Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0010266

Physical Location & Seq

Genomic Coordinates Forward (+)

16863325 .. 16865814

Gene Structure 2490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G159500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 768 bp

ATGGCTCCTCATGGCGACAAATCGGACGCTGCAGACGAAACCATGGTTGCTAAAGCTGAGAAGCGCCCCATTTCCACCATCCTCATCGTATTGGTAATGATCTTTGCAAGTAACTTAACAGCTATGCAGAGTGAAGCTCTTCCTGTGGTGAACAAGCTTAACCTCTCAGAGGATCTTCAGTCTGTATTCCCAAAAGGGGTGCCTTGGGTCCGGTATCGCGGTTTTTACAAGGATCTTAACATTAATCTAGTTTGGCCTGGAAAAGATTCATCTTTAGGGGTTGATTGTGTAGGCACGGTTCCTGCATCTCTTGTGACCTATGCTTCCATTCAAGCATTGCAGCCAGACCTAATTATCAATGCAGGCACTGCTGGTGGCTTTAAGGCCAAAGGAGCATGCATTGGTGATGTGTATGTCGCATCTGATGTTGCTTTCTGTGATAGAAGGATACCTATTCCTGTTTTTGATCTATATGGACTTGGCTTGCGACAAGCCCTCTCAACACCCAATCTTCAAAAGGAACTTAACCTAAAGGATGAAGCATCAATGGTTGCGAATGACGCTGTAGTTAAAGACATGGAGGCTGCAGCTGTTGCCTACGTGGCAGATCTGTTGAAAGTACCCTCAGTATTTCTTAAAGTTGTGATTGATATAAAAGATGGTGAGGAAACAACTGCAGAAGAATCTTCGCAACGCTTCGCAGCTCTTGAACGTGCGGTCACCCAAGTTACTGATTTTATTAATGGAAAGTGCCTCTCAGATCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008477 GO:0008652 GO:0008930 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009888 GO:0009987 GO:0010087 GO:0016053 GO:0016787 GO:0016798 GO:0016799 GO:0017144 GO:0019509 GO:0019752 GO:0032502 GO:0043094 GO:0043102 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0046394 GO:0048856 GO:0071265 GO:0071267 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 map00270 map01100

Pfam Domains

Protein Families

B3 PNP_UDP_1

Protein Analysis

256

Amino Acids

27.4

Weight (kDa)

4.78

Isoelectric Point (pI)

