Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004594

Physical Location & Seq

Genomic Coordinates Reverse (-)

8473585 .. 8479610

Gene Structure 6026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G060100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGGATAACTTGTGTTGCTTCAGTTCTGTCTATTCTCAGGTTGTAGGAGGGCGATCTTCATGTAGCTCCGGCAAGGGTAGGAGCCATCAGGGCCCAGTCAAGTATGGCTTTAGCCTAGTAAAAGGAAAAGCAAATCATCCAATGGAAGATTTTCATGTTGCAAAATTTGTGCACTCCCAGGGCCATGAACTTGGACTGTTTGCGATCTATGATGGGCACTTGGGAGACAGTGTGCCTGCCTATCTTCAGAAGCATTTGTTTCCGAATATCTTAAAGGATGAGGAGTTTTGGACTGATCCCAACAGGTCCATTTCGAAAGCCTACGAGAGAACAGACCAGGCAATTCTATCGCATAGTCCTGACTTGGGACGAGGTGGATCTACTGCAGTTACCGCAATTCTCATAAATGGCCACAAGTTATGGATTGCCAATGTTGGAGACTCACGAGCAGTTCTTTCAAGGAGAGGGCAGGCAGTACAGATGAGCATTGATCATGAACCCAACACCGAGCGTGGCAGCATTGAGGACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGTCAGCTGGCTGTATCTCGAGCTTTCGGAGACAAGAATCTCAAGACACACTTGAGGTCCGATCCAGATGTCCGAAGTTCTGATGTTGGATCAGAAACTGATGTTCTCATCCTTGCAAGTGACGGTCTATGGAAGGTCATGTCTAATCAAGAGGCAGTTGATATTGCCAGAAAGACAAAAGACCCGCATAAGGCAGCCAAACAATTAGTAGCTGAGGCATTAAACAGAGACAGCAAGGATGACATATCCTGCATCGTGGTTCGTCTCAAGGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

284

Amino Acids

30.82

Weight (kDa)

7.76

Isoelectric Point (pI)

