Belongs to the helicase family. Dicer subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20320 AT5G20320 AT5G20320 |
| fragaria_vesca | FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 FvH4_1g01480 |
| malus_domestica | MD15G1157600.v1.1 |
| prunus_persica | Prupe.7G252800_v2.0.a1 Prupe.7G252800_v2.0.a1 Prupe.7G252800_v2.0.a1 Prupe.7G252800_v2.0.a1 Prupe.7G252800_v2.0.a1 Prupe.7G252800_v2.0.a1 |
| pyrus_communis | pycom15g14140 |
| rosa_chinensis | RchiOBHm_Chr2g0086421 |
| rosa_laevigata | RLG00000015757 |
| rosa_multiflora | Rmu_sc0005127.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00154590 |
| rosa_rugosa | Rorug01G0467200 |
| rosa_samantha | Rh2AG017900 Rh2BG017500 Rh2CG018300 Rh2DG019200 |
| rosa_wichuraiana | Rw2G001490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 779, 1680, 2466 |
| Acc36I | ACCTGC | 1 cut(s) | 3244 |
| AccB1I | GGYRCC | 3 cut(s) | 41, 1943, 2194 |
| AccI | GTMKAC | 3 cut(s) | 925, 3258, 3537 |
| AccII | CGCG | 1 cut(s) | 1522 |
| AccIII | TCCGGA | 1 cut(s) | 1712 |
| AciI | CCGC | 3 cut(s) | 212, 1522, 4653 |
| AclI | AACGTT | 1 cut(s) | 3196 |
| AclWI | GGATC | 8 cut(s) | 356, 2115, 2171, 2730, 3276, 4176, 4663, 4837 |
| AcuI | CTGAAG | 4 cut(s) | 113, 1186, 2175, 3011 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 51, 115, 211, 623, 3096, 3913, 4066 |
| AflII | CTTAAG | 1 cut(s) | 1948 |
| AjnI | CCWGG | 6 cut(s) | 311, 2530, 3075, 3799, 4598, 4648 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1772, 1804, 2777, 2809, 3450, 3482 |
| Alw21I | GWGCWC | 2 cut(s) | 91, 4681 |
| Alw26I | GTCTC | 6 cut(s) | 618, 742, 3329, 3999, 4403, 4589 |
| AlwI | GGATC | 8 cut(s) | 356, 2115, 2171, 2730, 3276, 4176, 4663, 4837 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1487, 2776, 3830 |
| Ama87I | CYCGRG | 2 cut(s) | 109, 1071 |
| Aor13HI | TCCGGA | 1 cut(s) | 1712 |
| AoxI | GGCC | 4 cut(s) | 235, 949, 3304, 3977 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4333, 4365 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 560, 1192, 4644 |
| AspLEI | GCGC | 2 cut(s) | 283, 1522 |
| AspS9I | GGNCC | 7 cut(s) | 106, 235, 770, 2840, 3870, 3977, 4748 |
| AsuC2I | CCSGG | 1 cut(s) | 3017 |
| AsuHPI | GGTGA | 9 cut(s) | 18, 1052, 1439, 3125, 3410, 3754, 4535, 4762, 4824 |
| AsuNHI | GCTAGC | 2 cut(s) | 1493, 3232 |
