Prupe.8G240900_v2.0.a1

RAN GTPase-activating protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21114323 .. 21118055
3733 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G240900.1

Sequence Viewer

Length: 1629 bp
ATGGATTCTCAAGCACAAGCTTTCCACCAGCGCTCAGTGTCTATCAAACTATGGCCCCCAAGCCAGAGCACCAGGATACTGCTTGTAGAACGAATGACCAAGAATTTCATCACTCCATCCTTTTTGTCTAGAAAGTATGGTCTGCTCAGTAAAGAAGAGGCCGAGGAGGATGCCAAGCAAATAGAAAATATTGCTTTTGCAGCTGCTGACCAACATTTTGAGAAGGAACCATATGGTGATGGAAGTTCGGCAGTTCAAATTTATGCTAAAGAGTCCAGTAAGCTTATGCTGGAAGTTCTCAAAAGAGGGCCCAAAGTAAAGGAACATGGAGAGGTGATGCAATATGAGAACGATACTGCTACCCATGGAAGTGTCTTTGATATATCTGGGAGTCGCCGGTCCTTTATTGATTCTGAGGAGGCCGTGGAACTGTTAAAACCATTAAGGGATCATGAAAAATTGTATACCAAGATATGTTTTAGCAATAGAAGCTTTGGTCTGGATGCAGCCCATGTTGCTGAGCCAATCTTAACATCTATCAAAGATCAATTGAAAGAAGTAGACCTGTCAGATATTATTGCAGGAAGGTCAGAAACAGAAGCTCTTCAAGTCATGAATATATTTTCTTCAGCCCTGGAAGGATGTGTTTTGAGGTATCTCAATCTTTCAGACAATGCCATGGGTGAAAAGGGTGTCAATGCATTTGGGTCACTCCTGAGGTCACAAACTAATTTAGAGGAACTTTATTTGATGAATGATGGCATATCAGAAGAAGCTGCAAGAGCAGTTTCTAAGTTTATCCCATCCACTGAGAAGCTTAGGGTCCTTCACTTTCACAACAATATGACTGGAGATGAGGGGGCAATTGCCATCTCTGACATGGTGAAACGTTCACCTCTCTTGGAGGATTTTCGTTGTTCTTCCACAAGGGTGGGCTCCGAAGGGGGCATAGCTTTAGCTGAAGCACTTGGGACATGTTCCCATCTGAAGAAGCTTGATTTGCGTGACAACATGTTTGGAGTACAATCTGGGATTGCTCTGAGTAAATCTCTATCTGCTTTTGCAGATCTTACTGAAATTTACCTGAGTTACCTTAACTTAGAAGATAAAGGAACAGAAGCCCTTGCCAATTCCCTCAAAGAGTCTGCACCCTCACTTGAGGTTTTGGAAATGGCAGGAAATGACATTACAGCCAGATCGGCTGCTGCTTTAGCAACCTGTATAGCAGCGAAACAATTCATTACCAGGTTAAACTTGTCTGAGAATGAACTGAAGGATGAAGGTGCGATTTTGATCAGCAAAGCAGTTGCAGAGGGTCATGGTCAGTTAACTGAGGTTGACTTGAACACAAATTCCATTAGAAGGGCTGGAGCAAGGGCGTTGGCACAGGCTGTTGTGCACAAACCTGGGTTCAAGTTGCTGAACATAAATGCTAATTTCATATCGGATGAGGGTATTGATGAGGTAAAGGAGATTTTTAAGAATTCACTGAATGTGCTTGGGCCTTTGGATGAGAACGACCCTGAAGGAGAAGATCTTGATGAGGAGGTTGAAGAGGACGCTGATAATGAGGTTGATTTGGAATCAAAGCTTAAGGGCCTTGAAATTAAGCAGGAAGAGAATTACTGA

Protein Analysis

543

Amino Acids

59.59

Weight (kDa)

4.81

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 464, 561
AclI AACGTT 1 cut(s) 889
AclWI GGATC 1 cut(s) 456
AcsI RAATTY 5 cut(s) 103, 258, 1077, 1351, 1483
AcuI CTGAAG 5 cut(s) 612, 981, 1007, 1292, 1545
