Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003185

Physical Location & Seq

Genomic Coordinates Forward (+)

17192514 .. 17196373

Gene Structure 3860 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G165400.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 819 bp

ATGGAGGACGGAGAGCTCGATTTTTCGAACCAAGAGATGTTTTCGGGTCCAAACATGGGGGGTGAACATCCGAGTAGTTGCTCAATGGACAGCTTCTTTGATGACCTTCTTAAGGACACTCATGCTTGCACTCACACCCACACTTGCAATCCACCTGGCCCTGACTACTCTCATACACACACTTGCTTTCATGTACACACTAAAATCGTGTCTTCAGCAACAGGAAGTGAAGACAAGGCTGGAACTGATGACACTGCTGAATCTGGGGAAAAGAAATCGAAGAAACGTCCTTTAGGTAATCGAGAAGCAGTTCGTAAGTACCGCGAGAAGAAGAAGGCACGGGCAGCGTCTTTGGAGGATGAAGTTGTGAGATTGAGAACTCTGAATCAGCAGTTATTGAAGAGGTTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTGCGAGGCTCAAGTGTTTGCTTGTGGACATTCGAGGAAGAATTGAAGGAGAAATTGGATCTTTTCCATATCAGAAATCAGTGAATCCCAACCTGCCCAACCCAAACATCCCCAGTGCGTATGTGATGAATCCATGTAATCTACAGCGTGATGATCAGCTTTATTGTCTTCATCAAGGGGCTGATGGAAAATGTGGAGATGGGGCGGTGATGAATGGGCAAGGATTTAGCGGTTGTGATTTTGAGAATCTTCAGTGTTTGGTAAATCAGGATGGAGGATACAAGGAGCTTTCTGGTTGTGGACTTGGAAATGGGGTGTCAAATGGTAATTCTTCTGCCACAAATAAGAGGAAGGGAGGGGCTCGAGCCGCAGCAGCAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010035 GO:0010038 GO:0010043 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_2

Protein Analysis

273

Amino Acids

29.41

Weight (kDa)

6.31

Isoelectric Point (pI)