| AvaI | CYCGRG | 2 cut(s) | 109, 1071 |
| AvaII | GGWCC | 5 cut(s) | 106, 770, 2840, 3870, 4748 |
| BaeGI | GKGCMC | 1 cut(s) | 4882 |
| BanI | GGYRCC | 3 cut(s) | 41, 1943, 2194 |
| BanII | GRGCYC | 3 cut(s) | 91, 2530, 4681 |
| BauI | CACGAG | 2 cut(s) | 1509, 2043 |
| BbsI | GAAGAC | 3 cut(s) | 206, 869, 3959 |
| Bbv12I | GWGCWC | 2 cut(s) | 91, 4681 |
| BbvCI | CCTCAGC | 2 cut(s) | 2120, 3027 |
| BceAI | ACGGC | 3 cut(s) | 851, 3291, 3728 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1070, 1104, 3932, 3966 |
| BciT130I | CCWGG | 6 cut(s) | 313, 2532, 3077, 3801, 4600, 4650 |
| BclI | TGATCA | 2 cut(s) | 34, 3759 |
| BcnI | CCSGG | 1 cut(s) | 3017 |
| BcoDI | GTCTC | 6 cut(s) | 618, 742, 3329, 3999, 4403, 4589 |
| BfmI | CTRYAG | 1 cut(s) | 2683 |
| BfrI | CTTAAG | 1 cut(s) | 1948 |
| BfuAI | ACCTGC | 1 cut(s) | 3244 |
| BglII | AGATCT | 2 cut(s) | 1388, 2252 |
| BmcAI | AGTACT | 2 cut(s) | 1742, 1769 |
| Bme1390I | CCNGG | 7 cut(s) | 313, 2532, 3017, 3077, 3801, 4600, 4650 |
| Bme18I | GGWCC | 5 cut(s) | 106, 770, 2840, 3870, 4748 |
| BmeT110I | CYCGRG | 2 cut(s) | 109, 1071 |
| BmgT120I | GGNCC | 7 cut(s) | 106, 235, 770, 2840, 3870, 3977, 4748 |
| BmiI | GGNNCC | 8 cut(s) | 43, 108, 1152, 1816, 1945, 2196, 2529, 4716 |
| BmrFI | CCNGG | 7 cut(s) | 313, 2532, 3017, 3077, 3801, 4600, 4650 |
| BmrI | ACTGGG | 1 cut(s) | 2198 |
| BmtI | GCTAGC | 2 cut(s) | 1497, 3236 |
| BmuI | ACTGGG | 1 cut(s) | 2198 |
| BpiI | GAAGAC | 3 cut(s) | 206, 869, 3959 |
| BpmI | CTGGAG | 6 cut(s) | 105, 600, 1413, 2499, 2514, 4788 |
| Bpu10I | CCTNAGC | 5 cut(s) | 693, 2120, 2763, 2880, 3027 |
| BpuEI | CTTGAG | 9 cut(s) | 504, 842, 1147, 2327, 3110, 3122, 3342, 4308, 4912 |
| BpuMI | CCSGG | 1 cut(s) | 3017 |
| Bsa29I | ATCGAT | 1 cut(s) | 2219 |
| BsaAI | YACGTR | 1 cut(s) | 449 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1367, 2235, 3826 |
| BsaI | GGTCTC | 1 cut(s) | 4589 |
| BsaJI | CCNNGG | 4 cut(s) | 110, 312, 2090, 4599 |
| BsaWI | WCCGGW | 2 cut(s) | 1712, 2358 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 598, 628, 3015, 3045, 3462, 3492, 3729, 3759 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 51, 115, 211, 623, 3096, 3913, 4066 |
| Bse1I | ACTGG | 6 cut(s) | 193, 617, 792, 1738, 2204, 2516 |