AfaI GTAC 1 cut(s) 1023
AfeI AGCGCT 1 cut(s) 32
AfiI CCNNNNNNNGG 1 cut(s) 1362
AflII CTTAAG 1 cut(s) 1592
AflIII ACRYGT 2 cut(s) 974, 1011
AgsI TTSAA 7 cut(s) 257, 553, 608, 1345, 1414, 1553, 1604
AjnI CCWGG 4 cut(s) 71, 633, 1244, 1405
AleI CACNNNNGTG 1 cut(s) 929
AloI GAACNNNNNNTCC 2 cut(s) 1337, 1369
Alw21I GWGCWC 2 cut(s) 71, 1401
Alw44I GTGCAC 1 cut(s) 1397
AlwI GGATC 1 cut(s) 456
AlwNI CAGNNNCTG 1 cut(s) 206
Aor51HI AGCGCT 1 cut(s) 32
AoxI GGCC 6 cut(s) 53, 159, 308, 420, 1502, 1597
ApaI GGGCCC 1 cut(s) 312
ApaLI GTGCAC 1 cut(s) 1397
ApeKI GCWGC 7 cut(s) 200, 203, 506, 776, 1202, 1205, 1226
ApoI RAATTY 5 cut(s) 103, 258, 1077, 1351, 1483
ArsI GACNNNNNNTTYG 4 cut(s) 200, 232, 998, 1030
Asp700I GAANNNNTTC 2 cut(s) 603, 1235
AspLEI GCGC 1 cut(s) 33
AspS9I GGNCC 7 cut(s) 54, 308, 309, 399, 823, 1502, 1597
AsuHPI GGTGA 5 cut(s) 248, 346, 695, 885, 895
AvaII GGWCC 2 cut(s) 399, 823
AxyI CCTNAGG 1 cut(s) 716
BaeGI GKGCMC 2 cut(s) 312, 1401
BanII GRGCYC 2 cut(s) 312, 938
Bbv12I GWGCWC 2 cut(s) 71, 1401
BbvI GCAGC 7 cut(s) 190, 212, 518, 763, 1189, 1192, 1238
BccI CCATC 6 cut(s) 124, 233, 752, 811, 878, 990
BceAI ACGGC 1 cut(s) 407
BcgI CGANNNNNNTGC 2 cut(s) 152, 186
BciT130I CCWGG 4 cut(s) 73, 635, 1246, 1407
BciVI GTATCC 1 cut(s) 69
BclI TGATCA 1 cut(s) 1293
BfaI CTAG 1 cut(s) 129
BfoI RGCGCY 1 cut(s) 34
BfrI CTTAAG 1 cut(s) 1592
BfuI GTATCC 1 cut(s) 69
BglI GCCNNNNNGGC 1 cut(s) 1199
BglII AGATCT 2 cut(s) 1066, 1534
BisI GCNGC 7 cut(s) 201, 204, 507, 777, 1203, 1206, 1227
BlpI GCTNAGC 1 cut(s) 519
BlsI GCNGC 7 cut(s) 202, 205, 508, 778, 1204, 1207, 1228
Bme1390I CCNGG 4 cut(s) 73, 635, 1246, 1407
Bme18I GGWCC 2 cut(s) 399, 823
BmgT120I GGNCC 7 cut(s) 54, 308, 309, 399, 823, 1502, 1597
BmiI GGNNCC 5 cut(s) 56, 228, 310, 824, 937
BmrFI CCNGG 4 cut(s) 73, 635, 1246, 1407
BmsI GCATC 3 cut(s) 160, 327, 493
BplI GAGNNNNNCTC 2 cut(s) 1033, 1065
BpmI CTGGAG 2 cut(s) 870, 1389
Bpu10I CCTNAGC 1 cut(s) 818
Bpu1102I GCTNAGC 1 cut(s) 519
BpuEI CTTGAG 1 cut(s) 1178
BsaBI GATNNNNATC 1 cut(s) 1292
BsaJI CCNNGG 6 cut(s) 162, 364, 423, 633, 678, 1406
Bsc4I CCNNNNNNNGG 1 cut(s) 1362
Bse118I RCCGGY 1 cut(s) 396
