Rorug01G0031900

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001169
Physical Location & Seq
Forward (+)
5399495 .. 5404237
4743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0031900.1

Sequence Viewer

Length: 2124 bp
ATGGATTCCTATGAAGCTACAAGGATTGTGTTCTCAAGGATCACGAACTTGGACCCAGAAAATGCTTCCAAAATCATGGGTCTTCTTCTAATTCAAGACCATGGAGAGAAGGAGATGATACGATTAGCTTTCGGCCCCGAGGCGTTTCTCCACTCTGTGATTCTCAAGGCTCGGAAGGACTTGGGACTAATGCCCATATCCAACTCTCCATCCACACCCACCACACCTTCCTCTCCTTCGCCTTTCCTCTCCACCAACCCAATCGCTATTTCGAGGCAAAACTCTGCTTCCTCAAGGCTGTCTCTCACTATACCAAACCCATCTTCTTCTGCTTCTACTTGGGCTGCTCTGTCTTCCGAGCTTCGAAACCAAGACGAGAGTATGATGATGAGTCCCAACAACATGGCTCCTAACGTGTCTTCTTCTTCTTCATCTTCCATGATGAATTCATCTCTACCCTTTTTCGGAAACGGTGGACCCGACCATGTGCTTGAGGAGTTTCAGCTTCAGGAGCAGCTCTCTTTTCTCAACGATGGAGCTCCCAAATCCCCTGATTTGTTTTACCCCCAGTCGGACTTGTCTTCCAGCCCAACTAATGGTTCTGATCAGACCCTTTTCTCCTCCTACGGTGGCTCCGGGAACTGGGGCGGTGGTGGGGCTCTTCACCGCCGGAGCTGCTCCGTCAGTGATGTGTGCTTGGAAGACCCGAATTCTGGGTTCGGGTGGAAGCCCTGTTTGTACTATGCTAGAGGGTACTGCAAGAATGGAACTAGCTGTAGATTCTTGCATGGTGGTGGAATAGGGGACTTGGGTTCAGATGGTGCTCCACTTGTTGGTTCACCAAGCAAGCTTGAGATGATGGACCAGTCGTGCCATGAAGCACTTCTCAGATCCAAGTCTGCTCAACAGCAAAGACTGGCTGCAGCTTCCCAGCTCATGGCCTCAGCCAACTCTTTCCCTTACTCCTCTACTAAGTGCATGAACTTCCTTATTCAGCAGCAACAAACTGATGCGCAGAGGGCCGCTGCAGCCTTGATGATGGGGGATGATATACACAAATTTAGTCGATCTCCTCGGATGGAAAGGAACGAGTTTCCAATGATGAACGGTGGGGCTGGGATGGTGAACCCAGCCTCAAGGCAGATATACTTGACTTTTCCAGCTGATAGCACTTTCAGAGAAGAAGACGTGTCAAATTACTTCAGCATTTATGGACCTGTTCAAGATGTGAGAATTCCATACCAGCAGAAGAGGATGTTTGGGTTTGTTACATTTGTGTACCCGGAGACTGTGAAGCTTATTTTGGCGAAAGGGAACCCTCATTTTGTTTGTGATGCTAGAGTGCTGGTCAAGCCTTACAAGGAGAAGGGCAAAGTTCAGGACAAGAAGCAACAAGTGGAAAGAGGAGATTTGTCACCCTGTGGTACACCTACTGGCCTTGATGGTAGAGACCCTTATGATCTCCAGCTAGGAGCTAGGATGTTTTACAACTCTCAAGACATGTTGTGGAGGAGGAAGCTGGAGGAGCAAGCTGAGCTTCAGCAAGCACTTGAACTTCAAAGCCGAAGGCTAATGGGTCTGCAGCTTCTTGATGTCAAGAAGCATCACCACCGAGCTCTTTCTGCCAGCAGTCCGATTAATTCTCCTACTCAGTCCCCCAAGAACTGCGCTAGTCCAGTGCCACCCATTTCTTCAGCTCTCTCAGCAGACCATCAGCCTCAGGTGGCAGCAACCGTTGCTATAGGTAAAGAATCAGGTGCCAACAGTGACGACAGTGGGAGTGGCAAGGAAAGCCCCCATGATGACGATGTCAGTGGTTTGCTAGGAAGCTTGGAGCACAACCTCCCCGACAGTCCTTTTGCTTCTCCAACAAAAGGAGCCCGGGATTACTTGTCTGCATTCCCGGTGGTCGCGGCCAGTGAGGCCAATGATTCATCTGATGCCTCAGCTGCAACAGCTAACATTAACTTGGCTACTTCCCTACTGCCAGCCACTTCCTCACTGGACATGGCATCTTTCAAGTCCTTTAACTGCCAAATTCCAAGGTTGTCTTCCGGCCATGGAGCCATAGGGATGTATGCCGCCGGCGCAGGGGGGCCGAAATGCCCGGTTGGAACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

