Vacuolar protein sorting-associated protein 62
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04090 AT5G43950 |
| fragaria_vesca | FvH4_2g20520 FvH4_2g20520 |
| malus_domestica | MD05G1189000.v1.1 MD10G1176600.v1.1 |
| prunus_persica | Prupe.8G215600_v2.0.a1 |
| pyrus_communis | pycom05g17360 pycom10g15250 pycom12g14800 |
| rosa_chinensis | RchiOBHm_Chr6g0286641 RchiOBHm_Chr6g0286661 |
| rosa_laevigata | RLG00000012553 |
| rosa_multiflora | Rmu_sc0000560.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00182130 Rroxscaffold_7G00182960 |
| rosa_rugosa | Rorug06G0181800 |
| rosa_samantha | Rh6AG294400 Rh6BG297800 Rh6CG298100 Rh6CG298200 Rh6DG290000 Rh6DG290100 |
| rosa_wichuraiana | Rw6G025340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 225, 1013 |
| Acc36I | ACCTGC | 1 cut(s) | 191 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1067 |
| AccI | GTMKAC | 2 cut(s) | 843, 1317 |
| AciI | CCGC | 4 cut(s) | 233, 933, 1204, 1257 |
| AclWI | GGATC | 2 cut(s) | 74, 729 |
| AcoI | YGGCCR | 2 cut(s) | 262, 967 |
| AcsI | RAATTY | 3 cut(s) | 429, 786, 1507 |
| AcuI | CTGAAG | 2 cut(s) | 492, 1352 |
| AfaI | GTAC | 4 cut(s) | 685, 893, 1292, 1541 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 107, 296, 416, 473, 953, 1067, 1115, 1355 |
| AgsI | TTSAA | 5 cut(s) | 626, 742, 874, 1114, 1548 |
| AjnI | CCWGG | 2 cut(s) | 100, 520 |
| AleI | CACNNNNGTG | 1 cut(s) | 1257 |
| Alw26I | GTCTC | 2 cut(s) | 634, 1470 |
| AlwI | GGATC | 2 cut(s) | 74, 729 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 59 |
| Ama87I | CYCGRG | 1 cut(s) | 1355 |
| AoxI | GGCC | 5 cut(s) | 95, 262, 321, 967, 1139 |
| ApeKI | GCWGC | 1 cut(s) | 1409 |
| ApoI | RAATTY | 3 cut(s) | 429, 786, 1507 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1613 |
| AspS9I | GGNCC | 7 cut(s) | 180, 812, 1118, 1139, 1526, 1652, 1661 |
| AsuC2I | CCSGG | 3 cut(s) | 368, 1356, 1357 |
| AsuHPI | GGTGA | 3 cut(s) | 116, 926, 1193 |
| AvaI | CYCGRG | 1 cut(s) | 1355 |
| AvaII | GGWCC | 6 cut(s) | 180, 812, 1118, 1526, 1652, 1661 |
| BalI | TGGCCA | 2 cut(s) | 264, 969 |
| BbvCI | CCTCAGC | 1 cut(s) | 462 |
| BbvI | GCAGC | 1 cut(s) | 1396 |
| BccI | CCATC | 6 cut(s) | 239, 410, 655, 859, 920, 959 |
| BciT130I | CCWGG | 2 cut(s) | 102, 522 |
| BclI | TGATCA | 1 cut(s) | 781 |
| BcnI | CCSGG | 3 cut(s) | 368, 1356, 1357 |
| BcoDI | GTCTC | 2 cut(s) | 634, 1470 |
| BfmI | CTRYAG | 2 cut(s) | 678, 694 |
| BfuAI | ACCTGC | 1 cut(s) | 191 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1501 |
| BisI | GCNGC | 2 cut(s) | 934, 1410 |
| BlsI | GCNGC | 2 cut(s) | 935, 1411 |
| Bme1390I | CCNGG | 5 cut(s) | 102, 368, 522, 1356, 1357 |
| Bme18I | GGWCC | 6 cut(s) | 180, 812, 1118, 1526, 1652, 1661 |
| BmeT110I | CYCGRG | 1 cut(s) | 1355 |