Bse1I ACTGG 2 cut(s) 276, 853
Bse21I CCTNAGG 1 cut(s) 716
Bse8I GATNNNNATC 1 cut(s) 1292
BseBI CCWGG 4 cut(s) 73, 635, 1246, 1407
BseDI CCNNGG 6 cut(s) 162, 364, 423, 633, 678, 1406
BseGI GGATG 8 cut(s) 116, 175, 508, 647, 803, 1282, 1453, 1516
BseJI GATNNNNATC 1 cut(s) 1292
BseLI CCNNNNNNNGG 1 cut(s) 1362
BseNI ACTGG 2 cut(s) 276, 853
BseRI GAGGAG 3 cut(s) 179, 431, 1559
BseSI GKGCMC 2 cut(s) 312, 1401
BseXI GCAGC 7 cut(s) 190, 212, 518, 763, 1189, 1192, 1238
BsgI GTGCAG 1 cut(s) 1131
BshFI GGCC 6 cut(s) 55, 161, 310, 422, 1504, 1599
BsiHKAI GWGCWC 2 cut(s) 71, 1401
BsiSI CCGG 1 cut(s) 397
BslFI GGGAC 1 cut(s) 985
BslI CCNNNNNNNGG 1 cut(s) 1362
BsmFI GGGAC 1 cut(s) 985
BsnI GGCC 6 cut(s) 55, 161, 310, 422, 1504, 1599
Bsp120I GGGCCC 1 cut(s) 308
Bsp1286I GDGCHC 4 cut(s) 71, 312, 938, 1401
Bsp143I GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
Bsp1720I GCTNAGC 1 cut(s) 519
Bsp19I CCATGG 2 cut(s) 364, 678
BspANI GGCC 6 cut(s) 55, 161, 310, 422, 1504, 1599
BspHI TCATGA 2 cut(s) 451, 612
BspLI GGNNCC 5 cut(s) 56, 228, 310, 824, 937
BspPI GGATC 1 cut(s) 456
BspQI GCTCTTC 1 cut(s) 609
BspTI CTTAAG 1 cut(s) 1592
BsrFI RCCGGY 1 cut(s) 396
BsrI ACTGG 2 cut(s) 276, 853
BssAI RCCGGY 1 cut(s) 396
BssECI CCNNGG 6 cut(s) 162, 364, 423, 633, 678, 1406
BssMI GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
BssNAI GTATAC 1 cut(s) 465
BssT1I CCWWGG 2 cut(s) 364, 678
Bst1107I GTATAC 1 cut(s) 465
Bst2UI CCWGG 4 cut(s) 73, 635, 1246, 1407
Bst4CI ACNGT 1 cut(s) 432
Bst6I CTCTTC 4 cut(s) 150, 609, 1548, 1611
BstAFI CTTAAG 1 cut(s) 1592
BstDSI CCRYGG 3 cut(s) 364, 423, 678
BstF5I GGATG 8 cut(s) 116, 175, 508, 647, 803, 1282, 1453, 1516
BstH2I RGCGCY 1 cut(s) 34
BstHHI GCGC 1 cut(s) 33
BstKTI GATC 6 cut(s) 451, 547, 1069, 1199, 1296, 1537
BstMBI GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
BstMWI GCNNNNNNNGC 7 cut(s) 200, 489, 515, 782, 1000, 1199, 1211
BstNI CCWGG 4 cut(s) 73, 635, 1246, 1407
BstNSI RCATGY 2 cut(s) 978, 1015
BstSCI CCNGG 4 cut(s) 71, 633, 1244, 1405
BstSLI GKGCMC 2 cut(s) 312, 1401
BstV1I GCAGC 7 cut(s) 190, 212, 518, 763, 1189, 1192, 1238
BstX2I RGATCY 2 cut(s) 1066, 1534
