Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0011302

Physical Location & Seq

Genomic Coordinates Forward (+)

12112405 .. 12120297

Gene Structure 7893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G088000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGGGTTTGGATGATTTCTCATATTTGCGGCCTTTCTCTCACTCTCACTCCCGCCACTGTCCGTACAAGCTTCCCTCTATGGCCTCCTCCTTCTCGTTCATGCCCGCGCCCCCGTCCGTACAAGCTCATCGATGCTCCTCTTCACCTTCTCCCCGCCAAGAGGTATATTATTGCGGTGGATTAAGAACTTCATTTCTCAAGAATTGGGATGTTACGGGGGTGTCGAGTTCAAAGCGGTTCGGCTCCACCACTCATATGAATTGGAAGAGGAGGAGAACTTTGATCTGTGCAGTCAATCAAGATGCCGAGGGAGCATTCAAAAAGACTGTAGAAGTGGATAGGCTGATAGACAAACTAAGAGATGCAAATCCAATTGAACTTCAGAAGCTTGTTGTTGAAAATGTCTTGGCTTTTAATGAGGGCTTTTGGATACGGCTTGCGGCAAGAACTGATACCTGCAAATCGGAGGATGATAAAAAGGACTATGAGGAATTGGCTATATCTATAATGAGCATAGTGGATCGCCTTGTTCATAAGACCAATGAAAAGATAGATTCAGCTACTGATGTCCTCAAGGGGATTCTGAAACCTGTAGTTGATGAAGTAGAAGAAATTCAATGGCCTCCTAGAGATCCCGAGGCTCTTAAATTAATGGAGAAAGAATTAGTCCAAAGGGAGGAAGATGGACAACTGGACGAAGGGTTTCTTTCAGAAGTTAATGCTCAACTACGACAAGCAAAAGGAGATGGAGATAAGCCAGGGTTTGAGGCTATGTTACAAAAGGTTTTACAACTCTATGCTTCTACTGTTCTATCCAAGCGTAGCTATGCAAAAAAAGGGGATGAAATTCTGAAGGCCGAGCAGTTTCTAGAAACCATAATCAAAGCTCCTGAAGAAGAATGGAACAAGCTGCTGCTCAATGGATTAACATTTGGCAAAGGGGAAATTTTACCACAGGAGCTCTATGCTGTCATTAAGAAGAGGGTTGAAAGGACTCTGATCCGAACAGAGGGAGGTTCATACCAGCAACGTGTTCTTACGGAGTATCTCAATGGCATCCAATTGAGAGCAGAGCAAATTGTCCAACTACTTCAGGGCAAGCTGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

370

Amino Acids

42.02

Weight (kDa)

6.64

Isoelectric Point (pI)

