pycom05g19180

uridine kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
22072058 .. 22075641
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19180.7

Sequence Viewer

Length: 1116 bp
ATGGGTAACACAGTAATTAAGTCTTTTAAAAAGGGGCGGTATCACGTGGATACTCGTGGCACTCGCAAGTGTAACTCAAACATCCGAATTCCATCCGGAAAACAAGACAGGTTTCTCCGACCCGACCTCCTCAACTCCGTATTCTCAAACTCTCTCTCTTTGTCTTTCTGTCGTTCTTCGGCCATGGAGTTCTCTCTGTCTTCCGCAACCTCGAGAGCTCACACGTATAATTCCTCACCAGAGCTGTTACAGTTTGAAAAAGCAAAATTTCGGACATGGGATTGTTATTTTCCCTCTCCTTCGCGAGCTAGGAGAATAGCGAAGCCTTTATTTGCTCAACCTGGAGCCCTCTCTGCCAAGCATAACCCTGTCAAGGTTGTATGTTGTCTAAAGAGAGAAGCTACTGAGGGAAGGTCTATGCATGAAGTATATGATGCTTTGGCCGCACGTCTTGTTCCTACAACTGCAGCAATAGGGAATCCAAACTTGAAGTATATTGTGGGTTTGGCTGGTTCTCCCGGATCTGGGAAAAGCACTACTGCGTCTGAAGTTGTGCGGCGTGTAAACAAGTTATGGCCCCAGAAAGCTTCTGCATTGGATTCTCAAGTTACTCCTCCAGAAGTGGCTGCAGTTCTCCCCATGGATGGTTTCCATCTTTATCGTTCTCAGCTGGATGCAATGGAGAATCCTGAGGAAGCTCATGCAAGAAGGGGAGCTCCATGGACCTTTAACCCTGAGCAACTACTCGAGTCTCTCAAGACTCTGAGACGTGAGGGATCAGTTTATGCACCATCATTTGACCATGGTGTTGGAGATCCAGTAGAAGATGATATTTTTGTGACCCTTCAGCATAAAGTGGTCATAGTAGAAGGAAATTATTTATTGTTGGATGATGGGATTTGGAAAGAAGTATCATCTATGTTTGACGAGAAATGGTTTCTTGAAGTTGATATTGACAAAGCTATGGAACGAGTTCGAAACAGACATATCTTAACGGCAGGGAAGCCCCCAGATGTTGCCAAATGGCGGGTTGAGTACAATGACCGGCCTAATGCGGTGACAGTAAACAAATCAAGGAGGAATGCTGATTTGATAATCAAGTCAATCGACTACTGA

Protein Analysis

372

Amino Acids

41.62

Weight (kDa)

