Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007706

Physical Location & Seq

Genomic Coordinates Reverse (-)

21305265 .. 21308067

Gene Structure 2803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G244900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGAAGCAAGGGTGTTCCCGCTAACGTGCACAGCGCTTCCACTCTCACCTGCGTCATCATCTTCATCTCATGGAAGGCTCTGGCCCTCTCCTTTCAAGCCCAAACATGCACCTAAAACAGTTTTGAGGAAGAGCAAGGAAGAGCCACTGTTAGAAGGTCTTCCCAAAGAGTATTACGACGATGAATGGCAAGCTCGGCAAAGGGAGAAAACAAAGGAGTTGCATCAAAGACGTCAAGAGGAAGATGAAGAGGAGGAAAGAAAGGTTGAAGAGTATCGCGAAATTGGCATGAGATTGAAGGGTTATCCGGAAGAAGATGTTCGGAAAGCTCGGAAATTGATTTCCAGCTTTATCAGAGCAGCCGAAGAAGTGGAAGAGAAAATTGAGGAAGCTGCTGAGAAAGGAGAATTGACTGAACTTGTTTTGATGGTCATATGGAATCGTCTTGACCTCGCTCGACGTGATGAAGAAAAGGATGTTATTAGAAGTCTTGATTTGTTATACAGAAGGGTTGAGGCTGAGATTTTGAAACGGGAGGCTACTCCTGCCATGAGACTGCTCAATGATCTTTTGAATATGCATGATGGGTATGATGGTGAAGGATGGCTGAAGGAATGCAAAAAGCGCATGGTTGATACTTTTCCACGAGAGGATCCATTTAGCATTCTCGTTCCAGAAGGATTTGATATTGATAAGCATCAGGGACCACTCCGGCTACCACTTGAAGCTGATGATGTTCTATTGAGGGTAGACTTTGTCAGAGAAGTTGATGCATTGCTACAAGAGGTTAAGGCCGAGCAAAATGAAGTACAAAATGCACAAGGGCTTGATGCTGAGTCCATTGCAAGTAGGTTGAAGCAGCAGGAGAAGCAGCGGGCAATACGCTTGGTAGAAGCTGTACTAGACCTGGCCATTAATTTGAAGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009295 GO:0009314 GO:0009416 GO:0009501 GO:0009507 GO:0009509 GO:0009513 GO:0009532 GO:0009536 GO:0009537 GO:0009570 GO:0009628 GO:0009653 GO:0009657 GO:0009658 GO:0009965 GO:0009987 GO:0010016 GO:0010239 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0019843 GO:0022613 GO:0031425 GO:0032501 GO:0032502 GO:0034641 GO:0042254 GO:0042644 GO:0042646 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043621 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051716 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0099402 GO:0104004 GO:1901360 GO:1901363 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

310

Amino Acids

36.09

Weight (kDa)

5.17

Isoelectric Point (pI)

