Cytochrome c biogenesis protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49380 |
| fragaria_vesca | FvH4_2g07950 FvH4_2g07950 FvH4_2g07950 FvH4_2g07950 |
| malus_domestica | MD05G1072000.v1.1 MD10G1082600.v1.1 |
| prunus_persica | Prupe.8G105700_v2.0.a1 |
| pyrus_communis | pycom10g06510 |
| rosa_chinensis | RchiOBHm_Chr6g0262411 |
| rosa_laevigata | RLG00000014431 |
| rosa_multiflora | Rmu_ssc0000195.1_g000001 |
| rosa_roxburghii | Rroxscaffold_177G00434470 Rroxscaffold_7G00205300 |
| rosa_rugosa | Rorug05G0596800 Rorug05G0596900 Rorug05G0597000 |
| rosa_samantha | Rh6AG117800 Rh6BG111800 Rh6CG109800 Rh6DG099400 |
| rosa_wichuraiana | Rw6G010220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 287, 1228, 1418 |
| AccI | GTMKAC | 1 cut(s) | 46 |
| AciI | CCGC | 8 cut(s) | 168, 260, 272, 285, 294, 1223, 1455, 1639 |
| AclWI | GGATC | 1 cut(s) | 1154 |
| AcoI | YGGCCR | 2 cut(s) | 312, 1385 |
| AcsI | RAATTY | 8 cut(s) | 101, 123, 516, 704, 931, 1367, 1377, 1619 |
| AcuI | CTGAAG | 2 cut(s) | 200, 270 |
| AcyI | GRCGYC | 1 cut(s) | 288 |
| AfaI | GTAC | 3 cut(s) | 491, 843, 1191 |
| AfeI | AGCGCT | 1 cut(s) | 1182 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 463, 512, 649, 1612 |
| AflII | CTTAAG | 2 cut(s) | 1193, 1235 |
| AflIII | ACRYGT | 1 cut(s) | 558 |
| AgsI | TTSAA | 7 cut(s) | 94, 142, 737, 784, 901, 994, 1409 |
| AjiI | CACGTC | 1 cut(s) | 1009 |
| AjnI | CCWGG | 1 cut(s) | 1682 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 44, 76, 508, 540 |
| AluBI | AGCT | 6 cut(s) | 178, 308, 764, 897, 1258, 1399 |
| AluI | AGCT | 6 cut(s) | 178, 308, 764, 897, 1258, 1399 |
| Alw21I | GWGCWC | 1 cut(s) | 1513 |
| Alw26I | GTCTC | 3 cut(s) | 1242, 1548, 1680 |
| AlwI | GGATC | 1 cut(s) | 1154 |
| Ama87I | CYCGRG | 1 cut(s) | 1477 |
| Aor51HI | AGCGCT | 1 cut(s) | 1182 |
| AoxI | GGCC | 9 cut(s) | 69, 312, 465, 615, 687, 788, 955, 1385, 1560 |
| ApaI | GGGCCC | 1 cut(s) | 959 |
| ApeKI | GCWGC | 1 cut(s) | 856 |
| ApoI | RAATTY | 8 cut(s) | 101, 123, 516, 704, 931, 1367, 1377, 1619 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 894, 926 |
| AspLEI | GCGC | 3 cut(s) | 290, 887, 1183 |
| AspS9I | GGNCC | 8 cut(s) | 70, 466, 788, 955, 956, 1081, 1208, 1560 |
| AsuC2I | CCSGG | 4 cut(s) | 470, 892, 1478, 1479 |
| AsuHPI | GGTGA | 6 cut(s) | 154, 361, 473, 532, 1141, 1628 |
| AvaI | CYCGRG | 1 cut(s) | 1477 |
| AvaII | GGWCC | 2 cut(s) | 1081, 1208 |
| BaeGI | GKGCMC | 1 cut(s) | 959 |
| BanI | GGYRCC | 3 cut(s) | 287, 1228, 1418 |
| BanII | GRGCYC | 1 cut(s) | 959 |
| BbsI | GAAGAC | 2 cut(s) | 152, 188 |
| Bbv12I | GWGCWC | 1 cut(s) | 1513 |
| BbvI | GCAGC | 1 cut(s) | 843 |