35.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010266)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34840 AT4G34840 AT4G34840 AT4G34840 AT4G34840 AT4G38800
fragaria_vesca	FvH4_2g02150
malus_domestica	MD10G1116600.v1.1
prunus_persica	Prupe.8G159400_v2.0.a1 Prupe.8G159500_v2.0.a1
pyrus_communis	pycom10g10140
rosa_chinensis	RchiOBHm_Chr6g0245651
rosa_laevigata	RLG00000015296
rosa_multiflora	Rmu_sc0016035.1_g000004
rosa_roxburghii	Rroxscaffold_7G00215150
rosa_rugosa	Rorug05G0515300
rosa_samantha	Rh6AG030000 Rh6BG027400 Rh6CG026700 Rh6DG026100
rosa_wichuraiana	Rw6G002570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	199
AccII	CGCG	1 cut(s)	219
AciI	CCGC	2 cut(s)	219, 716
AclWI	GGATC	2 cut(s)	180, 240
AcuI	CTGAAG	1 cut(s)	161
AfaI	GTAC	1 cut(s)	621
AfiI	CCNNNNNNNGG	2 cut(s)	169, 196
AgsI	TTSAA	4 cut(s)	332, 515, 616, 710
AjnI	CCWGG	1 cut(s)	256
AluBI	AGCT	6 cut(s)	56, 122, 137, 157, 590, 704
AluI	AGCT	6 cut(s)	56, 122, 137, 157, 590, 704
AlwI	GGATC	2 cut(s)	180, 240
AlwNI	CAGNNNCTG	1 cut(s)	368
AoxI	GGCC	2 cut(s)	254, 384
ApeKI	GCWGC	5 cut(s)	29, 340, 584, 587, 701
AseI	ATTAAT	2 cut(s)	243, 741
Asp700I	GAANNNNTTC	2 cut(s)	138, 265
AspLEI	GCGC	1 cut(s)	66
AspS9I	GGNCC	1 cut(s)	208
AsuHPI	GGTGA	4 cut(s)	160, 416, 674, 712
AvaII	GGWCC	1 cut(s)	208
BanI	GGYRCC	1 cut(s)	199
BbvI	GCAGC	5 cut(s)	16, 352, 571, 599, 713
BccI	CCATC	2 cut(s)	86, 653
BciT130I	CCWGG	1 cut(s)	258
BciVI	GTATCC	1 cut(s)	441
BfaI	CTAG	1 cut(s)	248
BfmI	CTRYAG	4 cut(s)	30, 564, 585, 675
BfoI	RGCGCY	1 cut(s)	67
BfuI	GTATCC	1 cut(s)	441
BglI	GCCNNNNNGGC	1 cut(s)	602
BglII	AGATCT	2 cut(s)	607, 760
BisI	GCNGC	5 cut(s)	30, 341, 585, 588, 702
BlsI	GCNGC	5 cut(s)	31, 342, 586, 589, 703
Bme1390I	CCNGG	1 cut(s)	258
Bme18I	GGWCC	1 cut(s)	208
BmgT120I	GGNCC	1 cut(s)	208
BmiI	GGNNCC	4 cut(s)	6, 201, 209, 300
BmrFI	CCNGG	1 cut(s)	258
BmsI	GCATC	3 cut(s)	314, 428, 551
BplI	GAGNNNNNCTC	2 cut(s)	121, 153
BsaAI	YACGTR	1 cut(s)	601
BsaJI	CCNNGG	2 cut(s)	42, 203
BsaWI	WCCGGW	1 cut(s)	210
Bsc4I	CCNNNNNNNGG	2 cut(s)	169, 196
Bse3DI	GCAATG	1 cut(s)	335
BseBI	CCWGG	1 cut(s)	258
BseDI	CCNNGG	2 cut(s)	42, 203
BseGI	GGATG	2 cut(s)	78, 541
BseLI	CCNNNNNNNGG	2 cut(s)	169, 196
BseMI	GCAATG	1 cut(s)	335
BseMII	CTCAG	3 cut(s)	48, 180, 639
BseXI	GCAGC	5 cut(s)	16, 352, 571, 599, 713
Bsh1236I	CGCG	1 cut(s)	219
BshFI	GGCC	2 cut(s)	256, 386
BshNI	GGYRCC	1 cut(s)	199
BsiSI	CCGG	1 cut(s)	211
BslI	CCNNNNNNNGG	2 cut(s)	169, 196
BsnI	GGCC	2 cut(s)	256, 386
Bsp143I	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	2 cut(s)	219, 716
BspANI	GGCC	2 cut(s)	256, 386
BspCNI	CTCAG	3 cut(s)	49, 179, 638
BspFNI	CGCG	1 cut(s)	219
BspLI	GGNNCC	4 cut(s)	6, 201, 209, 300
BspMAI	CTGCAG	3 cut(s)	34, 589, 679
BspPI	GGATC	2 cut(s)	180, 240
BspQI	GCTCTTC	1 cut(s)	144
BspT107I	GGYRCC	1 cut(s)	199
BsrDI	GCAATG	1 cut(s)	335
BssECI	CCNNGG	2 cut(s)	42, 203
BssMI	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