707

Amino Acids

75.97

Weight (kDa)

6.13

Isoelectric Point (pI)

58.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 64 4.1e-33 AtC3H46 PABC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1014
AccB1I GGYRCC 1 cut(s) 1757
AccB7I CCANNNNNTGG 3 cut(s) 596, 833, 937
AccII CGCG 1 cut(s) 1913
AciI CCGC 5 cut(s) 648, 667, 1023, 1913, 2082
AclWI GGATC 2 cut(s) 47, 885
AcoI YGGCCR 2 cut(s) 1914, 2056
AcsI RAATTY 5 cut(s) 445, 709, 1058, 1233, 2037
AcuI CTGAAG 4 cut(s) 491, 1186, 1523, 1677
AdeI CACNNNGTG 2 cut(s) 157, 1421
AfaI GTAC 4 cut(s) 740, 755, 1280, 1426
AfiI CCNNNNNNNGG 9 cut(s) 464, 571, 596, 642, 713, 833, 937, 1874, 2091
AflIII ACRYGT 3 cut(s) 414, 1188, 1500
AgsI TTSAA 5 cut(s) 95, 1223, 1553, 1559, 2020
AjiI CACGTC 1 cut(s) 1189
Alw21I GWGCWC 4 cut(s) 541, 826, 1618, 1839
Alw26I GTCTC 3 cut(s) 306, 1280, 1443
AlwI GGATC 2 cut(s) 47, 885
Ama87I CYCGRG 2 cut(s) 137, 1881
AoxI GGCC 8 cut(s) 133, 939, 1020, 1435, 1914, 1923, 2056, 2096
ApoI RAATTY 5 cut(s) 445, 709, 1058, 1233, 2037
ArsI GACNNNNNNTTYG 2 cut(s) 1841, 1873
AseI ATTAAT 1 cut(s) 1638
Asp700I GAANNNNTTC 1 cut(s) 882
AspLEI GCGC 3 cut(s) 1015, 1670, 2090
AspS9I GGNCC 7 cut(s) 52, 134, 476, 862, 1020, 1214, 2096
AsuC2I CCSGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
AsuHPI GGTGA 5 cut(s) 656, 831, 1135, 1407, 1598
AsuII TTCGAA 1 cut(s) 364
AvaI CYCGRG 2 cut(s) 137, 1881
AvaII GGWCC 4 cut(s) 52, 476, 862, 1214
AxyI CCTNAGG 1 cut(s) 1719
BanI GGYRCC 1 cut(s) 1757
BanII GRGCYC 4 cut(s) 541, 661, 1618, 1882
BbsI GAAGAC 7 cut(s) 74, 345, 411, 573, 708, 1191, 2043
Bbv12I GWGCWC 4 cut(s) 541, 826, 1618, 1839
BbvCI CCTCAGC 2 cut(s) 943, 1945
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
BcoDI GTCTC 3 cut(s) 306, 1280, 1443
BfaI CTAG 7 cut(s) 747, 771, 1338, 1469, 1476, 1671, 1823
BfmI CTRYAG 5 cut(s) 775, 921, 1026, 1580, 1740
BglI GCCNNNNNGGC 1 cut(s) 1922
BlpI GCTNAGC 1 cut(s) 1533
