pycom10g06510

Cytochrome c biogenesis protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
7585159 .. 7588344
3186 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06510.7

Sequence Viewer

Length: 1713 bp
ATGGAGTTTTTAAACCCCACCACAGTCCCCAAATCATGTCTACCCAGAACGCATTTCCTCAAAGCCCCTCTCCTCCACTGCCCCTTCAAACTCACCGCATTCTCTCCCCACACTTCCCAAATTCATAGACATTCCTTCCGGCAACCACCTCTCTCCCTCTCAGTTACCACCACTTGTGGGCTGAAGACCCCTCAAGACAGCAAGAAGAGCAAGAACAAAAGCAACAACATAACTAAGCAAATTATACTCTCCGAAGGTGGGCCACCGCCTCTGGTGGAGAAGAGTGGCGACGCCGCCGGAGGCGAGGAAGCTCCGGTGAAGTCAGGGGGTGGGACTGGGGTGATGGGTTTGGTGAAAAGGTTTCCTAGAAGGGTTCTTTCGGTTCTGTCTTATCTGCCTTTGGCTATTGGAGAAATGTTTGCCATTGCTGGTCTTATGGCTCTGGTGATCGATCCGTTAAAAGGTGAGGCCCCGGATTTCTATTTCGATAAATACCCTGAAAGCAATCCAGTGTTGGGAATTTTCACTTGGAGATGGGTTCTCACCCTTGGGTTTGACCACATGTTCACTTCCCCCATTTTCCTTTCACTATTGGCTCTCCTCGGTGCATCACTAATGGCCTGCACTTACACTACGCAAATACCCCTGGTCAAGGTTGCGAGAAGATGGAACTTTATGCAATCTTCTGAGGCCATCCACAAGCAGGGATTTTCGGACTCTTTGCCAAGAGCATCAGTTCAAGATTTGGGCGTTGTCCTTATGGGAGCTGGATATGAGGTATTCTTGAAGGGGCCTTCTTTATATGCTTTCAAGGGGCTGGCTGGTCGGTTTGCCCCTATTGGAGTACATCTAGCAATGCTGCTAATAATGGTAGGTGGAACTCTTAGTGCAAGCGGGAGCTTCAAAGGAACAGTCATGGTTCCTCAGGGTTTGAATTTTGTTATAGGAGATGTGATGCGCCCAATTGGGTTTCTCTCTACTCCAACTGAGTCTTTTAATACAGAGGTTCATGTCAACAAATTCTACATGAACTACTATGACAGTGGTGAGGTATCACAGTTTTACACTGATCTTTCACTATTGGACCTTGACGGCAAGGAGGTGCTAAGGAAAACAATAAGTGTAAATAACCCTTTAAGGTATGGAGGGATCACGATTTACCAGACAGATTGGAGTATTTCAGCACTTCAAGTACTCAAGGATAACGAAGGACCTTTCAATTTGGCGATGGCACCTCTTAAGATAAATGGAGACAAGAAGCTTTATGGGTCCTTCTTACCCATTGGCGATGTTAATGCTCCTAATGTCAAGGGAATATCAATGCTTGCTCGGGATCTACAATCAATTGTCCTGTATGATCAAGAAGGAAAATTTGCTGGAGTCCGACGACCAAGTTCCAAGCTTCCAATTGAAATTGATGGCAACAAAATTGTTATTGTAGATGCAATTGGGAGTAGTGGTCTTGACTTGAAGACTGACCCAGGAGTGCCTGTTGTATATGCTGGATTTGGTGCTCTAATGCTTACTACTTGCATCAGTTTTCTTTCTCATTCACAGATTTGGGCCTTACAAGATGGAACAGCAGTGATCGTAGGAGGAAAAACTAACCGTGCAAAGGGAGAATTTCCAGAGGAGATGAACCGTTTGATTGATCGGGTTCCAGAACTAGTTGACGCATCTCTTTCCAGGCAATCAGATAGCACTGTTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

571

Amino Acids

61.83

Weight (kDa)