| BccI | CCATC | 6 cut(s) | 525, 657, 698, 946, 1409, 1565 |
| BceAI | ACGGC | 1 cut(s) | 1400 |
| BciT130I | CCWGG | 1 cut(s) | 1684 |
| BclI | TGATCA | 1 cut(s) | 1354 |
| BcnI | CCSGG | 4 cut(s) | 470, 892, 1478, 1479 |
| BcoDI | GTCTC | 3 cut(s) | 1242, 1548, 1680 |
| BfaI | CTAG | 1 cut(s) | 1708 |
| BfoI | RGCGCY | 2 cut(s) | 291, 1184 |
| BfrI | CTTAAG | 2 cut(s) | 1193, 1235 |
| BisI | GCNGC | 3 cut(s) | 260, 286, 857 |
| BlsI | GCNGC | 3 cut(s) | 261, 287, 858 |
| BmcAI | AGTACT | 1 cut(s) | 1191 |
| Bme1390I | CCNGG | 5 cut(s) | 470, 892, 1478, 1479, 1684 |
| Bme18I | GGWCC | 2 cut(s) | 1081, 1208 |
| BmeT110I | CYCGRG | 1 cut(s) | 1477 |
| BmgBI | CACGTC | 1 cut(s) | 1009 |
| BmgT120I | GGNCC | 8 cut(s) | 70, 466, 788, 955, 956, 1081, 1208, 1560 |
| BmiI | GGNNCC | 9 cut(s) | 72, 289, 468, 789, 957, 1230, 1267, 1420, 1656 |
| BmrFI | CCNGG | 5 cut(s) | 470, 892, 1478, 1479, 1684 |
| BmsI | GCATC | 4 cut(s) | 614, 737, 1429, 1539 |
| BpiI | GAAGAC | 2 cut(s) | 152, 188 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1103 |
| BpuEI | CTTGAG | 3 cut(s) | 50, 174, 1106 |
| BpuMI | CCSGG | 4 cut(s) | 470, 892, 1478, 1479 |
| BsaHI | GRCGYC | 1 cut(s) | 288 |
| BsaJI | CCNNGG | 5 cut(s) | 457, 468, 544, 598, 1477 |
| BsaWI | WCCGGW | 1 cut(s) | 505 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1441, 1471, 1473, 1503 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 463, 512, 649, 1612 |
| Bse118I | RCCGGY | 2 cut(s) | 290, 1486 |
| Bse1I | ACTGG | 1 cut(s) | 1083 |
| Bse3DI | GCAATG | 2 cut(s) | 420, 858 |
| BseBI | CCWGG | 1 cut(s) | 1684 |
| BseDI | CCNNGG | 5 cut(s) | 457, 468, 544, 598, 1477 |
| BseGI | GGATG | 1 cut(s) | 566 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 463, 512, 649, 1612 |
| BseMI | GCAATG | 2 cut(s) | 420, 858 |
| BseMII | CTCAG | 2 cut(s) | 675, 975 |
| BseNI | ACTGG | 1 cut(s) | 1083 |
| BseRI | GAGGAG | 4 cut(s) | 68, 290, 587, 1643 |
| BseSI | GKGCMC | 1 cut(s) | 959 |
| BseXI | GCAGC | 1 cut(s) | 843 |
| BsgI | GTGCAG | 2 cut(s) | 70, 604 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1651 |
| BshFI | GGCC | 9 cut(s) | 71, 314, 467, 617, 689, 790, 957, 1387, 1562 |
| BshNI | GGYRCC | 3 cut(s) | 287, 1228, 1418 |
| BsiEI | CGRYCG | 1 cut(s) | 1651 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1513 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1477 |
| BsiSI | CCGG | 7 cut(s) | 291, 311, 470, 506, 891, 1478, 1487 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 463, 512, 649, 1612 |
| BsmAI | GTCTC | 3 cut(s) | 1242, 1548, 1680 |
| BsmBI | CGTCTC | 1 cut(s) | 1680 |
| BsnI | GGCC | 9 cut(s) | 71, 314, 467, 617, 689, 790, 957, 1387, 1562 |
