Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0010954

Physical Location & Seq

Genomic Coordinates Reverse (-)

12377914 .. 12381580

Gene Structure 3667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G090900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGCTTTCACAGGTTCCCAAACCCCTCTCCTTCTTCCAAAACCCATCGCCCTCCATTCCCATTCCCAATCCCACCACTCCCACTCTCCGCTTCTCAACTCCCAAGCCCTCACTCTCACTCCTCCGCCTCCCTCTCTCTCCTCGCCGGCTCACACTCGCAATGGCCTCCGATCCCGGCCGTCCAGACTCCACCGTTCCGCTCCCGCCCAAAAGTTTCGAGCTTGATCAATTCGCTGAGGTTGCCAACAAGGTAGCCGATGCCTCTGGTGAAGTCATTAGGAAATTCTTCCGTCAGAAATTTGACATTCTCGATAAAAAAGATTCCAGCCCTGTGACAATTGCAGATCAAACAGCGGAGGAAACTATGGTTTCGATTTTATTAGAGAATTTTCCTTCTCATGCTGTATATGGAGAGGAGAATGGGTGGAAGTGCAAAGAGAAGGCTGCGGACTATGTATGGGTTTTAGATCCAATAGATGGAACAAAGAGCTTTATCACTGGAAAACCTGTGTTTGGTACTCTCATTGCTCTGCTACAGCGGGGTAAACCAATTCTTGGCATAATTGATCAGCCTATTTTAAGAGAAAGATGGGTTGGGATGAGTGGAAGGAAAACTACATTGAATGGGCAAGTAGTGTCTACACGCAATTGTGCAAATCTGGCACAGGCTTATTTGTACACTACAAGCCCACATCTATTCAGCGCAGAGGCAGAAGAGGCATTTATTCGTGTTAGAAATAAGGTGAAAGTACCACTGTACGGCTGTGACTGCTATGCTTATGCTCTTCTGGCTTCTGGTTTTGTGGATCTTGTTGTTGAGTCTGGTCTCAAGCCATACGATTTTCTTTCACTGATACCCGTGATAGAAGGTGCTGGAGGTGTTATTACTGATTGGAAGGGACATCAGCTTTATTGGGAAGCTTCTCCAAATTCACATGTGACAAGTTTTAATGTAGTGGCAGCTGGAGATAAACATATTCACCAACAAGCTCTAGATTCATTACAATGGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000105 GO:0003674 GO:0003824 GO:0004401 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006547 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0018130 GO:0019438 GO:0019752 GO:0034641 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0052745 GO:0052803 GO:0052834 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00053 ko00340 ko00562 ko01100 ko01110 ko01230 ko04070 map00053 map00340 map00562 map01100 map01110 map01230 map04070

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

338

Amino Acids

37.2

Weight (kDa)

