Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014071

Physical Location & Seq

Genomic Coordinates Reverse (-)

18728823 .. 18732708

Gene Structure 3886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G194200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 453 bp

ATGGGTTCCGTTGCTGCAATGAAGGCCGTCGCCGTTCTCTTCTTCTTGTCTCTCTCCTTATTTGTTTGGGCCGACAAGGTGAAGGAAGTCAAGGAGTTGCAGATTGGTGTTAAGTATAAGCCAGAATCTTGTGAACTTCAAGCACGCAAAGGTGATAAAGTCAGGGTACACTATCGGGGGAAACTCACTGATGGAACTGTCTTTGATTCTAGTTTTGAAAGGGGCGATCCAATCTTTTTTGAGCTTGGGACTGGTCAAGTTATTAAAGGATGGGACCAAGGAATTCTGGGAATGTGCGTAGGTGAGAAGAGGAAGTTGAAAATTCCGGCAAAGCTTGGCTATGGAGAGCAGGGTTCTCCACCAACCATCCCAGGAGGCGCAACACTGATATTTGACACGGAGCTCGTTGAAATTTTGGGAAGAGGATCGAAACCTAATGATGACGAGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

151

Amino Acids

16.39

Weight (kDa)

7.71

Isoelectric Point (pI)

20.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014071)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25220 AT5G48580
fragaria_vesca	FvH4_2g18170
malus_domestica	MD05G1166400.v1.1 MD10G1156400.v1.1
prunus_persica	Prupe.8G194200_v2.0.a1
pyrus_communis	pycom05g15500 pycom10g13460
rosa_chinensis	RchiOBHm_Chr6g0283551
rosa_laevigata	RLG00000012817
rosa_multiflora	Rmu_sc0005719.1_g000006 Rmu_sc0007194.1_g000003
rosa_roxburghii	Rroxscaffold_7G00185430
rosa_rugosa	Rorug06G0155700
rosa_samantha	Rh6BG270100 Rh6CG269900
rosa_wichuraiana	Rw6G023170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	2 cut(s)	221, 433
AcsI	RAATTY	3 cut(s)	282, 321, 411
AfaI	GTAC	1 cut(s)	168
AgsI	TTSAA	4 cut(s)	140, 218, 319, 410
AjnI	CCWGG	1 cut(s)	370
AluBI	AGCT	4 cut(s)	244, 334, 403, 448
AluI	AGCT	4 cut(s)	244, 334, 403, 448
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	1 cut(s)	54
AlwI	GGATC	2 cut(s)	221, 433
AoxI	GGCC	2 cut(s)	24, 69
ApeKI	GCWGC	1 cut(s)	14
ApoI	RAATTY	3 cut(s)	282, 321, 411
AspLEI	GCGC	1 cut(s)	380
AspS9I	GGNCC	2 cut(s)	69, 274
AsuHPI	GGTGA	3 cut(s)	91, 164, 314
AvaII	GGWCC	1 cut(s)	274
BanII	GRGCYC	1 cut(s)	405
Bbv12I	GWGCWC	1 cut(s)	405
BccI	CCATC	3 cut(s)	185, 264, 374
BceAI	ACGGC	2 cut(s)	11, 17
BciT130I	CCWGG	1 cut(s)	372
BcoDI	GTCTC	1 cut(s)	54
BfaI	CTAG	1 cut(s)	210
BfmI	CTRYAG	1 cut(s)	449