28.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16770 AT2G16770 AT4G35040 AT4G35040 AT4G35040 AT4G35040
fragaria_vesca	FvH4_2g01190 FvH4_2g01190 FvH4_2g01190
malus_domestica	MD05G1121500.v1.1 MD10G1124200.v1.1
prunus_persica	Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1 Prupe.8G165400_v2.0.a1
pyrus_communis	pycom05g11560
rosa_chinensis	RchiOBHm_Chr6g0251821
rosa_laevigata	RLG00000015427
rosa_multiflora	Rmu_co8227239.1_g000001 Rmu_sc0003965.1_g000002 Rmu_ssc0000213.1_g000117
rosa_roxburghii	Rroxscaffold_7G00216360
rosa_rugosa	Rorug05G0504100 Rorug05G0504200 Rorug05G0504300 Rorug05G0504400 Rorug05G0504500 Rorug05G0504600
rosa_samantha	Rh6AG015100 Rh6BG013400 Rh6CG010400 Rh6DG011600
rosa_wichuraiana	Rw6G001480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	537
AccII	CGCG	1 cut(s)	324
AciI	CCGC	4 cut(s)	322, 641, 666, 804
AclWI	GGATC	1 cut(s)	502
AcuI	CTGAAG	2 cut(s)	198, 671
AfaI	GTAC	2 cut(s)	195, 320
AfiI	CCNNNNNNNGG	2 cut(s)	56, 112
AflII	CTTAAG	1 cut(s)	110
AgsI	TTSAA	2 cut(s)	400, 482
AjnI	CCWGG	1 cut(s)	154
AjuI	GAANNNNNNNTTGG	2 cut(s)	474, 506
AluBI	AGCT	4 cut(s)	16, 93, 595, 724
AluI	AGCT	4 cut(s)	16, 93, 595, 724
Alw21I	GWGCWC	1 cut(s)	18
AlwI	GGATC	1 cut(s)	502
Ama87I	CYCGRG	1 cut(s)	798
AoxI	GGCC	1 cut(s)	157
ApeKI	GCWGC	4 cut(s)	344, 419, 806, 809
ArsI	GACNNNNNNTTYG	2 cut(s)	80, 112
Asp700I	GAANNNNTTC	1 cut(s)	309
AspS9I	GGNCC	2 cut(s)	47, 158
AsuHPI	GGTGA	2 cut(s)	74, 655
AsuII	TTCGAA	1 cut(s)	26
AvaI	CYCGRG	1 cut(s)	798
AvaII	GGWCC	1 cut(s)	47
BanII	GRGCYC	2 cut(s)	18, 799
BbsI	GAAGAC	3 cut(s)	204, 237, 596
Bbv12I	GWGCWC	1 cut(s)	18
BbvI	GCAGC	2 cut(s)	356, 406
BccI	CCATC	3 cut(s)	614, 629, 701
BciT130I	CCWGG	1 cut(s)	156
BciVI	GTATCC	1 cut(s)	707
BclI	TGATCA	1 cut(s)	589
BfmI	CTRYAG	1 cut(s)	578
BfrI	CTTAAG	1 cut(s)	110
BfuAI	ACCTGC	1 cut(s)	537
BfuI	GTATCC	1 cut(s)	707
BisI	GCNGC	5 cut(s)	345, 420, 804, 807, 810
BlsI	GCNGC	5 cut(s)	346, 421, 805, 808, 811
Bme1390I	CCNGG	1 cut(s)	156
Bme18I	GGWCC	1 cut(s)	47
BmeT110I	CYCGRG	1 cut(s)	798
BmgT120I	GGNCC	2 cut(s)	47, 158
BmiI	GGNNCC	1 cut(s)	48
BmrFI	CCNGG	1 cut(s)	156
BmrI	ACTGGG	1 cut(s)	543
BmuI	ACTGGG	1 cut(s)	543
BpiI	GAAGAC	3 cut(s)	204, 237, 596
Bpu14I	TTCGAA	1 cut(s)	26
BpuEI	CTTGAG	1 cut(s)	431
Bsc4I	CCNNNNNNNGG	2 cut(s)	56, 112
Bse1I	ACTGG	1 cut(s)	549
BseBI	CCWGG	1 cut(s)	156
BseGI	GGATG	4 cut(s)	67, 364, 543, 712
BseLI	CCNNNNNNNGG	2 cut(s)	56, 112
BseMII	CTCAG	1 cut(s)	423
BseNI	ACTGG	1 cut(s)	549
BseXI	GCAGC	2 cut(s)	356, 406
Bsh1236I	CGCG	1 cut(s)	324
BshFI	GGCC	1 cut(s)	159
BsiHKAI	GWGCWC	1 cut(s)	18