46.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22280 AT1G22280 AT1G22280 AT1G34750 AT1G34750 AT1G34750 AT1G34750
fragaria_vesca	FvH4_5g37270 FvH4_5g37270 FvH4_5g37270 FvH4_5g37270 FvH4_5g37270
malus_domestica	MD08G1183600.v1.1 MD15G1370300.v1.1
prunus_persica	Prupe.1G517700_v2.0.a1 Prupe.1G517700_v2.0.a1 Prupe.8G060100_v2.0.a1 Prupe.8G060100_v2.0.a1 Prupe.8G060100_v2.0.a1
pyrus_communis	pycom08g15740 pycom15g33130
rosa_chinensis	RchiOBHm_Chr7g0238831
rosa_laevigata	RLG00000000802
rosa_multiflora	Rmu_sc0007101.1_g000011
rosa_roxburghii	Rroxscaffold_3G00221560
rosa_rugosa	Rorug07G0323700
rosa_samantha	Rh7AG477900 Rh7BG450600 Rh7CG495800 Rh7DG463100
rosa_wichuraiana	Rw7G039900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	393, 761
AclWI	GGATC	4 cut(s)	290, 385, 632, 673
AcoI	YGGCCR	1 cut(s)	409
AcsI	RAATTY	1 cut(s)	164
AcuI	CTGAAG	2 cut(s)	4, 230
AfaI	GTAC	1 cut(s)	477
AfiI	CCNNNNNNNGG	2 cut(s)	365, 766
AgsI	TTSAA	1 cut(s)	459
AjnI	CCWGG	3 cut(s)	177, 336, 553
AluBI	AGCT	4 cut(s)	66, 583, 599, 788
AluI	AGCT	4 cut(s)	66, 583, 599, 788
Alw21I	GWGCWC	1 cut(s)	174
Alw26I	GTCTC	6 cut(s)	219, 432, 547, 600, 798, 845
Alw44I	GTGCAC	1 cut(s)	170
AlwI	GGATC	4 cut(s)	290, 385, 632, 673
AlwNI	CAGNNNCTG	1 cut(s)	674
Ama87I	CYCGRG	1 cut(s)	594
AoxI	GGCC	3 cut(s)	91, 181, 409
ApaI	GGGCCC	1 cut(s)	95
ApaLI	GTGCAC	1 cut(s)	170
ApeKI	GCWGC	2 cut(s)	516, 770
ApoI	RAATTY	1 cut(s)	164
Asp700I	GAANNNNTTC	1 cut(s)	150
AspS9I	GGNCC	5 cut(s)	91, 92, 181, 306, 633
AsuHPI	GGTGA	1 cut(s)	583
AsuII	TTCGAA	1 cut(s)	314
AvaI	CYCGRG	1 cut(s)	594
AvaII	GGWCC	2 cut(s)	306, 633
BaeGI	GKGCMC	3 cut(s)	95, 174, 219
BalI	TGGCCA	1 cut(s)	411
BanII	GRGCYC	1 cut(s)	95
BauI	CACGAG	1 cut(s)	444
Bbv12I	GWGCWC	1 cut(s)	174
BbvCI	CCTCAGC	1 cut(s)	789
BbvI	GCAGC	2 cut(s)	528, 782
BccI	CCATC	2 cut(s)	93, 206
BcgI	CGANNNNNNTGC	2 cut(s)	330, 364
BciT130I	CCWGG	3 cut(s)	179, 338, 555
BclI	TGATCA	1 cut(s)	490
BcoDI	GTCTC	6 cut(s)	219, 432, 547, 600, 798, 845
BfaI	CTAG	1 cut(s)	116
BfmI	CTRYAG	1 cut(s)	384
BglI	GCCNNNNNGGC	1 cut(s)	90
BisI	GCNGC	2 cut(s)	517, 771
BlsI	GCNGC	2 cut(s)	518, 772
Bme1390I	CCNGG	3 cut(s)	179, 338, 555
Bme18I	GGWCC	2 cut(s)	306, 633
BmeT110I	CYCGRG	1 cut(s)	594
BmgT120I	GGNCC	5 cut(s)	91, 92, 181, 306, 633
BmiI	GGNNCC	2 cut(s)	83, 93
BmrFI	CCNGG	3 cut(s)	179, 338, 555
BmrI	ACTGGG	1 cut(s)	89
BmsI	GCATC	1 cut(s)	837
BmuI	ACTGGG	1 cut(s)	89
Bpu10I	CCTNAGC	1 cut(s)	789
Bpu14I	TTCGAA	1 cut(s)	314
BpuEI	CTTGAG	3 cut(s)	602, 649, 827
BsaJI	CCNNGG	2 cut(s)	177, 178
BsaXI	ACNNNNNCTCC	2 cut(s)	216, 246
Bsc4I	CCNNNNNNNGG	2 cut(s)	365, 766
Bse1I	ACTGG	1 cut(s)	95
BseBI	CCWGG	3 cut(s)	179, 338, 555
BseDI	CCNNGG	2 cut(s)	177, 178
BseGI	GGATG	4 cut(s)	136, 283, 684, 820
BseLI	CCNNNNNNNGG	2 cut(s)	365, 766
BseMII	CTCAG	2 cut(s)	50, 780
BseNI	ACTGG	1 cut(s)	95
BseRI	GAGGAG	1 cut(s)	296
BseSI	GKGCMC	3 cut(s)	95, 174, 219
BseXI	GCAGC	2 cut(s)	528, 782
BshFI	GGCC	3 cut(s)	93, 183, 411
BsiHKAI	GWGCWC	1 cut(s)	174
BsiHKCI	CYCGRG	1 cut(s)	594
BsiSI	CCGG	1 cut(s)	69
BslFI	GGGAC	1 cut(s)	381