BssT1I	CCWWGG	2 cut(s)	42, 203
Bst2UI	CCWGG	1 cut(s)	258
Bst4CI	ACNGT	1 cut(s)	298
Bst6I	CTCTTC	1 cut(s)	144
BstAPI	GCANNNNNTGC	2 cut(s)	368, 593
BstBAI	YACGTR	1 cut(s)	601
BstC8I	GCNNGC	3 cut(s)	364, 397, 485
BstDEI	CTNAG	4 cut(s)	57, 166, 625, 757
BstDSI	CCRYGG	1 cut(s)	42
BstEII	GGTNACC	1 cut(s)	718
BstENI	CCTNNNNNAGG	1 cut(s)	167
BstF5I	GGATG	2 cut(s)	78, 541
BstFNI	CGCG	1 cut(s)	219
BstH2I	RGCGCY	1 cut(s)	67
BstHHI	GCGC	1 cut(s)	66
BstKTI	GATC	6 cut(s)	102, 175, 235, 469, 610, 763
BstMBI	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
BstMWI	GCNNNNNNNGC	5 cut(s)	368, 392, 560, 593, 602
BstNI	CCWGG	1 cut(s)	258
BstNSI	RCATGY	1 cut(s)	399
BstPI	GGTNACC	1 cut(s)	718
BstSCI	CCNGG	1 cut(s)	256
BstSFI	CTRYAG	4 cut(s)	30, 564, 585, 675
BstUI	CGCG	1 cut(s)	219
BstV1I	GCAGC	5 cut(s)	16, 352, 571, 599, 713
BstX2I	RGATCY	4 cut(s)	172, 232, 607, 760
BstYI	RGATCY	4 cut(s)	172, 232, 607, 760
BsuI	GTATCC	1 cut(s)	441
BsuRI	GGCC	2 cut(s)	256, 386
BtgI	CCRYGG	1 cut(s)	42
BtsCI	GGATG	2 cut(s)	78, 541
BtsI	GCAGTG	1 cut(s)	366
BtsIMutI	CAGTG	1 cut(s)	366
Cac8I	GCNNGC	3 cut(s)	364, 397, 485
CaiI	CAGNNNCTG	1 cut(s)	368
CfoI	GCGC	1 cut(s)	66
Cfr13I	GGNCC	1 cut(s)	208
CseI	GACGC	2 cut(s)	35, 569
Csp6I	GTAC	1 cut(s)	620
CviAII	CATG	4 cut(s)	11, 43, 396, 577
CviQI	GTAC	1 cut(s)	620
DdeI	CTNAG	4 cut(s)	57, 166, 625, 757
DpnI	GATC	6 cut(s)	101, 174, 234, 468, 609, 762
DpnII	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
Eam1104I	CTCTTC	1 cut(s)	144
EarI	CTCTTC	1 cut(s)	144
Eco130I	CCWWGG	2 cut(s)	42, 203
Eco47I	GGWCC	1 cut(s)	208
Eco57I	CTGAAG	1 cut(s)	161
Eco91I	GGTNACC	1 cut(s)	718
EcoNI	CCTNNNNNAGG	1 cut(s)	167
EcoO65I	GGTNACC	1 cut(s)	718
EcoRII	CCWGG	1 cut(s)	256
EcoT14I	CCWWGG	2 cut(s)	42, 203
EcoT22I	ATGCAT	1 cut(s)	401
ErhI	CCWWGG	2 cut(s)	42, 203
FaeI	CATG	4 cut(s)	14, 46, 399, 580
FatI	CATG	4 cut(s)	10, 42, 395, 576
Fnu4HI	GCNGC	5 cut(s)	30, 341, 585, 588, 702
FokI	GGATG	2 cut(s)	65, 548
Fsp4HI	GCNGC	5 cut(s)	30, 341, 585, 588, 702
FspBI	CTAG	1 cut(s)	248
GlaI	GCGC	1 cut(s)	65
GluI	GCNGC	5 cut(s)	30, 341, 585, 588, 702
HaeII	RGCGCY	1 cut(s)	67
HaeIII	GGCC	2 cut(s)	256, 386
HapII	CCGG	1 cut(s)	211
HgaI	GACGC	2 cut(s)	35, 569
HhaI	GCGC	1 cut(s)	66
Hin1II	CATG	4 cut(s)	14, 46, 399, 580
Hin6I	GCGC	1 cut(s)	64
HinP1I	GCGC	1 cut(s)	64
HindIII	AAGCTT	1 cut(s)	155
HinfI	GANTC	2 cut(s)	266, 683
HpaII	CCGG	1 cut(s)	211
HphI	GGTGA	4 cut(s)	160, 416, 674, 712
Hpy166II	GTNNAC	1 cut(s)	151
Hpy188I	TCNGA	4 cut(s)	25, 169, 424, 760
Hpy188III	TCNNGA	1 cut(s)	707
Hpy8I	GTNNAC	1 cut(s)	151
HpyAV	CCTTC	1 cut(s)	438
HpyCH4III	ACNGT	1 cut(s)	298
HpyCH4IV	ACGT	2 cut(s)	600, 712
HpyCH4V	TGCA	9 cut(s)	32, 107, 127, 305, 340, 362, 399, 587, 677
HpyF10VI	GCNNNNNNNGC	5 cut(s)	368, 392, 560, 593, 602
HpyF3I	CTNAG	4 cut(s)	57, 166, 625, 757
HpySE526I	ACGT	2 cut(s)	600, 712
Hsp92II	CATG	4 cut(s)	14, 46, 399, 580
HspAI	GCGC	1 cut(s)	64