9.37

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013394)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03030 AT1G03030
fragaria_vesca FvH4_2g22511
malus_domestica MD05G1205700.v1.1
prunus_persica Prupe.8G232100_v2.0.a1
pyrus_communis pycom05g19180
rosa_chinensis RchiOBHm_Chr6g0289561
rosa_laevigata RLG00000009408 RLG00000012293
rosa_multiflora Rmu_sc0001527.1_g000059
rosa_roxburghii Rroxscaffold_7G00177860
rosa_rugosa Rorug06G0204400 Rorug06G0204500
rosa_samantha Rh6AG316100 Rh6CG329100 Rh6DG314800
rosa_wichuraiana Rw4G006720 Rw6G027260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 304
AccIII TCCGGA 1 cut(s) 95
AciI CCGC 6 cut(s) 37, 204, 444, 556, 1027, 1055
AclWI GGATC 3 cut(s) 529, 784, 809
AcoI YGGCCR 2 cut(s) 180, 441
AcsI RAATTY 2 cut(s) 87, 266
AcuI CTGAAG 2 cut(s) 567, 830
AcvI CACGTG 1 cut(s) 46
AfaI GTAC 1 cut(s) 1037
AfiI CCNNNNNNNGG 5 cut(s) 373, 524, 525, 644, 1026
AflIII ACRYGT 1 cut(s) 222
AgsI TTSAA 3 cut(s) 257, 490, 944
AjiI CACGTC 2 cut(s) 449, 770
AjnI CCWGG 1 cut(s) 340
AluBI AGCT 9 cut(s) 218, 244, 308, 401, 587, 670, 698, 716, 962
AluI AGCT 9 cut(s) 218, 244, 308, 401, 587, 670, 698, 716, 962
Alw21I GWGCWC 2 cut(s) 220, 718
Alw26I GTCTC 2 cut(s) 756, 760
AlwI GGATC 3 cut(s) 529, 784, 809
Ama87I CYCGRG 2 cut(s) 211, 746
Aor13HI TCCGGA 1 cut(s) 95
AoxI GGCC 4 cut(s) 180, 441, 575, 1046
ApeKI GCWGC 2 cut(s) 467, 626
ApoI RAATTY 2 cut(s) 87, 266
Asp700I GAANNNNTTC 1 cut(s) 972
AspS9I GGNCC 2 cut(s) 576, 723
AsuC2I CCSGG 1 cut(s) 519
AsuHPI GGTGA 2 cut(s) 228, 1069
AsuII TTCGAA 1 cut(s) 976
AvaI CYCGRG 2 cut(s) 211, 746
AvaII GGWCC 1 cut(s) 723
AxyI CCTNAGG 1 cut(s) 690
BanII GRGCYC 3 cut(s) 220, 349, 718
BauI CACGAG 1 cut(s) 54
BbrPI CACGTG 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 192
Bbv12I GWGCWC 2 cut(s) 220, 718
BbvI GCAGC 2 cut(s) 479, 613
BccI CCATC 5 cut(s) 100, 638, 660, 799, 887
BceAI ACGGC 1 cut(s) 1011
BciT130I CCWGG 1 cut(s) 342
BciVI GTATCC 1 cut(s) 43
BcnI CCSGG 1 cut(s) 519
BcoDI GTCTC 2 cut(s) 756, 760
BfaI CTAG 1 cut(s) 309
BfmI CTRYAG 2 cut(s) 465, 627
BfuI GTATCC 1 cut(s) 43
BisI GCNGC 4 cut(s) 444, 468, 557, 627
BlsI GCNGC 4 cut(s) 445, 469, 558, 628
Bme1390I CCNGG 2 cut(s) 342, 519
Bme18I GGWCC 1 cut(s) 723
BmeT110I CYCGRG 2 cut(s) 211, 746
BmgBI CACGTC 2 cut(s) 449, 770
BmgT120I GGNCC 2 cut(s) 576, 723
BmiI GGNNCC 2 cut(s) 346, 578
BmrFI CCNGG 2 cut(s) 342, 519
BmsI GCATC 2 cut(s) 424, 664
BpiI GAAGAC 1 cut(s) 192
BpmI CTGGAG 2 cut(s) 363, 600
Bpu10I CCTNAGC 1 cut(s) 735
Bpu14I TTCGAA 1 cut(s) 976
BpuEI CTTGAG 2 cut(s) 588, 740
BpuMI CCSGG 1 cut(s) 519
BsaAI YACGTR 2 cut(s) 46, 225
BsaJI CCNNGG 4 cut(s) 183, 639, 719, 802
BsaWI WCCGGW 1 cut(s) 95