BslI	CCNNNNNNNGG	2 cut(s)	365, 766
BsmAI	GTCTC	6 cut(s)	219, 432, 547, 600, 798, 845
BsmBI	CGTCTC	1 cut(s)	845
BsmFI	GGGAC	1 cut(s)	381
BsnI	GGCC	3 cut(s)	93, 183, 411
BsoBI	CYCGRG	1 cut(s)	594
Bsp119I	TTCGAA	1 cut(s)	314
Bsp120I	GGGCCC	1 cut(s)	91
Bsp1286I	GDGCHC	3 cut(s)	95, 174, 219
Bsp143I	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
BspACI	CCGC	2 cut(s)	393, 761
BspANI	GGCC	3 cut(s)	93, 183, 411
BspCNI	CTCAG	2 cut(s)	49, 781
BspHI	TCATGA	1 cut(s)	493
BspLI	GGNNCC	2 cut(s)	83, 93
BspMAI	CTGCAG	1 cut(s)	388
BspPI	GGATC	4 cut(s)	290, 385, 632, 673
BspT104I	TTCGAA	1 cut(s)	314
BsrI	ACTGG	1 cut(s)	95
BssECI	CCNNGG	2 cut(s)	177, 178
BssMI	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
BssSI	CACGAG	1 cut(s)	444
Bst2BI	CACGAG	1 cut(s)	444
Bst2UI	CCWGG	3 cut(s)	179, 338, 555
Bst4CI	ACNGT	3 cut(s)	198, 230, 701
BstBI	TTCGAA	1 cut(s)	314
BstC8I	GCNNGC	3 cut(s)	237, 471, 585
BstDEI	CTNAG	2 cut(s)	36, 789
BstF5I	GGATG	4 cut(s)	136, 283, 684, 820
BstKTI	GATC	7 cut(s)	56, 207, 298, 380, 493, 640, 668
BstMAI	GTCTC	6 cut(s)	219, 432, 547, 600, 798, 845
BstMBI	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
BstMWI	GCNNNNNNNGC	2 cut(s)	90, 392
BstNI	CCWGG	3 cut(s)	179, 338, 555
BstNSI	RCATGY	1 cut(s)	553
BstSCI	CCNGG	3 cut(s)	177, 336, 553
BstSFI	CTRYAG	1 cut(s)	384
BstSLI	GKGCMC	3 cut(s)	95, 174, 219
BstV1I	GCAGC	2 cut(s)	528, 782
BstX2I	RGATCY	1 cut(s)	377
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	1 cut(s)	377
BsuRI	GGCC	3 cut(s)	93, 183, 411
BtsCI	GGATG	4 cut(s)	136, 283, 684, 820
BtsIMutI	CAGTG	1 cut(s)	235
Cac8I	GCNNGC	3 cut(s)	237, 471, 585
CaiI	CAGNNNCTG	1 cut(s)	674
CciI	TCATGA	1 cut(s)	493
Cfr13I	GGNCC	5 cut(s)	91, 92, 181, 306, 633
Csp6I	GTAC	1 cut(s)	476
CviAII	CATG	6 cut(s)	60, 155, 185, 494, 550, 715
CviQI	GTAC	1 cut(s)	476
DdeI	CTNAG	2 cut(s)	36, 789
DpnI	GATC	7 cut(s)	55, 206, 297, 379, 492, 639, 667
DpnII	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
EaeI	YGGCCR	1 cut(s)	409
Eco24I	GRGCYC	1 cut(s)	95
Eco47I	GGWCC	2 cut(s)	306, 633
Eco57I	CTGAAG	2 cut(s)	4, 230
Eco88I	CYCGRG	1 cut(s)	594
EcoO109I	RGGNCCY	1 cut(s)	91
EcoRII	CCWGG	3 cut(s)	177, 336, 553
EcoT38I	GRGCYC	1 cut(s)	95
Esp3I	CGTCTC	1 cut(s)	845
FaeI	CATG	6 cut(s)	63, 158, 188, 497, 553, 718
FalI	AAGNNNNNCTT	4 cut(s)	92, 124, 611, 643
FaqI	GGGAC	1 cut(s)	381
FatI	CATG	6 cut(s)	59, 154, 184, 493, 549, 714
FauI	CCCGC	1 cut(s)	768
FbaI	TGATCA	1 cut(s)	490
Fnu4HI	GCNGC	2 cut(s)	517, 771
FokI	GGATG	4 cut(s)	123, 290, 671, 827
FriOI	GRGCYC	1 cut(s)	95
Fsp4HI	GCNGC	2 cut(s)	517, 771
FspBI	CTAG	1 cut(s)	116
GluI	GCNGC	2 cut(s)	517, 771
HaeIII	GGCC	3 cut(s)	93, 183, 411
HapII	CCGG	1 cut(s)	69
Hin1II	CATG	6 cut(s)	63, 158, 188, 497, 553, 718
HinfI	GANTC	2 cut(s)	440, 613
HpaII	CCGG	1 cut(s)	69
HphI	GGTGA	1 cut(s)	583
Hpy166II	GTNNAC	1 cut(s)	172
Hpy188I	TCNGA	7 cut(s)	249, 264, 605, 637, 650, 658, 670
Hpy188III	TCNNGA	7 cut(s)	359, 444, 494, 594, 619, 641, 725
Hpy8I	GTNNAC	1 cut(s)	172
HpyAV	CCTTC	1 cut(s)	703
HpyCH4III	ACNGT	3 cut(s)	198, 230, 701
HpyCH4V	TGCA	6 cut(s)	161, 172, 386, 566, 692, 828
