Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000560.1

Orthogroup ID

OG0007670

Physical Location & Seq

Genomic Coordinates Reverse (-)

37247 .. 45102

Gene Structure 7856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000560.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

atgttcttgtgcaagtgcttctattggaatcaactcaaagatttatttccaccagagcccgaacccttctccctgcctgctccaattcctcaatggcctccaggtgaaggttttgcttctggaaaaataagtattggagaaatagaggtttccaagatcaccagatttgaacgaatctgggcctgctctctgccagaggacaagaaaaaaacagttgcattttataagccagcaggaattcctgatggattccatagcatgggtcattattgccaactcaatggtaagcctttacacggctatgttcttgtggttcgagaagtagatttgccagaaacagctggtgttcaggagcatgtgaagtcagcagctcttcgagagccacttgattacacactggtgtggagccctgatgatgggaatgaggaaagttatggttcatgtggctacttttggttacctgatccacctgaaggttacagagcaatgggctttttagttaccaacaagccaggaaaacctgagttggatgaagtaaggtgtgttagagctgatttgactgacacatgcgaaactcacagcctactttttaataccagcatcaaatctgcaagtcttccttttcaagtttggactatgagaccacgtcatcggggaatgatgggaacaggggtctctgtaggtacatttttctgcagtagtcactggagtaatggacaagaactgcagattgggtgcttgaagaatctgaatcctatgctctctggaatgccaaatcttgatcaaattcattcacttatcaatcattatggacccactgttttctttcacccagaagaggtctacttgccatcttctgttgcctggttcttcaaaaatggagcgctattgtacaaaagtggcacagatgtaggcgaagcaattgatgaaagtggctcaaatttgcctggtggggggacaaatgataagcagttttggatagacttgcctagtggtgatcgaagaaagaatgtgatatatggaaacttggaaagtgcaaaactctacgttcatgtgaaaccagctcttggtgggacttttactgacattgcaatgtgggtattttgtccctttaatggaccagccactctcaaagtcggacctatggatatcgctctcagcaagattggacagcatgtgagtgactgggagcatttcacactccgaatatgcaactttactggagagctttgtagtatatactcctcacagcacagcggtggtcaatgggtagatgcatacgctttggagtacataagcgggaacaaagccattatctactcgacgaaaaatggacatgcaagctttccacatgctgggacttaccttcaggggtctgcaaagcttgggattggaattaggaatgatgctgctcgcagtgagttttctgtggattcaagccgccaatatgaagtagttgcggctgagtatcttggagatggagttgttactgagccaggttggctgcagtttatgagagaatggggtccaaaaattgtatacaattcaaggactgagatggataggatcatcaatgttttgcctgtgatgttgagatatcctgtggagaacatcttttcaaaaattccggttgagctttctggggaggaaggtcctacaggaccaaaggagaagaacaattgggtgggagatgaaagatgtgtggctgcttctgcgaaaactgtggatgaagggaagaccaaatggtttggtcgcaaggctgtgaattatcttttgattactgttactggcagcgtcgctttgagtgctcttgatgatcttattatttatcagagctgtagcagcaaggccatggagaaagccagtaaggacccagccattcgagatgctctaggggaacctcttttgaagggcccatggtacaatgcacagcttggagtagctcataagaggcaacctgtatcttgcaaatttcctgtgtatggatcaaaaggcacaggagttctcagcgtgaaggctgtacgtgatggagctcggggtgtgacggagcggcggagcttgccggacggacgtcacgggtcagacggacgggtctgcagtcggtggagtagccggcgacgtggttgcagccttgcccagaaacctgcagttgcaggtgagctcgctgcccagaaacctgcaactccgacctcctccgacctcgaacgctgcccagaaccgtccgccaagcctccgacctccatccgccaagccccgagcagctgtcgcagcctgaaacgccgccgctgcgtcgccgtccgcactttagcgtccgcttcaggaggagtgtataatcatgtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps62

Protein Analysis

780

Amino Acids

85.78

Weight (kDa)

8.34

Isoelectric Point (pI)

