Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008250

Physical Location & Seq

Genomic Coordinates Reverse (-)

19068222 .. 19071921

Gene Structure 3700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G202200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGCTTTGGCTTGCCAGGAAGTTCCGCCGTGGACCTTAGGTGTTATTGTAGGAGCCTTTCTCGACCTTGCTCTGGCTTATTTCCTGCTATGTGTATCTGCTTTTGTGTTTTTTGCATCGAAGTTTTTGAAGATTTTTTGGGTTTATTTGCCATGTCCTTGTAATGGGTTCTTGGGGTATAGAAACCGTGATCTTTGCTTGCATAAGTTACTTATTGATGGGCCAGTTGCAAGGATCCGTGTTGTTCAGGAGTTGGTGAAGAGCAAGTTCCCTTTTGATGTTGTTTGGTCTAAGGATCAAAGGTCCAACTTGAATTTGAAATTGATTAGAGATGTGAATTGTGAGATTGGAGTTCAGGAGTTTGAAAGTGAAGCATATTCTAGTGCGTATTCAAGTCCAAAATTGCAAAATCTGGTTGATAGGGAAAGTGGGTATGATGCCAAGGGGAAGAGGATTATGGTTCTAAAGAAAAGGCCTGGAATTCGGCGCTCTAGGAGGGCTGCTCCTGAATATGGAAAGCTTCCTTCGCCATTGTCAAATGATAGTTTGAAGTCAGCTGCTCGTATATTCCCCTTTCCATGTGATGACAGATATACAAGAGAGACATCTGGTGAAAGCTCAGTTGCCGTAGCTGGGAGAGAAGATGGTTCTCAGGATGATGTGAAAGCACCAACTGGAGATAATATGGAGGAATGCCAAACTTCTAAGTTGAGTGGACCAGCCGGTGAGAGTAAGGGTGTGGACATAAAAGAAAAGGCTCCTATTGTTGGAAACGAAATGGATACAATCAGGATATTGCAAGAAGCACTGCAAAAAGAGAAAGCTTCTTGTGCTGCTCTTTATCTGGAGCTAGAGAAAGAGCGAGGTGCTGCTGCAACTGCTGCTGATGAAGCGATGGCCATGATATCTCGTCTGCAAAAGGATAAAGCATCAATAGAAATGGAAGTGAGACAGTACCAAAGGATGATAGAAGAAAAGTTTGTTTATGATGAAGAGGAGATGGATGTTCTGAAAGAGATTCTTCTTAGTAGGGAGAAGGAGAACCATTTCTTGGAGAAGGAAGTTGAAGCATATAGGCAGATGTGCTTTTCAGGAAAAGAACAATGTAATGGTGATTTGAGTGGTATGTTGCGTGAATTGGGACAAAAGCCTTCTCCTTCATTTAATACAGATCCTCTAATGATGCTGCAGCAGACTGATGATACTAAATATAACTGTAAGAAATTCGGAGGTATTGCATATAGTACTTCTGAATATGAGGCTTCATTTGTTGAAAAACAAATCCATCATAATGGGCATGGTTCAATTGAGAAATGTGTTATTTCAGCCAGGGAAGAAAAAGTACACACGGATGATGTAATGTACCAAGGAATGACCACTCAACCATCCCAGGAGAATATTGATATTGAGAAAAACTTATATTCTGATGATGAAGAGCAGCAGCAACGTGGGAATCTTGAGAGCAATTTGCATAGTTCAATGCTTGATACAGAGCCAGCTGTTTATGATGTTCATGTCATTGATGGTAAAACTGAACTTTGGAAAGAAGAAAGTAAATCATCAATTTATACTGCATTGGATGGATACCAGGATTTGACTCCTACATTTGGAGCTTCTGCAAGCAGTGAGTTAGTACAAGCTTTTCCAAGCACAAGCCGGGTAGATACTGAACCTAAAATTAATACAAGTTCTTTGGAAATGCGTTGTGGGTTACCAATGTTGGATAACTCCCAATGCAAAACCTTGGTCATTGACTCAACGAAGAATTGTTTGCCTGCAGTAAATAGTGAAAGGTGGAAGATTGACACTGAGGTTGAACTTACAAATGCTAGAAGAGATAAAAGAGAAGTTAGCTTCCTCTTCCTCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zein-binding