8.83

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1231
AccI GTMKAC 1 cut(s) 40
AciI CCGC 4 cut(s) 96, 266, 294, 894
AclWI GGATC 3 cut(s) 446, 1157, 1341
AcsI RAATTY 6 cut(s) 120, 519, 934, 1019, 1370, 1622
AcuI CTGAAG 1 cut(s) 203
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 2 cut(s) 846, 1194
AfiI CCNNNNNNNGG 7 cut(s) 177, 258, 461, 515, 652, 703, 1615
AflII CTTAAG 1 cut(s) 1238
AflIII ACRYGT 1 cut(s) 561
AhlI ACTAGT 1 cut(s) 1666
AjnI CCWGG 3 cut(s) 645, 1480, 1685
AjuI GAANNNNNNNTTGG 2 cut(s) 511, 543
AluBI AGCT 5 cut(s) 311, 767, 900, 1261, 1402
AluI AGCT 5 cut(s) 311, 767, 900, 1261, 1402
Alw21I GWGCWC 1 cut(s) 1516
Alw26I GTCTC 1 cut(s) 1245
AlwI GGATC 3 cut(s) 446, 1157, 1341
Ama87I CYCGRG 1 cut(s) 1329
AoxI GGCC 6 cut(s) 260, 468, 618, 690, 791, 1563
ApeKI GCWGC 1 cut(s) 859
ApoI RAATTY 6 cut(s) 120, 519, 934, 1019, 1370, 1622
ArsI GACNNNNNNTTYG 2 cut(s) 897, 929
AspLEI GCGC 1 cut(s) 960
AspS9I GGNCC 7 cut(s) 260, 469, 791, 1084, 1211, 1269, 1563
AsuC2I CCSGG 1 cut(s) 473
AsuHPI GGTGA 8 cut(s) 85, 328, 352, 364, 457, 476, 535, 1058
AvaI CYCGRG 1 cut(s) 1329
AvaII GGWCC 3 cut(s) 1084, 1211, 1269
AxyI CCTNAGG 1 cut(s) 924
BanI GGYRCC 1 cut(s) 1231
BbsI GAAGAC 2 cut(s) 191, 1478
Bbv12I GWGCWC 1 cut(s) 1516
BbvI GCAGC 1 cut(s) 846
BccI CCATC 7 cut(s) 337, 528, 660, 701, 1222, 1412, 1568
BceAI ACGGC 1 cut(s) 1108
BcgI CGANNNNNNTGC 2 cut(s) 1277, 1311
BciT130I CCWGG 3 cut(s) 647, 1482, 1687
BclI TGATCA 1 cut(s) 1357
BcnI CCSGG 1 cut(s) 473
BcoDI GTCTC 1 cut(s) 1245
BcuI ACTAGT 1 cut(s) 1666
BfaI CTAG 4 cut(s) 366, 851, 1667, 1711
BfrI CTTAAG 1 cut(s) 1238
BisI GCNGC 2 cut(s) 294, 860
BlsI GCNGC 2 cut(s) 295, 861
BmcAI AGTACT 1 cut(s) 1194
Bme1390I CCNGG 4 cut(s) 473, 647, 1482, 1687
Bme18I GGWCC 3 cut(s) 1084, 1211, 1269
BmeT110I CYCGRG 1 cut(s) 1329
BmgT120I GGNCC 7 cut(s) 260, 469, 791, 1084, 1211, 1269, 1563
BmiI GGNNCC 6 cut(s) 471, 792, 921, 1233, 1270, 1659
BmrFI CCNGG 4 cut(s) 473, 647, 1482, 1687
BmrI ACTGGG 1 cut(s) 345
BmsI GCATC 6 cut(s) 617, 740, 945, 1432, 1542, 1685
BmuI ACTGGG 1 cut(s) 345
BpiI GAAGAC 2 cut(s) 191, 1478
BpmI CTGGAG 1 cut(s) 1398
Bpu10I CCTNAGC 1 cut(s) 1106
BpuEI CTTGAG 2 cut(s) 177, 1181
BpuMI CCSGG 1 cut(s) 473
Bsa29I ATCGAT 1 cut(s) 450
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 5 cut(s) 471, 547, 601, 645, 1480
BsaWI WCCGGW 1 cut(s) 313
BsaXI ACNNNNNCTCC 4 cut(s) 1444, 1474, 1476, 1506
Bsc4I CCNNNNNNNGG 7 cut(s) 177, 258, 461, 515, 652, 703, 1615
Bse1I ACTGG 2 cut(s) 340, 509
Bse21I CCTNAGG 1 cut(s) 924
Bse3DI GCAATG 2 cut(s) 423, 861
BseBI CCWGG 3 cut(s) 647, 1482, 1687
BseCI ATCGAT 1 cut(s) 450
BseDI CCNNGG 5 cut(s) 471, 547, 601, 645, 1480