| BmgT120I | GGNCC | 7 cut(s) | 180, 812, 1118, 1139, 1526, 1652, 1661 |
| BmiI | GGNNCC | 3 cut(s) | 814, 1527, 1654 |
| BmrFI | CCNGG | 5 cut(s) | 102, 368, 522, 1356, 1357 |
| BmrI | ACTGGG | 1 cut(s) | 1195 |
| BmsI | GCATC | 4 cut(s) | 725, 1215, 1264, 1396 |
| BmuI | ACTGGG | 1 cut(s) | 1195 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1333, 1365 |
| BpmI | CTGGAG | 1 cut(s) | 84 |
| Bpu10I | CCTNAGC | 2 cut(s) | 462, 756 |
| BpuMI | CCSGG | 3 cut(s) | 368, 1356, 1357 |
| BsaI | GGTCTC | 1 cut(s) | 634 |
| BsaJI | CCNNGG | 3 cut(s) | 366, 521, 1355 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1467, 1497 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 107, 296, 416, 473, 953, 1067, 1115, 1355 |
| Bse1I | ACTGG | 4 cut(s) | 970, 1190, 1628, 1663 |
| Bse3DI | GCAATG | 3 cut(s) | 492, 1086, 1098 |
| BseBI | CCWGG | 2 cut(s) | 102, 522 |
| BseDI | CCNNGG | 3 cut(s) | 366, 521, 1355 |
| BseGI | GGATG | 4 cut(s) | 535, 829, 1149, 1351 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 107, 296, 416, 473, 953, 1067, 1115, 1355 |
| BseMI | GCAATG | 3 cut(s) | 492, 1086, 1098 |
| BseMII | CTCAG | 6 cut(s) | 104, 388, 476, 1455, 1482, 1545 |
| BseNI | ACTGG | 4 cut(s) | 970, 1190, 1628, 1663 |
| BseXI | GCAGC | 1 cut(s) | 1396 |
| BshFI | GGCC | 5 cut(s) | 97, 264, 323, 969, 1141 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1355 |
| BsiSI | CCGG | 2 cut(s) | 368, 1356 |
| BslFI | GGGAC | 3 cut(s) | 349, 1372, 1638 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 107, 296, 416, 473, 953, 1067, 1115, 1355 |
| BsmAI | GTCTC | 2 cut(s) | 634, 1470 |
| BsmBI | CGTCTC | 1 cut(s) | 1470 |
| BsmFI | GGGAC | 3 cut(s) | 349, 1372, 1638 |
| BsmI | GAATGC | 1 cut(s) | 774 |
| BsnI | GGCC | 5 cut(s) | 97, 264, 323, 969, 1141 |
| Bso31I | GGTCTC | 1 cut(s) | 634 |
| BsoBI | CYCGRG | 1 cut(s) | 1355 |
| Bsp1407I | TGTACA | 2 cut(s) | 891, 1539 |
| Bsp143I | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| BspACI | CCGC | 4 cut(s) | 233, 933, 1204, 1257 |
| BspANI | GGCC | 5 cut(s) | 97, 264, 323, 969, 1141 |
| BspCNI | CTCAG | 6 cut(s) | 103, 387, 475, 1456, 1483, 1546 |
| BspLI | GGNNCC | 3 cut(s) | 814, 1527, 1654 |
| BspMAI | CTGCAG | 1 cut(s) | 698 |
| BspMI | ACCTGC | 1 cut(s) | 191 |
| BspPI | GGATC | 2 cut(s) | 74, 729 |
| BspTNI | GGTCTC | 1 cut(s) | 634 |
| BsrDI | GCAATG | 3 cut(s) | 492, 1086, 1098 |
| BsrGI | TGTACA | 2 cut(s) | 891, 1539 |
| BsrI | ACTGG | 4 cut(s) | 970, 1190, 1628, 1663 |
| BssECI | CCNNGG | 3 cut(s) | 366, 521, 1355 |
| BssMI | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| Bst2UI | CCWGG | 2 cut(s) | 102, 522 |
| Bst4CI | ACNGT | 2 cut(s) | 299, 820 |
| Bst6I | CTCTTC | 2 cut(s) | 831, 997 |
| BstAUI | TGTACA | 2 cut(s) | 891, 1539 |
| BstC8I | GCNNGC | 1 cut(s) | 1342 |
