCGYC	1 cut(s)	464
Hsp92II	CATG	1 cut(s)	528
HspAI	GCGC	1 cut(s)	153
LmnI	GCTCC	1 cut(s)	100
Lsp1109I	GCAGC	1 cut(s)	189
MaeI	CTAG	1 cut(s)	15
MboII	GAAGA	4 cut(s)	139, 253, 350, 509
MhlI	GDGCHC	2 cut(s)	59, 191
MluCI	AATT	6 cut(s)	36, 138, 292, 383, 394, 500
MnlI	CCTC	8 cut(s)	22, 69, 244, 366, 370, 372, 384, 409
MroXI	GAANNNNTTC	1 cut(s)	309
MseI	TTAA	4 cut(s)	183, 228, 291, 437
MslI	CAYNNNNRTG	1 cut(s)	230
MspR9I	CCNGG	3 cut(s)	302, 321, 345
MvaI	CCWGG	3 cut(s)	302, 321, 345
MvnI	CGCG	1 cut(s)	153
MwoI	GCNNNNNNNGC	1 cut(s)	325
NlaIII	CATG	1 cut(s)	528
NlaIV	GGNNCC	3 cut(s)	56, 90, 277
NmeAIII	GCCGAG	1 cut(s)	170
PagI	TCATGA	1 cut(s)	524
PceI	AGGCCT	1 cut(s)	348
PdmI	GAANNNNTTC	1 cut(s)	309
PkrI	GCNGC	1 cut(s)	204
PpuMI	RGGWCCY	1 cut(s)	89
PshBI	ATTAAT	2 cut(s)	228, 291
Psp124BI	GAGCTC	1 cut(s)	191
Psp5II	RGGWCCY	1 cut(s)	89
Psp6I	CCWGG	3 cut(s)	300, 319, 343
PspGI	CCWGG	3 cut(s)	300, 319, 343
PspN4I	GGNNCC	3 cut(s)	56, 90, 277
PspPI	GGNCC	2 cut(s)	89, 298
PspPPI	RGGWCCY	1 cut(s)	89
RseI	CAYNNNNRTG	1 cut(s)	230
SacI	GAGCTC	1 cut(s)	191
SaqAI	TTAA	4 cut(s)	183, 228, 291, 437
SatI	GCNGC	1 cut(s)	203
Sau96I	GGNCC	2 cut(s)	89, 298
ScrFI	CCNGG	3 cut(s)	302, 321, 345
SduI	GDGCHC	2 cut(s)	59, 191
SetI	ASST	4 cut(s)	49, 191, 204, 457
SinI	GGWCC	1 cut(s)	89
SmiMI	CAYNNNNRTG	1 cut(s)	230
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	6 cut(s)	36, 138, 292, 383, 394, 500
SseBI	AGGCCT	1 cut(s)	348
SsiI	CCGC	3 cut(s)	151, 371, 426
SspMI	CTAG	1 cut(s)	15
SstI	GAGCTC	1 cut(s)	191
StuI	AGGCCT	1 cut(s)	348
StyD4I	CCNGG	3 cut(s)	300, 319, 343
StyI	CCWWGG	1 cut(s)	279
TasI	AATT	6 cut(s)	36, 138, 292, 383, 394, 500
Tru1I	TTAA	4 cut(s)	183, 228, 291, 437
Tru9I	TTAA	4 cut(s)	183, 228, 291, 437
TseI	GCWGC	1 cut(s)	202
TspDTI	ATGAA	2 cut(s)	147, 521
VpaK11BI	GGWCC	1 cut(s)	89
VspI	ATTAAT	2 cut(s)	228, 291
XagI	CCTNNNNNAGG	1 cut(s)	342
XapI	RAATTY	1 cut(s)	500
XcmI	CCANNNNNNNNNTGG	1 cut(s)	292
XmnI	GAANNNNTTC	1 cut(s)	309
XspI	CTAG	1 cut(s)	15

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.