Protein Analysis

624

Amino Acids

70.23

Weight (kDa)

5.11

Isoelectric Point (pI)

46.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008250)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13160
fragaria_vesca	FvH4_2g19000 FvH4_2g19000 FvH4_2g19000 FvH4_2g19000 FvH4_2g19000 FvH4_2g19000
malus_domestica	MD05G1174700.v1.1 MD10G1163900.v1.1
prunus_persica	Prupe.8G202200_v2.0.a1 Prupe.8G202200_v2.0.a1
pyrus_communis	pycom05g16160 pycom10g14130
rosa_chinensis	RchiOBHm_Chr6g0284791
rosa_laevigata	RLG00000012719
rosa_multiflora	Rmu_sc0000686.1_g000006
rosa_roxburghii	Rroxscaffold_7G00184360
rosa_rugosa	Rorug06G0166900
rosa_samantha	Rh6AG279500 Rh6BG279700 Rh6CG281900 Rh6DG274800
rosa_wichuraiana	Rw6G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1051
AciI	CCGC	1 cut(s)	26
AclWI	GGATC	4 cut(s)	229, 242, 303, 1166
AcoI	YGGCCR	1 cut(s)	897
AcsI	RAATTY	3 cut(s)	313, 480, 1223
AfaI	GTAC	5 cut(s)	956, 1246, 1344, 1364, 1635
AfiI	CCNNNNNNNGG	7 cut(s)	73, 164, 512, 633, 767, 1051, 1607
AjnI	CCWGG	5 cut(s)	15, 475, 1328, 1389, 1587
AjuI	GAANNNNNNNTTGG	2 cut(s)	1034, 1066
Alw26I	GTCTC	2 cut(s)	596, 943
AlwI	GGATC	4 cut(s)	229, 242, 303, 1166
AoxI	GGCC	3 cut(s)	221, 473, 897
ApoI	RAATTY	3 cut(s)	313, 480, 1223
ArsI	GACNNNNNNTTYG	2 cut(s)	1731, 1763
AseI	ATTAAT	1 cut(s)	1680
Asp700I	GAANNNNTTC	1 cut(s)	1046
AspLEI	GCGC	1 cut(s)	489
AspS9I	GGNCC	4 cut(s)	33, 221, 303, 716
AsuC2I	CCSGG	1 cut(s)	1658
AsuHPI	GGTGA	4 cut(s)	268, 623, 737, 1124
AvaII	GGWCC	3 cut(s)	33, 303, 716
AxyI	CCTNAGG	1 cut(s)	37
BalI	TGGCCA	1 cut(s)	899
BamHI	GGATCC	1 cut(s)	234
BarI	GAAGNNNNNNTAC	2 cut(s)	1326, 1358
BccI	CCATC	8 cut(s)	212, 638, 889, 994, 1293, 1393, 1517, 1574
BceAI	ACGGC	2 cut(s)	13, 611
BciT130I	CCWGG	5 cut(s)	17, 477, 1330, 1391, 1589
BciVI	GTATCC	2 cut(s)	775, 1577
BcnI	CCSGG	1 cut(s)	1658
BcoDI	GTCTC	2 cut(s)	596, 943
BfaI	CTAG	4 cut(s)	381, 492, 851, 1830
BfmI	CTRYAG	2 cut(s)	1187, 1776
BfoI	RGCGCY	1 cut(s)	490
BfuI	GTATCC	2 cut(s)	775, 1577
BmcAI	AGTACT	1 cut(s)	1246
Bme1390I	CCNGG	6 cut(s)	17, 477, 1330, 1391, 1589, 1658