| BsoBI | CYCGRG | 1 cut(s) | 1477 |
| Bsp120I | GGGCCC | 1 cut(s) | 955 |
| Bsp1286I | GDGCHC | 2 cut(s) | 959, 1513 |
| Bsp143I | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| BspACI | CCGC | 8 cut(s) | 168, 260, 272, 285, 294, 1223, 1455, 1639 |
| BspANI | GGCC | 9 cut(s) | 71, 314, 467, 617, 689, 790, 957, 1387, 1562 |
| BspCNI | CTCAG | 2 cut(s) | 676, 976 |
| BspLI | GGNNCC | 9 cut(s) | 72, 289, 468, 789, 957, 1230, 1267, 1420, 1656 |
| BspPI | GGATC | 1 cut(s) | 1154 |
| BspT107I | GGYRCC | 3 cut(s) | 287, 1228, 1418 |
| BspTI | CTTAAG | 2 cut(s) | 1193, 1235 |
| BsrDI | GCAATG | 2 cut(s) | 420, 858 |
| BsrFI | RCCGGY | 2 cut(s) | 290, 1486 |
| BsrI | ACTGG | 1 cut(s) | 1083 |
| BssAI | RCCGGY | 2 cut(s) | 290, 1486 |
| BssECI | CCNNGG | 5 cut(s) | 457, 468, 544, 598, 1477 |
| BssMI | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| BssNI | GRCGYC | 1 cut(s) | 288 |
| BssT1I | CCWWGG | 2 cut(s) | 457, 544 |
| Bst2UI | CCWGG | 1 cut(s) | 1684 |
| Bst4CI | ACNGT | 3 cut(s) | 910, 916, 1040 |
| Bst6I | CTCTTC | 1 cut(s) | 347 |
| BstACI | GRCGYC | 1 cut(s) | 288 |
| BstAFI | CTTAAG | 2 cut(s) | 1193, 1235 |
| BstC8I | GCNNGC | 3 cut(s) | 292, 619, 1323 |
| BstDEI | CTNAG | 5 cut(s) | 684, 881, 975, 984, 1103 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 647 |
| BstF5I | GGATG | 1 cut(s) | 566 |
| BstH2I | RGCGCY | 2 cut(s) | 291, 1184 |
| BstHHI | GCGC | 3 cut(s) | 290, 887, 1183 |
| BstKTI | GATC | 7 cut(s) | 1069, 1149, 1242, 1333, 1357, 1587, 1651 |
| BstMAI | GTCTC | 3 cut(s) | 1242, 1548, 1680 |
| BstMBI | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| BstMCI | CGRYCG | 1 cut(s) | 1651 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 291, 590, 1704 |
| BstNI | CCWGG | 1 cut(s) | 1684 |
| BstNSI | RCATGY | 1 cut(s) | 562 |
| BstSCI | CCNGG | 5 cut(s) | 468, 890, 1476, 1477, 1682 |
| BstSLI | GKGCMC | 1 cut(s) | 959 |
| BstV1I | GCAGC | 1 cut(s) | 843 |
| BstV2I | GAAGAC | 2 cut(s) | 152, 188 |
| BsuRI | GGCC | 9 cut(s) | 71, 314, 467, 617, 689, 790, 957, 1387, 1562 |
| BtrI | CACGTC | 1 cut(s) | 1009 |
| BtsCI | GGATG | 1 cut(s) | 566 |
| BtsI | GCAGTG | 1 cut(s) | 1587 |
| BtsIMutI | CAGTG | 4 cut(s) | 1045, 1062, 1123, 1587 |
| Cac8I | GCNNGC | 3 cut(s) | 292, 619, 1323 |
| CfoI | GCGC | 3 cut(s) | 290, 887, 1183 |
| Cfr10I | RCCGGY | 2 cut(s) | 290, 1486 |
| Cfr13I | GGNCC | 8 cut(s) | 70, 466, 788, 955, 956, 1081, 1208, 1560 |
| Cfr9I | CCCGGG | 1 cut(s) | 1477 |
| Csp6I | GTAC | 3 cut(s) | 490, 842, 1190 |
| CviAII | CATG | 3 cut(s) | 42, 559, 1024 |
| CviQI | GTAC | 3 cut(s) | 490, 842, 1190 |
| DdeI | CTNAG | 5 cut(s) | 684, 881, 975, 984, 1103 |
| DinI | GGCGCC | 1 cut(s) | 289 |