| BstDEI | CTNAG | 8 cut(s) | 90, 374, 462, 756, 1157, 1464, 1491, 1554 |
| BstF5I | GGATG | 4 cut(s) | 535, 829, 1149, 1351 |
| BstKTI | GATC | 5 cut(s) | 82, 724, 784, 1000, 1167 |
| BstMAI | GTCTC | 2 cut(s) | 634, 1470 |
| BstMBI | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 270, 463, 1501 |
| BstNI | CCWGG | 2 cut(s) | 102, 522 |
| BstNSI | RCATGY | 3 cut(s) | 444, 1178, 1340 |
| BstSCI | CCNGG | 5 cut(s) | 100, 366, 520, 1354, 1355 |
| BstSFI | CTRYAG | 2 cut(s) | 678, 694 |
| BstV1I | GCAGC | 1 cut(s) | 1396 |
| BstX2I | RGATCY | 1 cut(s) | 721 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 260 |
| BstYI | RGATCY | 1 cut(s) | 721 |
| BsuRI | GGCC | 5 cut(s) | 97, 264, 323, 969, 1141 |
| BtgZI | GCGATG | 1 cut(s) | 591 |
| BtsCI | GGATG | 4 cut(s) | 535, 829, 1149, 1351 |
| BtsIMutI | CAGTG | 3 cut(s) | 98, 1608, 1656 |
| BveI | ACCTGC | 1 cut(s) | 191 |
| Cac8I | GCNNGC | 1 cut(s) | 1342 |
| CaiI | CAGNNNCTG | 1 cut(s) | 59 |
| Cfr13I | GGNCC | 7 cut(s) | 180, 812, 1118, 1139, 1526, 1652, 1661 |
| Cfr9I | CCCGGG | 1 cut(s) | 1355 |
| Csp6I | GTAC | 4 cut(s) | 684, 892, 1291, 1540 |
| CviAII | CATG | 7 cut(s) | 441, 864, 1019, 1052, 1175, 1337, 1497 |
| CviQI | GTAC | 4 cut(s) | 684, 892, 1291, 1540 |
| DdeI | CTNAG | 8 cut(s) | 90, 374, 462, 756, 1157, 1464, 1491, 1554 |
| DpnI | GATC | 5 cut(s) | 81, 723, 783, 999, 1166 |
| DpnII | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| DraI | TTTAAA | 2 cut(s) | 154, 1594 |
| EaeI | YGGCCR | 2 cut(s) | 262, 967 |
| Eam1104I | CTCTTC | 2 cut(s) | 831, 997 |
| EarI | CTCTTC | 2 cut(s) | 831, 997 |
| Eco31I | GGTCTC | 1 cut(s) | 634 |
| Eco47I | GGWCC | 6 cut(s) | 180, 812, 1118, 1526, 1652, 1661 |
| Eco57I | CTGAAG | 2 cut(s) | 492, 1352 |
| Eco88I | CYCGRG | 1 cut(s) | 1355 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1652 |
| EcoRII | CCWGG | 2 cut(s) | 100, 520 |
| EcoT22I | ATGCAT | 1 cut(s) | 1279 |
| Esp3I | CGTCTC | 1 cut(s) | 1470 |
| FaeI | CATG | 7 cut(s) | 444, 867, 1022, 1055, 1178, 1340, 1500 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 117, 149 |
| FaqI | GGGAC | 3 cut(s) | 349, 1372, 1638 |
| FatI | CATG | 7 cut(s) | 440, 863, 1018, 1051, 1174, 1336, 1496 |
| FauI | CCCGC | 1 cut(s) | 226 |
| FauNDI | CATATG | 1 cut(s) | 1279 |
| FbaI | TGATCA | 1 cut(s) | 781 |
| FblI | GTMKAC | 2 cut(s) | 843, 1317 |
| Fnu4HI | GCNGC | 2 cut(s) | 934, 1410 |
| FokI | GGATG | 4 cut(s) | 542, 816, 1136, 1338 |
| Fsp4HI | GCNGC | 2 cut(s) | 934, 1410 |
| GluI | GCNGC | 2 cut(s) | 934, 1410 |
| GsuI | CTGGAG | 1 cut(s) | 84 |
| HaeIII | GGCC | 5 cut(s) | 97, 264, 323, 969, 1141 |
| HapII | CCGG | 2 cut(s) | 368, 1356 |
| Hin1II | CATG | 7 cut(s) | 444, 867, 1022, 1055, 1178, 1340, 1500 |
| HindIII | AAGCTT | 1 cut(s) | 1382 |
