Prupe.8G163900_v2.0.a1

Belongs to the actin-binding proteins ADF family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17100213 .. 17101834
1622 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G163900.1

Sequence Viewer

Length: 432 bp
ATGGCAATGGCATTCAAGATGGCTACAACTGGGATGTGGGTTACAGATGAGTGCAAGAGCTCATTCATGGAGATGAAATGGAAGAAGGTCCACAGGTACATAGTGTTCAAGATTGATGAAGGATCAAGGCTGGTCACTGTTGATAAGGTTGGAGGGCCTGGTGAGAGCTATGATGATCTGGCAGCCTCCTTGCCCAAAGATGATTGTAGATATGCTGTCTTTGACTTTGATTTTGTCACTGTTGATAATTGCAGGAAGAGCAAACTCTTCTTCATTGCCTGGTCACCAAGTGCATCAAGAATTAGGGCAAAAATTCTGTATGCAACCTCCAAAGCTGGGCTGAGGAGAGTTCTGGATGGCATCAGCTATGAACTCCAGGCCACTGATCCAACTGAGATGGGGATGGATGTGATCAAGGACAGAGCCAAATAA

Protein Analysis

144

Amino Acids

16.22

Weight (kDa)

8.73

Isoelectric Point (pI)

29.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011901)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 130, 380
AcsI RAATTY 1 cut(s) 312
AdeI CACNNNGTG 1 cut(s) 290
AfaI GTAC 1 cut(s) 98
AfiI CCNNNNNNNGG 1 cut(s) 336
AgsI TTSAA 2 cut(s) 16, 109
AjnI CCWGG 3 cut(s) 157, 278, 375
AluBI AGCT 4 cut(s) 60, 168, 335, 366
AluI AGCT 4 cut(s) 60, 168, 335, 366
Alw21I GWGCWC 1 cut(s) 62
AlwI GGATC 2 cut(s) 130, 380
AoxI GGCC 2 cut(s) 155, 378
ApeKI GCWGC 1 cut(s) 182
ApoI RAATTY 1 cut(s) 312
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
AspS9I GGNCC 2 cut(s) 88, 155
AsuHPI GGTGA 2 cut(s) 173, 276
AvaII GGWCC 1 cut(s) 88
BanII GRGCYC 1 cut(s) 62
Bbv12I GWGCWC 1 cut(s) 62
BbvCI CCTCAGC 1 cut(s) 341
BbvI GCAGC 1 cut(s) 194
BccI CCATC 4 cut(s) 13, 350, 391, 397
BciT130I CCWGG 3 cut(s) 159, 280, 377
BclI TGATCA 1 cut(s) 411
BisI GCNGC 1 cut(s) 183
BlsI GCNGC 1 cut(s) 184
Bme1390I CCNGG 3 cut(s) 159, 280, 377
Bme18I GGWCC 1 cut(s) 88
BmgT120I GGNCC 2 cut(s) 88, 155
BmrFI CCNGG 3 cut(s) 159, 280, 377
BmrI ACTGGG 1 cut(s) 39
BmsI GCATC 2 cut(s) 302, 369
BmuI ACTGGG 1 cut(s) 39
BpmI CTGGAG 1 cut(s) 359
Bpu10I CCTNAGC 1 cut(s) 341
Bsc4I CCNNNNNNNGG 1 cut(s) 336
Bse1I ACTGG 1 cut(s) 34
Bse3DI GCAATG 2 cut(s) 12, 273
BseBI CCWGG 3 cut(s) 159, 280, 377
BseGI GGATG 4 cut(s) 39, 361, 408, 412
BseLI CCNNNNNNNGG 1 cut(s) 336
BseMI GCAATG 2 cut(s) 12, 273
BseMII CTCAG 2 cut(s) 332, 384
BseNI ACTGG 1 cut(s) 34
BseRI GAGGAG 1 cut(s) 358
BseXI GCAGC 1 cut(s) 194
BseYI CCCAGC 1 cut(s) 335
BshFI GGCC 2 cut(s) 157, 380
BsiHKAI GWGCWC 1 cut(s) 62
BslI CCNNNNNNNGG 1 cut(s) 336
BsmI GAATGC 1 cut(s) 11
BsnI GGCC 2 cut(s) 157, 380
Bsp1286I GDGCHC 1 cut(s) 62
Bsp143I GATC 4 cut(s) 122, 175, 385, 411
BspANI GGCC 2 cut(s) 157, 380
BspCNI CTCAG 2 cut(s) 333, 385
BspPI GGATC 2 cut(s) 130, 380
BspQI GCTCTTC 1 cut(s) 251
BsrDI GCAATG 2 cut(s) 12, 273
BsrI ACTGG 1 cut(s) 34
BssMI GATC 4 cut(s) 122, 175, 385, 411
Bst2UI CCWGG 3 cut(s) 159, 280, 377
Bst4CI ACNGT 2 cut(s) 139, 241
Bst6I CTCTTC 2 cut(s) 251, 272
BstDEI CTNAG 2 cut(s) 341, 393
BstEII GGTNACC 1 cut(s) 282
BstF5I GGATG 4 cut(s) 39, 361, 408, 412
BstKTI GATC 4 cut(s) 125, 178, 388, 414
BstMBI GATC 4 cut(s) 122, 175, 385, 411
BstMWI GCNNNNNNNGC 1 cut(s) 258
BstNI CCWGG 3 cut(s) 159, 280, 377
BstPI GGTNACC 1 cut(s) 282
BstSCI CCNGG 3 cut(s) 157, 278, 375
BstV1I GCAGC 1 cut(s) 194
BsuRI GGCC 2 cut(s) 157, 380
BtsCI GGATG 4 cut(s) 39, 361, 408, 412
BtsIMutI CAGTG 3 cut(s) 135, 237, 381