BseGI GGATG 1 cut(s) 693
BseLI CCNNNNNNNGG 7 cut(s) 177, 258, 461, 515, 652, 703, 1615
BseMI GCAATG 2 cut(s) 423, 861
BseMII CTCAG 4 cut(s) 174, 678, 938, 978
BseNI ACTGG 2 cut(s) 340, 509
BseRI GAGGAG 3 cut(s) 62, 590, 1646
BseXI GCAGC 1 cut(s) 846
BsgI GTGCAG 1 cut(s) 607
BshFI GGCC 6 cut(s) 262, 470, 620, 692, 793, 1565
BshNI GGYRCC 1 cut(s) 1231
BshVI ATCGAT 1 cut(s) 450
BsiHKAI GWGCWC 1 cut(s) 1516
BsiHKCI CYCGRG 1 cut(s) 1329
BsiSI CCGG 4 cut(s) 139, 297, 314, 473
BslFI GGGAC 2 cut(s) 11, 346
BslI CCNNNNNNNGG 7 cut(s) 177, 258, 461, 515, 652, 703, 1615
BsmAI GTCTC 1 cut(s) 1245
BsmFI GGGAC 2 cut(s) 11, 346
BsmI GAATGC 1 cut(s) 98
BsnI GGCC 6 cut(s) 262, 470, 620, 692, 793, 1565
BsoBI CYCGRG 1 cut(s) 1329
Bsp1286I GDGCHC 1 cut(s) 1516
Bsp143I GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
BspACI CCGC 4 cut(s) 96, 266, 294, 894
BspANI GGCC 6 cut(s) 262, 470, 620, 692, 793, 1565
BspCNI CTCAG 4 cut(s) 173, 679, 937, 979
BspDI ATCGAT 1 cut(s) 450
BspLI GGNNCC 6 cut(s) 471, 792, 921, 1233, 1270, 1659
BspPI GGATC 3 cut(s) 446, 1157, 1341
BspQI GCTCTTC 1 cut(s) 200
BspT107I GGYRCC 1 cut(s) 1231
BspTI CTTAAG 1 cut(s) 1238
BsrDI GCAATG 2 cut(s) 423, 861
BsrI ACTGG 2 cut(s) 340, 509
BssECI CCNNGG 5 cut(s) 471, 547, 601, 645, 1480
BssMI GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 1 cut(s) 547
Bst2UI CCWGG 3 cut(s) 647, 1482, 1687
Bst4CI ACNGT 7 cut(s) 25, 913, 1043, 1059, 1610, 1643, 1705
Bst6I CTCTTC 2 cut(s) 200, 275
BstACI GRCGYC 1 cut(s) 291
BstAFI CTTAAG 1 cut(s) 1238
BstC8I GCNNGC 4 cut(s) 622, 819, 892, 1326
BstDEI CTNAG 7 cut(s) 160, 234, 687, 884, 924, 987, 1106
BstENI CCTNNNNNAGG 1 cut(s) 650
BstF5I GGATG 1 cut(s) 693
BstHHI GCGC 1 cut(s) 960
BstKTI GATC 8 cut(s) 450, 454, 1072, 1152, 1336, 1360, 1590, 1654
BstMAI GTCTC 1 cut(s) 1245
BstMBI GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
BstMWI GCNNNNNNNGC 2 cut(s) 207, 1707
BstNI CCWGG 3 cut(s) 647, 1482, 1687
BstNSI RCATGY 1 cut(s) 565
BstSCI CCNGG 4 cut(s) 471, 645, 1480, 1685
BstV1I GCAGC 1 cut(s) 846
BstV2I GAAGAC 2 cut(s) 191, 1478
BstX2I RGATCY 1 cut(s) 1333
BstYI RGATCY 1 cut(s) 1333
Bsu15I ATCGAT 1 cut(s) 450
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 6 cut(s) 262, 470, 620, 692, 793, 1565
BsuTUI ATCGAT 1 cut(s) 450
BtgZI GCGATG 2 cut(s) 1241, 1302
BtsCI GGATG 1 cut(s) 693
BtsI GCAGTG 2 cut(s) 76, 1590
BtsIMutI CAGTG 6 cut(s) 76, 516, 1048, 1065, 1590, 1701
Cac8I GCNNGC 4 cut(s) 622, 819, 892, 1326
CfoI GCGC 1 cut(s) 960
Cfr13I GGNCC 7 cut(s) 260, 469, 791, 1084, 1211, 1269, 1563
ClaI ATCGAT 1 cut(s) 450
CseI GACGC 2 cut(s) 299, 1682
Csp6I GTAC 2 cut(s) 845, 1193
CviAII CATG 5 cut(s) 36, 562, 916, 1010, 1027
CviQI GTAC 2 cut(s) 845, 1193