49.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011302)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21385 AT2G21385 AT2G21385 AT2G21385 AT2G21385
fragaria_vesca	FvH4_2g10050
malus_domestica	MD10G1066100.v1.1
prunus_persica	Prupe.8G088000_v2.0.a1 Prupe.8G088000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0266981
rosa_laevigata	RLG00000014054
rosa_multiflora	Rmu_sc0011492.1_g000003 Rmu_sc0017071.1_g000006
rosa_roxburghii	Rroxscaffold_7G00201240
rosa_rugosa	Rorug06G0028400
rosa_samantha	Rh6AG149800 Rh6BG150700 Rh6CG145800 Rh6DG134800
rosa_wichuraiana	Rw6G012970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	464
AccII	CGCG	1 cut(s)	107
AciI	CCGC	7 cut(s)	28, 52, 105, 154, 174, 235, 440
AclWI	GGATC	3 cut(s)	528, 626, 994
AcsI	RAATTY	3 cut(s)	612, 846, 945
AcuI	CTGAAG	4 cut(s)	365, 872, 912, 1076
AfaI	GTAC	2 cut(s)	65, 120
AfiI	CCNNNNNNNGG	3 cut(s)	160, 676, 1009
AflIII	ACRYGT	1 cut(s)	1030
AgsI	TTSAA	6 cut(s)	231, 319, 377, 398, 617, 989
AjnI	CCWGG	1 cut(s)	757
AluBI	AGCT	9 cut(s)	70, 125, 388, 560, 825, 887, 910, 961, 1102
AluI	AGCT	9 cut(s)	70, 125, 388, 560, 825, 887, 910, 961, 1102
Alw21I	GWGCWC	1 cut(s)	963
AlwI	GGATC	3 cut(s)	528, 626, 994
AlwNI	CAGNNNCTG	1 cut(s)	563
Ama87I	CYCGRG	1 cut(s)	635
AoxI	GGCC	4 cut(s)	29, 81, 620, 855
ApeKI	GCWGC	3 cut(s)	910, 913, 1102
ApoI	RAATTY	3 cut(s)	612, 846, 945
AseI	ATTAAT	1 cut(s)	650
Asp700I	GAANNNNTTC	2 cut(s)	612, 702
AspLEI	GCGC	1 cut(s)	109
AsuHPI	GGTGA	1 cut(s)	135
AvaI	CYCGRG	1 cut(s)	635
BanII	GRGCYC	1 cut(s)	963
Bbv12I	GWGCWC	1 cut(s)	963
BbvI	GCAGC	3 cut(s)	897, 900, 1089
BccI	CCATC	2 cut(s)	677, 740
BceAI	ACGGC	1 cut(s)	449
BciT130I	CCWGG	1 cut(s)	759
BciVI	GTATCC	1 cut(s)	423
BfaI	CTAG	2 cut(s)	627, 869
BfmI	CTRYAG	2 cut(s)	327, 591
BfuAI	ACCTGC	1 cut(s)	464
BfuI	GTATCC	1 cut(s)	423
BisI	GCNGC	5 cut(s)	29, 441, 911, 914, 1103
BlsI	GCNGC	5 cut(s)	30, 442, 912, 915, 1104
Bme1390I	CCNGG	1 cut(s)	759
BmeT110I	CYCGRG	1 cut(s)	635
BmiI	GGNNCC	1 cut(s)	244
BmrFI	CCNGG	1 cut(s)	759
BmsI	GCATC	4 cut(s)	122, 292, 352, 1065
BpuEI	CTTGAG	2 cut(s)	182, 557
Bsa29I	ATCGAT	1 cut(s)	130
BsaBI	GATNNNNATC	1 cut(s)	366
BsaJI	CCNNGG	3 cut(s)	306, 636, 758
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	3 cut(s)	160, 676, 1009
Bse1I	ACTGG	1 cut(s)	696
Bse8I	GATNNNNATC	1 cut(s)	366
BseBI	CCWGG	1 cut(s)	759
BseCI	ATCGAT	1 cut(s)	130
BseDI	CCNNGG	3 cut(s)	306, 636, 758
BseGI	GGATG	5 cut(s)	16, 214, 475, 847, 1056
BseJI	GATNNNNATC	1 cut(s)	366
BseLI	CCNNNNNNNGG	3 cut(s)	160, 676, 1009
BseNI	ACTGG	1 cut(s)	696
BseRI	GAGGAG	4 cut(s)	76, 127, 283, 286
BseXI	GCAGC	3 cut(s)	897, 900, 1089
BsgI	GTGCAG	1 cut(s)	309
Bsh1236I	CGCG	1 cut(s)	107
BshFI	GGCC	4 cut(s)	31, 83, 622, 857
BshVI	ATCGAT	1 cut(s)	130
BsiHKAI	GWGCWC	1 cut(s)	963
BsiHKCI	CYCGRG	1 cut(s)	635