36.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007670)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04090 AT5G43950
fragaria_vesca	FvH4_2g20520 FvH4_2g20520
malus_domestica	MD05G1189000.v1.1 MD10G1176600.v1.1
prunus_persica	Prupe.8G215600_v2.0.a1
pyrus_communis	pycom05g17360 pycom10g15250 pycom12g14800
rosa_chinensis	RchiOBHm_Chr6g0286641 RchiOBHm_Chr6g0286661
rosa_laevigata	RLG00000012553
rosa_multiflora	Rmu_sc0000560.1_g000008
rosa_roxburghii	Rroxscaffold_7G00182130 Rroxscaffold_7G00182960
rosa_rugosa	Rorug06G0181800
rosa_samantha	Rh6AG294400 Rh6BG297800 Rh6CG298100 Rh6CG298200 Rh6DG290000 Rh6DG290100
rosa_wichuraiana	Rw6G025340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	225
AarI	CACCTGC	1 cut(s)	2144
AasI	GACNNNNNNGTC	1 cut(s)	2090
AatII	GACGTC	1 cut(s)	2074
Acc36I	ACCTGC	3 cut(s)	2144, 2152, 2185
AccB7I	CCANNNNNTGG	3 cut(s)	259, 1067, 1355
AccBSI	CCGCTC	1 cut(s)	2050
AccI	GTMKAC	2 cut(s)	843, 1539
AclWI	GGATC	3 cut(s)	458, 1574, 1993
AcsI	RAATTY	5 cut(s)	237, 786, 940, 1623, 1970
AcuI	CTGAAG	3 cut(s)	492, 1352, 2301
AcyI	GRCGYC	1 cut(s)	2071
AfaI	GTAC	5 cut(s)	685, 893, 1292, 1922, 2022
AfeI	AGCGCT	1 cut(s)	885
AgsI	TTSAA	8 cut(s)	170, 626, 742, 874, 1437, 1548, 1620, 1909
AjiI	CACGTC	2 cut(s)	647, 2120
AjnI	CCWGG	5 cut(s)	100, 511, 863, 946, 1495
AjuI	GAANNNNNNNTTGG	2 cut(s)	714, 746
AleI	CACNNNNGTG	3 cut(s)	398, 400, 1257
Alw21I	GWGCWC	3 cut(s)	1810, 2035, 2163
Alw26I	GTCTC	2 cut(s)	634, 679
AlwI	GGATC	3 cut(s)	458, 1574, 1993
Ama87I	CYCGRG	2 cut(s)	2034, 2254
Aor51HI	AGCGCT	1 cut(s)	885
AoxI	GGCC	4 cut(s)	95, 180, 1848, 1912
ApaI	GGGCCC	1 cut(s)	1916
ApoI	RAATTY	5 cut(s)	237, 786, 940, 1623, 1970
AspLEI	GCGC	1 cut(s)	886
AsuHPI	GGTGA	5 cut(s)	116, 151, 821, 1007, 2168
AvaI	CYCGRG	2 cut(s)	2034, 2254
AvaII	GGWCC	7 cut(s)	812, 1118, 1139, 1526, 1652, 1661, 1870
BaeGI	GKGCMC	1 cut(s)	1916
BanII	GRGCYC	5 cut(s)	60, 410, 1916, 2035, 2163
BbsI	GAAGAC	2 cut(s)	608, 1742
Bbv12I	GWGCWC	3 cut(s)	1810, 2035, 2163
BccI	CCATC	8 cut(s)	239, 410, 655, 859, 1472, 1552, 2021, 2249
BceAI	ACGGC	2 cut(s)	313, 2279
BcgI	CGANNNNNNTGC	2 cut(s)	2106, 2140
BciT130I	CCWGG	5 cut(s)	102, 513, 865, 948, 1497
BclI	TGATCA	1 cut(s)	781