BstXI CCANNNNNNTGG 1 cut(s) 931
BstYI RGATCY 2 cut(s) 1066, 1534
BstZ17I GTATAC 1 cut(s) 465
Bsu36I CCTNAGG 1 cut(s) 716
BsuI GTATCC 1 cut(s) 69
BsuRI GGCC 6 cut(s) 55, 161, 310, 422, 1504, 1599
BtgI CCRYGG 3 cut(s) 364, 423, 678
BtsCI GGATG 8 cut(s) 116, 175, 508, 647, 803, 1282, 1453, 1516
BtsIMutI CAGTG 3 cut(s) 42, 807, 1487
CaiI CAGNNNCTG 1 cut(s) 206
CciI TCATGA 2 cut(s) 451, 612
CfoI GCGC 1 cut(s) 33
Cfr10I RCCGGY 1 cut(s) 396
Cfr13I GGNCC 7 cut(s) 54, 308, 309, 399, 823, 1502, 1597
CseI GACGC 1 cut(s) 1568
CsiI ACCWGGT 1 cut(s) 1244
Csp6I GTAC 1 cut(s) 1022
CviQI GTAC 1 cut(s) 1022
DpnI GATC 6 cut(s) 450, 546, 1068, 1198, 1295, 1536
DpnII GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
Eam1104I CTCTTC 4 cut(s) 150, 609, 1548, 1611
EarI CTCTTC 4 cut(s) 150, 609, 1548, 1611
Eco130I CCWWGG 2 cut(s) 364, 678
Eco24I GRGCYC 2 cut(s) 312, 938
Eco47I GGWCC 2 cut(s) 399, 823
Eco47III AGCGCT 1 cut(s) 32
Eco57I CTGAAG 5 cut(s) 612, 981, 1007, 1292, 1545
Eco81I CCTNAGG 1 cut(s) 716
EcoO109I RGGNCCY 3 cut(s) 308, 823, 1597
EcoRI GAATTC 1 cut(s) 1483
EcoRII CCWGG 4 cut(s) 71, 633, 1244, 1405
EcoT14I CCWWGG 2 cut(s) 364, 678
EcoT22I ATGCAT 1 cut(s) 703
EcoT38I GRGCYC 2 cut(s) 312, 938
ErhI CCWWGG 2 cut(s) 364, 678
FaqI GGGAC 1 cut(s) 985
FauNDI CATATG 1 cut(s) 232
FbaI TGATCA 1 cut(s) 1293
FblI GTMKAC 2 cut(s) 464, 561
Fnu4HI GCNGC 7 cut(s) 201, 204, 507, 777, 1203, 1206, 1227
FokI GGATG 8 cut(s) 103, 182, 515, 654, 790, 1289, 1460, 1523
FriOI GRGCYC 2 cut(s) 312, 938
Fsp4HI GCNGC 7 cut(s) 201, 204, 507, 777, 1203, 1206, 1227
FspBI CTAG 1 cut(s) 129
GlaI GCGC 1 cut(s) 32
GluI GCNGC 7 cut(s) 201, 204, 507, 777, 1203, 1206, 1227
GsuI CTGGAG 2 cut(s) 870, 1389
HaeII RGCGCY 1 cut(s) 34
HaeIII GGCC 6 cut(s) 55, 161, 310, 422, 1504, 1599
HapII CCGG 1 cut(s) 397
HgaI GACGC 1 cut(s) 1568
HhaI GCGC 1 cut(s) 33
Hin6I GCGC 1 cut(s) 31
HinP1I GCGC 1 cut(s) 31
HincII GTYRAC 2 cut(s) 1329, 1339
HindII GTYRAC 2 cut(s) 1329, 1339
HindIII AAGCTT 6 cut(s) 18, 281, 490, 815, 992, 1589
HinfI GANTC 6 cut(s) 5, 272, 391, 410, 1142, 1583
HpaI GTTAAC 1 cut(s) 1329
HpaII CCGG 1 cut(s) 397
HphI GGTGA 5 cut(s) 248, 346, 695, 885, 895