61.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007706)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48120 AT2G48120
fragaria_vesca	FvH4_7g02610 FvH4_7g02610 FvH4_7g02610 FvH4_7g02610 FvH4_7g02610
malus_domestica	MD03G1268900.v1.1 MD11G1289700.v1.1
prunus_persica	Prupe.8G244900_v2.0.a1
pyrus_communis	pycom03g21470 pycom11g25710
rosa_chinensis	RchiOBHm_Chr1g0321311
rosa_laevigata	RLG00000030430
rosa_multiflora	Rmu_sc0000724.1_g000003 Rmu_sc0032428.1_g000001
rosa_roxburghii	Rroxscaffold_4G00327840
rosa_rugosa	Rorug01G0031900 Rorug01G0032000
rosa_samantha	Rh1AG044100 Rh1BG041800 Rh1CG046800 Rh1DG051300
rosa_wichuraiana	Rw1G003900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	58
AatII	GACGTC	1 cut(s)	235
Acc36I	ACCTGC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	750
AccII	CGCG	1 cut(s)	279
AccIII	TCCGGA	1 cut(s)	307
AciI	CCGC	2 cut(s)	20, 874
AclWI	GGATC	2 cut(s)	647, 660
AcoI	YGGCCR	1 cut(s)	909
AcuI	CTGAAG	1 cut(s)	629
AcyI	GRCGYC	1 cut(s)	232
AfaI	GTAC	2 cut(s)	810, 900
AfeI	AGCGCT	1 cut(s)	36
AgsI	TTSAA	8 cut(s)	97, 269, 298, 529, 574, 725, 856, 922
AjiI	CACGTC	1 cut(s)	461
AjnI	CCWGG	1 cut(s)	906
AluBI	AGCT	6 cut(s)	194, 329, 348, 392, 728, 896
AluI	AGCT	6 cut(s)	194, 329, 348, 392, 728, 896
Alw21I	GWGCWC	1 cut(s)	32
Alw26I	GTCTC	1 cut(s)	547
Alw44I	GTGCAC	1 cut(s)	28
AlwI	GGATC	2 cut(s)	647, 660
Aor13HI	TCCGGA	1 cut(s)	307
Aor51HI	AGCGCT	1 cut(s)	36
AoxI	GGCC	3 cut(s)	83, 792, 909
ApaLI	GTGCAC	1 cut(s)	28
ApeKI	GCWGC	4 cut(s)	359, 392, 859, 871
AseI	ATTAAT	1 cut(s)	915
Asp700I	GAANNNNTTC	2 cut(s)	159, 318
AspLEI	GCGC	2 cut(s)	37, 627
AspS9I	GGNCC	2 cut(s)	84, 704
AsuHPI	GGTGA	2 cut(s)	39, 608
AvaII	GGWCC	1 cut(s)	704
BaeGI	GKGCMC	1 cut(s)	32
BalI	TGGCCA	1 cut(s)	911
BamHI	GGATCC	1 cut(s)	652
BauI	CACGAG	1 cut(s)	645
BbsI	GAAGAC	1 cut(s)	152
Bbv12I	GWGCWC	1 cut(s)	32
BbvI	GCAGC	4 cut(s)	371, 379, 871, 883
BccI	CCATC	4 cut(s)	421, 578, 587, 597
BciT130I	CCWGG	1 cut(s)	908
BcoDI	GTCTC	1 cut(s)	547
BfaI	CTAG	1 cut(s)	902
BfoI	RGCGCY	1 cut(s)	38
BfuAI	ACCTGC	1 cut(s)	58
BisI	GCNGC	4 cut(s)	360, 393, 860, 872
BlsI	GCNGC	4 cut(s)	361, 394, 861, 873
Bme1390I	CCNGG	1 cut(s)	908
Bme18I	GGWCC	1 cut(s)	704
BmgBI	CACGTC	1 cut(s)	461
BmgT120I	GGNCC	2 cut(s)	84, 704
BmiI	GGNNCC	2 cut(s)	654, 705
BmrFI	CCNGG	1 cut(s)	908