7.01

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010954)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39120 AT4G39120
fragaria_vesca	FvH4_2g09630 FvH4_2g09630 FvH4_2g09630 FvH4_2g09630
malus_domestica	MD05G1061200.v1.1 MD10G1068900.v1.1
prunus_persica	Prupe.8G090900_v2.0.a1
pyrus_communis	pycom05g05220 pycom10g05500
rosa_chinensis	RchiOBHm_Chr6g0265981
rosa_laevigata	RLG00000014141
rosa_multiflora	Rmu_sc0030533.1_g000003
rosa_roxburghii	Rroxscaffold_7G00202170
rosa_rugosa	Rorug06G0022100
rosa_samantha	Rh6AG143300 Rh6BG143600 Rh6CG140300
rosa_wichuraiana	Rw6G012390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	476, 554
AccBSI	CCGCTC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	638
AciI	CCGC	7 cut(s)	88, 124, 197, 203, 353, 446, 538
AclWI	GGATC	3 cut(s)	164, 461, 813
AcoI	YGGCCR	1 cut(s)	175
AcsI	RAATTY	4 cut(s)	281, 296, 385, 928
AfaI	GTAC	4 cut(s)	517, 677, 750, 758
AfiI	CCNNNNNNNGG	4 cut(s)	476, 512, 554, 758
AflIII	ACRYGT	1 cut(s)	934
AgsI	TTSAA	1 cut(s)	622
AjuI	GAANNNNNNNTTGG	2 cut(s)	576, 608
AluBI	AGCT	6 cut(s)	220, 489, 907, 920, 962, 989
AluI	AGCT	6 cut(s)	220, 489, 907, 920, 962, 989
Alw26I	GTCTC	1 cut(s)	830
AlwI	GGATC	3 cut(s)	164, 461, 813
AoxI	GGCC	2 cut(s)	162, 175
ApeKI	GCWGC	2 cut(s)	443, 959
ApoI	RAATTY	4 cut(s)	281, 296, 385, 928
Asp700I	GAANNNNTTC	1 cut(s)	284
AspLEI	GCGC	1 cut(s)	704
AsuC2I	CCSGG	1 cut(s)	174
AsuHPI	GGTGA	3 cut(s)	278, 754, 971
BarI	GAAGNNNNNNTAC	2 cut(s)	598, 630
BbvCI	CCTCAGC	1 cut(s)	234
BbvI	GCAGC	2 cut(s)	430, 971
BccI	CCATC	3 cut(s)	52, 470, 582
BceAI	ACGGC	2 cut(s)	162, 775
BclI	TGATCA	2 cut(s)	223, 565
BcnI	CCSGG	1 cut(s)	174
BcoDI	GTCTC	1 cut(s)	830
BfaI	CTAG	1 cut(s)	992
BfmI	CTRYAG	1 cut(s)	533
BisI	GCNGC	2 cut(s)	444, 960
BlsI	GCNGC	2 cut(s)	445, 961
Bme1390I	CCNGG	1 cut(s)	174
BmiI	GGNNCC	1 cut(s)	15
BmrFI	CCNGG	1 cut(s)	174
BmsI	GCATC	1 cut(s)	247
BpmI	CTGGAG	2 cut(s)	894, 984
Bpu10I	CCTNAGC	1 cut(s)	234
BpuEI	CTTGAG	1 cut(s)	812
BpuMI	CCSGG	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	830
BsaXI	ACNNNNNCTCC	4 cut(s)	102, 132, 407, 437
Bsc4I	CCNNNNNNNGG	4 cut(s)	476, 512, 554, 758
Bse118I	RCCGGY	1 cut(s)	144
Bse1I	ACTGG	1 cut(s)	502
Bse3DI	GCAATG	2 cut(s)	165, 522
BseGI	GGATG	1 cut(s)	603
BseLI	CCNNNNNNNGG	4 cut(s)	476, 512, 554, 758
BseMI	GCAATG	2 cut(s)	165, 522
BseMII	CTCAG	1 cut(s)	225
BseNI	ACTGG	1 cut(s)	502
BseRI	GAGGAG	3 cut(s)	110, 129, 428
BseX3I	CGGCCG	1 cut(s)	175
BseXI	GCAGC	2 cut(s)	430, 971
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	2 cut(s)	164, 177
BsiEI	CGRYCG	1 cut(s)	178
BsiSI	CCGG	2 cut(s)	145, 174
BslFI	GGGAC	1 cut(s)	912
BslI	CCNNNNNNNGG	4 cut(s)	476, 512, 554, 758
BsmAI	GTCTC	1 cut(s)	830
BsmFI	GGGAC	1 cut(s)	912
BsnI	GGCC	2 cut(s)	164, 177
Bso31I	GGTCTC	1 cut(s)	830
Bsp1407I	TGTACA	1 cut(s)	675