| DpnI | GATC | 7 cut(s) | 1068, 1148, 1241, 1332, 1356, 1586, 1650 |
| DpnII | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| DraI | TTTAAA | 1 cut(s) | 930 |
| EaeI | YGGCCR | 2 cut(s) | 312, 1385 |
| Eam1104I | CTCTTC | 1 cut(s) | 347 |
| EarI | CTCTTC | 1 cut(s) | 347 |
| EciI | GGCGGA | 2 cut(s) | 287, 309 |
| Eco130I | CCWWGG | 2 cut(s) | 457, 544 |
| Eco24I | GRGCYC | 1 cut(s) | 959 |
| Eco47I | GGWCC | 2 cut(s) | 1081, 1208 |
| Eco47III | AGCGCT | 1 cut(s) | 1182 |
| Eco57I | CTGAAG | 2 cut(s) | 200, 270 |
| Eco88I | CYCGRG | 1 cut(s) | 1477 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 647 |
| EcoO109I | RGGNCCY | 4 cut(s) | 70, 466, 788, 1208 |
| EcoRI | GAATTC | 1 cut(s) | 1377 |
| EcoRII | CCWGG | 1 cut(s) | 1682 |
| EcoT14I | CCWWGG | 2 cut(s) | 457, 544 |
| EcoT38I | GRGCYC | 1 cut(s) | 959 |
| EgeI | GGCGCC | 1 cut(s) | 289 |
| EheI | GGCGCC | 1 cut(s) | 289 |
| ErhI | CCWWGG | 2 cut(s) | 457, 544 |
| Esp3I | CGTCTC | 1 cut(s) | 1680 |
| FaeI | CATG | 3 cut(s) | 45, 562, 1027 |
| FatI | CATG | 3 cut(s) | 41, 558, 1023 |
| FbaI | TGATCA | 1 cut(s) | 1354 |
| FblI | GTMKAC | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 3 cut(s) | 260, 286, 857 |
| FokI | GGATG | 1 cut(s) | 553 |
| FriOI | GRGCYC | 1 cut(s) | 959 |
| Fsp4HI | GCNGC | 3 cut(s) | 260, 286, 857 |
| FspBI | CTAG | 1 cut(s) | 1708 |
| GlaI | GCGC | 3 cut(s) | 289, 886, 1182 |
| GluI | GCNGC | 3 cut(s) | 260, 286, 857 |
| HaeII | RGCGCY | 2 cut(s) | 291, 1184 |
| HaeIII | GGCC | 9 cut(s) | 71, 314, 467, 617, 689, 790, 957, 1387, 1562 |
| HapII | CCGG | 7 cut(s) | 291, 311, 470, 506, 891, 1478, 1487 |
| HhaI | GCGC | 3 cut(s) | 290, 887, 1183 |
| Hin1I | GRCGYC | 1 cut(s) | 288 |
| Hin1II | CATG | 3 cut(s) | 45, 562, 1027 |
| Hin6I | GCGC | 3 cut(s) | 288, 885, 1181 |
| HinP1I | GCGC | 3 cut(s) | 288, 885, 1181 |
| HincII | GTYRAC | 2 cut(s) | 1012, 1669 |
| HindII | GTYRAC | 2 cut(s) | 1012, 1669 |
| HindIII | AAGCTT | 2 cut(s) | 1256, 1397 |
| HinfI | GANTC | 2 cut(s) | 713, 1017 |
| HpaI | GTTAAC | 1 cut(s) | 1669 |
| HpaII | CCGG | 7 cut(s) | 291, 311, 470, 506, 891, 1478, 1487 |
| HphI | GGTGA | 6 cut(s) | 154, 361, 473, 532, 1141, 1628 |
| Hpy166II | GTNNAC | 5 cut(s) | 47, 564, 1006, 1012, 1669 |
| Hpy188I | TCNGA | 5 cut(s) | 250, 602, 685, 712, 1693 |
| Hpy188III | TCNNGA | 9 cut(s) | 142, 191, 737, 781, 1298, 1358, 1460, 1625, 1658 |
| Hpy8I | GTNNAC | 5 cut(s) | 47, 564, 1006, 1012, 1669 |
| Hpy99I | CGWCG | 1 cut(s) | 1386 |
| HpyAV | CCTTC | 9 cut(s) | 100, 245, 360, 778, 801, 1199, 1279, 1355, 1606 |
| HpyCH4III | ACNGT | 3 cut(s) | 910, 916, 1040 |
| HpyCH4IV | ACGT | 2 cut(s) | 133, 1008 |