BslI	CCNNNNNNNGG	3 cut(s)	160, 676, 1009
BsmI	GAATGC	1 cut(s)	314
BsnI	GGCC	4 cut(s)	31, 83, 622, 857
BsoBI	CYCGRG	1 cut(s)	635
Bsp1286I	GDGCHC	1 cut(s)	963
Bsp143I	GATC	4 cut(s)	282, 520, 631, 999
BspACI	CCGC	7 cut(s)	28, 52, 105, 154, 174, 235, 440
BspANI	GGCC	4 cut(s)	31, 83, 622, 857
BspDI	ATCGAT	1 cut(s)	130
BspFNI	CGCG	1 cut(s)	107
BspLI	GGNNCC	1 cut(s)	244
BspMI	ACCTGC	1 cut(s)	464
BspPI	GGATC	3 cut(s)	528, 626, 994
BsrI	ACTGG	1 cut(s)	696
BssECI	CCNNGG	3 cut(s)	306, 636, 758
BssMI	GATC	4 cut(s)	282, 520, 631, 999
Bst2UI	CCWGG	1 cut(s)	759
Bst4CI	ACNGT	3 cut(s)	59, 328, 808
Bst6I	CTCTTC	3 cut(s)	145, 260, 974
BstC8I	GCNNGC	3 cut(s)	105, 438, 1100
BstDEI	CTNAG	1 cut(s)	356
BstF5I	GGATG	5 cut(s)	16, 214, 475, 847, 1056
BstFNI	CGCG	1 cut(s)	107
BstHHI	GCGC	1 cut(s)	109
BstKTI	GATC	4 cut(s)	285, 523, 634, 1002
BstMBI	GATC	4 cut(s)	282, 520, 631, 999
BstMWI	GCNNNNNNNGC	1 cut(s)	311
BstNI	CCWGG	1 cut(s)	759
BstSCI	CCNGG	1 cut(s)	757
BstSFI	CTRYAG	2 cut(s)	327, 591
BstUI	CGCG	1 cut(s)	107
BstV1I	GCAGC	3 cut(s)	897, 900, 1089
BstX2I	RGATCY	1 cut(s)	631
BstYI	RGATCY	1 cut(s)	631
Bsu15I	ATCGAT	1 cut(s)	130
BsuI	GTATCC	1 cut(s)	423
BsuRI	GGCC	4 cut(s)	31, 83, 622, 857
BsuTUI	ATCGAT	1 cut(s)	130
BtsCI	GGATG	5 cut(s)	16, 214, 475, 847, 1056
BtsIMutI	CAGTG	1 cut(s)	55
BveI	ACCTGC	1 cut(s)	464
Cac8I	GCNNGC	3 cut(s)	105, 438, 1100
CaiI	CAGNNNCTG	1 cut(s)	563
CfoI	GCGC	1 cut(s)	109
ClaI	ATCGAT	1 cut(s)	130
Csp6I	GTAC	2 cut(s)	64, 119
CviAII	CATG	1 cut(s)	100
CviQI	GTAC	2 cut(s)	64, 119
DdeI	CTNAG	1 cut(s)	356
DpnI	GATC	4 cut(s)	284, 522, 633, 1001
DpnII	GATC	4 cut(s)	282, 520, 631, 999
Eam1104I	CTCTTC	3 cut(s)	145, 260, 974
EarI	CTCTTC	3 cut(s)	145, 260, 974
Ecl136II	GAGCTC	1 cut(s)	961
Eco24I	GRGCYC	1 cut(s)	963
Eco53kI	GAGCTC	1 cut(s)	961
Eco57I	CTGAAG	4 cut(s)	365, 872, 912, 1076
Eco88I	CYCGRG	1 cut(s)	635
EcoICRI	GAGCTC	1 cut(s)	961
EcoRII	CCWGG	1 cut(s)	757
EcoT38I	GRGCYC	1 cut(s)	963
FaeI	CATG	1 cut(s)	103
FalI	AAGNNNNNCTT	2 cut(s)	690, 722
FatI	CATG	1 cut(s)	99
FauI	CCCGC	3 cut(s)	59, 112, 161
FauNDI	CATATG	1 cut(s)	255
Fnu4HI	GCNGC	5 cut(s)	29, 441, 911, 914, 1103
FokI	GGATG	5 cut(s)	23, 221, 482, 854, 1043
FriOI	GRGCYC	1 cut(s)	963
Fsp4HI	GCNGC	5 cut(s)	29, 441, 911, 914, 1103
FspBI	CTAG	2 cut(s)	627, 869
GlaI	GCGC	1 cut(s)	108
GluI	GCNGC	5 cut(s)	29, 441, 911, 914, 1103
HaeIII	GGCC	4 cut(s)	31, 83, 622, 857
HhaI	GCGC	1 cut(s)	109
Hin1II	CATG	1 cut(s)	103
Hin6I	GCGC	1 cut(s)	107
HinP1I	GCGC	1 cut(s)	107
HindIII	AAGCTT	2 cut(s)	68, 386
HinfI	GANTC	3 cut(s)	554, 580, 994
HphI	GGTGA	1 cut(s)	135
Hpy188I	TCNGA	7 cut(s)	384, 466, 585, 712, 852, 999, 1004
Hpy188III	TCNNGA	5 cut(s)	199, 299, 635, 869, 890
HpyAV	CCTTC	4 cut(s)	100, 156, 692, 847
HpyCH4III	ACNGT	3 cut(s)	59, 328, 808
HpyCH4IV	ACGT	1 cut(s)	1030
HpyCH4V	TGCA	5 cut(s)	290, 365, 459, 830, 1105