HpyF10VI	GCNNNNNNNGC	2 cut(s)	90, 392
HpyF3I	CTNAG	2 cut(s)	36, 789
Hsp92II	CATG	6 cut(s)	63, 158, 188, 497, 553, 718
Ksp22I	TGATCA	1 cut(s)	490
Kzo9I	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
LmnI	GCTCC	2 cut(s)	71, 81
Lsp1109I	GCAGC	2 cut(s)	528, 782
LweI	GCATC	1 cut(s)	837
MaeI	CTAG	1 cut(s)	116
MaeIII	GTNAC	2 cut(s)	388, 695
MalI	GATC	7 cut(s)	55, 206, 297, 379, 492, 639, 667
MboI	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
MboII	GAAGA	3 cut(s)	48, 158, 236
MflI	RGATCY	1 cut(s)	377
MhlI	GDGCHC	3 cut(s)	95, 174, 219
MlsI	TGGCCA	1 cut(s)	411
MluCI	AATT	4 cut(s)	164, 342, 396, 779
MluNI	TGGCCA	1 cut(s)	411
MlyI	GAGTC	1 cut(s)	434
MmeI	TCCRAC	2 cut(s)	415, 643
MnlI	CCTC	9 cut(s)	41, 274, 365, 458, 517, 524, 624, 721, 784
Mox20I	TGGCCA	1 cut(s)	411
MroXI	GAANNNNTTC	1 cut(s)	150
MscI	TGGCCA	1 cut(s)	411
MseI	TTAA	2 cut(s)	272, 797
Msp20I	TGGCCA	1 cut(s)	411
MspA1I	CMGCKG	1 cut(s)	583
MspI	CCGG	1 cut(s)	69
MspR9I	CCNGG	3 cut(s)	179, 338, 555
MvaI	CCWGG	3 cut(s)	179, 338, 555
MwoI	GCNNNNNNNGC	2 cut(s)	90, 392
NdeII	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
NlaIII	CATG	6 cut(s)	63, 158, 188, 497, 553, 718
NlaIV	GGNNCC	2 cut(s)	83, 93
NmuCI	GTSAC	1 cut(s)	695
NspI	RCATGY	1 cut(s)	553
NspV	TTCGAA	1 cut(s)	314
PaeR7I	CTCGAG	1 cut(s)	594
PagI	TCATGA	1 cut(s)	493
PasI	CCCWGGG	1 cut(s)	178
PdmI	GAANNNNTTC	1 cut(s)	150
PfeI	GAWTC	1 cut(s)	613
PkrI	GCNGC	2 cut(s)	518, 772
PleI	GAGTC	1 cut(s)	434
PpsI	GAGTC	1 cut(s)	434
Psp6I	CCWGG	3 cut(s)	177, 336, 553
PspGI	CCWGG	3 cut(s)	177, 336, 553
PspN4I	GGNNCC	2 cut(s)	83, 93
PspOMI	GGGCCC	1 cut(s)	91
PspPI	GGNCC	5 cut(s)	91, 92, 181, 306, 633
PstI	CTGCAG	1 cut(s)	388
PstNI	CAGNNNCTG	1 cut(s)	674
PsuI	RGATCY	1 cut(s)	377
PvuII	CAGCTG	1 cut(s)	583
RsaI	GTAC	1 cut(s)	477
RsaNI	GTAC	1 cut(s)	476
SaqAI	TTAA	2 cut(s)	272, 797
SatI	GCNGC	2 cut(s)	517, 771
Sau3AI	GATC	7 cut(s)	53, 204, 295, 377, 490, 637, 665
Sau96I	GGNCC	5 cut(s)	91, 92, 181, 306, 633
SchI	GAGTC	1 cut(s)	434
ScrFI	CCNGG	3 cut(s)	179, 338, 555
SduI	GDGCHC	3 cut(s)	95, 174, 219
SfaNI	GCATC	1 cut(s)	837
SfcI	CTRYAG	1 cut(s)	384
Sfr274I	CTCGAG	1 cut(s)	594
SfuI	TTCGAA	1 cut(s)	314
SinI	GGWCC	2 cut(s)	306, 633
SlaI	CTCGAG	1 cut(s)	594
SmlI	CTYRAG	4 cut(s)	594, 617, 628, 842
SmoI	CTYRAG	4 cut(s)	594, 617, 628, 842
Sse9I	AATT	4 cut(s)	164, 342, 396, 779
SsiI	CCGC	2 cut(s)	393, 761
SspMI	CTAG	1 cut(s)	116
StyD4I	CCNGG	3 cut(s)	177, 336, 553
TaaI	ACNGT	3 cut(s)	198, 230, 701
TaqI	TCGA	2 cut(s)	314, 595
TasI	AATT	4 cut(s)	164, 342, 396, 779
TatI	WGTACW	1 cut(s)	475
TfiI	GAWTC	1 cut(s)	613
Tru1I	TTAA	2 cut(s)	272, 797
Tru9I	TTAA	2 cut(s)	272, 797
TscAI	CASTG	1 cut(s)	235
TseFI	GTSAC	1 cut(s)	695
TseI	GCWGC	2 cut(s)	516, 770
Tsp45I	GTSAC	1 cut(s)	695
TspDTI	ATGAA	4 cut(s)	48, 143, 201, 510
TspRI	CASTG	1 cut(s)	235
VneI	GTGCAC	1 cut(s)	170
VpaK11BI	GGWCC	2 cut(s)	306, 633
XapI	RAATTY	1 cut(s)	164
XceI	RCATGY	1 cut(s)	553
XhoI	CTCGAG	1 cut(s)	594
XmnI	GAANNNNTTC	1 cut(s)	150
XspI	CTAG	1 cut(s)	116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.