Bme1390I CCNGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
Bme18I GGWCC 4 cut(s) 52, 476, 862, 1214
BmeT110I CYCGRG 2 cut(s) 137, 1881
BmgBI CACGTC 1 cut(s) 1189
BmgT120I GGNCC 7 cut(s) 52, 134, 476, 862, 1020, 1214, 2096
BmrFI CCNGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
BmrI ACTGGG 2 cut(s) 562, 652
BmsI GCATC 5 cut(s) 1000, 1324, 1612, 1930, 2021
BmuI ACTGGG 2 cut(s) 562, 652
BpiI GAAGAC 7 cut(s) 74, 345, 411, 573, 708, 1191, 2043
BplI GAGNNNNNCTC 2 cut(s) 503, 535
BpmI CTGGAG 2 cut(s) 1448, 1541
Bpu10I CCTNAGC 2 cut(s) 943, 1945
Bpu1102I GCTNAGC 1 cut(s) 1533
Bpu14I TTCGAA 1 cut(s) 364
BpuEI CTTGAG 7 cut(s) 19, 149, 277, 512, 872, 1120, 1479
BpuMI CCSGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
BsaI GGTCTC 1 cut(s) 1443
BsaJI CCNNGG 6 cut(s) 100, 138, 1073, 1881, 2042, 2059
BsaXI ACNNNNNCTCC 2 cut(s) 617, 647
Bsc4I CCNNNNNNNGG 9 cut(s) 464, 571, 596, 642, 713, 833, 937, 1874, 2091
Bse118I RCCGGY 1 cut(s) 2084
Bse1I ACTGG 8 cut(s) 568, 647, 865, 921, 1438, 1676, 1917, 2007
Bse21I CCTNAGG 1 cut(s) 1719
BseDI CCNNGG 6 cut(s) 100, 138, 1073, 1881, 2042, 2059
BseGI GGATG 7 cut(s) 209, 1051, 1083, 1125, 1260, 1485, 2079
BseLI CCNNNNNNNGG 9 cut(s) 464, 571, 596, 642, 713, 833, 937, 1874, 2091
BseMII CTCAG 7 cut(s) 901, 957, 1524, 1664, 1716, 1733, 1959
BseNI ACTGG 8 cut(s) 568, 647, 865, 921, 1438, 1676, 1917, 2007
BseRI GAGGAG 7 cut(s) 509, 610, 955, 1062, 1419, 1525, 1538
BseYI CCCAGC 3 cut(s) 930, 1115, 1129
Bsh1236I CGCG 1 cut(s) 1913
BshFI GGCC 8 cut(s) 135, 941, 1022, 1437, 1916, 1925, 2058, 2098
BshNI GGYRCC 1 cut(s) 1757
BsiHKAI GWGCWC 4 cut(s) 541, 826, 1618, 1839
BsiHKCI CYCGRG 2 cut(s) 137, 1881
BsiSI CCGG 8 cut(s) 636, 670, 1283, 1882, 1904, 2055, 2085, 2108
BslFI GGGAC 4 cut(s) 198, 378, 818, 1639
BslI CCNNNNNNNGG 9 cut(s) 464, 571, 596, 642, 713, 833, 937, 1874, 2091
BsmAI GTCTC 3 cut(s) 306, 1280, 1443
BsmFI GGGAC 4 cut(s) 198, 378, 818, 1639
BsmI GAATGC 1 cut(s) 1898
BsnI GGCC 8 cut(s) 135, 941, 1022, 1437, 1916, 1925, 2058, 2098
Bso31I GGTCTC 1 cut(s) 1443
BsoBI CYCGRG 2 cut(s) 137, 1881
Bsp119I TTCGAA 1 cut(s) 364
Bsp1286I GDGCHC 6 cut(s) 541, 661, 826, 1618, 1839, 1882