DdeI CTNAG 7 cut(s) 160, 234, 687, 884, 924, 987, 1106
DpnI GATC 8 cut(s) 449, 453, 1071, 1151, 1335, 1359, 1589, 1653
DpnII GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
DraI TTTAAA 1 cut(s) 12
Eam1104I CTCTTC 2 cut(s) 200, 275
EarI CTCTTC 2 cut(s) 200, 275
Eco130I CCWWGG 1 cut(s) 547
Eco47I GGWCC 3 cut(s) 1084, 1211, 1269
Eco57I CTGAAG 1 cut(s) 203
Eco81I CCTNAGG 1 cut(s) 924
Eco88I CYCGRG 1 cut(s) 1329
EcoNI CCTNNNNNAGG 1 cut(s) 650
EcoO109I RGGNCCY 4 cut(s) 469, 791, 1211, 1269
EcoRII CCWGG 3 cut(s) 645, 1480, 1685
EcoT14I CCWWGG 1 cut(s) 547
ErhI CCWWGG 1 cut(s) 547
FaeI CATG 5 cut(s) 39, 565, 919, 1013, 1030
FaqI GGGAC 2 cut(s) 11, 346
FatI CATG 5 cut(s) 35, 561, 915, 1009, 1026
FauI CCCGC 1 cut(s) 887
FbaI TGATCA 1 cut(s) 1357
FblI GTMKAC 1 cut(s) 40
Fnu4HI GCNGC 2 cut(s) 294, 860
FokI GGATG 1 cut(s) 680
Fsp4HI GCNGC 2 cut(s) 294, 860
FspBI CTAG 4 cut(s) 366, 851, 1667, 1711
GlaI GCGC 1 cut(s) 959
GluI GCNGC 2 cut(s) 294, 860
GsuI CTGGAG 1 cut(s) 1398
HaeIII GGCC 6 cut(s) 262, 470, 620, 692, 793, 1565
HapII CCGG 4 cut(s) 139, 297, 314, 473
HgaI GACGC 2 cut(s) 299, 1682
HhaI GCGC 1 cut(s) 960
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 5 cut(s) 39, 565, 919, 1013, 1030
Hin6I GCGC 1 cut(s) 958
HinP1I GCGC 1 cut(s) 958
HincII GTYRAC 2 cut(s) 1015, 1672
HindII GTYRAC 2 cut(s) 1015, 1672
HindIII AAGCTT 2 cut(s) 1259, 1400
HinfI GANTC 3 cut(s) 716, 989, 1380
HpaII CCGG 4 cut(s) 139, 297, 314, 473
HphI GGTGA 8 cut(s) 85, 328, 352, 364, 457, 476, 535, 1058
Hpy166II GTNNAC 4 cut(s) 41, 567, 1015, 1672
Hpy188I TCNGA 5 cut(s) 253, 688, 715, 1385, 1696
Hpy188III TCNNGA 9 cut(s) 194, 740, 784, 1153, 1331, 1361, 1463, 1628, 1661
Hpy8I GTNNAC 4 cut(s) 41, 567, 1015, 1672
Hpy99I CGWCG 2 cut(s) 293, 1389
HpyAV CCTTC 9 cut(s) 94, 145, 248, 363, 781, 804, 1202, 1282, 1358
HpyCH4III ACNGT 7 cut(s) 25, 913, 1043, 1059, 1610, 1643, 1705
HpyCH4V TGCA 7 cut(s) 608, 624, 679, 890, 1445, 1533, 1613
HpyF10VI GCNNNNNNNGC 2 cut(s) 207, 1707
HpyF3I CTNAG 7 cut(s) 160, 234, 687, 884, 924, 987, 1106
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 5 cut(s) 39, 565, 919, 1013, 1030
HspAI GCGC 1 cut(s) 958
Ksp22I TGATCA 1 cut(s) 1357
Kzo9I GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
LguI GCTCTTC 1 cut(s) 200
LmnI GCTCC 4 cut(s) 316, 764, 897, 1303
Lsp1109I GCAGC 1 cut(s) 846
LweI GCATC 6 cut(s) 617, 740, 945, 1432, 1542, 1685
MaeI CTAG 4 cut(s) 366, 851, 1667, 1711
MaeIII GTNAC 1 cut(s) 163
MalI GATC 8 cut(s) 449, 453, 1071, 1151, 1335, 1359, 1589, 1653
MboI GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
MboII GAAGA 6 cut(s) 196, 217, 292, 675, 675, 1483
MfeI CAATTG 4 cut(s) 963, 1344, 1407, 1446
