RLG00000001587

RAN GTPase-activating protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
17827225 .. 17827596
372 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001587

Sequence Viewer

Length: 372 bp
ATGGGATTGGCTGGAAATGATATTACAATTAAATCAACTGCTGCTATAGCTTCTTGTATAGCAAGAAAGCAACTCCTCACCAAGTTAATCTTGTCAGAGAATGAACTAAAGGATGAAGGTGCAATTCTGGTCAGCAAAGCATTAGCAAAGGGTCATGGTAAGTTAATTGAGGTTGATTTGAGCTCTAATTCAATTGGAAGGCCCAGTGCAAGACATTTAGCAGAGGTTGTTGTGAACAAACCTAGGTTCAAGTCGCTGAACATAAATGGTAACTTCATATCTGATAATGAAATTGATGTAGTGGATGTTCTTAAGATTTTCCCACATCTGCTTGGGCCTTTGGATGAGTATGACCCCAAAGCAATGTTCTAA

Protein Analysis

124

Amino Acids

13.31

Weight (kDa)

6.83

Isoelectric Point (pI)

23.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflII CTTAAG 1 cut(s) 311
AgsI TTSAA 2 cut(s) 192, 250
AjuI GAANNNNNNNTTGG 1 cut(s) 350
AluBI AGCT 2 cut(s) 50, 183
AluI AGCT 2 cut(s) 50, 183
Alw21I GWGCWC 1 cut(s) 185
AoxI GGCC 2 cut(s) 200, 335
ApeKI GCWGC 1 cut(s) 41
AspA2I CCTAGG 1 cut(s) 242
AspS9I GGNCC 2 cut(s) 201, 335
AsuHPI GGTGA 1 cut(s) 70
AvrII CCTAGG 1 cut(s) 242
BanII GRGCYC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 185
BbvI GCAGC 1 cut(s) 28
BfaI CTAG 1 cut(s) 243
BfmI CTRYAG 1 cut(s) 45
BfrI CTTAAG 1 cut(s) 311
BisI GCNGC 1 cut(s) 42
BlnI CCTAGG 1 cut(s) 242
BlsI GCNGC 1 cut(s) 43
BmgT120I GGNCC 2 cut(s) 201, 335
BmrI ACTGGG 1 cut(s) 198
BmuI ACTGGG 1 cut(s) 198
BsaJI CCNNGG 1 cut(s) 242
Bse1I ACTGG 1 cut(s) 204
Bse3DI GCAATG 1 cut(s) 369
BseDI CCNNGG 1 cut(s) 242
BseGI GGATG 3 cut(s) 118, 310, 349
BseMI GCAATG 1 cut(s) 369
BseNI ACTGG 1 cut(s) 204
BseRI GAGGAG 1 cut(s) 65
BseXI GCAGC 1 cut(s) 28
BshFI GGCC 2 cut(s) 202, 337
BsiHKAI GWGCWC 1 cut(s) 185
BsnI GGCC 2 cut(s) 202, 337
Bsp1286I GDGCHC 1 cut(s) 185
BspANI GGCC 2 cut(s) 202, 337
BspTI CTTAAG 1 cut(s) 311
BsrDI GCAATG 1 cut(s) 369
BsrI ACTGG 1 cut(s) 204
BssECI CCNNGG 1 cut(s) 242
BssT1I CCWWGG 1 cut(s) 242
BstAFI CTTAAG 1 cut(s) 311
BstF5I GGATG 3 cut(s) 118, 310, 349
BstMWI GCNNNNNNNGC 1 cut(s) 47
BstSFI CTRYAG 1 cut(s) 45
BstV1I GCAGC 1 cut(s) 28
BsuRI GGCC 2 cut(s) 202, 337
BtsCI GGATG 3 cut(s) 118, 310, 349
BtsIMutI CAGTG 1 cut(s) 211
Cfr13I GGNCC 2 cut(s) 201, 335