Bsp143I GATC 5 cut(s) 39, 604, 890, 1067, 1459
Bsp1720I GCTNAGC 1 cut(s) 1533
Bsp19I CCATGG 2 cut(s) 100, 2059
BspACI CCGC 5 cut(s) 648, 667, 1023, 1913, 2082
BspANI GGCC 8 cut(s) 135, 941, 1022, 1437, 1916, 1925, 2058, 2098
BspCNI CTCAG 7 cut(s) 900, 956, 1525, 1663, 1715, 1732, 1958
BspFNI CGCG 1 cut(s) 1913
BspMAI CTGCAG 3 cut(s) 925, 1030, 1584
BspPI GGATC 2 cut(s) 47, 885
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 1 cut(s) 364
BspT107I GGYRCC 1 cut(s) 1757
BspTNI GGTCTC 1 cut(s) 1443
BsrFI RCCGGY 1 cut(s) 2084
BsrI ACTGG 8 cut(s) 568, 647, 865, 921, 1438, 1676, 1917, 2007
BssAI RCCGGY 1 cut(s) 2084
BssECI CCNNGG 6 cut(s) 100, 138, 1073, 1881, 2042, 2059
BssMI GATC 5 cut(s) 39, 604, 890, 1067, 1459
BssT1I CCWWGG 3 cut(s) 100, 2042, 2059
Bst4CI ACNGT 8 cut(s) 473, 629, 1109, 1291, 1735, 1766, 1775, 1853
Bst6I CTCTTC 2 cut(s) 666, 1244
BstAPI GCANNNNNTGC 1 cut(s) 1736
BstBI TTCGAA 1 cut(s) 364
BstC8I GCNNGC 6 cut(s) 848, 1530, 1545, 1627, 1989, 2086
BstDEI CTNAG 8 cut(s) 887, 943, 972, 1533, 1650, 1702, 1719, 1945
BstDSI CCRYGG 2 cut(s) 100, 2059
BstF5I GGATG 7 cut(s) 209, 1051, 1083, 1125, 1260, 1485, 2079
BstFNI CGCG 1 cut(s) 1913
BstHHI GCGC 3 cut(s) 1015, 1670, 2090
BstKTI GATC 5 cut(s) 42, 607, 893, 1070, 1462
BstMAI GTCTC 3 cut(s) 306, 1280, 1443
BstMBI GATC 5 cut(s) 39, 604, 890, 1067, 1459
BstNSI RCATGY 1 cut(s) 1504
BstSCI CCNGG 6 cut(s) 635, 1281, 1880, 1881, 1902, 2106
BstSFI CTRYAG 5 cut(s) 775, 921, 1026, 1580, 1740
BstUI CGCG 1 cut(s) 1913
BstV2I GAAGAC 7 cut(s) 74, 345, 411, 573, 708, 1191, 2043
BstX2I RGATCY 1 cut(s) 890
BstXI CCANNNNNNTGG 2 cut(s) 76, 403
BstYI RGATCY 1 cut(s) 890
Bsu36I CCTNAGG 1 cut(s) 1719
BsuRI GGCC 8 cut(s) 135, 941, 1022, 1437, 1916, 1925, 2058, 2098
BtgI CCRYGG 2 cut(s) 100, 2059
BtrI CACGTC 1 cut(s) 1189
BtsCI GGATG 7 cut(s) 209, 1051, 1083, 1125, 1260, 1485, 2079
BtsIMutI CAGTG 7 cut(s) 691, 1683, 1771, 1780, 1819, 1924, 2000
Cac8I GCNNGC 6 cut(s) 848, 1530, 1545, 1627, 1989, 2086
CfoI GCGC 3 cut(s) 1015, 1670, 2090
Cfr10I RCCGGY 1 cut(s) 2084
Cfr13I GGNCC 7 cut(s) 52, 134, 476, 862, 1020, 1214, 2096
Cfr9I CCCGGG 1 cut(s) 1881
Csp6I GTAC 4 cut(s) 739, 754, 1279, 1425