BcoDI	GTCTC	2 cut(s)	634, 679
BfaI	CTAG	2 cut(s)	990, 1892
BfmI	CTRYAG	8 cut(s)	678, 694, 725, 1505, 1656, 1837, 2095, 2145
BfoI	RGCGCY	1 cut(s)	887
BfuAI	ACCTGC	3 cut(s)	2144, 2152, 2185
BglI	GCCNNNNNGGC	1 cut(s)	1501
Bme1390I	CCNGG	5 cut(s)	102, 513, 865, 948, 1497
Bme18I	GGWCC	7 cut(s)	812, 1118, 1139, 1526, 1652, 1661, 1870
BmeT110I	CYCGRG	2 cut(s)	2034, 2254
BmgBI	CACGTC	2 cut(s)	647, 2120
BmiI	GGNNCC	6 cut(s)	407, 814, 1527, 1872, 1899, 1914
BmrFI	CCNGG	5 cut(s)	102, 513, 865, 948, 1497
BmrI	ACTGGG	1 cut(s)	1195
BmsI	GCATC	4 cut(s)	609, 1264, 1396, 1876
BmuI	ACTGGG	1 cut(s)	1195
BoxI	GACNNNNGTC	1 cut(s)	2070
BpiI	GAAGAC	2 cut(s)	608, 1742
BpmI	CTGGAG	3 cut(s)	84, 727, 1242
BsaAI	YACGTR	1 cut(s)	2024
BsaHI	GRCGYC	1 cut(s)	2071
BsaI	GGTCTC	2 cut(s)	634, 679
BsaJI	CCNNGG	2 cut(s)	1851, 1916
BsaWI	WCCGGW	1 cut(s)	1627
BsaXI	ACNNNNNCTCC	2 cut(s)	1467, 1497
Bse118I	RCCGGY	1 cut(s)	2112
Bse1I	ACTGG	6 cut(s)	402, 710, 1190, 1225, 1792, 1863
Bse3DI	GCAATG	3 cut(s)	492, 1086, 1098
BseBI	CCWGG	5 cut(s)	102, 513, 865, 948, 1497
BseDI	CCNNGG	2 cut(s)	1851, 1916
BseGI	GGATG	3 cut(s)	535, 1732, 2241
BseMI	GCAATG	3 cut(s)	492, 1086, 1098
BseMII	CTCAG	6 cut(s)	513, 1171, 1455, 1482, 1545, 2020
BseNI	ACTGG	6 cut(s)	402, 710, 1190, 1225, 1792, 1863
BseRI	GAGGAG	3 cut(s)	1234, 2182, 2337
BseSI	GKGCMC	1 cut(s)	1916
BseYI	CCCAGC	2 cut(s)	1355, 1873
BshFI	GGCC	4 cut(s)	97, 182, 1850, 1914
BsiHKAI	GWGCWC	3 cut(s)	1810, 2035, 2163
BsiHKCI	CYCGRG	2 cut(s)	2034, 2254
BsiSI	CCGG	3 cut(s)	1628, 2063, 2113
BslFI	GGGAC	4 cut(s)	970, 1087, 1092, 1372
BsmAI	GTCTC	2 cut(s)	634, 679
BsmFI	GGGAC	4 cut(s)	970, 1087, 1092, 1372
BsmI	GAATGC	1 cut(s)	774
BsnI	GGCC	4 cut(s)	97, 182, 1850, 1914
Bso31I	GGTCTC	2 cut(s)	634, 679
BsoBI	CYCGRG	2 cut(s)	2034, 2254
Bsp120I	GGGCCC	1 cut(s)	1912
Bsp1286I	GDGCHC	6 cut(s)	60, 410, 1810, 1916, 2035, 2163
Bsp1407I	TGTACA	1 cut(s)	891
Bsp143I	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
Bsp19I	CCATGG	2 cut(s)	1851, 1916
BspANI	GGCC	4 cut(s)	97, 182, 1850, 1914
BspCNI	CTCAG	6 cut(s)	514, 1170, 1456, 1483, 1546, 2019
BspLI	GGNNCC	6 cut(s)	407, 814, 1527, 1872, 1899, 1914
BspMAI	CTGCAG	5 cut(s)	698, 729, 1509, 2099, 2149
BspMI	ACCTGC	3 cut(s)	2144, 2152, 2185
