Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0013394

Physical Location & Seq

Genomic Coordinates Forward (+)

20639611 .. 20643744

Gene Structure 4134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G232100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGTCACTGAACATCCTTATTTTGTCCTTATATTGTTTGGGCGACGACAAGTTTCTCCTCTCTACTTCGTATTTTCTCAAAAACTCTCTCCTTTTACCGTTTTTTTTCTCTCTCTCTCTCTGGTTCTTTTGTGATTCGGCCATGGAGGTCTCTCTGTCTTCGGCAACCTCGAGAGGTTACACATATAACCCATCACCAGAGCCGTTTCTGCTTAAAAGAGTGAAACTTCCTACTTGGGATCGTCATTTATTGTCCCTCTCTCCAACCAGAGTAAGACCACAAACTTTATTTGTTCAAAAAGGACCCCACTCTGCCAAGGATAACTCGGTGAAGGTTGTATGTTGTCTAAAGAGGGAAGCTACCGTAGTCGTCGAGGGCAGGTGTATAGATGAAGTATATGATGCTTTGGCCGAACGCCTTGTTCCTACAGCAGCAGCAATGTCAAATCCAAATTTGAAGTATATTGTTGGTTTGGCTGGGTCTCCTGGATCTGGAAAGAGCACTATTGCATCTGAAGTAGCGCGACGTGTAAACAGATTATGGCCCCAGAAAGCTTGTGCATTGGATTCTCAAGTTAGTCCTCCAGACATGGCTGCAGTTATTCCCATGGATGGATTCCATCTTTATTGTTCCCAGCTGGATGCAATGGAGAATCCTGAGGAGGCTCATGCAAGAAGGGGAGCTCCATGGACCTTTAACCCTGAGCTACTACTCAAGTCTCTCAAGACTCTGAGAAGTCAGGGATCAGTTTATGCACCGTCATTTGACCATGGTGTTGGAGATCCAGTAGAAGATGATATCTTTGTGAGCCTTCAACATAAAGTGGTCATAGTAGAAGGAAATTATTTATTGTTAGATGATGGGATTTGGAAGGAAATATCAGCCATGTTCGATGAGAAGTGGTTTGTTGAGATTGACATTGATAAAGCTATGGAACGAGTTCGAATGAGACACATCTTAACGGGAAAGCCCCCAGATGTTGCTAAATGGCGGATTGAGTACAACGACCGGCCAAATGCCGAGAAAGTAAACAAATCAAAGAAGAATGCCGATTTGATAATTAGGTCAATCGACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_18 PRK

Protein Analysis

360

Amino Acids

40.39

Weight (kDa)

7.04

Isoelectric Point (pI)