CviQI GTAC 4 cut(s) 739, 754, 1279, 1425
DdeI CTNAG 8 cut(s) 887, 943, 972, 1533, 1650, 1702, 1719, 1945
DpnI GATC 5 cut(s) 41, 606, 892, 1069, 1461
DpnII GATC 5 cut(s) 39, 604, 890, 1067, 1459
DraIII CACNNNGTG 2 cut(s) 157, 1421
EaeI YGGCCR 2 cut(s) 1914, 2056
Eam1104I CTCTTC 2 cut(s) 666, 1244
EarI CTCTTC 2 cut(s) 666, 1244
Ecl136II GAGCTC 2 cut(s) 539, 1616
Eco130I CCWWGG 3 cut(s) 100, 2042, 2059
Eco24I GRGCYC 4 cut(s) 541, 661, 1618, 1882
Eco31I GGTCTC 1 cut(s) 1443
Eco47I GGWCC 4 cut(s) 52, 476, 862, 1214
Eco53kI GAGCTC 2 cut(s) 539, 1616
Eco57I CTGAAG 4 cut(s) 491, 1186, 1523, 1677
Eco81I CCTNAGG 1 cut(s) 1719
Eco88I CYCGRG 2 cut(s) 137, 1881
EcoICRI GAGCTC 2 cut(s) 539, 1616
EcoRI GAATTC 3 cut(s) 445, 709, 1233
EcoT14I CCWWGG 3 cut(s) 100, 2042, 2059
EcoT38I GRGCYC 4 cut(s) 541, 661, 1618, 1882
ErhI CCWWGG 3 cut(s) 100, 2042, 2059
FalI AAGNNNNNCTT 4 cut(s) 1521, 1553, 2035, 2067
FaqI GGGAC 4 cut(s) 198, 378, 818, 1639
FbaI TGATCA 1 cut(s) 604
FokI GGATG 7 cut(s) 196, 1058, 1090, 1132, 1267, 1492, 2086
FriOI GRGCYC 4 cut(s) 541, 661, 1618, 1882
FspBI CTAG 7 cut(s) 747, 771, 1338, 1469, 1476, 1671, 1823
FspI TGCGCA 1 cut(s) 1014
GlaI GCGC 3 cut(s) 1014, 1669, 2089
GsaI CCCAGC 3 cut(s) 934, 1119, 1133
GsuI CTGGAG 2 cut(s) 1448, 1541
HaeIII GGCC 8 cut(s) 135, 941, 1022, 1437, 1916, 1925, 2058, 2098
HapII CCGG 8 cut(s) 636, 670, 1283, 1882, 1904, 2055, 2085, 2108
HhaI GCGC 3 cut(s) 1015, 1670, 2090
Hin6I GCGC 3 cut(s) 1013, 1668, 2088
HinP1I GCGC 3 cut(s) 1013, 1668, 2088
HindIII AAGCTT 3 cut(s) 848, 1295, 1828
HinfI GANTC 6 cut(s) 5, 160, 391, 780, 1751, 1931
HpaII CCGG 8 cut(s) 636, 670, 1283, 1882, 1904, 2055, 2085, 2108
HphI GGTGA 5 cut(s) 656, 831, 1135, 1407, 1598
Hpy166II GTNNAC 5 cut(s) 476, 839, 1126, 1279, 1427
Hpy188III TCNNGA 8 cut(s) 43, 95, 509, 1223, 1379, 1496, 1589, 1597
Hpy8I GTNNAC 5 cut(s) 476, 839, 1126, 1279, 1427
HpyAV CCTTC 6 cut(s) 103, 169, 237, 246, 1360, 1560
HpyCH4III ACNGT 8 cut(s) 473, 629, 1109, 1291, 1735, 1766, 1775, 1853
HpyCH4IV ACGT 2 cut(s) 414, 1188
HpyCH4V TGCA 8 cut(s) 759, 787, 923, 978, 1028, 1582, 1898, 1952
HpyF3I CTNAG 8 cut(s) 887, 943, 972, 1533, 1650, 1702, 1719, 1945
HpySE526I ACGT 2 cut(s) 414, 1188