BspPI	GGATC	3 cut(s)	458, 1574, 1993
BspQI	GCTCTTC	1 cut(s)	378
BspTNI	GGTCTC	2 cut(s)	634, 679
BsrBI	CCGCTC	1 cut(s)	2050
BsrDI	GCAATG	3 cut(s)	492, 1086, 1098
BsrFI	RCCGGY	1 cut(s)	2112
BsrGI	TGTACA	1 cut(s)	891
BsrI	ACTGG	6 cut(s)	402, 710, 1190, 1225, 1792, 1863
BssAI	RCCGGY	1 cut(s)	2112
BssECI	CCNNGG	2 cut(s)	1851, 1916
BssMI	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
BssNAI	GTATAC	1 cut(s)	1540
BssNI	GRCGYC	1 cut(s)	2071
BssT1I	CCWWGG	2 cut(s)	1851, 1916
Bst1107I	GTATAC	1 cut(s)	1540
Bst2UI	CCWGG	5 cut(s)	102, 513, 865, 948, 1497
Bst4CI	ACNGT	5 cut(s)	214, 820, 1723, 1783, 2220
Bst6I	CTCTTC	2 cut(s)	378, 831
BstACI	GRCGYC	1 cut(s)	2071
BstAUI	TGTACA	1 cut(s)	891
BstBAI	YACGTR	1 cut(s)	2024
BstC8I	GCNNGC	8 cut(s)	78, 184, 231, 1342, 1414, 2060, 2114, 2163
BstDEI	CTNAG	6 cut(s)	522, 1157, 1464, 1491, 1554, 2006
BstDSI	CCRYGG	2 cut(s)	1851, 1916
BstEII	GGTNACC	1 cut(s)	456
BstF5I	GGATG	3 cut(s)	535, 1732, 2241
BstH2I	RGCGCY	1 cut(s)	887
BstHHI	GCGC	1 cut(s)	886
BstKTI	GATC	7 cut(s)	159, 466, 784, 1000, 1569, 1819, 1988
BstMAI	GTCTC	2 cut(s)	634, 679
BstMBI	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
BstMWI	GCNNNNNNNGC	9 cut(s)	1501, 1712, 1805, 1842, 2059, 2265, 2268, 2277, 2286
BstNI	CCWGG	5 cut(s)	102, 513, 865, 948, 1497
BstNSI	RCATGY	5 cut(s)	359, 570, 1178, 1340, 1355
BstPAI	GACNNNNGTC	1 cut(s)	2070
BstPI	GGTNACC	1 cut(s)	456
BstSCI	CCNGG	5 cut(s)	100, 511, 863, 946, 1495
BstSFI	CTRYAG	8 cut(s)	678, 694, 725, 1505, 1656, 1837, 2095, 2145
BstSLI	GKGCMC	1 cut(s)	1916
BstV2I	GAAGAC	2 cut(s)	608, 1742
BstXI	CCANNNNNNTGG	1 cut(s)	281
BstZ17I	GTATAC	1 cut(s)	1540
BsuRI	GGCC	4 cut(s)	97, 182, 1850, 1914
BtgI	CCRYGG	2 cut(s)	1851, 1916
BtrI	CACGTC	2 cut(s)	647, 2120
BtsCI	GGATG	3 cut(s)	535, 1732, 2241
BtsI	GCAGTG	1 cut(s)	1423
BtsIMutI	CAGTG	4 cut(s)	395, 703, 816, 1423
BveI	ACCTGC	3 cut(s)	2144, 2152, 2185
Cac8I	GCNNGC	8 cut(s)	78, 184, 231, 1342, 1414, 2060, 2114, 2163
CfoI	GCGC	1 cut(s)	886
Cfr10I	RCCGGY	1 cut(s)	2112
CseI	GACGC	3 cut(s)	1783, 2278, 2298
Csp6I	GTAC	5 cut(s)	684, 892, 1291, 1921, 2021
CviQI	GTAC	5 cut(s)	684, 892, 1291, 1921, 2021
DdeI	CTNAG	6 cut(s)	522, 1157, 1464, 1491, 1554, 2006