47.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03030 AT1G03030
fragaria_vesca	FvH4_2g22511
malus_domestica	MD05G1205700.v1.1
prunus_persica	Prupe.8G232100_v2.0.a1
pyrus_communis	pycom05g19180
rosa_chinensis	RchiOBHm_Chr6g0289561
rosa_laevigata	RLG00000009408 RLG00000012293
rosa_multiflora	Rmu_sc0001527.1_g000059
rosa_roxburghii	Rroxscaffold_7G00177860
rosa_rugosa	Rorug06G0204400 Rorug06G0204500
rosa_samantha	Rh6AG316100 Rh6CG329100 Rh6DG314800
rosa_wichuraiana	Rw4G006720 Rw6G027260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	369
Acc36I	ACCTGC	1 cut(s)	369
AccII	CGCG	1 cut(s)	523
AciI	CCGC	1 cut(s)	991
AclWI	GGATC	4 cut(s)	246, 496, 751, 776
AcoI	YGGCCR	3 cut(s)	138, 408, 1010
AcsI	RAATTY	1 cut(s)	451
AcuI	CTGAAG	1 cut(s)	534
AfaI	GTAC	1 cut(s)	1001
AfiI	CCNNNNNNNGG	2 cut(s)	491, 611
AflIII	ACRYGT	1 cut(s)	526
AgsI	TTSAA	3 cut(s)	296, 457, 815
AjiI	CACGTC	1 cut(s)	527
AjnI	CCWGG	1 cut(s)	484
AluBI	AGCT	6 cut(s)	359, 554, 637, 683, 706, 929
AluI	AGCT	6 cut(s)	359, 554, 637, 683, 706, 929
Alw21I	GWGCWC	2 cut(s)	503, 685
Alw26I	GTCTC	4 cut(s)	154, 486, 723, 943
AlwI	GGATC	4 cut(s)	246, 496, 751, 776
Ama87I	CYCGRG	1 cut(s)	169
AoxI	GGCC	4 cut(s)	138, 408, 542, 1010
ApeKI	GCWGC	3 cut(s)	431, 434, 593
ApoI	RAATTY	1 cut(s)	451
Asp700I	GAANNNNTTC	1 cut(s)	939
AspLEI	GCGC	1 cut(s)	523
AspS9I	GGNCC	3 cut(s)	302, 543, 690
AsuHPI	GGTGA	2 cut(s)	186, 340
AsuII	TTCGAA	1 cut(s)	943
AvaI	CYCGRG	1 cut(s)	169
AvaII	GGWCC	2 cut(s)	302, 690
AxyI	CCTNAGG	1 cut(s)	657
BanII	GRGCYC	1 cut(s)	685
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	2 cut(s)	503, 685
BbvI	GCAGC	3 cut(s)	443, 446, 580
BccI	CCATC	4 cut(s)	199, 605, 627, 854
BceAI	ACGGC	1 cut(s)	187
BciT130I	CCWGG	1 cut(s)	486
BcoDI	GTCTC	4 cut(s)	154, 486, 723, 943
BfmI	CTRYAG	2 cut(s)	426, 594
BfuAI	ACCTGC	1 cut(s)	369
BisI	GCNGC	3 cut(s)	432, 435, 594
BlsI	GCNGC	3 cut(s)	433, 436, 595
Bme1390I	CCNGG	1 cut(s)	486
Bme18I	GGWCC	2 cut(s)	302, 690
BmeT110I	CYCGRG	1 cut(s)	169
BmgBI	CACGTC	1 cut(s)	527
BmgT120I	GGNCC	3 cut(s)	302, 543, 690
BmiI	GGNNCC	2 cut(s)	304, 545
BmrFI	CCNGG	1 cut(s)	486
BmsI	GCATC	3 cut(s)	391, 518, 631
BpiI	GAAGAC	1 cut(s)	150
BpmI	CTGGAG	1 cut(s)	567
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu14I	TTCGAA	1 cut(s)	943
BpuEI	CTTGAG	3 cut(s)	555, 698, 707
BsaI	GGTCTC	2 cut(s)	154, 486
BsaJI	CCNNGG	5 cut(s)	141, 315, 606, 686, 769
BsaXI	ACNNNNNCTCC	2 cut(s)	771, 801
Bsc4I	CCNNNNNNNGG	2 cut(s)	491, 611
Bse118I	RCCGGY	1 cut(s)	1008
Bse1I	ACTGG	1 cut(s)	785