Bsp143I	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
BspACI	CCGC	7 cut(s)	88, 124, 197, 203, 353, 446, 538
BspANI	GGCC	2 cut(s)	164, 177
BspCNI	CTCAG	1 cut(s)	226
BspLI	GGNNCC	1 cut(s)	15
BspPI	GGATC	3 cut(s)	164, 461, 813
BspQI	GCTCTTC	1 cut(s)	789
BspTNI	GGTCTC	1 cut(s)	830
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	2 cut(s)	165, 522
BsrFI	RCCGGY	1 cut(s)	144
BsrGI	TGTACA	1 cut(s)	675
BsrI	ACTGG	1 cut(s)	502
BssAI	RCCGGY	1 cut(s)	144
BssMI	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
Bst4CI	ACNGT	2 cut(s)	193, 756
Bst6I	CTCTTC	2 cut(s)	708, 789
BstAUI	TGTACA	1 cut(s)	675
BstC8I	GCNNGC	1 cut(s)	146
BstDEI	CTNAG	1 cut(s)	234
BstF5I	GGATG	1 cut(s)	603
BstHHI	GCGC	1 cut(s)	704
BstKTI	GATC	6 cut(s)	172, 226, 346, 469, 568, 808
BstMAI	GTCTC	1 cut(s)	830
BstMBI	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	5 cut(s)	239, 659, 716, 768, 788
BstNSI	RCATGY	1 cut(s)	938
BstSCI	CCNGG	1 cut(s)	172
BstSFI	CTRYAG	1 cut(s)	533
BstV1I	GCAGC	2 cut(s)	430, 971
BstX2I	RGATCY	2 cut(s)	466, 805
BstYI	RGATCY	2 cut(s)	466, 805
BstZI	CGGCCG	1 cut(s)	175
BsuRI	GGCC	2 cut(s)	164, 177
BtgZI	GCGATG	1 cut(s)	30
BtsCI	GGATG	1 cut(s)	603
BtsIMutI	CAGTG	3 cut(s)	495, 752, 848
Cac8I	GCNNGC	1 cut(s)	146
CfoI	GCGC	1 cut(s)	704
Cfr10I	RCCGGY	1 cut(s)	144
Csp6I	GTAC	4 cut(s)	516, 676, 749, 757
CviAII	CATG	2 cut(s)	398, 935
CviQI	GTAC	4 cut(s)	516, 676, 749, 757
DdeI	CTNAG	1 cut(s)	234
DpnI	GATC	6 cut(s)	171, 225, 345, 468, 567, 807
DpnII	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
EaeI	YGGCCR	1 cut(s)	175
EagI	CGGCCG	1 cut(s)	175
Eam1104I	CTCTTC	2 cut(s)	708, 789
EarI	CTCTTC	2 cut(s)	708, 789
EciI	GGCGGA	1 cut(s)	113
EclXI	CGGCCG	1 cut(s)	175
Eco31I	GGTCTC	1 cut(s)	830
Eco52I	CGGCCG	1 cut(s)	175
FaeI	CATG	2 cut(s)	401, 938
FaqI	GGGAC	1 cut(s)	912
FatI	CATG	2 cut(s)	397, 934
FauI	CCCGC	2 cut(s)	210, 531
FbaI	TGATCA	2 cut(s)	223, 565
FblI	GTMKAC	1 cut(s)	638
Fnu4HI	GCNGC	2 cut(s)	444, 960
FokI	GGATG	1 cut(s)	610
Fsp4HI	GCNGC	2 cut(s)	444, 960
FspBI	CTAG	1 cut(s)	992
GlaI	GCGC	1 cut(s)	703
GluI	GCNGC	2 cut(s)	444, 960
GsuI	CTGGAG	2 cut(s)	894, 984
HaeIII	GGCC	2 cut(s)	164, 177
HapII	CCGG	2 cut(s)	145, 174
HhaI	GCGC	1 cut(s)	704
Hin1II	CATG	2 cut(s)	401, 938
Hin6I	GCGC	1 cut(s)	702
HinP1I	GCGC	1 cut(s)	702
HindIII	AAGCTT	1 cut(s)	918
HinfI	GANTC	4 cut(s)	185, 320, 818, 995
HpaII	CCGG	2 cut(s)	145, 174
HphI	GGTGA	3 cut(s)	278, 754, 971
Hpy166II	GTNNAC	3 cut(s)	545, 639, 678
Hpy188I	TCNGA	2 cut(s)	169, 294
Hpy188III	TCNNGA	3 cut(s)	182, 308, 992
Hpy8I	GTNNAC	3 cut(s)	545, 639, 678
HpyAV	CCTTC	6 cut(s)	40, 402, 433, 600, 860, 889
HpyCH4III	ACNGT	2 cut(s)	193, 756
HpyCH4V	TGCA	3 cut(s)	341, 432, 653
HpyF10VI	GCNNNNNNNGC	5 cut(s)	239, 659, 716, 768, 788
HpyF3I	CTNAG	1 cut(s)	234
Hsp92II	CATG	2 cut(s)	401, 938
HspAI	GCGC	1 cut(s)	702
KroI	GCCGGC	1 cut(s)	144
KroNI	GCCGGC	1 cut(s)	146