DpnI	GATC	7 cut(s)	158, 465, 783, 999, 1568, 1818, 1987
DpnII	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
DrdI	GACNNNNNNGTC	1 cut(s)	2090
DseDI	GACNNNNNNGTC	1 cut(s)	2090
Eam1104I	CTCTTC	2 cut(s)	378, 831
EarI	CTCTTC	2 cut(s)	378, 831
EciI	GGCGGA	3 cut(s)	2068, 2212, 2234
Ecl136II	GAGCTC	2 cut(s)	2033, 2161
Eco130I	CCWWGG	2 cut(s)	1851, 1916
Eco24I	GRGCYC	5 cut(s)	60, 410, 1916, 2035, 2163
Eco31I	GGTCTC	2 cut(s)	634, 679
Eco32I	GATATC	2 cut(s)	1150, 1598
Eco47I	GGWCC	7 cut(s)	812, 1118, 1139, 1526, 1652, 1661, 1870
Eco47III	AGCGCT	1 cut(s)	885
Eco53kI	GAGCTC	2 cut(s)	2033, 2161
Eco57I	CTGAAG	3 cut(s)	492, 1352, 2301
Eco88I	CYCGRG	2 cut(s)	2034, 2254
Eco91I	GGTNACC	1 cut(s)	456
EcoICRI	GAGCTC	2 cut(s)	2033, 2161
EcoO109I	RGGNCCY	3 cut(s)	1652, 1870, 1912
EcoO65I	GGTNACC	1 cut(s)	456
EcoRI	GAATTC	1 cut(s)	237
EcoRII	CCWGG	5 cut(s)	100, 511, 863, 946, 1495
EcoRV	GATATC	2 cut(s)	1150, 1598
EcoT14I	CCWWGG	2 cut(s)	1851, 1916
EcoT22I	ATGCAT	1 cut(s)	1279
EcoT38I	GRGCYC	5 cut(s)	60, 410, 1916, 2035, 2163
ErhI	CCWWGG	2 cut(s)	1851, 1916
FalI	AAGNNNNNCTT	2 cut(s)	604, 636
FaqI	GGGAC	4 cut(s)	970, 1087, 1092, 1372
FauI	CCCGC	1 cut(s)	1292
FbaI	TGATCA	1 cut(s)	781
FblI	GTMKAC	2 cut(s)	843, 1539
FokI	GGATG	3 cut(s)	542, 1739, 2228
FriOI	GRGCYC	5 cut(s)	60, 410, 1916, 2035, 2163
FspBI	CTAG	2 cut(s)	990, 1892
GlaI	GCGC	1 cut(s)	885
GsaI	CCCAGC	2 cut(s)	1359, 1877
GsuI	CTGGAG	3 cut(s)	84, 727, 1242
HaeII	RGCGCY	1 cut(s)	887
HaeIII	GGCC	4 cut(s)	97, 182, 1850, 1914
HapII	CCGG	3 cut(s)	1628, 2063, 2113
HgaI	GACGC	3 cut(s)	1783, 2278, 2298
HhaI	GCGC	1 cut(s)	886
Hin1I	GRCGYC	1 cut(s)	2071
Hin6I	GCGC	1 cut(s)	884
HinP1I	GCGC	1 cut(s)	884
HindIII	AAGCTT	2 cut(s)	1342, 1382
HinfI	GANTC	6 cut(s)	28, 174, 249, 745, 751, 1433
HpaII	CCGG	3 cut(s)	1628, 2063, 2113
HphI	GGTGA	5 cut(s)	116, 151, 821, 1007, 2168
Hpy166II	GTNNAC	2 cut(s)	844, 1540
Hpy188I	TCNGA	8 cut(s)	750, 1139, 1205, 1833, 2083, 2187, 2197, 2235
Hpy8I	GTNNAC	2 cut(s)	844, 1540
Hpy99I	CGWCG	4 cut(s)	1327, 1799, 2121, 2294
HpyAV	CCTTC	8 cut(s)	76, 101, 467, 1376, 1643, 1724, 1903, 2008
HpyCH4III	ACNGT	5 cut(s)	214, 820, 1723, 1783, 2220
HpyCH4IV	ACGT	5 cut(s)	646, 1047, 2023, 2071, 2119