Bme18I	GGWCC	3 cut(s)	33, 303, 716
BmgT120I	GGNCC	4 cut(s)	33, 221, 303, 716
BmiI	GGNNCC	3 cut(s)	55, 236, 759
BmrFI	CCNGG	6 cut(s)	17, 477, 1330, 1391, 1589, 1658
BmsI	GCATC	4 cut(s)	125, 427, 938, 1173
BplI	GAGNNNNNCTC	4 cut(s)	45, 77, 487, 519
BpmI	CTGGAG	2 cut(s)	696, 866
BpuEI	CTTGAG	1 cut(s)	1478
BpuMI	CCSGG	1 cut(s)	1658
BsaJI	CCNNGG	6 cut(s)	29, 441, 1329, 1366, 1389, 1743
Bsc4I	CCNNNNNNNGG	7 cut(s)	73, 164, 512, 633, 767, 1051, 1607
Bse118I	RCCGGY	1 cut(s)	722
Bse1I	ACTGG	2 cut(s)	224, 679
Bse21I	CCTNAGG	1 cut(s)	37
BseBI	CCWGG	5 cut(s)	17, 477, 1330, 1391, 1589
BseDI	CCNNGG	6 cut(s)	29, 441, 1329, 1366, 1389, 1743
BseGI	GGATG	6 cut(s)	661, 969, 1009, 1357, 1385, 1585
BseLI	CCNNNNNNNGG	7 cut(s)	73, 164, 512, 633, 767, 1051, 1607
BseMII	CTCAG	3 cut(s)	633, 665, 1800
BseNI	ACTGG	2 cut(s)	224, 679
BseRI	GAGGAG	1 cut(s)	1010
BseYI	CCCAGC	1 cut(s)	632
BshFI	GGCC	3 cut(s)	223, 475, 899
BsiSI	CCGG	2 cut(s)	723, 1657
BslFI	GGGAC	1 cut(s)	1155
BslI	CCNNNNNNNGG	7 cut(s)	73, 164, 512, 633, 767, 1051, 1607
BsmAI	GTCTC	2 cut(s)	596, 943
BsmFI	GGGAC	1 cut(s)	1155
BsmI	GAATGC	1 cut(s)	698
BsnI	GGCC	3 cut(s)	223, 475, 899
Bsp143I	GATC	4 cut(s)	190, 234, 295, 1171
BspACI	CCGC	1 cut(s)	26
BspANI	GGCC	3 cut(s)	223, 475, 899
BspCNI	CTCAG	3 cut(s)	632, 664, 1801
BspLI	GGNNCC	3 cut(s)	55, 236, 759
BspMAI	CTGCAG	2 cut(s)	1191, 1780
BspPI	GGATC	4 cut(s)	229, 242, 303, 1166
BspQI	GCTCTTC	2 cut(s)	254, 1428
BsrFI	RCCGGY	1 cut(s)	722
BsrI	ACTGG	2 cut(s)	224, 679
BssAI	RCCGGY	1 cut(s)	722
BssECI	CCNNGG	6 cut(s)	29, 441, 1329, 1366, 1389, 1743
BssMI	GATC	4 cut(s)	190, 234, 295, 1171
BssT1I	CCWWGG	3 cut(s)	441, 1366, 1743
Bst2UI	CCWGG	5 cut(s)	17, 477, 1330, 1391, 1589
Bst4CI	ACNGT	3 cut(s)	188, 954, 1217
Bst6I	CTCTTC	6 cut(s)	254, 443, 987, 1428, 1828, 1865
BstAPI	GCANNNNNTGC	1 cut(s)	881
BstC8I	GCNNGC	5 cut(s)	13, 200, 1497, 1621, 1776
BstDEI	CTNAG	7 cut(s)	37, 291, 619, 651, 705, 1025, 1809
BstDSI	CCRYGG	1 cut(s)	29
BstEII	GGTNACC	1 cut(s)	1710
BstF5I	GGATG	6 cut(s)	661, 969, 1009, 1357, 1385, 1585