| Bse3DI | GCAATG | 4 cut(s) | 1113, 3441, 3612, 4744 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1367, 2235, 3826 |
| BseAI | TCCGGA | 1 cut(s) | 1712 |
| BseBI | CCWGG | 6 cut(s) | 313, 2532, 3077, 3801, 4600, 4650 |
| BseCI | ATCGAT | 1 cut(s) | 2219 |
| BseDI | CCNNGG | 4 cut(s) | 110, 312, 2090, 4599 |
| BseJI | GATNNNNATC | 3 cut(s) | 1367, 2235, 3826 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 51, 115, 211, 623, 3096, 3913, 4066 |
| BseMI | GCAATG | 4 cut(s) | 1113, 3441, 3612, 4744 |
| BseMII | CTCAG | 9 cut(s) | 2134, 2256, 2367, 2715, 2754, 2871, 3018, 3030, 3302 |
| BseNI | ACTGG | 6 cut(s) | 193, 617, 792, 1738, 2204, 2516 |
| BseRI | GAGGAG | 5 cut(s) | 176, 1037, 2006, 3720, 4519 |
| BseSI | GKGCMC | 1 cut(s) | 4882 |
| BseYI | CCCAGC | 1 cut(s) | 4610 |
| BsgI | GTGCAG | 1 cut(s) | 2762 |
| Bsh1236I | CGCG | 1 cut(s) | 1522 |
| BshFI | GGCC | 4 cut(s) | 237, 951, 3306, 3979 |
| BshNI | GGYRCC | 3 cut(s) | 41, 1943, 2194 |
| BshVI | ATCGAT | 1 cut(s) | 2219 |
| BsiHKAI | GWGCWC | 2 cut(s) | 91, 4681 |
| BsiHKCI | CYCGRG | 2 cut(s) | 109, 1071 |
| BsiSI | CCGG | 3 cut(s) | 1713, 2359, 3017 |
| BslFI | GGGAC | 1 cut(s) | 199 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 51, 115, 211, 623, 3096, 3913, 4066 |
| BsmAI | GTCTC | 6 cut(s) | 618, 742, 3329, 3999, 4403, 4589 |
| BsmBI | CGTCTC | 1 cut(s) | 618 |
| BsmFI | GGGAC | 1 cut(s) | 199 |
| BsmI | GAATGC | 4 cut(s) | 918, 2683, 3473, 4736 |
| BsnI | GGCC | 4 cut(s) | 237, 951, 3306, 3979 |
| Bso31I | GGTCTC | 1 cut(s) | 4589 |
| BsoBI | CYCGRG | 2 cut(s) | 109, 1071 |
| Bsp1286I | GDGCHC | 4 cut(s) | 91, 2530, 4681, 4882 |
| Bsp13I | TCCGGA | 1 cut(s) | 1712 |
| Bsp1407I | TGTACA | 3 cut(s) | 759, 3679, 4462 |
| Bsp19I | CCATGG | 1 cut(s) | 2090 |
| BspACI | CCGC | 3 cut(s) | 212, 1522, 4653 |
| BspANI | GGCC | 4 cut(s) | 237, 951, 3306, 3979 |
| BspCNI | CTCAG | 9 cut(s) | 2133, 2257, 2368, 2714, 2755, 2872, 3019, 3031, 3301 |
| BspDI | ATCGAT | 1 cut(s) | 2219 |
| BspEI | TCCGGA | 1 cut(s) | 1712 |
| BspFNI | CGCG | 1 cut(s) | 1522 |
| BspHI | TCATGA | 1 cut(s) | 4098 |
| BspLI | GGNNCC | 8 cut(s) | 43, 108, 1152, 1816, 1945, 2196, 2529, 4716 |
| BspMI | ACCTGC | 1 cut(s) | 3244 |
| BspOI | GCTAGC | 2 cut(s) | 1497, 3236 |
| BspPI | GGATC | 8 cut(s) | 356, 2115, 2171, 2730, 3276, 4176, 4663, 4837 |