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1501, 1712, 1805, 1842, 2059, 2265, 2268, 2277, 2286
HpyF3I	CTNAG	6 cut(s)	522, 1157, 1464, 1491, 1554, 2006
HpySE526I	ACGT	5 cut(s)	646, 1047, 2023, 2071, 2119
Hsp92I	GRCGYC	1 cut(s)	2071
HspAI	GCGC	1 cut(s)	884
KroI	GCCGGC	1 cut(s)	2112
KroNI	GCCGGC	1 cut(s)	2114
Ksp22I	TGATCA	1 cut(s)	781
Kzo9I	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	8 cut(s)	85, 352, 405, 881, 1189, 2030, 2047, 2055
LweI	GCATC	4 cut(s)	609, 1264, 1396, 1876
MaeI	CTAG	2 cut(s)	990, 1892
MaeII	ACGT	5 cut(s)	646, 1047, 2023, 2071, 2119
MaeIII	GTNAC	9 cut(s)	456, 476, 499, 701, 1181, 1486, 1783, 2041, 2072
MalI	GATC	7 cut(s)	158, 465, 783, 999, 1568, 1818, 1987
MbiI	CCGCTC	1 cut(s)	2050
MboI	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
MboII	GAAGA	9 cut(s)	365, 608, 754, 846, 848, 862, 1014, 1684, 1747
MfeI	CAATTG	2 cut(s)	921, 1678
MhlI	GDGCHC	6 cut(s)	60, 410, 1810, 1916, 2035, 2163
MmeI	TCCRAC	5 cut(s)	507, 1117, 2210, 2220, 2258
Mph1103I	ATGCAT	1 cut(s)	1279
MroNI	GCCGGC	1 cut(s)	2112
MseI	TTAA	2 cut(s)	591, 1113
MslI	CAYNNNNRTG	6 cut(s)	300, 398, 400, 1091, 1179, 1257
MspA1I	CMGCKG	4 cut(s)	341, 1257, 2262, 2286
MspI	CCGG	3 cut(s)	1628, 2063, 2113
MspR9I	CCNGG	5 cut(s)	102, 513, 865, 948, 1497
MunI	CAATTG	2 cut(s)	921, 1678
Mva1269I	GAATGC	1 cut(s)	774
MvaI	CCWGG	5 cut(s)	102, 513, 865, 948, 1497
MwoI	GCNNNNNNNGC	9 cut(s)	1501, 1712, 1805, 1842, 2059, 2265, 2268, 2277, 2286
NaeI	GCCGGC	1 cut(s)	2114
NcoI	CCATGG	2 cut(s)	1851, 1916
NdeII	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
NgoMIV	GCCGGC	1 cut(s)	2112
NlaIV	GGNNCC	6 cut(s)	407, 814, 1527, 1872, 1899, 1914
NmuCI	GTSAC	4 cut(s)	701, 1181, 2041, 2072
NsiI	ATGCAT	1 cut(s)	1279
NspI	RCATGY	5 cut(s)	359, 570, 1178, 1340, 1355
OliI	CACNNNNGTG	3 cut(s)	398, 400, 1257
PaqCI	CACCTGC	1 cut(s)	2144
PciSI	GCTCTTC	1 cut(s)	378
PctI	GAATGC	1 cut(s)	774
PdiI	GCCGGC	1 cut(s)	2114
PfeI	GAWTC	6 cut(s)	28, 174, 249, 745, 751, 1433
PflFI	GACNNNGTC	1 cut(s)	645
PflMI	CCANNNNNTGG	3 cut(s)	259, 1067, 1355
Ppu21I	YACGTR	1 cut(s)	2024
PpuMI	RGGWCCY	2 cut(s)	1652, 1870
PshAI	GACNNNNGTC	1 cut(s)	2070
PsiI	TTATAA	1 cut(s)	225
Psp124BI	GAGCTC	2 cut(s)	2035, 2163
Psp5II	RGGWCCY	2 cut(s)	1652, 1870