Cfr13I GGNCC 2 cut(s) 88, 155
Csp6I GTAC 1 cut(s) 97
CviAII CATG 1 cut(s) 67
CviQI GTAC 1 cut(s) 97
DdeI CTNAG 2 cut(s) 341, 393
DpnI GATC 4 cut(s) 124, 177, 387, 413
DpnII GATC 4 cut(s) 122, 175, 385, 411
DraIII CACNNNGTG 1 cut(s) 290
Eam1104I CTCTTC 2 cut(s) 251, 272
EarI CTCTTC 2 cut(s) 251, 272
Ecl136II GAGCTC 1 cut(s) 60
Eco24I GRGCYC 1 cut(s) 62
Eco47I GGWCC 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 60
Eco91I GGTNACC 1 cut(s) 282
EcoICRI GAGCTC 1 cut(s) 60
EcoO109I RGGNCCY 1 cut(s) 155
EcoO65I GGTNACC 1 cut(s) 282
EcoRII CCWGG 3 cut(s) 157, 278, 375
EcoT38I GRGCYC 1 cut(s) 62
FaeI CATG 1 cut(s) 70
FaiI YATR 6 cut(s) 68, 101, 171, 213, 321, 369
FatI CATG 1 cut(s) 66
FbaI TGATCA 1 cut(s) 411
Fnu4HI GCNGC 1 cut(s) 183
FokI GGATG 4 cut(s) 46, 368, 415, 419
FriOI GRGCYC 1 cut(s) 62
Fsp4HI GCNGC 1 cut(s) 183
GluI GCNGC 1 cut(s) 183
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 359
HaeIII GGCC 2 cut(s) 157, 380
Hin1II CATG 1 cut(s) 70
HphI GGTGA 2 cut(s) 173, 276
Hpy166II GTNNAC 1 cut(s) 91
Hpy188III TCNNGA 4 cut(s) 16, 109, 297, 353
Hpy8I GTNNAC 1 cut(s) 91
HpyAV CCTTC 2 cut(s) 79, 113
HpyCH4III ACNGT 2 cut(s) 139, 241
HpyCH4V TGCA 4 cut(s) 54, 252, 293, 323
HpyF10VI GCNNNNNNNGC 1 cut(s) 258
HpyF3I CTNAG 2 cut(s) 341, 393
Hsp92II CATG 1 cut(s) 70
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 4 cut(s) 122, 175, 385, 411
LguI GCTCTTC 1 cut(s) 251
Lsp1109I GCAGC 1 cut(s) 194
LweI GCATC 2 cut(s) 302, 369
MaeIII GTNAC 4 cut(s) 40, 133, 235, 282
MalI GATC 4 cut(s) 124, 177, 387, 413
MboI GATC 4 cut(s) 122, 175, 385, 411
MboII GAAGA 4 cut(s) 94, 259, 262, 268
MhlI GDGCHC 1 cut(s) 62
MluCI AATT 3 cut(s) 247, 300, 312
MmeI TCCRAC 2 cut(s) 130, 413
MnlI CCTC 4 cut(s) 146, 196, 336, 337
MslI CAYNNNNRTG 1 cut(s) 71
MspR9I CCNGG 3 cut(s) 159, 280, 377
Mva1269I GAATGC 1 cut(s) 11
MvaI CCWGG 3 cut(s) 159, 280, 377
MwoI GCNNNNNNNGC 1 cut(s) 258
NdeII GATC 4 cut(s) 122, 175, 385, 411
NlaIII CATG 1 cut(s) 70
NmuCI GTSAC 3 cut(s) 133, 235, 282
PciSI GCTCTTC 1 cut(s) 251
PctI GAATGC 1 cut(s) 11
PkrI GCNGC 1 cut(s) 184
Psp124BI GAGCTC 1 cut(s) 62
Psp6I CCWGG 3 cut(s) 157, 278, 375
PspEI GGTNACC 1 cut(s) 282
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 3 cut(s) 157, 278, 375
PspPI GGNCC 2 cut(s) 88, 155
PsrI GAACNNNNNNTAC 2 cut(s) 89, 121
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
RseI CAYNNNNRTG 1 cut(s) 71
SacI GAGCTC 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 251
SatI GCNGC 1 cut(s) 183
Sau3AI GATC 4 cut(s) 122, 175, 385, 411
Sau96I GGNCC 2 cut(s) 88, 155
ScrFI CCNGG 3 cut(s) 159, 280, 377
SduI GDGCHC 1 cut(s) 62
SetI ASST 8 cut(s) 62, 90, 98, 150, 170, 329, 337, 368
SfaNI GCATC 2 cut(s) 302, 369
SinI GGWCC 1 cut(s) 88
SmiMI CAYNNNNRTG 1 cut(s) 71
Sse9I AATT 3 cut(s) 247, 300, 312
SstI GAGCTC 1 cut(s) 62
StyD4I CCNGG 3 cut(s) 157, 278, 375
TaaI ACNGT 2 cut(s) 139, 241
TasI AATT 3 cut(s) 247, 300, 312
TscAI CASTG 3 cut(s) 142, 244, 388
TseFI GTSAC 3 cut(s) 133, 235, 282
TseI GCWGC 1 cut(s) 182
Tsp45I GTSAC 3 cut(s) 133, 235, 282
TspDTI ATGAA 5 cut(s) 55, 89, 132, 262, 384
TspRI CASTG 3 cut(s) 142, 244, 388
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 1 cut(s) 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.