Kzo9I	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
LguI	GCTCTTC	1 cut(s)	144
LmnI	GCTCC	2 cut(s)	10, 392
LpnPI	CCDG	9 cut(s)	156, 224, 243, 270, 315, 348, 357, 357, 471
Lsp1109I	GCAGC	5 cut(s)	16, 352, 571, 599, 713
LweI	GCATC	3 cut(s)	314, 428, 551
MaeI	CTAG	1 cut(s)	248
MaeII	ACGT	2 cut(s)	600, 712
MaeIII	GTNAC	4 cut(s)	110, 313, 718, 727
MalI	GATC	6 cut(s)	101, 174, 234, 468, 609, 762
MboI	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
MboII	GAAGA	5 cut(s)	131, 167, 503, 678, 692
MflI	RGATCY	4 cut(s)	172, 232, 607, 760
MluCI	AATT	1 cut(s)	351
MnlI	CCTC	9 cut(s)	18, 92, 163, 173, 506, 574, 634, 658, 764
Mph1103I	ATGCAT	1 cut(s)	401
MroXI	GAANNNNTTC	2 cut(s)	138, 265
MseI	TTAA	9 cut(s)	116, 159, 237, 243, 381, 525, 570, 636, 741
MspA1I	CMGCKG	1 cut(s)	590
MspI	CCGG	1 cut(s)	211
MspR9I	CCNGG	1 cut(s)	258
MvaI	CCWGG	1 cut(s)	258
MvnI	CGCG	1 cut(s)	219
MwoI	GCNNNNNNNGC	5 cut(s)	368, 392, 560, 593, 602
NcoI	CCATGG	1 cut(s)	42
NdeII	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
NlaIII	CATG	4 cut(s)	14, 46, 399, 580
NlaIV	GGNNCC	4 cut(s)	6, 201, 209, 300
NmuCI	GTSAC	2 cut(s)	313, 718
NsiI	ATGCAT	1 cut(s)	401
NspI	RCATGY	1 cut(s)	399
PaeI	GCATGC	1 cut(s)	399
PciSI	GCTCTTC	1 cut(s)	144
PcsI	WCGNNNNNNNCGW	1 cut(s)	33
PdmI	GAANNNNTTC	2 cut(s)	138, 265
PfeI	GAWTC	2 cut(s)	266, 683
PkrI	GCNGC	5 cut(s)	31, 342, 586, 589, 703
Ppu21I	YACGTR	1 cut(s)	601
PshBI	ATTAAT	2 cut(s)	243, 741
Psp6I	CCWGG	1 cut(s)	256
PspEI	GGTNACC	1 cut(s)	718
PspGI	CCWGG	1 cut(s)	256
PspN4I	GGNNCC	4 cut(s)	6, 201, 209, 300
PspPI	GGNCC	1 cut(s)	208
PsrI	GAACNNNNNNTAC	2 cut(s)	282, 314
PstI	CTGCAG	3 cut(s)	34, 589, 679
PstNI	CAGNNNCTG	1 cut(s)	368
PsuI	RGATCY	4 cut(s)	172, 232, 607, 760
PvuII	CAGCTG	1 cut(s)	590
RsaI	GTAC	1 cut(s)	621
RsaNI	GTAC	1 cut(s)	620
SapI	GCTCTTC	1 cut(s)	144
SaqAI	TTAA	9 cut(s)	116, 159, 237, 243, 381, 525, 570, 636, 741
SatI	GCNGC	5 cut(s)	30, 341, 585, 588, 702
Sau3AI	GATC	6 cut(s)	99, 172, 232, 466, 607, 760
Sau96I	GGNCC	1 cut(s)	208
ScrFI	CCNGG	1 cut(s)	258
SfaNI	GCATC	3 cut(s)	314, 428, 551
SfcI	CTRYAG	4 cut(s)	30, 564, 585, 675
SinI	GGWCC	1 cut(s)	208
SphI	GCATGC	1 cut(s)	399
Sse9I	AATT	1 cut(s)	351
SsiI	CCGC	2 cut(s)	219, 716
SspMI	CTAG	1 cut(s)	248
StyD4I	CCNGG	1 cut(s)	256
StyI	CCWWGG	2 cut(s)	42, 203
TaaI	ACNGT	1 cut(s)	298
TaiI	ACGT	2 cut(s)	603, 715
TasI	AATT	1 cut(s)	351
TfiI	GAWTC	2 cut(s)	266, 683
Tru1I	TTAA	9 cut(s)	116, 159, 237, 243, 381, 525, 570, 636, 741
Tru9I	TTAA	9 cut(s)	116, 159, 237, 243, 381, 525, 570, 636, 741
TscAI	CASTG	1 cut(s)	373
TseFI	GTSAC	2 cut(s)	313, 718
TseI	GCWGC	5 cut(s)	29, 340, 584, 587, 701
Tsp45I	GTSAC	2 cut(s)	313, 718
TspDTI	ATGAA	2 cut(s)	258, 552
TspRI	CASTG	1 cut(s)	373
VpaK11BI	GGWCC	1 cut(s)	208
VspI	ATTAAT	2 cut(s)	243, 741
XagI	CCTNNNNNAGG	1 cut(s)	167
XceI	RCATGY	1 cut(s)	399
XmnI	GAANNNNTTC	2 cut(s)	138, 265
XspI	CTAG	1 cut(s)	248
Zsp2I	ATGCAT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.