HspAI GCGC 3 cut(s) 1013, 1668, 2088
KroI GCCGGC 1 cut(s) 2084
KroNI GCCGGC 1 cut(s) 2086
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 5 cut(s) 39, 604, 890, 1067, 1459
LguI GCTCTTC 1 cut(s) 666
LweI GCATC 5 cut(s) 1000, 1324, 1612, 1930, 2021
MaeI CTAG 7 cut(s) 747, 771, 1338, 1469, 1476, 1671, 1823
MaeII ACGT 2 cut(s) 414, 1188
MaeIII GTNAC 3 cut(s) 1267, 1413, 1766
MalI GATC 5 cut(s) 41, 606, 892, 1069, 1461
MboI GATC 5 cut(s) 39, 604, 890, 1067, 1459
MflI RGATCY 1 cut(s) 890
MhlI GDGCHC 6 cut(s) 541, 661, 826, 1618, 1839, 1882
MluCI AATT 8 cut(s) 90, 445, 709, 1058, 1195, 1233, 1639, 2037
MlyI GAGTC 1 cut(s) 400
MmeI TCCRAC 4 cut(s) 225, 552, 1892, 2092
MreI CGCCGGCG 1 cut(s) 2084
MroNI GCCGGC 1 cut(s) 2084
MroXI GAANNNNTTC 1 cut(s) 882
MseI TTAA 3 cut(s) 1638, 1965, 2028
MslI CAYNNNNRTG 2 cut(s) 792, 2072
MspA1I CMGCKG 3 cut(s) 1025, 1163, 1949
MspI CCGG 8 cut(s) 636, 670, 1283, 1882, 1904, 2055, 2085, 2108
MspR9I CCNGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
Mva1269I GAATGC 1 cut(s) 1898
MvnI CGCG 1 cut(s) 1913
NaeI GCCGGC 1 cut(s) 2086
NciI CCSGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
NcoI CCATGG 2 cut(s) 100, 2059
NdeII GATC 5 cut(s) 39, 604, 890, 1067, 1459
NgoMIV GCCGGC 1 cut(s) 2084
NmuCI GTSAC 2 cut(s) 1413, 1766
NsbI TGCGCA 1 cut(s) 1014
NspI RCATGY 1 cut(s) 1504
NspV TTCGAA 1 cut(s) 364
PciI ACATGT 1 cut(s) 1500
PciSI GCTCTTC 1 cut(s) 666
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PctI GAATGC 1 cut(s) 1898
PdiI GCCGGC 1 cut(s) 2086
PdmI GAANNNNTTC 1 cut(s) 882
PfeI GAWTC 5 cut(s) 5, 160, 780, 1751, 1931
PflFI GACNNNGTC 1 cut(s) 1808
PflMI CCANNNNNTGG 3 cut(s) 596, 833, 937
PfoI TCCNGGA 1 cut(s) 635
PleI GAGTC 1 cut(s) 399
PpsI GAGTC 1 cut(s) 399
PscI ACATGT 1 cut(s) 1500
PshBI ATTAAT 1 cut(s) 1638
Psp124BI GAGCTC 2 cut(s) 541, 1618
PspFI CCCAGC 3 cut(s) 930, 1115, 1129
PspPI GGNCC 7 cut(s) 52, 134, 476, 862, 1020, 1214, 2096
PstI CTGCAG 3 cut(s) 925, 1030, 1584
PsuI RGATCY 1 cut(s) 890
PsyI GACNNNGTC 1 cut(s) 1808
PvuII CAGCTG 2 cut(s) 1163, 1949
RsaI GTAC 4 cut(s) 740, 755, 1280, 1426
RsaNI GTAC 4 cut(s) 739, 754, 1279, 1425
RseI CAYNNNNRTG 2 cut(s) 792, 2072