| BspT107I | GGYRCC | 3 cut(s) | 41, 1943, 2194 |
| BspTI | CTTAAG | 1 cut(s) | 1948 |
| BspTNI | GGTCTC | 1 cut(s) | 4589 |
| BsrDI | GCAATG | 4 cut(s) | 1113, 3441, 3612, 4744 |
| BsrGI | TGTACA | 3 cut(s) | 759, 3679, 4462 |
| BsrI | ACTGG | 6 cut(s) | 193, 617, 792, 1738, 2204, 2516 |
| BssECI | CCNNGG | 4 cut(s) | 110, 312, 2090, 4599 |
| BssNAI | GTATAC | 2 cut(s) | 926, 3259 |
| BssSI | CACGAG | 2 cut(s) | 1509, 2043 |
| BssT1I | CCWWGG | 1 cut(s) | 2090 |
| Bst1107I | GTATAC | 2 cut(s) | 926, 3259 |
| Bst2BI | CACGAG | 2 cut(s) | 1509, 2043 |
| Bst2UI | CCWGG | 6 cut(s) | 313, 2532, 3077, 3801, 4600, 4650 |
| Bst6I | CTCTTC | 3 cut(s) | 52, 745, 2014 |
| BstAFI | CTTAAG | 1 cut(s) | 1948 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2062, 2809, 4865 |
| BstAUI | TGTACA | 3 cut(s) | 759, 3679, 4462 |
| BstBAI | YACGTR | 1 cut(s) | 449 |
| BstDSI | CCRYGG | 1 cut(s) | 2090 |
| BstEII | GGTNACC | 1 cut(s) | 3416 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3911 |
| BstFNI | CGCG | 1 cut(s) | 1522 |
| BstHHI | GCGC | 2 cut(s) | 283, 1522 |
| BstMAI | GTCTC | 6 cut(s) | 618, 742, 3329, 3999, 4403, 4589 |
| BstNI | CCWGG | 6 cut(s) | 313, 2532, 3077, 3801, 4600, 4650 |
| BstNSI | RCATGY | 3 cut(s) | 1056, 2999, 4868 |
| BstPI | GGTNACC | 1 cut(s) | 3416 |
| BstSCI | CCNGG | 7 cut(s) | 311, 2530, 3015, 3075, 3799, 4598, 4648 |
| BstSFI | CTRYAG | 1 cut(s) | 2683 |
| BstSLI | GKGCMC | 1 cut(s) | 4882 |
| BstSNI | TACGTA | 1 cut(s) | 449 |
| BstUI | CGCG | 1 cut(s) | 1522 |
| BstV2I | GAAGAC | 3 cut(s) | 206, 869, 3959 |
| BstX2I | RGATCY | 5 cut(s) | 348, 1388, 2163, 2252, 4168 |
| BstYI | RGATCY | 5 cut(s) | 348, 1388, 2163, 2252, 4168 |
| BstZ17I | GTATAC | 2 cut(s) | 926, 3259 |
| Bsu15I | ATCGAT | 1 cut(s) | 2219 |
| BsuRI | GGCC | 4 cut(s) | 237, 951, 3306, 3979 |
| BsuTUI | ATCGAT | 1 cut(s) | 2219 |
| BtgI | CCRYGG | 1 cut(s) | 2090 |
| BtsI | GCAGTG | 2 cut(s) | 845, 4381 |
| BtsIMutI | CAGTG | 8 cut(s) | 294, 460, 845, 1564, 2655, 3493, 4227, 4381 |
| BveI | ACCTGC | 1 cut(s) | 3244 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1487, 2776, 3830 |
| CciI | TCATGA | 1 cut(s) | 4098 |
| CfoI | GCGC | 2 cut(s) | 283, 1522 |
| Cfr13I | GGNCC | 7 cut(s) | 106, 235, 770, 2840, 3870, 3977, 4748 |
| ClaI | ATCGAT | 1 cut(s) | 2219 |
| CseI | GACGC | 2 cut(s) | 17, 600 |