Bse21I	CCTNAGG	1 cut(s)	657
Bse3DI	GCAATG	2 cut(s)	444, 651
BseBI	CCWGG	1 cut(s)	486
BseDI	CCNNGG	5 cut(s)	141, 315, 606, 686, 769
BseGI	GGATG	3 cut(s)	12, 616, 646
BseLI	CCNNNNNNNGG	2 cut(s)	491, 611
BseMI	GCAATG	2 cut(s)	444, 651
BseMII	CTCAG	3 cut(s)	648, 693, 722
BseNI	ACTGG	1 cut(s)	785
BseRI	GAGGAG	2 cut(s)	47, 674
BseXI	GCAGC	3 cut(s)	443, 446, 580
BseYI	CCCAGC	2 cut(s)	476, 633
Bsh1236I	CGCG	1 cut(s)	523
Bsh1285I	CGRYCG	1 cut(s)	1009
BshFI	GGCC	4 cut(s)	140, 410, 544, 1012
BsiEI	CGRYCG	1 cut(s)	1009
BsiHKAI	GWGCWC	2 cut(s)	503, 685
BsiHKCI	CYCGRG	1 cut(s)	169
BsiSI	CCGG	1 cut(s)	1009
BslFI	GGGAC	1 cut(s)	238
BslI	CCNNNNNNNGG	2 cut(s)	491, 611
BsmAI	GTCTC	4 cut(s)	154, 486, 723, 943
BsmFI	GGGAC	1 cut(s)	238
BsmI	GAATGC	1 cut(s)	1051
BsnI	GGCC	4 cut(s)	140, 410, 544, 1012
Bso31I	GGTCTC	2 cut(s)	154, 486
BsoBI	CYCGRG	1 cut(s)	169
Bsp119I	TTCGAA	1 cut(s)	943
Bsp1286I	GDGCHC	2 cut(s)	503, 685
Bsp143I	GATC	4 cut(s)	238, 488, 743, 781
Bsp19I	CCATGG	4 cut(s)	141, 606, 686, 769
BspACI	CCGC	1 cut(s)	991
BspANI	GGCC	4 cut(s)	140, 410, 544, 1012
BspCNI	CTCAG	3 cut(s)	649, 694, 723
BspFNI	CGCG	1 cut(s)	523
BspLI	GGNNCC	2 cut(s)	304, 545
BspMAI	CTGCAG	1 cut(s)	598
BspMI	ACCTGC	1 cut(s)	369
BspPI	GGATC	4 cut(s)	246, 496, 751, 776
BspT104I	TTCGAA	1 cut(s)	943
BspTNI	GGTCTC	2 cut(s)	154, 486
BsrDI	GCAATG	2 cut(s)	444, 651
BsrFI	RCCGGY	1 cut(s)	1008
BsrI	ACTGG	1 cut(s)	785
BssAI	RCCGGY	1 cut(s)	1008
BssECI	CCNNGG	5 cut(s)	141, 315, 606, 686, 769
BssMI	GATC	4 cut(s)	238, 488, 743, 781
BssT1I	CCWWGG	5 cut(s)	141, 315, 606, 686, 769
Bst2UI	CCWGG	1 cut(s)	486
Bst4CI	ACNGT	3 cut(s)	99, 364, 759
BstBI	TTCGAA	1 cut(s)	943
BstDEI	CTNAG	3 cut(s)	657, 702, 731
BstDSI	CCRYGG	4 cut(s)	141, 606, 686, 769
BstF5I	GGATG	3 cut(s)	12, 616, 646
BstFNI	CGCG	1 cut(s)	523
BstHHI	GCGC	1 cut(s)	523
BstKTI	GATC	4 cut(s)	241, 491, 746, 784
BstMAI	GTCTC	4 cut(s)	154, 486, 723, 943
BstMBI	GATC	4 cut(s)	238, 488, 743, 781
BstMCI	CGRYCG	1 cut(s)	1009
BstMWI	GCNNNNNNNGC	1 cut(s)	208
BstNI	CCWGG	1 cut(s)	486
BstSCI	CCNGG	1 cut(s)	484
BstSFI	CTRYAG	2 cut(s)	426, 594
BstUI	CGCG	1 cut(s)	523
BstV1I	GCAGC	3 cut(s)	443, 446, 580
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	2 cut(s)	488, 781
BstXI	CCANNNNNNTGG	1 cut(s)	776
BstYI	RGATCY	2 cut(s)	488, 781
Bsu36I	CCTNAGG	1 cut(s)	657
BsuRI	GGCC	4 cut(s)	140, 410, 544, 1012
BtgI	CCRYGG	4 cut(s)	141, 606, 686, 769
BtrI	CACGTC	1 cut(s)	527
BtsCI	GGATG	3 cut(s)	12, 616, 646
BtsIMutI	CAGTG	1 cut(s)	5
BveI	ACCTGC	1 cut(s)	369
CfoI	GCGC	1 cut(s)	523