| HpyCH4V | TGCA | 7 cut(s) | 87, 584, 621, 656, 676, 1442, 1530 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 291, 590, 1704 |
| HpyF3I | CTNAG | 5 cut(s) | 684, 881, 975, 984, 1103 |
| HpySE526I | ACGT | 2 cut(s) | 133, 1008 |
| Hsp92I | GRCGYC | 1 cut(s) | 288 |
| Hsp92II | CATG | 3 cut(s) | 45, 562, 1027 |
| HspAI | GCGC | 3 cut(s) | 288, 885, 1181 |
| KasI | GGCGCC | 1 cut(s) | 287 |
| KroI | GCCGGC | 1 cut(s) | 290 |
| KroNI | GCCGGC | 1 cut(s) | 292 |
| Ksp22I | TGATCA | 1 cut(s) | 1354 |
| KspAI | GTTAAC | 1 cut(s) | 1669 |
| Kzo9I | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| LmnI | GCTCC | 4 cut(s) | 313, 602, 761, 894 |
| Lsp1109I | GCAGC | 1 cut(s) | 843 |
| LweI | GCATC | 4 cut(s) | 614, 737, 1429, 1539 |
| MaeI | CTAG | 1 cut(s) | 1708 |
| MaeII | ACGT | 2 cut(s) | 133, 1008 |
| MaeIII | GTNAC | 1 cut(s) | 910 |
| MalI | GATC | 7 cut(s) | 1068, 1148, 1241, 1332, 1356, 1586, 1650 |
| MboI | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| MboII | GAAGA | 6 cut(s) | 157, 193, 214, 364, 672, 672 |
| MfeI | CAATTG | 4 cut(s) | 115, 1341, 1404, 1443 |
| MhlI | GDGCHC | 2 cut(s) | 959, 1513 |
| Mly113I | GGCGCC | 1 cut(s) | 288 |
| MlyI | GAGTC | 1 cut(s) | 722 |
| MmeI | TCCRAC | 1 cut(s) | 1261 |
| MreI | CGCCGGCG | 1 cut(s) | 290 |
| MroNI | GCCGGC | 1 cut(s) | 290 |
| MseI | TTAA | 9 cut(s) | 929, 1133, 1194, 1215, 1236, 1290, 1305, 1466, 1668 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1555 |
| MspCI | CTTAAG | 2 cut(s) | 1193, 1235 |
| MspI | CCGG | 7 cut(s) | 291, 311, 470, 506, 891, 1478, 1487 |
| MspR9I | CCNGG | 5 cut(s) | 470, 892, 1478, 1479, 1684 |
| MunI | CAATTG | 4 cut(s) | 115, 1341, 1404, 1443 |
| MvaI | CCWGG | 1 cut(s) | 1684 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 291, 590, 1704 |
| NaeI | GCCGGC | 1 cut(s) | 292 |
| NarI | GGCGCC | 1 cut(s) | 288 |
| NciI | CCSGG | 4 cut(s) | 470, 892, 1478, 1479 |
| NdeII | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| NgoMIV | GCCGGC | 1 cut(s) | 290 |
| NlaIII | CATG | 3 cut(s) | 45, 562, 1027 |
| NlaIV | GGNNCC | 9 cut(s) | 72, 289, 468, 789, 957, 1230, 1267, 1420, 1656 |
| NmuCI | GTSAC | 1 cut(s) | 910 |
| NspI | RCATGY | 1 cut(s) | 562 |
| PciI | ACATGT | 1 cut(s) | 558 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1041 |
| PdiI | GCCGGC | 1 cut(s) | 292 |
| PfeI | GAWTC | 1 cut(s) | 1017 |
| PkrI | GCNGC | 3 cut(s) | 261, 287, 858 |
| Ple19I | CGATCG | 1 cut(s) | 1651 |
| PleI | GAGTC | 1 cut(s) | 721 |
| PluTI | GGCGCC | 1 cut(s) | 291 |
| PpsI | GAGTC | 1 cut(s) | 721 |
| PpuMI | RGGWCCY | 1 cut(s) | 1208 |
| PscI | ACATGT | 1 cut(s) | 558 |
| Psp5II | RGGWCCY | 1 cut(s) | 1208 |