| HinfI | GANTC | 5 cut(s) | 249, 406, 745, 751, 1433 |
| HpaII | CCGG | 2 cut(s) | 368, 1356 |
| HphI | GGTGA | 3 cut(s) | 116, 926, 1193 |
| Hpy166II | GTNNAC | 4 cut(s) | 844, 1318, 1334, 1540 |
| Hpy188I | TCNGA | 5 cut(s) | 40, 750, 1084, 1169, 1378 |
| Hpy188III | TCNNGA | 9 cut(s) | 120, 178, 410, 765, 779, 833, 1145, 1221, 1548 |
| Hpy8I | GTNNAC | 4 cut(s) | 844, 1318, 1334, 1540 |
| HpyAV | CCTTC | 9 cut(s) | 76, 101, 467, 626, 661, 1120, 1292, 1376, 1643 |
| HpyCH4III | ACNGT | 2 cut(s) | 299, 820 |
| HpyCH4V | TGCA | 7 cut(s) | 12, 440, 696, 1037, 1091, 1212, 1277 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 270, 463, 1501 |
| HpyF3I | CTNAG | 8 cut(s) | 90, 374, 462, 756, 1157, 1464, 1491, 1554 |
| Hsp92II | CATG | 7 cut(s) | 444, 867, 1022, 1055, 1178, 1340, 1500 |
| Ksp22I | TGATCA | 1 cut(s) | 781 |
| Kzo9I | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| LmnI | GCTCC | 3 cut(s) | 352, 881, 1189 |
| Lsp1109I | GCAGC | 1 cut(s) | 1396 |
| LweI | GCATC | 4 cut(s) | 725, 1215, 1264, 1396 |
| MaeIII | GTNAC | 6 cut(s) | 214, 476, 499, 698, 1181, 1486 |
| MalI | GATC | 5 cut(s) | 81, 723, 783, 999, 1166 |
| MboI | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| MboII | GAAGA | 6 cut(s) | 40, 754, 846, 848, 1014, 1684 |
| MfeI | CAATTG | 2 cut(s) | 1533, 1678 |
| MflI | RGATCY | 1 cut(s) | 721 |
| MlsI | TGGCCA | 2 cut(s) | 264, 969 |
| MluCI | AATT | 7 cut(s) | 429, 786, 1008, 1507, 1533, 1543, 1678 |
| MluNI | TGGCCA | 2 cut(s) | 264, 969 |
| MlyI | GAGTC | 1 cut(s) | 415 |
| MmeI | TCCRAC | 3 cut(s) | 1356, 1372, 1553 |
| Mox20I | TGGCCA | 2 cut(s) | 264, 969 |
| Mph1103I | ATGCAT | 1 cut(s) | 1279 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1613 |
| MscI | TGGCCA | 2 cut(s) | 264, 969 |
| MseI | TTAA | 4 cut(s) | 153, 557, 591, 1593 |
| MslI | CAYNNNNRTG | 4 cut(s) | 400, 1091, 1179, 1257 |
| Msp20I | TGGCCA | 2 cut(s) | 264, 969 |
| MspA1I | CMGCKG | 3 cut(s) | 233, 1257, 1463 |
| MspI | CCGG | 2 cut(s) | 368, 1356 |
| MspR9I | CCNGG | 5 cut(s) | 102, 368, 522, 1356, 1357 |
| MunI | CAATTG | 2 cut(s) | 1533, 1678 |
| Mva1269I | GAATGC | 1 cut(s) | 774 |
| MvaI | CCWGG | 2 cut(s) | 102, 522 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 270, 463, 1501 |
| NciI | CCSGG | 3 cut(s) | 368, 1356, 1357 |
| NdeI | CATATG | 1 cut(s) | 1279 |
| NdeII | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| NlaIII | CATG | 7 cut(s) | 444, 867, 1022, 1055, 1178, 1340, 1500 |
| NlaIV | GGNNCC | 3 cut(s) | 814, 1527, 1654 |
| NmuCI | GTSAC | 2 cut(s) | 499, 1181 |
| NsiI | ATGCAT | 1 cut(s) | 1279 |
| NspI | RCATGY | 3 cut(s) | 444, 1178, 1340 |
| OliI | CACNNNNGTG | 1 cut(s) | 1257 |
| PctI | GAATGC | 1 cut(s) | 774 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1613 |