BmsI	GCATC	4 cut(s)	232, 706, 760, 820
BpiI	GAAGAC	1 cut(s)	152
BsaBI	GATNNNNATC	1 cut(s)	696
BsaHI	GRCGYC	1 cut(s)	232
BsaWI	WCCGGW	1 cut(s)	307
Bse3DI	GCAATG	2 cut(s)	773, 840
Bse8I	GATNNNNATC	1 cut(s)	696
BseAI	TCCGGA	1 cut(s)	307
BseBI	CCWGG	1 cut(s)	908
BseGI	GGATG	2 cut(s)	481, 608
BseJI	GATNNNNATC	1 cut(s)	696
BseMI	GCAATG	2 cut(s)	773, 840
BseMII	CTCAG	3 cut(s)	387, 510, 825
BseRI	GAGGAG	1 cut(s)	266
BseSI	GKGCMC	1 cut(s)	32
BseXI	GCAGC	4 cut(s)	371, 379, 871, 883
Bsh1236I	CGCG	1 cut(s)	279
BshFI	GGCC	3 cut(s)	85, 794, 911
BsiHKAI	GWGCWC	1 cut(s)	32
BsiSI	CCGG	2 cut(s)	308, 712
BslFI	GGGAC	1 cut(s)	717
BsmAI	GTCTC	1 cut(s)	547
BsmFI	GGGAC	1 cut(s)	717
BsmI	GAATGC	2 cut(s)	620, 663
BsnI	GGCC	3 cut(s)	85, 794, 911
Bsp1286I	GDGCHC	1 cut(s)	32
Bsp13I	TCCGGA	1 cut(s)	307
Bsp143I	GATC	2 cut(s)	565, 652
Bsp68I	TCGCGA	1 cut(s)	279
BspACI	CCGC	2 cut(s)	20, 874
BspANI	GGCC	3 cut(s)	85, 794, 911
BspCNI	CTCAG	3 cut(s)	388, 511, 826
BspEI	TCCGGA	1 cut(s)	307
BspFNI	CGCG	1 cut(s)	279
BspLI	GGNNCC	2 cut(s)	654, 705
BspMI	ACCTGC	1 cut(s)	58
BspPI	GGATC	2 cut(s)	647, 660
BspQI	GCTCTTC	2 cut(s)	125, 135
BsrDI	GCAATG	2 cut(s)	773, 840
BssMI	GATC	2 cut(s)	565, 652
BssNI	GRCGYC	1 cut(s)	232
BssSI	CACGAG	1 cut(s)	645
Bst2BI	CACGAG	1 cut(s)	645
Bst2UI	CCWGG	1 cut(s)	908
Bst4CI	ACNGT	2 cut(s)	121, 150
Bst6I	CTCTTC	5 cut(s)	125, 135, 243, 264, 369
BstACI	GRCGYC	1 cut(s)	232
BstC8I	GCNNGC	2 cut(s)	192, 876
BstDEI	CTNAG	3 cut(s)	396, 519, 834
BstF5I	GGATG	2 cut(s)	481, 608
BstFNI	CGCG	1 cut(s)	279
BstH2I	RGCGCY	1 cut(s)	38
BstHHI	GCGC	2 cut(s)	37, 627
BstKTI	GATC	2 cut(s)	568, 655
BstMAI	GTCTC	1 cut(s)	547
BstMBI	GATC	2 cut(s)	565, 652
BstMWI	GCNNNNNNNGC	5 cut(s)	196, 285, 545, 624, 868
BstNI	CCWGG	1 cut(s)	908
BstNSI	RCATGY	1 cut(s)	110
BstSCI	CCNGG	1 cut(s)	906
BstSLI	GKGCMC	1 cut(s)	32
BstUI	CGCG	1 cut(s)	279
BstV1I	GCAGC	4 cut(s)	371, 379, 871, 883
BstV2I	GAAGAC	1 cut(s)	152
BstX2I	RGATCY	1 cut(s)	652
BstYI	RGATCY	1 cut(s)	652
BsuRI	GGCC	3 cut(s)	85, 794, 911
BtrI	CACGTC	1 cut(s)	461
BtsCI	GGATG	2 cut(s)	481, 608
BtsIMutI	CAGTG	1 cut(s)	146
BtuMI	TCGCGA	1 cut(s)	279
BveI	ACCTGC	1 cut(s)	58
Cac8I	GCNNGC	2 cut(s)	192, 876
CfoI	GCGC	2 cut(s)	37, 627
Cfr13I	GGNCC	2 cut(s)	84, 704
CseI	GACGC	1 cut(s)	42
Csp6I	GTAC	2 cut(s)	809, 899