BsiHKCI	CYCGRG	1 cut(s)	798
BslI	CCNNNNNNNGG	2 cut(s)	56, 112
BsnI	GGCC	1 cut(s)	159
BsoBI	CYCGRG	1 cut(s)	798
Bsp119I	TTCGAA	1 cut(s)	26
Bsp1286I	GDGCHC	2 cut(s)	18, 799
Bsp1407I	TGTACA	1 cut(s)	193
Bsp143I	GATC	2 cut(s)	494, 589
BspACI	CCGC	4 cut(s)	322, 641, 666, 804
BspANI	GGCC	1 cut(s)	159
BspCNI	CTCAG	1 cut(s)	424
BspFNI	CGCG	1 cut(s)	324
BspLI	GGNNCC	1 cut(s)	48
BspMI	ACCTGC	1 cut(s)	537
BspPI	GGATC	1 cut(s)	502
BspT104I	TTCGAA	1 cut(s)	26
BspTI	CTTAAG	1 cut(s)	110
BsrGI	TGTACA	1 cut(s)	193
BsrI	ACTGG	1 cut(s)	549
BssMI	GATC	2 cut(s)	494, 589
Bst2UI	CCWGG	1 cut(s)	156
Bst6I	CTCTTC	1 cut(s)	395
BstAFI	CTTAAG	1 cut(s)	110
BstAUI	TGTACA	1 cut(s)	193
BstBI	TTCGAA	1 cut(s)	26
BstC8I	GCNNGC	1 cut(s)	127
BstDEI	CTNAG	1 cut(s)	432
BstENI	CCTNNNNNAGG	1 cut(s)	110
BstF5I	GGATG	4 cut(s)	67, 364, 543, 712
BstFNI	CGCG	1 cut(s)	324
BstKTI	GATC	2 cut(s)	497, 592
BstMBI	GATC	2 cut(s)	494, 589
BstMWI	GCNNNNNNNGC	5 cut(s)	344, 428, 437, 803, 809
BstNI	CCWGG	1 cut(s)	156
BstSCI	CCNGG	1 cut(s)	154
BstSFI	CTRYAG	1 cut(s)	578
BstUI	CGCG	1 cut(s)	324
BstV1I	GCAGC	2 cut(s)	356, 406
BstV2I	GAAGAC	3 cut(s)	204, 237, 596
BstX2I	RGATCY	1 cut(s)	494
BstYI	RGATCY	1 cut(s)	494
BsuI	GTATCC	1 cut(s)	707
BsuRI	GGCC	1 cut(s)	159
BtsCI	GGATG	4 cut(s)	67, 364, 543, 712
BtsI	GCAGTG	1 cut(s)	252
BtsIMutI	CAGTG	4 cut(s)	252, 522, 556, 695
BveI	ACCTGC	1 cut(s)	537
Cac8I	GCNNGC	1 cut(s)	127
Cfr13I	GGNCC	2 cut(s)	47, 158
CseI	GACGC	1 cut(s)	336
Csp6I	GTAC	2 cut(s)	194, 319
CviAII	CATG	4 cut(s)	55, 122, 191, 570
CviQI	GTAC	2 cut(s)	194, 319
DdeI	CTNAG	1 cut(s)	432
DpnI	GATC	2 cut(s)	496, 591
DpnII	GATC	2 cut(s)	494, 589
Eam1104I	CTCTTC	1 cut(s)	395
EarI	CTCTTC	1 cut(s)	395
Ecl136II	GAGCTC	1 cut(s)	16
Eco24I	GRGCYC	2 cut(s)	18, 799
Eco47I	GGWCC	1 cut(s)	47
Eco53kI	GAGCTC	1 cut(s)	16
Eco57I	CTGAAG	2 cut(s)	198, 671
Eco88I	CYCGRG	1 cut(s)	798
EcoICRI	GAGCTC	1 cut(s)	16
EcoNI	CCTNNNNNAGG	1 cut(s)	110
EcoRII	CCWGG	1 cut(s)	154
EcoT38I	GRGCYC	2 cut(s)	18, 799
FaeI	CATG	4 cut(s)	58, 125, 194, 573
FaiI	YATR	7 cut(s)	56, 123, 174, 192, 505, 558, 571
FatI	CATG	4 cut(s)	54, 121, 190, 569
FbaI	TGATCA	1 cut(s)	589
Fnu4HI	GCNGC	5 cut(s)	345, 420, 804, 807, 810
FokI	GGATG	4 cut(s)	54, 371, 530, 719
FriOI	GRGCYC	2 cut(s)	18, 799
Fsp4HI	GCNGC	5 cut(s)	345, 420, 804, 807, 810
GluI	GCNGC	5 cut(s)	345, 420, 804, 807, 810
HaeIII	GGCC	1 cut(s)	159
HgaI	GACGC	1 cut(s)	336
Hin1II	CATG	4 cut(s)	58, 125, 194, 573
HinfI	GANTC	5 cut(s)	260, 385, 520, 565, 682
HphI	GGTGA	2 cut(s)	74, 655
Hpy166II	GTNNAC	4 cut(s)	65, 196, 463, 737
Hpy188I	TCNGA	3 cut(s)	72, 384, 510
Hpy188III	TCNNGA	2 cut(s)	302, 704