BisI	GCNGC	1 cut(s)	15
BlsI	GCNGC	1 cut(s)	16
Bme1390I	CCNGG	1 cut(s)	372
Bme18I	GGWCC	1 cut(s)	274
BmgT120I	GGNCC	2 cut(s)	69, 274
BmiI	GGNNCC	2 cut(s)	7, 275
BmrFI	CCNGG	1 cut(s)	372
BsaJI	CCNNGG	2 cut(s)	277, 370
Bse1I	ACTGG	1 cut(s)	256
Bse3DI	GCAATG	1 cut(s)	24
BseBI	CCWGG	1 cut(s)	372
BseDI	CCNNGG	2 cut(s)	277, 370
BseGI	GGATG	2 cut(s)	275, 366
BseMI	GCAATG	1 cut(s)	24
BseNI	ACTGG	1 cut(s)	256
BshFI	GGCC	2 cut(s)	26, 71
BsiHKAI	GWGCWC	1 cut(s)	405
BsiSI	CCGG	1 cut(s)	326
BslFI	GGGAC	2 cut(s)	262, 287
BsmAI	GTCTC	1 cut(s)	54
BsmFI	GGGAC	2 cut(s)	262, 287
BsnI	GGCC	2 cut(s)	26, 71
Bsp1286I	GDGCHC	1 cut(s)	405
Bsp143I	GATC	2 cut(s)	226, 425
BspANI	GGCC	2 cut(s)	26, 71
BspLI	GGNNCC	2 cut(s)	7, 275
BspPI	GGATC	2 cut(s)	221, 433
BsrDI	GCAATG	1 cut(s)	24
BsrI	ACTGG	1 cut(s)	256
BssECI	CCNNGG	2 cut(s)	277, 370
BssMI	GATC	2 cut(s)	226, 425
BssT1I	CCWWGG	1 cut(s)	277
Bst2UI	CCWGG	1 cut(s)	372
Bst4CI	ACNGT	1 cut(s)	199
Bst6I	CTCTTC	3 cut(s)	44, 302, 415
BstC8I	GCNNGC	1 cut(s)	145
BstF5I	GGATG	2 cut(s)	275, 366
BstHHI	GCGC	1 cut(s)	380
BstKTI	GATC	2 cut(s)	229, 428
BstMAI	GTCTC	1 cut(s)	54
BstMBI	GATC	2 cut(s)	226, 425
BstMWI	GCNNNNNNNGC	1 cut(s)	23
BstNI	CCWGG	1 cut(s)	372
BstSCI	CCNGG	1 cut(s)	370
BstSFI	CTRYAG	1 cut(s)	449
BsuRI	GGCC	2 cut(s)	26, 71
BtsCI	GGATG	2 cut(s)	275, 366
BtsIMutI	CAGTG	2 cut(s)	186, 383
Cac8I	GCNNGC	1 cut(s)	145
CfoI	GCGC	1 cut(s)	380
Cfr13I	GGNCC	2 cut(s)	69, 274
Csp6I	GTAC	1 cut(s)	167
CviJI	RGCY	8 cut(s)	26, 71, 121, 244, 334, 339, 403, 448
CviKI_1	RGCY	8 cut(s)	26, 71, 121, 244, 334, 339, 403, 448
CviQI	GTAC	1 cut(s)	167
DpnI	GATC	2 cut(s)	228, 427
DpnII	GATC	2 cut(s)	226, 425
Eam1104I	CTCTTC	3 cut(s)	44, 302, 415
EarI	CTCTTC	3 cut(s)	44, 302, 415
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	1 cut(s)	277
Eco24I	GRGCYC	1 cut(s)	405
Eco47I	GGWCC	1 cut(s)	274
Eco53kI	GAGCTC	1 cut(s)	403
EcoICRI	GAGCTC	1 cut(s)	403
EcoRI	GAATTC	1 cut(s)	282
EcoRII	CCWGG	1 cut(s)	370
EcoT14I	CCWWGG	1 cut(s)	277
EcoT38I	GRGCYC	1 cut(s)	405
ErhI	CCWWGG	1 cut(s)	277
FaiI	YATR	2 cut(s)	117, 342
FaqI	GGGAC	2 cut(s)	262, 287
Fnu4HI	GCNGC	1 cut(s)	15
FokI	GGATG	2 cut(s)	282, 353
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	1 cut(s)	15