BstH2I	RGCGCY	1 cut(s)	490
BstHHI	GCGC	1 cut(s)	489
BstKTI	GATC	4 cut(s)	193, 237, 298, 1174
BstMAI	GTCTC	2 cut(s)	596, 943
BstMBI	GATC	4 cut(s)	190, 234, 295, 1171
BstMWI	GCNNNNNNNGC	5 cut(s)	526, 830, 878, 881, 890
BstNI	CCWGG	5 cut(s)	17, 477, 1330, 1391, 1589
BstPI	GGTNACC	1 cut(s)	1710
BstSCI	CCNGG	6 cut(s)	15, 475, 1328, 1389, 1587, 1656
BstSFI	CTRYAG	2 cut(s)	1187, 1776
BstX2I	RGATCY	2 cut(s)	234, 1171
BstXI	CCANNNNNNTGG	1 cut(s)	1292
BstYI	RGATCY	2 cut(s)	234, 1171
Bsu36I	CCTNAGG	1 cut(s)	37
BsuI	GTATCC	2 cut(s)	775, 1577
BsuRI	GGCC	3 cut(s)	223, 475, 899
BtgI	CCRYGG	1 cut(s)	29
BtgZI	GCGATG	1 cut(s)	908
BtsCI	GGATG	6 cut(s)	661, 969, 1009, 1357, 1385, 1585
BtsI	GCAGTG	2 cut(s)	806, 1630
BtsIMutI	CAGTG	3 cut(s)	806, 1630, 1806
Cac8I	GCNNGC	5 cut(s)	13, 200, 1497, 1621, 1776
CfoI	GCGC	1 cut(s)	489
Cfr10I	RCCGGY	1 cut(s)	722
Cfr13I	GGNCC	4 cut(s)	33, 221, 303, 716
Csp6I	GTAC	5 cut(s)	955, 1245, 1343, 1363, 1634
CviAII	CATG	5 cut(s)	153, 579, 901, 1298, 1514
CviQI	GTAC	5 cut(s)	955, 1245, 1343, 1363, 1634
DdeI	CTNAG	7 cut(s)	37, 291, 619, 651, 705, 1025, 1809
DpnI	GATC	4 cut(s)	192, 236, 297, 1173
DpnII	GATC	4 cut(s)	190, 234, 295, 1171
EaeI	YGGCCR	1 cut(s)	897
Eam1104I	CTCTTC	6 cut(s)	254, 443, 987, 1428, 1828, 1865
EarI	CTCTTC	6 cut(s)	254, 443, 987, 1428, 1828, 1865
EciI	GGCGGA	1 cut(s)	15
Eco130I	CCWWGG	3 cut(s)	441, 1366, 1743
Eco147I	AGGCCT	1 cut(s)	475
Eco32I	GATATC	1 cut(s)	906
Eco47I	GGWCC	3 cut(s)	33, 303, 716
Eco81I	CCTNAGG	1 cut(s)	37
Eco91I	GGTNACC	1 cut(s)	1710
EcoO65I	GGTNACC	1 cut(s)	1710
EcoRI	GAATTC	1 cut(s)	480
EcoRII	CCWGG	5 cut(s)	15, 475, 1328, 1389, 1587
EcoRV	GATATC	1 cut(s)	906
EcoT14I	CCWWGG	3 cut(s)	441, 1366, 1743
ErhI	CCWWGG	3 cut(s)	441, 1366, 1743
FaeI	CATG	5 cut(s)	156, 582, 904, 1301, 1517
FalI	AAGNNNNNCTT	2 cut(s)	1005, 1037
FaqI	GGGAC	1 cut(s)	1155
FatI	CATG	5 cut(s)	152, 578, 900, 1297, 1513
FokI	GGATG	6 cut(s)	668, 976, 1016, 1364, 1372, 1592
FspBI	CTAG	4 cut(s)	381, 492, 851, 1830
GlaI	GCGC	1 cut(s)	488
GsaI	CCCAGC	1 cut(s)	636
GsuI	CTGGAG	2 cut(s)	696, 866