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 804, 834
Bsc4I CCNNNNNNNGG 5 cut(s) 373, 524, 525, 644, 1026
Bse118I RCCGGY 1 cut(s) 1044
Bse1I ACTGG 1 cut(s) 818
Bse21I CCTNAGG 1 cut(s) 690
Bse3DI GCAATG 1 cut(s) 684
BseAI TCCGGA 1 cut(s) 95
BseBI CCWGG 1 cut(s) 342
BseDI CCNNGG 4 cut(s) 183, 639, 719, 802
BseGI GGATG 5 cut(s) 81, 92, 649, 679, 895
BseLI CCNNNNNNNGG 5 cut(s) 373, 524, 525, 644, 1026
BseMI GCAATG 1 cut(s) 684
BseMII CTCAG 5 cut(s) 396, 680, 681, 726, 755
BseNI ACTGG 1 cut(s) 818
BseRI GAGGAG 2 cut(s) 119, 603
BseXI GCAGC 2 cut(s) 479, 613
Bsh1236I CGCG 1 cut(s) 304
BshFI GGCC 4 cut(s) 182, 443, 577, 1048
BsiHKAI GWGCWC 2 cut(s) 220, 718
BsiHKCI CYCGRG 2 cut(s) 211, 746
BsiSI CCGG 3 cut(s) 96, 519, 1045
BslI CCNNNNNNNGG 5 cut(s) 373, 524, 525, 644, 1026
BsmAI GTCTC 2 cut(s) 756, 760
BsmBI CGTCTC 1 cut(s) 760
BsmI GAATGC 1 cut(s) 1087
BsnI GGCC 4 cut(s) 182, 443, 577, 1048
BsoBI CYCGRG 2 cut(s) 211, 746
Bsp119I TTCGAA 1 cut(s) 976
Bsp1286I GDGCHC 3 cut(s) 220, 349, 718
Bsp13I TCCGGA 1 cut(s) 95
Bsp143I GATC 3 cut(s) 521, 776, 814
Bsp19I CCATGG 4 cut(s) 183, 639, 719, 802
Bsp68I TCGCGA 1 cut(s) 304
BspACI CCGC 6 cut(s) 37, 204, 444, 556, 1027, 1055
BspANI GGCC 4 cut(s) 182, 443, 577, 1048
BspCNI CTCAG 5 cut(s) 397, 679, 682, 727, 756
BspEI TCCGGA 1 cut(s) 95
BspFNI CGCG 1 cut(s) 304
BspLI GGNNCC 2 cut(s) 346, 578
BspMAI CTGCAG 2 cut(s) 469, 631
BspPI GGATC 3 cut(s) 529, 784, 809
BspT104I TTCGAA 1 cut(s) 976
BsrDI GCAATG 1 cut(s) 684
BsrFI RCCGGY 1 cut(s) 1044
BsrI ACTGG 1 cut(s) 818
BssAI RCCGGY 1 cut(s) 1044
BssECI CCNNGG 4 cut(s) 183, 639, 719, 802
BssMI GATC 3 cut(s) 521, 776, 814
BssSI CACGAG 1 cut(s) 54
BssT1I CCWWGG 4 cut(s) 183, 639, 719, 802
Bst2BI CACGAG 1 cut(s) 54
Bst2UI CCWGG 1 cut(s) 342
Bst4CI ACNGT 3 cut(s) 13, 252, 1063
BstBAI YACGTR 2 cut(s) 46, 225
BstBI TTCGAA 1 cut(s) 976
BstC8I GCNNGC 1 cut(s) 306
BstDEI CTNAG 5 cut(s) 405, 666, 690, 735, 764
BstDSI CCRYGG 4 cut(s) 183, 639, 719, 802
BstF5I GGATG 5 cut(s) 81, 92, 649, 679, 895
BstFNI CGCG 1 cut(s) 304
BstKTI GATC 3 cut(s) 524, 779, 817
BstMAI GTCTC 2 cut(s) 756, 760
BstMBI GATC 3 cut(s) 521, 776, 814
BstMWI GCNNNNNNNGC 2 cut(s) 353, 443
BstNI CCWGG 1 cut(s) 342
BstSCI CCNGG 2 cut(s) 340, 517
BstSFI CTRYAG 2 cut(s) 465, 627
BstUI CGCG 1 cut(s) 304
BstV1I GCAGC 2 cut(s) 479, 613
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 2 cut(s) 521, 814
BstXI CCANNNNNNTGG 1 cut(s) 809
BstYI RGATCY 2 cut(s) 521, 814
Bsu36I CCTNAGG 1 cut(s) 690
BsuI GTATCC 1 cut(s) 43
BsuRI GGCC 4 cut(s) 182, 443, 577, 1048
BtgI CCRYGG 4 cut(s) 183, 639, 719, 802
BtrI CACGTC 2 cut(s) 449, 770
BtsCI GGATG 5 cut(s) 81, 92, 649, 679, 895
BtuMI TCGCGA 1 cut(s) 304