| Psp6I | CCWGG | 1 cut(s) | 1682 |
| PspGI | CCWGG | 1 cut(s) | 1682 |
| PspN4I | GGNNCC | 9 cut(s) | 72, 289, 468, 789, 957, 1230, 1267, 1420, 1656 |
| PspOMI | GGGCCC | 1 cut(s) | 955 |
| PspPI | GGNCC | 8 cut(s) | 70, 466, 788, 955, 956, 1081, 1208, 1560 |
| PspPPI | RGGWCCY | 1 cut(s) | 1208 |
| PvuI | CGATCG | 1 cut(s) | 1651 |
| RsaI | GTAC | 3 cut(s) | 491, 843, 1191 |
| RsaNI | GTAC | 3 cut(s) | 490, 842, 1190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1555 |
| SaqAI | TTAA | 9 cut(s) | 929, 1133, 1194, 1215, 1236, 1290, 1305, 1466, 1668 |
| SatI | GCNGC | 3 cut(s) | 260, 286, 857 |
| Sau3AI | GATC | 7 cut(s) | 1066, 1146, 1239, 1330, 1354, 1584, 1648 |
| Sau96I | GGNCC | 8 cut(s) | 70, 466, 788, 955, 956, 1081, 1208, 1560 |
| ScaI | AGTACT | 1 cut(s) | 1191 |
| SchI | GAGTC | 1 cut(s) | 722 |
| ScrFI | CCNGG | 5 cut(s) | 470, 892, 1478, 1479, 1684 |
| SduI | GDGCHC | 2 cut(s) | 959, 1513 |
| SfaNI | GCATC | 4 cut(s) | 614, 737, 1429, 1539 |
| SfoI | GGCGCC | 1 cut(s) | 289 |
| SgrAI | CRCCGGYG | 1 cut(s) | 290 |
| SinI | GGWCC | 2 cut(s) | 1081, 1208 |
| SmaI | CCCGGG | 1 cut(s) | 1479 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1555 |
| SmlI | CTYRAG | 5 cut(s) | 65, 189, 1085, 1193, 1235 |
| SmoI | CTYRAG | 5 cut(s) | 65, 189, 1085, 1193, 1235 |
| SsiI | CCGC | 8 cut(s) | 168, 260, 272, 285, 294, 1223, 1455, 1639 |
| SspDI | GGCGCC | 1 cut(s) | 287 |
| SspMI | CTAG | 1 cut(s) | 1708 |
| StyD4I | CCNGG | 5 cut(s) | 468, 890, 1476, 1477, 1682 |
| StyI | CCWWGG | 2 cut(s) | 457, 544 |
| TaaI | ACNGT | 3 cut(s) | 910, 916, 1040 |
| TaiI | ACGT | 2 cut(s) | 136, 1011 |
| TaqI | TCGA | 3 cut(s) | 483, 1381, 1647 |
| TatI | WGTACW | 2 cut(s) | 841, 1189 |
| TauI | GCSGC | 2 cut(s) | 262, 288 |
| TfiI | GAWTC | 1 cut(s) | 1017 |
| Tru1I | TTAA | 9 cut(s) | 929, 1133, 1194, 1215, 1236, 1290, 1305, 1466, 1668 |
| Tru9I | TTAA | 9 cut(s) | 929, 1133, 1194, 1215, 1236, 1290, 1305, 1466, 1668 |
| TscAI | CASTG | 4 cut(s) | 1045, 1069, 1123, 1587 |
| TseFI | GTSAC | 1 cut(s) | 910 |
| TseI | GCWGC | 1 cut(s) | 856 |
| Tsp45I | GTSAC | 1 cut(s) | 910 |
| TspDTI | ATGAA | 4 cut(s) | 126, 439, 1218, 1649 |
| TspGWI | ACGGA | 1 cut(s) | 255 |
| TspMI | CCCGGG | 1 cut(s) | 1477 |
| TspRI | CASTG | 4 cut(s) | 1045, 1069, 1123, 1587 |
| Vha464I | CTTAAG | 2 cut(s) | 1193, 1235 |
| VpaK11BI | GGWCC | 2 cut(s) | 1081, 1208 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 647 |
| XapI | RAATTY | 8 cut(s) | 101, 123, 516, 704, 931, 1367, 1377, 1619 |
| XceI | RCATGY | 1 cut(s) | 562 |
| XmaI | CCCGGG | 1 cut(s) | 1477 |
| XmiI | GTMKAC | 1 cut(s) | 46 |
| XspI | CTAG | 1 cut(s) | 1708 |
| ZrmI | AGTACT | 1 cut(s) | 1191 |