Rorug05G0507100

Belongs to the actin-binding proteins ADF family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
68891801 .. 68891971
171 bp
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UTR
Exon/CDS
Intron
Rorug05G0507100.1

Sequence Viewer

Length: 171 bp
ATGATGGTGCATTGTCCTTGTACGTGGTCTGGTTGTTTTTTTGGACACGGTGTGGAAGAGGGTAAAGTGGTTCGTCTTAATGTTGGTGGCAAGGTTGTATCGTTACATTCGGGATTGGTTTACTTTCATTGTAGCCCGAGGTTATGGGCGAAAAGGTTGGTTCAGGGTTGA

Protein Analysis

56

Amino Acids

6.2

Weight (kDa)

9.2

Isoelectric Point (pI)

25.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011901)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 1 cut(s) 22
Ama87I CYCGRG 1 cut(s) 136
AvaI CYCGRG 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 136
BsaAI YACGTR 1 cut(s) 24
BsaJI CCNNGG 1 cut(s) 137
BseDI CCNNGG 1 cut(s) 137
BsiHKCI CYCGRG 1 cut(s) 136
BsoBI CYCGRG 1 cut(s) 136
BssECI CCNNGG 1 cut(s) 137
Bst4CI ACNGT 1 cut(s) 50
Bst6I CTCTTC 1 cut(s) 51
BstBAI YACGTR 1 cut(s) 24
Csp6I GTAC 1 cut(s) 21
CviJI RGCY 1 cut(s) 135
CviKI_1 RGCY 1 cut(s) 135
CviQI GTAC 1 cut(s) 21
DraIII CACNNNGTG 1 cut(s) 52
Eam1104I CTCTTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 51
Eco88I CYCGRG 1 cut(s) 136
FaiI YATR 1 cut(s) 145
Hpy166II GTNNAC 1 cut(s) 121
Hpy188III TCNNGA 1 cut(s) 111
Hpy8I GTNNAC 1 cut(s) 121
HpyCH4III ACNGT 1 cut(s) 50
HpyCH4IV ACGT 1 cut(s) 23
HpyCH4V TGCA 1 cut(s) 10
HpySE526I ACGT 1 cut(s) 23
LpnPI CCDG 2 cut(s) 15, 149
MaeII ACGT 1 cut(s) 23
MaeIII GTNAC 1 cut(s) 102
MboII GAAGA 1 cut(s) 68
MnlI CCTC 2 cut(s) 52, 132
MseI TTAA 1 cut(s) 78
Ppu21I YACGTR 1 cut(s) 24
RsaI GTAC 1 cut(s) 22
RsaNI GTAC 1 cut(s) 21
SaqAI TTAA 1 cut(s) 78
SetI ASST 4 cut(s) 26, 96, 143, 158
SgeI CNNG 8 cut(s) 30, 36, 42, 59, 103, 123, 148, 150
TaaI ACNGT 1 cut(s) 50
TaiI ACGT 1 cut(s) 26
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
TspDTI ATGAA 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.