HpyF10VI	GCNNNNNNNGC	1 cut(s)	311
HpyF3I	CTNAG	1 cut(s)	356
HpySE526I	ACGT	1 cut(s)	1030
Hsp92II	CATG	1 cut(s)	103
HspAI	GCGC	1 cut(s)	107
Kzo9I	GATC	4 cut(s)	282, 520, 631, 999
LmnI	GCTCC	5 cut(s)	140, 248, 311, 892, 958
LpnPI	CCDG	9 cut(s)	469, 603, 677, 744, 771, 903, 941, 1037, 1079
Lsp1109I	GCAGC	3 cut(s)	897, 900, 1089
LweI	GCATC	4 cut(s)	122, 292, 352, 1065
MaeI	CTAG	2 cut(s)	627, 869
MaeII	ACGT	1 cut(s)	1030
MaeIII	GTNAC	2 cut(s)	211, 774
MalI	GATC	4 cut(s)	284, 522, 633, 1001
MboI	GATC	4 cut(s)	282, 520, 631, 999
MboII	GAAGA	7 cut(s)	132, 277, 620, 692, 905, 908, 991
MfeI	CAATTG	2 cut(s)	372, 1061
MflI	RGATCY	1 cut(s)	631
MhlI	GDGCHC	1 cut(s)	963
MlyI	GAGTC	1 cut(s)	988
MmeI	TCCRAC	1 cut(s)	1108
MroXI	GAANNNNTTC	2 cut(s)	612, 702
MseI	TTAA	7 cut(s)	182, 414, 645, 650, 717, 926, 975
MslI	CAYNNNNRTG	1 cut(s)	254
MspR9I	CCNGG	1 cut(s)	759
MunI	CAATTG	2 cut(s)	372, 1061
Mva1269I	GAATGC	1 cut(s)	314
MvaI	CCWGG	1 cut(s)	759
MvnI	CGCG	1 cut(s)	107
MwoI	GCNNNNNNNGC	1 cut(s)	311
NdeI	CATATG	1 cut(s)	255
NdeII	GATC	4 cut(s)	282, 520, 631, 999
NlaIII	CATG	1 cut(s)	103
NlaIV	GGNNCC	1 cut(s)	244
NmeAIII	GCCGAG	2 cut(s)	331, 883
PcsI	WCGNNNNNNNCGW	1 cut(s)	221
PctI	GAATGC	1 cut(s)	314
PdmI	GAANNNNTTC	2 cut(s)	612, 702
PfeI	GAWTC	2 cut(s)	554, 580
PkrI	GCNGC	5 cut(s)	30, 442, 912, 915, 1104
PleI	GAGTC	1 cut(s)	988
PpsI	GAGTC	1 cut(s)	988
PshBI	ATTAAT	1 cut(s)	650
Psp124BI	GAGCTC	1 cut(s)	963
Psp6I	CCWGG	1 cut(s)	757
PspGI	CCWGG	1 cut(s)	757
PspN4I	GGNNCC	1 cut(s)	244
PstNI	CAGNNNCTG	1 cut(s)	563
PsuI	RGATCY	1 cut(s)	631
RsaI	GTAC	2 cut(s)	65, 120
RsaNI	GTAC	2 cut(s)	64, 119
RseI	CAYNNNNRTG	1 cut(s)	254
SacI	GAGCTC	1 cut(s)	963
SaqAI	TTAA	7 cut(s)	182, 414, 645, 650, 717, 926, 975
SatI	GCNGC	5 cut(s)	29, 441, 911, 914, 1103
Sau3AI	GATC	4 cut(s)	282, 520, 631, 999
SchI	GAGTC	1 cut(s)	988
ScrFI	CCNGG	1 cut(s)	759
SduI	GDGCHC	1 cut(s)	963
SfaNI	GCATC	4 cut(s)	122, 292, 352, 1065
SfcI	CTRYAG	2 cut(s)	327, 591
SmiMI	CAYNNNNRTG	1 cut(s)	254
SmlI	CTYRAG	2 cut(s)	197, 572
SmoI	CTYRAG	2 cut(s)	197, 572
SsiI	CCGC	7 cut(s)	28, 52, 105, 154, 174, 235, 440
SspMI	CTAG	2 cut(s)	627, 869
SstI	GAGCTC	1 cut(s)	963
StyD4I	CCNGG	1 cut(s)	757
TaaI	ACNGT	3 cut(s)	59, 328, 808
TaiI	ACGT	1 cut(s)	1033
TaqI	TCGA	2 cut(s)	130, 224
TauI	GCSGC	2 cut(s)	31, 443
TfiI	GAWTC	2 cut(s)	554, 580
Tru1I	TTAA	7 cut(s)	182, 414, 645, 650, 717, 926, 975
Tru9I	TTAA	7 cut(s)	182, 414, 645, 650, 717, 926, 975
TscAI	CASTG	1 cut(s)	62
TseI	GCWGC	3 cut(s)	910, 913, 1102
TspDTI	ATGAA	8 cut(s)	88, 180, 272, 521, 558, 615, 858, 1008
TspGWI	ACGGA	3 cut(s)	51, 106, 1055
TspRI	CASTG	1 cut(s)	62
VspI	ATTAAT	1 cut(s)	650
XapI	RAATTY	3 cut(s)	612, 846, 945
XbaI	TCTAGA	1 cut(s)	868
XmnI	GAANNNNTTC	2 cut(s)	612, 702
XspI	CTAG	2 cut(s)	627, 869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.