Hpy8I	GTNNAC	4 cut(s)	65, 196, 463, 737
HpyAV	CCTTC	4 cut(s)	116, 328, 476, 781
HpyCH4IV	ACGT	1 cut(s)	286
HpyCH4V	TGCA	4 cut(s)	129, 147, 409, 422
HpyF10VI	GCNNNNNNNGC	5 cut(s)	344, 428, 437, 803, 809
HpyF3I	CTNAG	1 cut(s)	432
HpySE526I	ACGT	1 cut(s)	286
Hsp92II	CATG	4 cut(s)	58, 125, 194, 573
Ksp22I	TGATCA	1 cut(s)	589
Kzo9I	GATC	2 cut(s)	494, 589
LmnI	GCTCC	1 cut(s)	721
Lsp1109I	GCAGC	2 cut(s)	356, 406
MaeII	ACGT	1 cut(s)	286
MalI	GATC	2 cut(s)	496, 591
MboI	GATC	2 cut(s)	494, 589
MflI	RGATCY	1 cut(s)	494
MhlI	GDGCHC	2 cut(s)	18, 799
MluCI	AATT	3 cut(s)	477, 489, 763
MnlI	CCTC	8 cut(s)	349, 396, 421, 435, 464, 704, 777, 785
MroXI	GAANNNNTTC	1 cut(s)	309
MseI	TTAA	1 cut(s)	111
MspCI	CTTAAG	1 cut(s)	110
MspR9I	CCNGG	1 cut(s)	156
MvaI	CCWGG	1 cut(s)	156
MvnI	CGCG	1 cut(s)	324
MwoI	GCNNNNNNNGC	5 cut(s)	344, 428, 437, 803, 809
NdeII	GATC	2 cut(s)	494, 589
NlaIII	CATG	4 cut(s)	58, 125, 194, 573
NlaIV	GGNNCC	1 cut(s)	48
NspV	TTCGAA	1 cut(s)	26
PaeR7I	CTCGAG	1 cut(s)	798
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PdmI	GAANNNNTTC	1 cut(s)	309
PfeI	GAWTC	5 cut(s)	260, 385, 520, 565, 682
PkrI	GCNGC	5 cut(s)	346, 421, 805, 808, 811
Psp124BI	GAGCTC	1 cut(s)	18
Psp6I	CCWGG	1 cut(s)	154
PspGI	CCWGG	1 cut(s)	154
PspN4I	GGNNCC	1 cut(s)	48
PspPI	GGNCC	2 cut(s)	47, 158
PspXI	VCTCGAGB	1 cut(s)	798
PsuI	RGATCY	1 cut(s)	494
RsaI	GTAC	2 cut(s)	195, 320
RsaNI	GTAC	2 cut(s)	194, 319
SacI	GAGCTC	1 cut(s)	18
SaqAI	TTAA	1 cut(s)	111
SatI	GCNGC	5 cut(s)	345, 420, 804, 807, 810
Sau3AI	GATC	2 cut(s)	494, 589
Sau96I	GGNCC	2 cut(s)	47, 158
ScrFI	CCNGG	1 cut(s)	156
SduI	GDGCHC	2 cut(s)	18, 799
SfcI	CTRYAG	1 cut(s)	578
Sfr274I	CTCGAG	1 cut(s)	798
SfuI	TTCGAA	1 cut(s)	26
SinI	GGWCC	1 cut(s)	47
SlaI	CTCGAG	1 cut(s)	798
SmlI	CTYRAG	3 cut(s)	110, 446, 798
SmoI	CTYRAG	3 cut(s)	110, 446, 798
Sse9I	AATT	3 cut(s)	477, 489, 763
SsiI	CCGC	4 cut(s)	322, 641, 666, 804
SstI	GAGCTC	1 cut(s)	18
StyD4I	CCNGG	1 cut(s)	154
TaiI	ACGT	1 cut(s)	289
TaqI	TCGA	6 cut(s)	18, 26, 278, 301, 469, 799
TasI	AATT	3 cut(s)	477, 489, 763
TatI	WGTACW	1 cut(s)	193
TauI	GCSGC	1 cut(s)	806
TfiI	GAWTC	5 cut(s)	260, 385, 520, 565, 682
Tru1I	TTAA	1 cut(s)	111
Tru9I	TTAA	1 cut(s)	111
TscAI	CASTG	4 cut(s)	259, 522, 556, 695
TseI	GCWGC	4 cut(s)	344, 419, 806, 809
TspDTI	ATGAA	5 cut(s)	179, 375, 578, 596, 662
TspGWI	ACGGA	1 cut(s)	24
TspRI	CASTG	4 cut(s)	259, 522, 556, 695
Vha464I	CTTAAG	1 cut(s)	110
VpaK11BI	GGWCC	1 cut(s)	47
XagI	CCTNNNNNAGG	1 cut(s)	110
XhoI	CTCGAG	1 cut(s)	798
XmnI	GAANNNNTTC	1 cut(s)	309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.