HaeII	RGCGCY	1 cut(s)	490
HaeIII	GGCC	3 cut(s)	223, 475, 899
HapII	CCGG	2 cut(s)	723, 1657
HhaI	GCGC	1 cut(s)	489
Hin1II	CATG	5 cut(s)	156, 582, 904, 1301, 1517
Hin6I	GCGC	1 cut(s)	487
HinP1I	GCGC	1 cut(s)	487
HindIII	AAGCTT	3 cut(s)	518, 822, 1638
HinfI	GANTC	4 cut(s)	1018, 1453, 1597, 1754
HpaII	CCGG	2 cut(s)	723, 1657
HphI	GGTGA	4 cut(s)	268, 623, 737, 1124
Hpy166II	GTNNAC	4 cut(s)	33, 716, 742, 1345
Hpy188I	TCNGA	5 cut(s)	1011, 1229, 1252, 1426, 1871
Hpy188III	TCNNGA	9 cut(s)	62, 248, 356, 506, 653, 790, 845, 1092, 1457
Hpy8I	GTNNAC	4 cut(s)	33, 716, 742, 1345
HpyAV	CCTTC	5 cut(s)	534, 1030, 1051, 1161, 1167
HpyCH4III	ACNGT	3 cut(s)	188, 954, 1217
HpyCH4IV	ACGT	1 cut(s)	1447
HpyF10VI	GCNNNNNNNGC	5 cut(s)	526, 830, 878, 881, 890
HpyF3I	CTNAG	7 cut(s)	37, 291, 619, 651, 705, 1025, 1809
HpySE526I	ACGT	1 cut(s)	1447
Hsp92II	CATG	5 cut(s)	156, 582, 904, 1301, 1517
HspAI	GCGC	1 cut(s)	487
Kzo9I	GATC	4 cut(s)	190, 234, 295, 1171
LguI	GCTCTTC	2 cut(s)	254, 1428
LmnI	GCTCC	5 cut(s)	53, 508, 763, 847, 1610
LweI	GCATC	4 cut(s)	125, 427, 938, 1173
MaeI	CTAG	4 cut(s)	381, 492, 851, 1830
MaeII	ACGT	1 cut(s)	1447
MaeIII	GTNAC	2 cut(s)	207, 1710
MalI	GATC	4 cut(s)	192, 236, 297, 1173
MboI	GATC	4 cut(s)	190, 234, 295, 1171
MfeI	CAATTG	1 cut(s)	1305
MflI	RGATCY	2 cut(s)	234, 1171
MlsI	TGGCCA	1 cut(s)	899
MluNI	TGGCCA	1 cut(s)	899
MlyI	GAGTC	2 cut(s)	1591, 1748
MmeI	TCCRAC	3 cut(s)	330, 748, 1701
Mox20I	TGGCCA	1 cut(s)	899
MroXI	GAANNNNTTC	1 cut(s)	1046
MscI	TGGCCA	1 cut(s)	899
MseI	TTAA	2 cut(s)	1164, 1680
MslI	CAYNNNNRTG	2 cut(s)	1290, 1350
Msp20I	TGGCCA	1 cut(s)	899
MspA1I	CMGCKG	2 cut(s)	557, 1499
MspI	CCGG	2 cut(s)	723, 1657
MspR9I	CCNGG	6 cut(s)	17, 477, 1330, 1391, 1589, 1658
MunI	CAATTG	1 cut(s)	1305
Mva1269I	GAATGC	1 cut(s)	698
MvaI	CCWGG	5 cut(s)	17, 477, 1330, 1391, 1589
MwoI	GCNNNNNNNGC	5 cut(s)	526, 830, 878, 881, 890
NciI	CCSGG	1 cut(s)	1658
NdeII	GATC	4 cut(s)	190, 234, 295, 1171
NlaIII	CATG	5 cut(s)	156, 582, 904, 1301, 1517
NlaIV	GGNNCC	3 cut(s)	55, 236, 759
PceI	AGGCCT	1 cut(s)	475