Psp6I	CCWGG	5 cut(s)	100, 511, 863, 946, 1495
PspEI	GGTNACC	1 cut(s)	456
PspFI	CCCAGC	2 cut(s)	1355, 1873
PspGI	CCWGG	5 cut(s)	100, 511, 863, 946, 1495
PspN4I	GGNNCC	6 cut(s)	407, 814, 1527, 1872, 1899, 1914
PspOMI	GGGCCC	1 cut(s)	1912
PspPPI	RGGWCCY	2 cut(s)	1652, 1870
PstI	CTGCAG	5 cut(s)	698, 729, 1509, 2099, 2149
PsyI	GACNNNGTC	1 cut(s)	645
PvuII	CAGCTG	2 cut(s)	341, 2262
RsaI	GTAC	5 cut(s)	685, 893, 1292, 1922, 2022
RsaNI	GTAC	5 cut(s)	684, 892, 1291, 1921, 2021
RseI	CAYNNNNRTG	6 cut(s)	300, 398, 400, 1091, 1179, 1257
SacI	GAGCTC	2 cut(s)	2035, 2163
SapI	GCTCTTC	1 cut(s)	378
SaqAI	TTAA	2 cut(s)	591, 1113
Sau3AI	GATC	7 cut(s)	156, 463, 781, 997, 1566, 1816, 1985
ScrFI	CCNGG	5 cut(s)	102, 513, 865, 948, 1497
SduI	GDGCHC	6 cut(s)	60, 410, 1810, 1916, 2035, 2163
SfaNI	GCATC	4 cut(s)	609, 1264, 1396, 1876
SfcI	CTRYAG	8 cut(s)	678, 694, 725, 1505, 1656, 1837, 2095, 2145
SinI	GGWCC	7 cut(s)	812, 1118, 1139, 1526, 1652, 1661, 1870
SmiMI	CAYNNNNRTG	6 cut(s)	300, 398, 400, 1091, 1179, 1257
SspMI	CTAG	2 cut(s)	990, 1892
SstI	GAGCTC	2 cut(s)	2035, 2163
StyD4I	CCNGG	5 cut(s)	100, 511, 863, 946, 1495
StyI	CCWWGG	2 cut(s)	1851, 1916
TaaI	ACNGT	5 cut(s)	214, 820, 1723, 1783, 2220
TaiI	ACGT	5 cut(s)	649, 1050, 2026, 2074, 2122
TaqI	TCGA	6 cut(s)	316, 376, 1000, 1322, 1882, 2202
TatI	WGTACW	2 cut(s)	891, 1290
TauI	GCSGC	5 cut(s)	1443, 1463, 2053, 2283, 2286
TfiI	GAWTC	6 cut(s)	28, 174, 249, 745, 751, 1433
Tru1I	TTAA	2 cut(s)	591, 1113
Tru9I	TTAA	2 cut(s)	591, 1113
TscAI	CASTG	4 cut(s)	402, 710, 823, 1423
TseFI	GTSAC	4 cut(s)	701, 1181, 2041, 2072
Tsp45I	GTSAC	4 cut(s)	701, 1181, 2041, 2072
TspDTI	ATGAA	8 cut(s)	429, 546, 779, 942, 1040, 1464, 1707, 1743
TspGWI	ACGGA	3 cut(s)	2060, 2082, 2100
TspRI	CASTG	4 cut(s)	402, 710, 823, 1423
Tth111I	GACNNNGTC	1 cut(s)	645
Van91I	CCANNNNNTGG	3 cut(s)	259, 1067, 1355
VpaK11BI	GGWCC	7 cut(s)	812, 1118, 1139, 1526, 1652, 1661, 1870
XapI	RAATTY	5 cut(s)	237, 786, 940, 1623, 1970
XceI	RCATGY	5 cut(s)	359, 570, 1178, 1340, 1355
XcmI	CCANNNNNNNNNTGG	1 cut(s)	90
XmiI	GTMKAC	2 cut(s)	843, 1539
XspI	CTAG	2 cut(s)	990, 1892
ZraI	GACGTC	1 cut(s)	2072
Zsp2I	ATGCAT	1 cut(s)	1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.