CviAII	CATG	6 cut(s)	71, 107, 289, 550, 581, 628
CviQI	GTAC	2 cut(s)	809, 899
DdeI	CTNAG	3 cut(s)	396, 519, 834
DpnI	GATC	2 cut(s)	567, 654
DpnII	GATC	2 cut(s)	565, 652
EaeI	YGGCCR	1 cut(s)	909
Eam1104I	CTCTTC	5 cut(s)	125, 135, 243, 264, 369
EarI	CTCTTC	5 cut(s)	125, 135, 243, 264, 369
Eco47I	GGWCC	1 cut(s)	704
Eco47III	AGCGCT	1 cut(s)	36
Eco57I	CTGAAG	1 cut(s)	629
EcoRII	CCWGG	1 cut(s)	906
EcoT22I	ATGCAT	2 cut(s)	582, 775
FaeI	CATG	6 cut(s)	74, 110, 292, 553, 584, 631
FaqI	GGGAC	1 cut(s)	717
FatI	CATG	6 cut(s)	70, 106, 288, 549, 580, 627
FauI	CCCGC	2 cut(s)	27, 867
FauNDI	CATATG	1 cut(s)	434
FblI	GTMKAC	1 cut(s)	750
Fnu4HI	GCNGC	4 cut(s)	360, 393, 860, 872
FokI	GGATG	2 cut(s)	488, 615
Fsp4HI	GCNGC	4 cut(s)	360, 393, 860, 872
FspBI	CTAG	1 cut(s)	902
GlaI	GCGC	2 cut(s)	36, 626
GluI	GCNGC	4 cut(s)	360, 393, 860, 872
HaeII	RGCGCY	1 cut(s)	38
HaeIII	GGCC	3 cut(s)	85, 794, 911
HapII	CCGG	2 cut(s)	308, 712
HgaI	GACGC	1 cut(s)	42
HhaI	GCGC	2 cut(s)	37, 627
Hin1I	GRCGYC	1 cut(s)	232
Hin1II	CATG	6 cut(s)	74, 110, 292, 553, 584, 631
Hin6I	GCGC	2 cut(s)	35, 625
HinP1I	GCGC	2 cut(s)	35, 625
HinfI	GANTC	2 cut(s)	439, 836
HpaII	CCGG	2 cut(s)	308, 712
HphI	GGTGA	2 cut(s)	39, 608
Hpy166II	GTNNAC	2 cut(s)	30, 751
Hpy188I	TCNGA	4 cut(s)	324, 333, 356, 761
Hpy188III	TCNNGA	6 cut(s)	236, 278, 308, 446, 491, 674
Hpy8I	GTNNAC	2 cut(s)	30, 751
Hpy99I	CGWCG	2 cut(s)	182, 462
HpyAV	CCTTC	7 cut(s)	69, 149, 292, 501, 593, 604, 671
HpyCH4III	ACNGT	2 cut(s)	121, 150
HpyCH4IV	ACGT	3 cut(s)	26, 232, 460
HpyCH4V	TGCA	8 cut(s)	30, 110, 223, 580, 618, 773, 818, 845
HpyF10VI	GCNNNNNNNGC	5 cut(s)	196, 285, 545, 624, 868
HpyF3I	CTNAG	3 cut(s)	396, 519, 834
HpySE526I	ACGT	3 cut(s)	26, 232, 460
Hsp92I	GRCGYC	1 cut(s)	232
Hsp92II	CATG	6 cut(s)	74, 110, 292, 553, 584, 631
HspAI	GCGC	2 cut(s)	35, 625
Kpn2I	TCCGGA	1 cut(s)	307
Kzo9I	GATC	2 cut(s)	565, 652
LguI	GCTCTTC	2 cut(s)	125, 135
Lsp1109I	GCAGC	4 cut(s)	371, 379, 871, 883
LweI	GCATC	4 cut(s)	232, 706, 760, 820
MaeI	CTAG	1 cut(s)	902
MaeII	ACGT	3 cut(s)	26, 232, 460
MalI	GATC	2 cut(s)	567, 654
MboI	GATC	2 cut(s)	565, 652
MflI	RGATCY	1 cut(s)	652
MhlI	GDGCHC	1 cut(s)	32
MlsI	TGGCCA	1 cut(s)	911
MluCI	AATT	5 cut(s)	282, 335, 381, 407, 916
MluNI	TGGCCA	1 cut(s)	911
MlyI	GAGTC	1 cut(s)	845
Mox20I	TGGCCA	1 cut(s)	911