SacI GAGCTC 2 cut(s) 541, 1618
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 3 cut(s) 1638, 1965, 2028
Sau3AI GATC 5 cut(s) 39, 604, 890, 1067, 1459
Sau96I GGNCC 7 cut(s) 52, 134, 476, 862, 1020, 1214, 2096
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 6 cut(s) 637, 1283, 1882, 1883, 1904, 2108
SduI GDGCHC 6 cut(s) 541, 661, 826, 1618, 1839, 1882
SfaNI GCATC 5 cut(s) 1000, 1324, 1612, 1930, 2021
SfcI CTRYAG 5 cut(s) 775, 921, 1026, 1580, 1740
SfiI GGCCNNNNNGGCC 1 cut(s) 1922
SfuI TTCGAA 1 cut(s) 364
SgrAI CRCCGGYG 1 cut(s) 2084
SinI GGWCC 4 cut(s) 52, 476, 862, 1214
SmaI CCCGGG 1 cut(s) 1883
SmiMI CAYNNNNRTG 2 cut(s) 792, 2072
SmlI CTYRAG 7 cut(s) 34, 164, 292, 491, 851, 1135, 1494
SmoI CTYRAG 7 cut(s) 34, 164, 292, 491, 851, 1135, 1494
Sse9I AATT 8 cut(s) 90, 445, 709, 1058, 1195, 1233, 1639, 2037
SsiI CCGC 5 cut(s) 648, 667, 1023, 1913, 2082
SspMI CTAG 7 cut(s) 747, 771, 1338, 1469, 1476, 1671, 1823
SstI GAGCTC 2 cut(s) 541, 1618
StyD4I CCNGG 6 cut(s) 635, 1281, 1880, 1881, 1902, 2106
StyI CCWWGG 3 cut(s) 100, 2042, 2059
TaaI ACNGT 8 cut(s) 473, 629, 1109, 1291, 1735, 1766, 1775, 1853
TaiI ACGT 2 cut(s) 417, 1191
TaqI TCGA 3 cut(s) 272, 364, 1066
TasI AATT 8 cut(s) 90, 445, 709, 1058, 1195, 1233, 1639, 2037
TatI WGTACW 1 cut(s) 738
TauI GCSGC 3 cut(s) 1025, 1916, 2084
TfiI GAWTC 5 cut(s) 5, 160, 780, 1751, 1931
Tru1I TTAA 3 cut(s) 1638, 1965, 2028
Tru9I TTAA 3 cut(s) 1638, 1965, 2028
TscAI CASTG 7 cut(s) 691, 1683, 1771, 1780, 1819, 1924, 2007
TseFI GTSAC 2 cut(s) 1413, 1766
Tsp45I GTSAC 2 cut(s) 1413, 1766
TspDTI ATGAA 8 cut(s) 27, 420, 438, 458, 891, 995, 1118, 1923
TspGWI ACGGA 1 cut(s) 670
TspMI CCCGGG 1 cut(s) 1881
TspRI CASTG 7 cut(s) 691, 1683, 1771, 1780, 1819, 1924, 2007
Tth111I GACNNNGTC 1 cut(s) 1808
Van91I CCANNNNNTGG 3 cut(s) 596, 833, 937
VpaK11BI GGWCC 4 cut(s) 52, 476, 862, 1214
VspI ATTAAT 1 cut(s) 1638
XapI RAATTY 5 cut(s) 445, 709, 1058, 1233, 2037
XceI RCATGY 1 cut(s) 1504
XcmI CCANNNNNNNNNTGG 1 cut(s) 1999
XmaI CCCGGG 1 cut(s) 1881
XmnI GAANNNNTTC 1 cut(s) 882
XspI CTAG 7 cut(s) 747, 771, 1338, 1469, 1476, 1671, 1823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.