Ksp22I	TGATCA	2 cut(s)	223, 565
Kzo9I	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
LguI	GCTCTTC	1 cut(s)	789
LmnI	GCTCC	1 cut(s)	204
Lsp1109I	GCAGC	2 cut(s)	430, 971
LweI	GCATC	1 cut(s)	247
MaeI	CTAG	1 cut(s)	992
MaeIII	GTNAC	3 cut(s)	331, 764, 937
MalI	GATC	6 cut(s)	171, 225, 345, 468, 567, 807
MbiI	CCGCTC	1 cut(s)	199
MboI	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
MboII	GAAGA	4 cut(s)	25, 277, 725, 776
MfeI	CAATTG	2 cut(s)	336, 646
MflI	RGATCY	2 cut(s)	466, 805
MluCI	AATT	9 cut(s)	227, 281, 296, 336, 385, 549, 561, 646, 928
MlyI	GAGTC	2 cut(s)	179, 827
MroNI	GCCGGC	1 cut(s)	144
MroXI	GAANNNNTTC	1 cut(s)	284
MseI	TTAA	2 cut(s)	578, 948
MslI	CAYNNNNRTG	1 cut(s)	1003
MspA1I	CMGCKG	3 cut(s)	353, 538, 962
MspI	CCGG	2 cut(s)	145, 174
MspR9I	CCNGG	1 cut(s)	174
MunI	CAATTG	2 cut(s)	336, 646
MwoI	GCNNNNNNNGC	5 cut(s)	239, 659, 716, 768, 788
NaeI	GCCGGC	1 cut(s)	146
NciI	CCSGG	1 cut(s)	174
NdeII	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
NgoMIV	GCCGGC	1 cut(s)	144
NlaIII	CATG	2 cut(s)	401, 938
NlaIV	GGNNCC	1 cut(s)	15
NmuCI	GTSAC	3 cut(s)	331, 764, 937
NspI	RCATGY	1 cut(s)	938
PciI	ACATGT	1 cut(s)	934
PciSI	GCTCTTC	1 cut(s)	789
PdiI	GCCGGC	1 cut(s)	146
PdmI	GAANNNNTTC	1 cut(s)	284
PfeI	GAWTC	2 cut(s)	320, 995
PflMI	CCANNNNNTGG	2 cut(s)	476, 554
PkrI	GCNGC	2 cut(s)	445, 961
PleI	GAGTC	2 cut(s)	179, 826
PpsI	GAGTC	2 cut(s)	179, 826
PscI	ACATGT	1 cut(s)	934
PspN4I	GGNNCC	1 cut(s)	15
PsuI	RGATCY	2 cut(s)	466, 805
PvuII	CAGCTG	1 cut(s)	962
RsaI	GTAC	4 cut(s)	517, 677, 750, 758
RsaNI	GTAC	4 cut(s)	516, 676, 749, 757
RseI	CAYNNNNRTG	1 cut(s)	1003
SapI	GCTCTTC	1 cut(s)	789
SaqAI	TTAA	2 cut(s)	578, 948
SatI	GCNGC	2 cut(s)	444, 960
Sau3AI	GATC	6 cut(s)	169, 223, 343, 466, 565, 805
SchI	GAGTC	2 cut(s)	179, 827
ScrFI	CCNGG	1 cut(s)	174
SfaNI	GCATC	1 cut(s)	247
SfcI	CTRYAG	1 cut(s)	533
SmiMI	CAYNNNNRTG	1 cut(s)	1003
SmlI	CTYRAG	1 cut(s)	827
SmoI	CTYRAG	1 cut(s)	827
Sse9I	AATT	9 cut(s)	227, 281, 296, 336, 385, 549, 561, 646, 928
SsiI	CCGC	7 cut(s)	88, 124, 197, 203, 353, 446, 538
SspMI	CTAG	1 cut(s)	992
StyD4I	CCNGG	1 cut(s)	172
TaaI	ACNGT	2 cut(s)	193, 756
TaqI	TCGA	3 cut(s)	216, 309, 371
TasI	AATT	9 cut(s)	227, 281, 296, 336, 385, 549, 561, 646, 928
TatI	WGTACW	1 cut(s)	675
TfiI	GAWTC	2 cut(s)	320, 995
Tru1I	TTAA	2 cut(s)	578, 948
Tru9I	TTAA	2 cut(s)	578, 948
TscAI	CASTG	3 cut(s)	502, 759, 855
TseFI	GTSAC	3 cut(s)	331, 764, 937
TseI	GCWGC	2 cut(s)	443, 959
Tsp45I	GTSAC	3 cut(s)	331, 764, 937
TspDTI	ATGAA	1 cut(s)	987
TspGWI	ACGGA	1 cut(s)	278
TspRI	CASTG	3 cut(s)	502, 759, 855
Van91I	CCANNNNNTGG	2 cut(s)	476, 554
XapI	RAATTY	4 cut(s)	281, 296, 385, 928
XbaI	TCTAGA	1 cut(s)	991
XceI	RCATGY	1 cut(s)	938
XmiI	GTMKAC	1 cut(s)	638
XmnI	GAANNNNTTC	1 cut(s)	284
XspI	CTAG	1 cut(s)	992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.