Mph1103I	ATGCAT	2 cut(s)	582, 775
MroI	TCCGGA	1 cut(s)	307
MroXI	GAANNNNTTC	2 cut(s)	159, 318
MscI	TGGCCA	1 cut(s)	911
MseI	TTAA	2 cut(s)	789, 915
Msp20I	TGGCCA	1 cut(s)	911
MspA1I	CMGCKG	1 cut(s)	874
MspI	CCGG	2 cut(s)	308, 712
MspR9I	CCNGG	1 cut(s)	908
Mva1269I	GAATGC	2 cut(s)	620, 663
MvaI	CCWGG	1 cut(s)	908
MvnI	CGCG	1 cut(s)	279
MwoI	GCNNNNNNNGC	5 cut(s)	196, 285, 545, 624, 868
NdeI	CATATG	1 cut(s)	434
NdeII	GATC	2 cut(s)	565, 652
NlaIII	CATG	6 cut(s)	74, 110, 292, 553, 584, 631
NlaIV	GGNNCC	2 cut(s)	654, 705
NmeAIII	GCCGAG	2 cut(s)	175, 820
NruI	TCGCGA	1 cut(s)	279
NsiI	ATGCAT	2 cut(s)	582, 775
NspI	RCATGY	1 cut(s)	110
PaqCI	CACCTGC	1 cut(s)	58
PciSI	GCTCTTC	2 cut(s)	125, 135
PctI	GAATGC	2 cut(s)	620, 663
PdmI	GAANNNNTTC	2 cut(s)	159, 318
PfeI	GAWTC	1 cut(s)	439
PflFI	GACNNNGTC	1 cut(s)	755
PkrI	GCNGC	4 cut(s)	361, 394, 861, 873
PleI	GAGTC	1 cut(s)	844
PpsI	GAGTC	1 cut(s)	844
PshBI	ATTAAT	1 cut(s)	915
Psp6I	CCWGG	1 cut(s)	906
PspGI	CCWGG	1 cut(s)	906
PspN4I	GGNNCC	2 cut(s)	654, 705
PspPI	GGNCC	2 cut(s)	84, 704
PsuI	RGATCY	1 cut(s)	652
PsyI	GACNNNGTC	1 cut(s)	755
RruI	TCGCGA	1 cut(s)	279
RsaI	GTAC	2 cut(s)	810, 900
RsaNI	GTAC	2 cut(s)	809, 899
SapI	GCTCTTC	2 cut(s)	125, 135
SaqAI	TTAA	2 cut(s)	789, 915
SatI	GCNGC	4 cut(s)	360, 393, 860, 872
Sau3AI	GATC	2 cut(s)	565, 652
Sau96I	GGNCC	2 cut(s)	84, 704
SchI	GAGTC	1 cut(s)	845
ScrFI	CCNGG	1 cut(s)	908
SduI	GDGCHC	1 cut(s)	32
SfaNI	GCATC	4 cut(s)	232, 706, 760, 820
SinI	GGWCC	1 cut(s)	704
Sse9I	AATT	5 cut(s)	282, 335, 381, 407, 916
SsiI	CCGC	2 cut(s)	20, 874
SspMI	CTAG	1 cut(s)	902
StyD4I	CCNGG	1 cut(s)	906
TaaI	ACNGT	2 cut(s)	121, 150
TaiI	ACGT	3 cut(s)	29, 235, 463
TaqI	TCGA	1 cut(s)	457
TasI	AATT	5 cut(s)	282, 335, 381, 407, 916
TatI	WGTACW	2 cut(s)	808, 898
TfiI	GAWTC	1 cut(s)	439
Tru1I	TTAA	2 cut(s)	789, 915
Tru9I	TTAA	2 cut(s)	789, 915
TscAI	CASTG	1 cut(s)	153
TseI	GCWGC	4 cut(s)	359, 392, 859, 871
TspDTI	ATGAA	5 cut(s)	54, 198, 261, 480, 819
TspRI	CASTG	1 cut(s)	153
Tth111I	GACNNNGTC	1 cut(s)	755
VneI	GTGCAC	1 cut(s)	28
VpaK11BI	GGWCC	1 cut(s)	704
VspI	ATTAAT	1 cut(s)	915
XceI	RCATGY	1 cut(s)	110
XmiI	GTMKAC	1 cut(s)	750
XmnI	GAANNNNTTC	2 cut(s)	159, 318
XspI	CTAG	1 cut(s)	902
ZraI	GACGTC	1 cut(s)	233
Zsp2I	ATGCAT	2 cut(s)	582, 775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.