Cfr10I	RCCGGY	1 cut(s)	1008
Cfr13I	GGNCC	3 cut(s)	302, 543, 690
Csp6I	GTAC	1 cut(s)	1000
CviAII	CATG	7 cut(s)	142, 589, 607, 668, 687, 770, 886
CviQI	GTAC	1 cut(s)	1000
DdeI	CTNAG	3 cut(s)	657, 702, 731
DpnI	GATC	4 cut(s)	240, 490, 745, 783
DpnII	GATC	4 cut(s)	238, 488, 743, 781
EaeI	YGGCCR	3 cut(s)	138, 408, 1010
EciI	GGCGGA	1 cut(s)	1006
Ecl136II	GAGCTC	1 cut(s)	683
Eco130I	CCWWGG	5 cut(s)	141, 315, 606, 686, 769
Eco24I	GRGCYC	1 cut(s)	685
Eco31I	GGTCTC	2 cut(s)	154, 486
Eco32I	GATATC	1 cut(s)	799
Eco47I	GGWCC	2 cut(s)	302, 690
Eco53kI	GAGCTC	1 cut(s)	683
Eco57I	CTGAAG	1 cut(s)	534
Eco81I	CCTNAGG	1 cut(s)	657
Eco88I	CYCGRG	1 cut(s)	169
EcoICRI	GAGCTC	1 cut(s)	683
EcoO109I	RGGNCCY	1 cut(s)	302
EcoRII	CCWGG	1 cut(s)	484
EcoRV	GATATC	1 cut(s)	799
EcoT14I	CCWWGG	5 cut(s)	141, 315, 606, 686, 769
EcoT38I	GRGCYC	1 cut(s)	685
ErhI	CCWWGG	5 cut(s)	141, 315, 606, 686, 769
FaeI	CATG	7 cut(s)	145, 592, 610, 671, 690, 773, 889
FaqI	GGGAC	1 cut(s)	238
FatI	CATG	7 cut(s)	141, 588, 606, 667, 686, 769, 885
Fnu4HI	GCNGC	3 cut(s)	432, 435, 594
FokI	GGATG	2 cut(s)	623, 653
FriOI	GRGCYC	1 cut(s)	685
Fsp4HI	GCNGC	3 cut(s)	432, 435, 594
GlaI	GCGC	1 cut(s)	522
GluI	GCNGC	3 cut(s)	432, 435, 594
GsaI	CCCAGC	2 cut(s)	480, 637
GsuI	CTGGAG	1 cut(s)	567
HaeIII	GGCC	4 cut(s)	140, 410, 544, 1012
HapII	CCGG	1 cut(s)	1009
HhaI	GCGC	1 cut(s)	523
Hin1II	CATG	7 cut(s)	145, 592, 610, 671, 690, 773, 889
Hin6I	GCGC	1 cut(s)	521
HinP1I	GCGC	1 cut(s)	521
HindIII	AAGCTT	1 cut(s)	552
HinfI	GANTC	5 cut(s)	134, 566, 615, 652, 727
HpaII	CCGG	1 cut(s)	1009
HphI	GGTGA	2 cut(s)	186, 340
Hpy166II	GTNNAC	2 cut(s)	532, 1030
Hpy188I	TCNGA	2 cut(s)	514, 732
Hpy188III	TCNNGA	5 cut(s)	171, 492, 584, 656, 724
Hpy8I	GTNNAC	2 cut(s)	532, 1030
Hpy99I	CGWCG	3 cut(s)	47, 374, 528
HpyAV	CCTTC	5 cut(s)	325, 669, 821, 830, 865
HpyCH4III	ACNGT	3 cut(s)	99, 364, 759
HpyCH4IV	ACGT	1 cut(s)	526
HpyCH4V	TGCA	6 cut(s)	509, 560, 596, 644, 671, 755
HpyF10VI	GCNNNNNNNGC	1 cut(s)	208
HpyF3I	CTNAG	3 cut(s)	657, 702, 731
HpySE526I	ACGT	1 cut(s)	526
Hsp92II	CATG	7 cut(s)	145, 592, 610, 671, 690, 773, 889
HspAI	GCGC	1 cut(s)	521
Kzo9I	GATC	4 cut(s)	238, 488, 743, 781
LmnI	GCTCC	2 cut(s)	680, 688
Lsp1109I	GCAGC	3 cut(s)	443, 446, 580
LweI	GCATC	3 cut(s)	391, 518, 631
MaeII	ACGT	1 cut(s)	526
MaeIII	GTNAC	2 cut(s)	3, 176
MalI	GATC	4 cut(s)	240, 490, 745, 783
MboI	GATC	4 cut(s)	238, 488, 743, 781
MboII	GAAGA	3 cut(s)	150, 803, 1054
MflI	RGATCY	2 cut(s)	488, 781
MhlI	GDGCHC	2 cut(s)	503, 685
MluCI	AATT	3 cut(s)	451, 841, 1059