Cac8I GCNNGC 1 cut(s) 306
Cfr10I RCCGGY 1 cut(s) 1044
Cfr13I GGNCC 2 cut(s) 576, 723
CseI GACGC 1 cut(s) 531
Csp6I GTAC 1 cut(s) 1036
CviAII CATG 7 cut(s) 184, 276, 422, 640, 701, 720, 803
CviQI GTAC 1 cut(s) 1036
DdeI CTNAG 5 cut(s) 405, 666, 690, 735, 764
DpnI GATC 3 cut(s) 523, 778, 816
DpnII GATC 3 cut(s) 521, 776, 814
DraI TTTAAA 1 cut(s) 28
EaeI YGGCCR 2 cut(s) 180, 441
Ecl136II GAGCTC 2 cut(s) 218, 716
Eco130I CCWWGG 4 cut(s) 183, 639, 719, 802
Eco24I GRGCYC 3 cut(s) 220, 349, 718
Eco47I GGWCC 1 cut(s) 723
Eco53kI GAGCTC 2 cut(s) 218, 716
Eco57I CTGAAG 2 cut(s) 567, 830
Eco72I CACGTG 1 cut(s) 46
Eco81I CCTNAGG 1 cut(s) 690
Eco88I CYCGRG 2 cut(s) 211, 746
EcoICRI GAGCTC 2 cut(s) 218, 716
EcoRI GAATTC 1 cut(s) 87
EcoRII CCWGG 1 cut(s) 340
EcoT14I CCWWGG 4 cut(s) 183, 639, 719, 802
EcoT22I ATGCAT 1 cut(s) 423
EcoT38I GRGCYC 3 cut(s) 220, 349, 718
ErhI CCWWGG 4 cut(s) 183, 639, 719, 802
Esp3I CGTCTC 1 cut(s) 760
FaeI CATG 7 cut(s) 187, 279, 425, 643, 704, 723, 806
FatI CATG 7 cut(s) 183, 275, 421, 639, 700, 719, 802
FauI CCCGC 1 cut(s) 1020
Fnu4HI GCNGC 4 cut(s) 444, 468, 557, 627
FokI GGATG 5 cut(s) 68, 79, 656, 686, 902
FriOI GRGCYC 3 cut(s) 220, 349, 718
Fsp4HI GCNGC 4 cut(s) 444, 468, 557, 627
FspBI CTAG 1 cut(s) 309
GluI GCNGC 4 cut(s) 444, 468, 557, 627
GsuI CTGGAG 2 cut(s) 363, 600
HaeIII GGCC 4 cut(s) 182, 443, 577, 1048
HapII CCGG 3 cut(s) 96, 519, 1045
HgaI GACGC 1 cut(s) 531
Hin1II CATG 7 cut(s) 187, 279, 425, 643, 704, 723, 806
HindIII AAGCTT 1 cut(s) 585
HinfI GANTC 5 cut(s) 478, 599, 685, 749, 760
HpaII CCGG 3 cut(s) 96, 519, 1045
HphI GGTGA 2 cut(s) 228, 1069
Hpy166II GTNNAC 2 cut(s) 565, 1066
Hpy188I TCNGA 5 cut(s) 86, 119, 273, 547, 765
Hpy188III TCNNGA 7 cut(s) 96, 213, 303, 617, 689, 757, 941
Hpy8I GTNNAC 2 cut(s) 565, 1066
HpyAV CCTTC 5 cut(s) 309, 405, 702, 854, 863
HpyCH4III ACNGT 3 cut(s) 13, 252, 1063
HpyCH4IV ACGT 4 cut(s) 45, 224, 448, 769
HpyCH4V TGCA 7 cut(s) 421, 467, 593, 629, 677, 704, 788
HpyF10VI GCNNNNNNNGC 2 cut(s) 353, 443
HpyF3I CTNAG 5 cut(s) 405, 666, 690, 735, 764
HpySE526I ACGT 4 cut(s) 45, 224, 448, 769
Hsp92II CATG 7 cut(s) 187, 279, 425, 643, 704, 723, 806
Kpn2I TCCGGA 1 cut(s) 95
Kzo9I GATC 3 cut(s) 521, 776, 814
LmnI GCTCC 3 cut(s) 344, 713, 721
Lsp1109I GCAGC 2 cut(s) 479, 613
LweI GCATC 2 cut(s) 424, 664
MaeI CTAG 1 cut(s) 309
MaeII ACGT 4 cut(s) 45, 224, 448, 769
MaeIII GTNAC 6 cut(s) 5, 71, 246, 607, 838, 1057
MalI GATC 3 cut(s) 523, 778, 816
MboI GATC 3 cut(s) 521, 776, 814
MboII GAAGA 3 cut(s) 168, 192, 836
MflI RGATCY 2 cut(s) 521, 814
MhlI GDGCHC 3 cut(s) 220, 349, 718
MluCI AATT 5 cut(s) 15, 87, 229, 266, 874
MlyI GAGTC 2 cut(s) 754, 758
MmeI TCCRAC 3 cut(s) 142, 790, 867