| DraI | TTTAAA | 2 cut(s) | 1146, 3496 |
| Eam1104I | CTCTTC | 3 cut(s) | 52, 745, 2014 |
| EarI | CTCTTC | 3 cut(s) | 52, 745, 2014 |
| EciI | GGCGGA | 1 cut(s) | 4668 |
| Ecl136II | GAGCTC | 2 cut(s) | 89, 4679 |
| Eco105I | TACGTA | 1 cut(s) | 449 |
| Eco130I | CCWWGG | 1 cut(s) | 2090 |
| Eco24I | GRGCYC | 3 cut(s) | 91, 2530, 4681 |
| Eco31I | GGTCTC | 1 cut(s) | 4589 |
| Eco32I | GATATC | 2 cut(s) | 1084, 2920 |
| Eco47I | GGWCC | 5 cut(s) | 106, 770, 2840, 3870, 4748 |
| Eco53kI | GAGCTC | 2 cut(s) | 89, 4679 |
| Eco57I | CTGAAG | 4 cut(s) | 113, 1186, 2175, 3011 |
| Eco88I | CYCGRG | 2 cut(s) | 109, 1071 |
| Eco91I | GGTNACC | 1 cut(s) | 3416 |
| EcoICRI | GAGCTC | 2 cut(s) | 89, 4679 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3911 |
| EcoO109I | RGGNCCY | 2 cut(s) | 106, 2840 |
| EcoO65I | GGTNACC | 1 cut(s) | 3416 |
| EcoRI | GAATTC | 1 cut(s) | 1188 |
| EcoRII | CCWGG | 6 cut(s) | 311, 2530, 3075, 3799, 4598, 4648 |
| EcoRV | GATATC | 2 cut(s) | 1084, 2920 |
| EcoT14I | CCWWGG | 1 cut(s) | 2090 |
| EcoT22I | ATGCAT | 6 cut(s) | 272, 918, 1229, 1546, 3572, 4503 |
| EcoT38I | GRGCYC | 3 cut(s) | 91, 2530, 4681 |
| ErhI | CCWWGG | 1 cut(s) | 2090 |
| Esp3I | CGTCTC | 1 cut(s) | 618 |
| FaqI | GGGAC | 1 cut(s) | 199 |
| FbaI | TGATCA | 2 cut(s) | 34, 3759 |
| FblI | GTMKAC | 3 cut(s) | 925, 3258, 3537 |
| FriOI | GRGCYC | 3 cut(s) | 91, 2530, 4681 |
| GlaI | GCGC | 2 cut(s) | 282, 1521 |
| GsaI | CCCAGC | 1 cut(s) | 4614 |
| GsuI | CTGGAG | 6 cut(s) | 105, 600, 1413, 2499, 2514, 4788 |
| HaeIII | GGCC | 4 cut(s) | 237, 951, 3306, 3979 |
| HapII | CCGG | 3 cut(s) | 1713, 2359, 3017 |
| HgaI | GACGC | 2 cut(s) | 17, 600 |
| HhaI | GCGC | 2 cut(s) | 283, 1522 |
| Hin6I | GCGC | 2 cut(s) | 281, 1520 |
| HinP1I | GCGC | 2 cut(s) | 281, 1520 |
| HincII | GTYRAC | 1 cut(s) | 3484 |
| HindII | GTYRAC | 1 cut(s) | 3484 |
| HindIII | AAGCTT | 4 cut(s) | 818, 1751, 2173, 2345 |
| HpaII | CCGG | 3 cut(s) | 1713, 2359, 3017 |
| HphI | GGTGA | 9 cut(s) | 18, 1052, 1439, 3125, 3410, 3754, 4535, 4762, 4824 |
| Hpy99I | CGWCG | 1 cut(s) | 11 |
| HpyCH4IV | ACGT | 3 cut(s) | 448, 1177, 3196 |
| HpySE526I | ACGT | 3 cut(s) | 448, 1177, 3196 |
| HspAI | GCGC | 2 cut(s) | 281, 1520 |
| Kpn2I | TCCGGA | 1 cut(s) | 1712 |
| Ksp22I | TGATCA | 2 cut(s) | 34, 3759 |