FspBI	CTAG	1 cut(s)	210
GlaI	GCGC	1 cut(s)	379
GluI	GCNGC	1 cut(s)	15
HaeIII	GGCC	2 cut(s)	26, 71
HapII	CCGG	1 cut(s)	326
HhaI	GCGC	1 cut(s)	380
Hin6I	GCGC	1 cut(s)	378
HinP1I	GCGC	1 cut(s)	378
HindIII	AAGCTT	1 cut(s)	332
HinfI	GANTC	2 cut(s)	125, 206
HpaII	CCGG	1 cut(s)	326
HphI	GGTGA	3 cut(s)	91, 164, 314
Hpy166II	GTNNAC	2 cut(s)	134, 169
Hpy8I	GTNNAC	2 cut(s)	134, 169
Hpy99I	CGWCG	1 cut(s)	32
HpyAV	CCTTC	2 cut(s)	16, 76
HpyCH4III	ACNGT	1 cut(s)	199
HpyCH4V	TGCA	2 cut(s)	17, 100
HpyF10VI	GCNNNNNNNGC	1 cut(s)	23
HspAI	GCGC	1 cut(s)	378
Kzo9I	GATC	2 cut(s)	226, 425
LmnI	GCTCC	1 cut(s)	400
LpnPI	CCDG	8 cut(s)	135, 148, 237, 272, 335, 339, 357, 384
MaeI	CTAG	1 cut(s)	210
MalI	GATC	2 cut(s)	228, 427
MboI	GATC	2 cut(s)	226, 425
MboII	GAAGA	4 cut(s)	31, 34, 319, 432
MhlI	GDGCHC	1 cut(s)	405
MluCI	AATT	3 cut(s)	282, 321, 411
MnlI	CCTC	3 cut(s)	303, 368, 416
MseI	TTAA	2 cut(s)	111, 264
MspI	CCGG	1 cut(s)	326
MspR9I	CCNGG	1 cut(s)	372
MvaI	CCWGG	1 cut(s)	372
MwoI	GCNNNNNNNGC	1 cut(s)	23
NdeII	GATC	2 cut(s)	226, 425
NlaIV	GGNNCC	2 cut(s)	7, 275
PfeI	GAWTC	2 cut(s)	125, 206
PkrI	GCNGC	1 cut(s)	16
Psp124BI	GAGCTC	1 cut(s)	405
Psp6I	CCWGG	1 cut(s)	370
PspGI	CCWGG	1 cut(s)	370
PspN4I	GGNNCC	2 cut(s)	7, 275
PspPI	GGNCC	2 cut(s)	69, 274
RsaI	GTAC	1 cut(s)	168
RsaNI	GTAC	1 cut(s)	167
SacI	GAGCTC	1 cut(s)	405
SaqAI	TTAA	2 cut(s)	111, 264
SatI	GCNGC	1 cut(s)	15
Sau3AI	GATC	2 cut(s)	226, 425
Sau96I	GGNCC	2 cut(s)	69, 274
ScrFI	CCNGG	1 cut(s)	372
SduI	GDGCHC	1 cut(s)	405
SetI	ASST	8 cut(s)	81, 154, 246, 304, 336, 405, 436, 450
SfcI	CTRYAG	1 cut(s)	449
SinI	GGWCC	1 cut(s)	274
Sse9I	AATT	3 cut(s)	282, 321, 411
SspMI	CTAG	1 cut(s)	210
SstI	GAGCTC	1 cut(s)	405
StyD4I	CCNGG	1 cut(s)	370
StyI	CCWWGG	1 cut(s)	277
TaaI	ACNGT	1 cut(s)	199
TaqI	TCGA	1 cut(s)	428
TasI	AATT	3 cut(s)	282, 321, 411
TfiI	GAWTC	2 cut(s)	125, 206
Tru1I	TTAA	2 cut(s)	111, 264
Tru9I	TTAA	2 cut(s)	111, 264
TscAI	CASTG	2 cut(s)	193, 390
TseI	GCWGC	1 cut(s)	14
TspDTI	ATGAA	1 cut(s)	35
TspGWI	ACGGA	1 cut(s)	413
TspRI	CASTG	2 cut(s)	193, 390
VpaK11BI	GGWCC	1 cut(s)	274
XapI	RAATTY	3 cut(s)	282, 321, 411
XspI	CTAG	1 cut(s)	210

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.