MlyI	GAGTC	1 cut(s)	721
MmeI	TCCRAC	2 cut(s)	287, 757
MroXI	GAANNNNTTC	1 cut(s)	939
MseI	TTAA	3 cut(s)	213, 696, 959
MspA1I	CMGCKG	1 cut(s)	637
MspI	CCGG	1 cut(s)	1009
MspR9I	CCNGG	1 cut(s)	486
Mva1269I	GAATGC	1 cut(s)	1051
MvaI	CCWGG	1 cut(s)	486
MvnI	CGCG	1 cut(s)	523
MwoI	GCNNNNNNNGC	1 cut(s)	208
NcoI	CCATGG	4 cut(s)	141, 606, 686, 769
NdeII	GATC	4 cut(s)	238, 488, 743, 781
NlaIII	CATG	7 cut(s)	145, 592, 610, 671, 690, 773, 889
NlaIV	GGNNCC	2 cut(s)	304, 545
NmeAIII	GCCGAG	1 cut(s)	1045
NmuCI	GTSAC	1 cut(s)	3
NspV	TTCGAA	1 cut(s)	943
PaeR7I	CTCGAG	1 cut(s)	169
PaqCI	CACCTGC	1 cut(s)	369
PcsI	WCGNNNNNNNCGW	1 cut(s)	167
PctI	GAATGC	1 cut(s)	1051
PdmI	GAANNNNTTC	1 cut(s)	939
PfeI	GAWTC	4 cut(s)	134, 566, 615, 652
PfoI	TCCNGGA	1 cut(s)	484
PkrI	GCNGC	3 cut(s)	433, 436, 595
PleI	GAGTC	1 cut(s)	721
PpsI	GAGTC	1 cut(s)	721
PpuMI	RGGWCCY	1 cut(s)	302
Psp124BI	GAGCTC	1 cut(s)	685
Psp5II	RGGWCCY	1 cut(s)	302
Psp6I	CCWGG	1 cut(s)	484
PspFI	CCCAGC	2 cut(s)	476, 633
PspGI	CCWGG	1 cut(s)	484
PspN4I	GGNNCC	2 cut(s)	304, 545
PspPI	GGNCC	3 cut(s)	302, 543, 690
PspPPI	RGGWCCY	1 cut(s)	302
PstI	CTGCAG	1 cut(s)	598
PsuI	RGATCY	2 cut(s)	488, 781
PvuII	CAGCTG	1 cut(s)	637
RsaI	GTAC	1 cut(s)	1001
RsaNI	GTAC	1 cut(s)	1000
SacI	GAGCTC	1 cut(s)	685
SaqAI	TTAA	3 cut(s)	213, 696, 959
SatI	GCNGC	3 cut(s)	432, 435, 594
Sau3AI	GATC	4 cut(s)	238, 488, 743, 781
Sau96I	GGNCC	3 cut(s)	302, 543, 690
SchI	GAGTC	1 cut(s)	721
ScrFI	CCNGG	1 cut(s)	486
SduI	GDGCHC	2 cut(s)	503, 685
SfaNI	GCATC	3 cut(s)	391, 518, 631
SfcI	CTRYAG	2 cut(s)	426, 594
Sfr274I	CTCGAG	1 cut(s)	169
SfuI	TTCGAA	1 cut(s)	943
SinI	GGWCC	2 cut(s)	302, 690
SlaI	CTCGAG	1 cut(s)	169
SmlI	CTYRAG	4 cut(s)	169, 570, 713, 722
SmoI	CTYRAG	4 cut(s)	169, 570, 713, 722
Sse9I	AATT	3 cut(s)	451, 841, 1059
SsiI	CCGC	1 cut(s)	991
SstI	GAGCTC	1 cut(s)	685
StyD4I	CCNGG	1 cut(s)	484
StyI	CCWWGG	5 cut(s)	141, 315, 606, 686, 769
TaaI	ACNGT	3 cut(s)	99, 364, 759
TaiI	ACGT	1 cut(s)	529
TaqI	TCGA	5 cut(s)	170, 372, 891, 943, 1071
TasI	AATT	3 cut(s)	451, 841, 1059
TatI	WGTACW	1 cut(s)	999
TfiI	GAWTC	4 cut(s)	134, 566, 615, 652
Tru1I	TTAA	3 cut(s)	213, 696, 959
Tru9I	TTAA	3 cut(s)	213, 696, 959
TscAI	CASTG	1 cut(s)	12
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	3 cut(s)	431, 434, 593
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	1 cut(s)	405
TspRI	CASTG	1 cut(s)	12
VpaK11BI	GGWCC	2 cut(s)	302, 690
XapI	RAATTY	1 cut(s)	451
XhoI	CTCGAG	1 cut(s)	169
XmnI	GAANNNNTTC	1 cut(s)	939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.