| MaeII | ACGT | 3 cut(s) | 448, 1177, 3196 |
| MfeI | CAATTG | 3 cut(s) | 134, 483, 3806 |
| MflI | RGATCY | 5 cut(s) | 348, 1388, 2163, 2252, 4168 |
| MhlI | GDGCHC | 4 cut(s) | 91, 2530, 4681, 4882 |
| MlyI | GAGTC | 8 cut(s) | 488, 649, 1063, 1335, 2000, 2693, 4022, 4520 |
| MmeI | TCCRAC | 1 cut(s) | 3118 |
| Mph1103I | ATGCAT | 6 cut(s) | 272, 918, 1229, 1546, 3572, 4503 |
| MroI | TCCGGA | 1 cut(s) | 1712 |
| MroXI | GAANNNNTTC | 3 cut(s) | 560, 1192, 4644 |
| MslI | CAYNNNNRTG | 2 cut(s) | 473, 540 |
| MspA1I | CMGCKG | 2 cut(s) | 1121, 4614 |
| MspCI | CTTAAG | 1 cut(s) | 1948 |
| MspI | CCGG | 3 cut(s) | 1713, 2359, 3017 |
| MspR9I | CCNGG | 7 cut(s) | 313, 2532, 3017, 3077, 3801, 4600, 4650 |
| MunI | CAATTG | 3 cut(s) | 134, 483, 3806 |
| Mva1269I | GAATGC | 4 cut(s) | 918, 2683, 3473, 4736 |
| MvaI | CCWGG | 6 cut(s) | 313, 2532, 3077, 3801, 4600, 4650 |
| MvnI | CGCG | 1 cut(s) | 1522 |
| NciI | CCSGG | 1 cut(s) | 3017 |
| NcoI | CCATGG | 1 cut(s) | 2090 |
| NheI | GCTAGC | 2 cut(s) | 1493, 3232 |
| NlaIV | GGNNCC | 8 cut(s) | 43, 108, 1152, 1816, 1945, 2196, 2529, 4716 |
| NmeAIII | GCCGAG | 1 cut(s) | 4336 |
| NmuCI | GTSAC | 5 cut(s) | 794, 1952, 2446, 3416, 4523 |
| NsiI | ATGCAT | 6 cut(s) | 272, 918, 1229, 1546, 3572, 4503 |
| NspI | RCATGY | 3 cut(s) | 1056, 2999, 4868 |
| PacI | TTAATTAA | 1 cut(s) | 2733 |
| PaeI | GCATGC | 1 cut(s) | 4868 |
| PagI | TCATGA | 1 cut(s) | 4098 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4404 |
| PctI | GAATGC | 4 cut(s) | 918, 2683, 3473, 4736 |
| PdmI | GAANNNNTTC | 3 cut(s) | 560, 1192, 4644 |
| PflFI | GACNNNGTC | 1 cut(s) | 610 |
| PfoI | TCCNGGA | 2 cut(s) | 2530, 3015 |
| PleI | GAGTC | 8 cut(s) | 487, 648, 1063, 1334, 2000, 2693, 4021, 4520 |
| PpsI | GAGTC | 8 cut(s) | 487, 648, 1063, 1334, 2000, 2693, 4021, 4520 |
| Ppu21I | YACGTR | 1 cut(s) | 449 |
| PpuMI | RGGWCCY | 2 cut(s) | 106, 2840 |
| PsiI | TTATAA | 3 cut(s) | 779, 1680, 2466 |
| Psp124BI | GAGCTC | 2 cut(s) | 91, 4681 |
| Psp1406I | AACGTT | 1 cut(s) | 3196 |
| Psp5II | RGGWCCY | 2 cut(s) | 106, 2840 |
| Psp6I | CCWGG | 6 cut(s) | 311, 2530, 3075, 3799, 4598, 4648 |
| PspEI | GGTNACC | 1 cut(s) | 3416 |
| PspFI | CCCAGC | 1 cut(s) | 4610 |
| PspGI | CCWGG | 6 cut(s) | 311, 2530, 3075, 3799, 4598, 4648 |