MflI RGATCY 1 cut(s) 1333
MhlI GDGCHC 1 cut(s) 1516
MlyI GAGTC 3 cut(s) 710, 998, 1389
MmeI TCCRAC 2 cut(s) 1007, 1408
MseI TTAA 6 cut(s) 11, 458, 996, 1136, 1239, 1293
MspCI CTTAAG 1 cut(s) 1238
MspI CCGG 4 cut(s) 139, 297, 314, 473
MspR9I CCNGG 4 cut(s) 473, 647, 1482, 1687
MunI CAATTG 4 cut(s) 963, 1344, 1407, 1446
Mva1269I GAATGC 1 cut(s) 98
MvaI CCWGG 3 cut(s) 647, 1482, 1687
MwoI GCNNNNNNNGC 2 cut(s) 207, 1707
NciI CCSGG 1 cut(s) 473
NdeII GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
NlaIII CATG 5 cut(s) 39, 565, 919, 1013, 1030
NlaIV GGNNCC 6 cut(s) 471, 792, 921, 1233, 1270, 1659
NspI RCATGY 1 cut(s) 565
PciI ACATGT 1 cut(s) 561
PciSI GCTCTTC 1 cut(s) 200
PctI GAATGC 1 cut(s) 98
PkrI GCNGC 2 cut(s) 295, 861
PleI GAGTC 3 cut(s) 710, 997, 1388
PpsI GAGTC 3 cut(s) 710, 997, 1388
PpuMI RGGWCCY 2 cut(s) 1211, 1269
PscI ACATGT 1 cut(s) 561
Psp5II RGGWCCY 2 cut(s) 1211, 1269
Psp6I CCWGG 3 cut(s) 645, 1480, 1685
PspGI CCWGG 3 cut(s) 645, 1480, 1685
PspN4I GGNNCC 6 cut(s) 471, 792, 921, 1233, 1270, 1659
PspPI GGNCC 7 cut(s) 260, 469, 791, 1084, 1211, 1269, 1563
PspPPI RGGWCCY 2 cut(s) 1211, 1269
PsuI RGATCY 1 cut(s) 1333
RsaI GTAC 2 cut(s) 846, 1194
RsaNI GTAC 2 cut(s) 845, 1193
SapI GCTCTTC 1 cut(s) 200
SaqAI TTAA 6 cut(s) 11, 458, 996, 1136, 1239, 1293
SatI GCNGC 2 cut(s) 294, 860
Sau3AI GATC 8 cut(s) 447, 451, 1069, 1149, 1333, 1357, 1587, 1651
Sau96I GGNCC 7 cut(s) 260, 469, 791, 1084, 1211, 1269, 1563
ScaI AGTACT 1 cut(s) 1194
SchI GAGTC 3 cut(s) 710, 998, 1389
ScrFI CCNGG 4 cut(s) 473, 647, 1482, 1687
SduI GDGCHC 1 cut(s) 1516
SfaNI GCATC 6 cut(s) 617, 740, 945, 1432, 1542, 1685
SinI GGWCC 3 cut(s) 1084, 1211, 1269
SmlI CTYRAG 3 cut(s) 192, 1196, 1238
SmoI CTYRAG 3 cut(s) 192, 1196, 1238
SpeI ACTAGT 1 cut(s) 1666
SsiI CCGC 4 cut(s) 96, 266, 294, 894
SspMI CTAG 4 cut(s) 366, 851, 1667, 1711
StyD4I CCNGG 4 cut(s) 471, 645, 1480, 1685
StyI CCWWGG 1 cut(s) 547
TaaI ACNGT 7 cut(s) 25, 913, 1043, 1059, 1610, 1643, 1705
TaqI TCGA 2 cut(s) 450, 486
TatI WGTACW 2 cut(s) 844, 1192
TauI GCSGC 1 cut(s) 296
Tru1I TTAA 6 cut(s) 11, 458, 996, 1136, 1239, 1293
Tru9I TTAA 6 cut(s) 11, 458, 996, 1136, 1239, 1293
TscAI CASTG 6 cut(s) 83, 516, 1048, 1072, 1590, 1708
TseI GCWGC 1 cut(s) 859
TspDTI ATGAA 4 cut(s) 113, 998, 1043, 1652
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 6 cut(s) 83, 516, 1048, 1072, 1590, 1708
Vha464I CTTAAG 1 cut(s) 1238
VpaK11BI GGWCC 3 cut(s) 1084, 1211, 1269
XagI CCTNNNNNAGG 1 cut(s) 650
XapI RAATTY 6 cut(s) 120, 519, 934, 1019, 1370, 1622
XceI RCATGY 1 cut(s) 565
XmiI GTMKAC 1 cut(s) 40
XspI CTAG 4 cut(s) 366, 851, 1667, 1711
ZrmI AGTACT 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.