Hpy166II GTNNAC 6 cut(s) 465, 562, 893, 1329, 1339, 1399
Hpy188III TCNNGA 6 cut(s) 129, 452, 500, 613, 715, 1538
Hpy8I GTNNAC 6 cut(s) 465, 562, 893, 1329, 1339, 1399
HpyAV CCTTC 9 cut(s) 217, 579, 632, 836, 935, 1267, 1274, 1356, 1520
HpyCH4III ACNGT 1 cut(s) 432
HpyCH4IV ACGT 1 cut(s) 889
HpyF10VI GCNNNNNNNGC 7 cut(s) 200, 489, 515, 782, 1000, 1199, 1211
HpySE526I ACGT 1 cut(s) 889
HspAI GCGC 1 cut(s) 31
Ksp22I TGATCA 1 cut(s) 1293
KspAI GTTAAC 1 cut(s) 1329
Kzo9I GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
LguI GCTCTTC 1 cut(s) 609
LmnI GCTCC 2 cut(s) 941, 1370
Lsp1109I GCAGC 7 cut(s) 190, 212, 518, 763, 1189, 1192, 1238
LweI GCATC 3 cut(s) 160, 327, 493
MabI ACCWGGT 1 cut(s) 1244
MaeI CTAG 1 cut(s) 129
MaeII ACGT 1 cut(s) 889
MaeIII GTNAC 4 cut(s) 708, 720, 1004, 1088
MalI GATC 6 cut(s) 450, 546, 1068, 1198, 1295, 1536
MboI GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
MfeI CAATTG 2 cut(s) 548, 864
MflI RGATCY 2 cut(s) 1066, 1534
MhlI GDGCHC 4 cut(s) 71, 312, 938, 1401
MlyI GAGTC 3 cut(s) 281, 400, 1151
Mph1103I ATGCAT 1 cut(s) 703
MroXI GAANNNNTTC 2 cut(s) 603, 1235
MseI TTAA 9 cut(s) 434, 443, 530, 1095, 1250, 1328, 1479, 1593, 1608
MslI CAYNNNNRTG 2 cut(s) 369, 929
MspA1I CMGCKG 1 cut(s) 203
MspCI CTTAAG 1 cut(s) 1592
MspI CCGG 1 cut(s) 397
MspR9I CCNGG 4 cut(s) 73, 635, 1246, 1407
MunI CAATTG 2 cut(s) 548, 864
MvaI CCWGG 4 cut(s) 73, 635, 1246, 1407
MwoI GCNNNNNNNGC 7 cut(s) 200, 489, 515, 782, 1000, 1199, 1211
NcoI CCATGG 2 cut(s) 364, 678
NdeI CATATG 1 cut(s) 232
NdeII GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
NlaIV GGNNCC 5 cut(s) 56, 228, 310, 824, 937
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 3 cut(s) 708, 720, 1004
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 2 cut(s) 978, 1015
OliI CACNNNNGTG 1 cut(s) 929
PagI TCATGA 2 cut(s) 451, 612
PciI ACATGT 2 cut(s) 974, 1011
PciSI GCTCTTC 1 cut(s) 609
PdmI GAANNNNTTC 2 cut(s) 603, 1235
PfeI GAWTC 3 cut(s) 5, 410, 1583
PkrI GCNGC 7 cut(s) 202, 205, 508, 778, 1204, 1207, 1228
PleI GAGTC 3 cut(s) 280, 399, 1150
PpsI GAGTC 3 cut(s) 280, 399, 1150
PpuMI RGGWCCY 1 cut(s) 823