PciSI	GCTCTTC	2 cut(s)	254, 1428
PctI	GAATGC	1 cut(s)	698
PdmI	GAANNNNTTC	1 cut(s)	1046
PfeI	GAWTC	2 cut(s)	1018, 1453
PflMI	CCANNNNNTGG	1 cut(s)	1051
PleI	GAGTC	2 cut(s)	1591, 1748
PpsI	GAGTC	2 cut(s)	1591, 1748
PshBI	ATTAAT	1 cut(s)	1680
Psp6I	CCWGG	5 cut(s)	15, 475, 1328, 1389, 1587
PspEI	GGTNACC	1 cut(s)	1710
PspFI	CCCAGC	1 cut(s)	632
PspGI	CCWGG	5 cut(s)	15, 475, 1328, 1389, 1587
PspN4I	GGNNCC	3 cut(s)	55, 236, 759
PspPI	GGNCC	4 cut(s)	33, 221, 303, 716
PstI	CTGCAG	2 cut(s)	1191, 1780
PsuI	RGATCY	2 cut(s)	234, 1171
PvuII	CAGCTG	2 cut(s)	557, 1499
RsaI	GTAC	5 cut(s)	956, 1246, 1344, 1364, 1635
RsaNI	GTAC	5 cut(s)	955, 1245, 1343, 1363, 1634
RseI	CAYNNNNRTG	2 cut(s)	1290, 1350
SapI	GCTCTTC	2 cut(s)	254, 1428
SaqAI	TTAA	2 cut(s)	1164, 1680
Sau3AI	GATC	4 cut(s)	190, 234, 295, 1171
Sau96I	GGNCC	4 cut(s)	33, 221, 303, 716
ScaI	AGTACT	1 cut(s)	1246
SchI	GAGTC	2 cut(s)	1591, 1748
ScrFI	CCNGG	6 cut(s)	17, 477, 1330, 1391, 1589, 1658
SfaNI	GCATC	4 cut(s)	125, 427, 938, 1173
SfcI	CTRYAG	2 cut(s)	1187, 1776
SinI	GGWCC	3 cut(s)	33, 303, 716
SmiMI	CAYNNNNRTG	2 cut(s)	1290, 1350
SmlI	CTYRAG	1 cut(s)	1457
SmoI	CTYRAG	1 cut(s)	1457
SseBI	AGGCCT	1 cut(s)	475
SsiI	CCGC	1 cut(s)	26
SspI	AATATT	1 cut(s)	1399
SspMI	CTAG	4 cut(s)	381, 492, 851, 1830
StuI	AGGCCT	1 cut(s)	475
StyD4I	CCNGG	6 cut(s)	15, 475, 1328, 1389, 1587, 1656
StyI	CCWWGG	3 cut(s)	441, 1366, 1743
TaaI	ACNGT	3 cut(s)	188, 954, 1217
TaiI	ACGT	1 cut(s)	1450
TaqI	TCGA	2 cut(s)	63, 119
TatI	WGTACW	3 cut(s)	1244, 1342, 1633
TfiI	GAWTC	2 cut(s)	1018, 1453
Tru1I	TTAA	2 cut(s)	1164, 1680
Tru9I	TTAA	2 cut(s)	1164, 1680
TscAI	CASTG	3 cut(s)	813, 1630, 1813
TspDTI	ATGAA	6 cut(s)	903, 1005, 1149, 1254, 1446, 1502
TspGWI	ACGGA	2 cut(s)	227, 1364
TspRI	CASTG	3 cut(s)	813, 1630, 1813
Van91I	CCANNNNNTGG	1 cut(s)	1051
VpaK11BI	GGWCC	3 cut(s)	33, 303, 716
VspI	ATTAAT	1 cut(s)	1680
XapI	RAATTY	3 cut(s)	313, 480, 1223
XmnI	GAANNNNTTC	1 cut(s)	1046
XspI	CTAG	4 cut(s)	381, 492, 851, 1830
ZrmI	AGTACT	1 cut(s)	1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.