| PspN4I | GGNNCC | 8 cut(s) | 43, 108, 1152, 1816, 1945, 2196, 2529, 4716 |
| PspPI | GGNCC | 7 cut(s) | 106, 235, 770, 2840, 3870, 3977, 4748 |
| PspPPI | RGGWCCY | 2 cut(s) | 106, 2840 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1487, 2776, 3830 |
| PsuI | RGATCY | 5 cut(s) | 348, 1388, 2163, 2252, 4168 |
| PsyI | GACNNNGTC | 1 cut(s) | 610 |
| PvuII | CAGCTG | 2 cut(s) | 1121, 4614 |
| RseI | CAYNNNNRTG | 2 cut(s) | 473, 540 |
| SacI | GAGCTC | 2 cut(s) | 91, 4681 |
| Sau96I | GGNCC | 7 cut(s) | 106, 235, 770, 2840, 3870, 3977, 4748 |
| ScaI | AGTACT | 2 cut(s) | 1742, 1769 |
| SchI | GAGTC | 8 cut(s) | 488, 649, 1063, 1335, 2000, 2693, 4022, 4520 |
| ScrFI | CCNGG | 7 cut(s) | 313, 2532, 3017, 3077, 3801, 4600, 4650 |
| SduI | GDGCHC | 4 cut(s) | 91, 2530, 4681, 4882 |
| SfcI | CTRYAG | 1 cut(s) | 2683 |
| SinI | GGWCC | 5 cut(s) | 106, 770, 2840, 3870, 4748 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 473, 540 |
| SnaBI | TACGTA | 1 cut(s) | 449 |
| SphI | GCATGC | 1 cut(s) | 4868 |
| SsiI | CCGC | 3 cut(s) | 212, 1522, 4653 |
| SstI | GAGCTC | 2 cut(s) | 91, 4681 |
| StyD4I | CCNGG | 7 cut(s) | 311, 2530, 3015, 3075, 3799, 4598, 4648 |
| StyI | CCWWGG | 1 cut(s) | 2090 |
| TaiI | ACGT | 3 cut(s) | 451, 1180, 3199 |
| TaqI | TCGA | 8 cut(s) | 638, 1686, 1923, 2219, 2410, 2985, 3942, 4256 |
| TaqII | GACCGA | 1 cut(s) | 3858 |
| TatI | WGTACW | 9 cut(s) | 759, 812, 1740, 1767, 1868, 2639, 3679, 4462, 4546 |
| TscAI | CASTG | 8 cut(s) | 294, 467, 845, 1564, 2662, 3493, 4227, 4381 |
| TseFI | GTSAC | 5 cut(s) | 794, 1952, 2446, 3416, 4523 |
| Tsp45I | GTSAC | 5 cut(s) | 794, 1952, 2446, 3416, 4523 |
| TspGWI | ACGGA | 2 cut(s) | 1021, 4914 |
| TspRI | CASTG | 8 cut(s) | 294, 467, 845, 1564, 2662, 3493, 4227, 4381 |
| Tth111I | GACNNNGTC | 1 cut(s) | 610 |
| Vha464I | CTTAAG | 1 cut(s) | 1948 |
| VpaK11BI | GGWCC | 5 cut(s) | 106, 770, 2840, 3870, 4748 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3911 |
| XbaI | TCTAGA | 3 cut(s) | 1334, 2962, 3049 |
| XceI | RCATGY | 3 cut(s) | 1056, 2999, 4868 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 292 |
| XmiI | GTMKAC | 3 cut(s) | 925, 3258, 3537 |
| XmnI | GAANNNNTTC | 3 cut(s) | 560, 1192, 4644 |
| ZrmI | AGTACT | 2 cut(s) | 1742, 1769 |
| Zsp2I | ATGCAT | 6 cut(s) | 272, 918, 1229, 1546, 3572, 4503 |