PscI ACATGT 2 cut(s) 974, 1011
Psp1406I AACGTT 1 cut(s) 889
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 4 cut(s) 71, 633, 1244, 1405
PspGI CCWGG 4 cut(s) 71, 633, 1244, 1405
PspN4I GGNNCC 5 cut(s) 56, 228, 310, 824, 937
PspOMI GGGCCC 1 cut(s) 308
PspPI GGNCC 7 cut(s) 54, 308, 309, 399, 823, 1502, 1597
PspPPI RGGWCCY 1 cut(s) 823
PstNI CAGNNNCTG 1 cut(s) 206
PsuI RGATCY 2 cut(s) 1066, 1534
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 1 cut(s) 1023
RsaNI GTAC 1 cut(s) 1022
RseI CAYNNNNRTG 2 cut(s) 369, 929
SapI GCTCTTC 1 cut(s) 609
SaqAI TTAA 9 cut(s) 434, 443, 530, 1095, 1250, 1328, 1479, 1593, 1608
SatI GCNGC 7 cut(s) 201, 204, 507, 777, 1203, 1206, 1227
Sau3AI GATC 6 cut(s) 448, 544, 1066, 1196, 1293, 1534
Sau96I GGNCC 7 cut(s) 54, 308, 309, 399, 823, 1502, 1597
SchI GAGTC 3 cut(s) 281, 400, 1151
ScrFI CCNGG 4 cut(s) 73, 635, 1246, 1407
SduI GDGCHC 4 cut(s) 71, 312, 938, 1401
SexAI ACCWGGT 1 cut(s) 1244
SfaNI GCATC 3 cut(s) 160, 327, 493
SinI GGWCC 2 cut(s) 399, 823
SmiMI CAYNNNNRTG 2 cut(s) 369, 929
SmlI CTYRAG 3 cut(s) 9, 1157, 1592
SmoI CTYRAG 3 cut(s) 9, 1157, 1592
SspI AATATT 1 cut(s) 190
SspMI CTAG 1 cut(s) 129
StyD4I CCNGG 4 cut(s) 71, 633, 1244, 1405
StyI CCWWGG 2 cut(s) 364, 678
TaaI ACNGT 1 cut(s) 432
TaiI ACGT 1 cut(s) 892
TatI WGTACW 1 cut(s) 1021
TfiI GAWTC 3 cut(s) 5, 410, 1583
Tru1I TTAA 9 cut(s) 434, 443, 530, 1095, 1250, 1328, 1479, 1593, 1608
Tru9I TTAA 9 cut(s) 434, 443, 530, 1095, 1250, 1328, 1479, 1593, 1608
TscAI CASTG 3 cut(s) 42, 814, 1494
TseFI GTSAC 3 cut(s) 708, 720, 1004
TseI GCWGC 7 cut(s) 200, 203, 506, 776, 1202, 1205, 1226
Tsp45I GTSAC 3 cut(s) 708, 720, 1004
TspDTI ATGAA 8 cut(s) 97, 468, 629, 767, 1228, 1281, 1293, 1429
TspRI CASTG 3 cut(s) 42, 814, 1494
Vha464I CTTAAG 1 cut(s) 1592
VneI GTGCAC 1 cut(s) 1397
VpaK11BI GGWCC 2 cut(s) 399, 823
XapI RAATTY 5 cut(s) 103, 258, 1077, 1351, 1483
XbaI TCTAGA 1 cut(s) 128
XceI RCATGY 2 cut(s) 978, 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 877
XmiI GTMKAC 2 cut(s) 464, 561
XmnI GAANNNNTTC 2 cut(s) 603, 1235
XspI CTAG 1 cut(s) 129
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.