| PfeI | GAWTC | 4 cut(s) | 249, 745, 751, 1433 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1067 |
| PkrI | GCNGC | 2 cut(s) | 935, 1411 |
| PleI | GAGTC | 1 cut(s) | 414 |
| PpsI | GAGTC | 1 cut(s) | 414 |
| PpuMI | RGGWCCY | 1 cut(s) | 1652 |
| PsiI | TTATAA | 2 cut(s) | 225, 1013 |
| Psp5II | RGGWCCY | 1 cut(s) | 1652 |
| Psp6I | CCWGG | 2 cut(s) | 100, 520 |
| PspGI | CCWGG | 2 cut(s) | 100, 520 |
| PspN4I | GGNNCC | 3 cut(s) | 814, 1527, 1654 |
| PspPI | GGNCC | 7 cut(s) | 180, 812, 1118, 1139, 1526, 1652, 1661 |
| PspPPI | RGGWCCY | 1 cut(s) | 1652 |
| PstI | CTGCAG | 1 cut(s) | 698 |
| PstNI | CAGNNNCTG | 1 cut(s) | 59 |
| PsuI | RGATCY | 1 cut(s) | 721 |
| PvuII | CAGCTG | 1 cut(s) | 1463 |
| RsaI | GTAC | 4 cut(s) | 685, 893, 1292, 1541 |
| RsaNI | GTAC | 4 cut(s) | 684, 892, 1291, 1540 |
| RseI | CAYNNNNRTG | 4 cut(s) | 400, 1091, 1179, 1257 |
| SaqAI | TTAA | 4 cut(s) | 153, 557, 591, 1593 |
| SatI | GCNGC | 2 cut(s) | 934, 1410 |
| Sau3AI | GATC | 5 cut(s) | 79, 721, 781, 997, 1164 |
| Sau96I | GGNCC | 7 cut(s) | 180, 812, 1118, 1139, 1526, 1652, 1661 |
| SchI | GAGTC | 1 cut(s) | 415 |
| ScrFI | CCNGG | 5 cut(s) | 102, 368, 522, 1356, 1357 |
| SfaNI | GCATC | 4 cut(s) | 725, 1215, 1264, 1396 |
| SfcI | CTRYAG | 2 cut(s) | 678, 694 |
| SinI | GGWCC | 6 cut(s) | 180, 812, 1118, 1526, 1652, 1661 |
| SmaI | CCCGGG | 1 cut(s) | 1357 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 400, 1091, 1179, 1257 |
| Sse9I | AATT | 7 cut(s) | 429, 786, 1008, 1507, 1533, 1543, 1678 |
| SsiI | CCGC | 4 cut(s) | 233, 933, 1204, 1257 |
| SspI | AATATT | 1 cut(s) | 1598 |
| StyD4I | CCNGG | 5 cut(s) | 100, 366, 520, 1354, 1355 |
| TaaI | ACNGT | 2 cut(s) | 299, 820 |
| TaqI | TCGA | 5 cut(s) | 547, 1000, 1146, 1325, 1436 |
| TasI | AATT | 7 cut(s) | 429, 786, 1008, 1507, 1533, 1543, 1678 |
| TatI | WGTACW | 3 cut(s) | 891, 1290, 1539 |
| TauI | GCSGC | 1 cut(s) | 936 |
| TfiI | GAWTC | 4 cut(s) | 249, 745, 751, 1433 |
| Tru1I | TTAA | 4 cut(s) | 153, 557, 591, 1593 |
| Tru9I | TTAA | 4 cut(s) | 153, 557, 591, 1593 |
| TscAI | CASTG | 3 cut(s) | 98, 1608, 1663 |
| TseFI | GTSAC | 2 cut(s) | 499, 1181 |
| TseI | GCWGC | 1 cut(s) | 1409 |
| Tsp45I | GTSAC | 2 cut(s) | 499, 1181 |
| TspDTI | ATGAA | 6 cut(s) | 163, 546, 779, 818, 852, 1040 |
| TspMI | CCCGGG | 1 cut(s) | 1355 |
| TspRI | CASTG | 3 cut(s) | 98, 1608, 1663 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1067 |
| VpaK11BI | GGWCC | 6 cut(s) | 180, 812, 1118, 1526, 1652, 1661 |
| XapI | RAATTY | 3 cut(s) | 429, 786, 1507 |
| XceI | RCATGY | 3 cut(s) | 444, 1178, 1340 |
| XmaI | CCCGGG | 1 cut(s) | 1355 |
| XmiI | GTMKAC | 2 cut(s) | 843, 1317 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1613 |
| Zsp2I | ATGCAT | 1 cut(s) | 1279 |