Mph1103I ATGCAT 1 cut(s) 423
MroI TCCGGA 1 cut(s) 95
MroXI GAANNNNTTC 1 cut(s) 972
MseI TTAA 4 cut(s) 18, 27, 729, 992
MspA1I CMGCKG 1 cut(s) 670
MspI CCGG 3 cut(s) 96, 519, 1045
MspR9I CCNGG 2 cut(s) 342, 519
Mva1269I GAATGC 1 cut(s) 1087
MvaI CCWGG 1 cut(s) 342
MvnI CGCG 1 cut(s) 304
MwoI GCNNNNNNNGC 2 cut(s) 353, 443
NciI CCSGG 1 cut(s) 519
NcoI CCATGG 4 cut(s) 183, 639, 719, 802
NdeII GATC 3 cut(s) 521, 776, 814
NlaIII CATG 7 cut(s) 187, 279, 425, 643, 704, 723, 806
NlaIV GGNNCC 2 cut(s) 346, 578
NmuCI GTSAC 2 cut(s) 838, 1057
NruI TCGCGA 1 cut(s) 304
NsiI ATGCAT 1 cut(s) 423
NspV TTCGAA 1 cut(s) 976
PaeR7I CTCGAG 2 cut(s) 211, 746
PctI GAATGC 1 cut(s) 1087
PdmI GAANNNNTTC 1 cut(s) 972
PfeI GAWTC 3 cut(s) 478, 599, 685
PfoI TCCNGGA 1 cut(s) 517
PkrI GCNGC 4 cut(s) 445, 469, 558, 628
PleI GAGTC 2 cut(s) 754, 757
PmaCI CACGTG 1 cut(s) 46
PmlI CACGTG 1 cut(s) 46
PpsI GAGTC 2 cut(s) 754, 757
Ppu21I YACGTR 2 cut(s) 46, 225
Psp124BI GAGCTC 2 cut(s) 220, 718
Psp6I CCWGG 1 cut(s) 340
PspCI CACGTG 1 cut(s) 46
PspGI CCWGG 1 cut(s) 340
PspN4I GGNNCC 2 cut(s) 346, 578
PspPI GGNCC 2 cut(s) 576, 723
PspXI VCTCGAGB 1 cut(s) 746
PstI CTGCAG 2 cut(s) 469, 631
PsuI RGATCY 2 cut(s) 521, 814
PvuII CAGCTG 1 cut(s) 670
RruI TCGCGA 1 cut(s) 304
RsaI GTAC 1 cut(s) 1037
RsaNI GTAC 1 cut(s) 1036
SacI GAGCTC 2 cut(s) 220, 718
SaqAI TTAA 4 cut(s) 18, 27, 729, 992
SatI GCNGC 4 cut(s) 444, 468, 557, 627
Sau3AI GATC 3 cut(s) 521, 776, 814
Sau96I GGNCC 2 cut(s) 576, 723
SchI GAGTC 2 cut(s) 754, 758
ScrFI CCNGG 2 cut(s) 342, 519
SduI GDGCHC 3 cut(s) 220, 349, 718
SfaNI GCATC 2 cut(s) 424, 664
SfcI CTRYAG 2 cut(s) 465, 627
Sfr274I CTCGAG 2 cut(s) 211, 746
SfuI TTCGAA 1 cut(s) 976
SinI GGWCC 1 cut(s) 723
SlaI CTCGAG 2 cut(s) 211, 746
SmlI CTYRAG 4 cut(s) 211, 603, 746, 755
SmoI CTYRAG 4 cut(s) 211, 603, 746, 755
Sse9I AATT 5 cut(s) 15, 87, 229, 266, 874
SsiI CCGC 6 cut(s) 37, 204, 444, 556, 1027, 1055
SspMI CTAG 1 cut(s) 309
SstI GAGCTC 2 cut(s) 220, 718
StyD4I CCNGG 2 cut(s) 340, 517
StyI CCWWGG 4 cut(s) 183, 639, 719, 802
TaaI ACNGT 3 cut(s) 13, 252, 1063
TaiI ACGT 4 cut(s) 48, 227, 451, 772
TaqI TCGA 4 cut(s) 212, 747, 976, 1107
TasI AATT 5 cut(s) 15, 87, 229, 266, 874
TatI WGTACW 1 cut(s) 1035
TauI GCSGC 2 cut(s) 446, 559
TfiI GAWTC 3 cut(s) 478, 599, 685
Tru1I TTAA 4 cut(s) 18, 27, 729, 992
Tru9I TTAA 4 cut(s) 18, 27, 729, 992
TseFI GTSAC 2 cut(s) 838, 1057
TseI GCWGC 2 cut(s) 467, 626
Tsp45I GTSAC 2 cut(s) 838, 1057
TspDTI ATGAA 1 cut(s) 438
TspGWI ACGGA 1 cut(s) 127
VpaK11BI GGWCC 1 cut(s) 723
XapI RAATTY 2 cut(s) 87, 266
XhoI CTCGAG 2 cut(s) 211, 746
XmnI GAANNNNTTC 1 cut(s) 972
XspI CTAG 1 cut(s) 309
Zsp2I ATGCAT 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.