CviAII CATG 1 cut(s) 155
CviJI RGCY 5 cut(s) 11, 50, 183, 202, 337
CviKI_1 RGCY 5 cut(s) 11, 50, 183, 202, 337
Ecl136II GAGCTC 1 cut(s) 183
Eco130I CCWWGG 1 cut(s) 242
Eco24I GRGCYC 1 cut(s) 185
Eco53kI GAGCTC 1 cut(s) 183
EcoICRI GAGCTC 1 cut(s) 183
EcoT14I CCWWGG 1 cut(s) 242
EcoT38I GRGCYC 1 cut(s) 185
ErhI CCWWGG 1 cut(s) 242
FaeI CATG 1 cut(s) 158
FaiI YATR 6 cut(s) 47, 59, 156, 263, 278, 351
FalI AAGNNNNNCTT 2 cut(s) 74, 106
FatI CATG 1 cut(s) 154
Fnu4HI GCNGC 1 cut(s) 42
FokI GGATG 3 cut(s) 125, 317, 356
FriOI GRGCYC 1 cut(s) 185
Fsp4HI GCNGC 1 cut(s) 42
FspBI CTAG 1 cut(s) 243
GluI GCNGC 1 cut(s) 42
HaeIII GGCC 2 cut(s) 202, 337
Hin1II CATG 1 cut(s) 158
HphI GGTGA 1 cut(s) 70
Hpy166II GTNNAC 1 cut(s) 235
Hpy188I TCNGA 2 cut(s) 97, 283
Hpy8I GTNNAC 1 cut(s) 235
HpyAV CCTTC 2 cut(s) 110, 192
HpyCH4V TGCA 2 cut(s) 122, 209
HpyF10VI GCNNNNNNNGC 1 cut(s) 47
Hsp92II CATG 1 cut(s) 158
LpnPI CCDG 2 cut(s) 113, 217
Lsp1109I GCAGC 1 cut(s) 28
MaeI CTAG 1 cut(s) 243
MaeIII GTNAC 1 cut(s) 269
MfeI CAATTG 1 cut(s) 192
MhlI GDGCHC 1 cut(s) 185
MluCI AATT 6 cut(s) 27, 123, 165, 187, 192, 291
MnlI CCTC 3 cut(s) 86, 163, 217
MseI TTAA 4 cut(s) 30, 86, 164, 312
MspCI CTTAAG 1 cut(s) 311
MunI CAATTG 1 cut(s) 192
MwoI GCNNNNNNNGC 1 cut(s) 47
NlaIII CATG 1 cut(s) 158
PkrI GCNGC 1 cut(s) 43
Psp124BI GAGCTC 1 cut(s) 185
PspPI GGNCC 2 cut(s) 201, 335
PsrI GAACNNNNNNTAC 2 cut(s) 291, 323
SacI GAGCTC 1 cut(s) 185
SaqAI TTAA 4 cut(s) 30, 86, 164, 312
SatI GCNGC 1 cut(s) 42
Sau96I GGNCC 2 cut(s) 201, 335
SduI GDGCHC 1 cut(s) 185
SetI ASST 7 cut(s) 52, 121, 174, 185, 228, 244, 248
SfcI CTRYAG 1 cut(s) 45
SmlI CTYRAG 1 cut(s) 311
SmoI CTYRAG 1 cut(s) 311
Sse9I AATT 6 cut(s) 27, 123, 165, 187, 192, 291
SspMI CTAG 1 cut(s) 243
SstI GAGCTC 1 cut(s) 185
StyI CCWWGG 1 cut(s) 242
TasI AATT 6 cut(s) 27, 123, 165, 187, 192, 291
Tru1I TTAA 4 cut(s) 30, 86, 164, 312
Tru9I TTAA 4 cut(s) 30, 86, 164, 312
TscAI CASTG 1 cut(s) 211
TseI GCWGC 1 cut(s) 41
TspDTI ATGAA 4 cut(s) 117, 129, 265, 303
TspRI CASTG 1 cut(s) 211
Vha464I CTTAAG 1 cut(s) 311
XmaJI CCTAGG 1 cut(s) 242
XspI CTAG 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.