AT1G09795

ATP phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
3173534 .. 3176910
3377 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G09795.1

Sequence Viewer

Length: 1242 bp
ATGCCAATCTCAATTCCCCTTAACGCCACTCTACAATACTCGTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTCTCGTACCTTCTTCCCCTCTTTTCTCTCCGATTCCTTCAACCACTGTTTCCCTTACCGGAATTCGCCAGCGATGCCTCAGGATGGTCACTTCTTGCGTCTCCAACGCTCAGAAATCCGTCCTGAATGGTGCCACCGATTCCGTCTCTGTCGTCGGGCGGGAGCAGATTCGTCTTGGTCTTCCTAGCAAAGGACGCATGGCCGCCGATTCGCTGGATCTTCTCAAGGATTGCCAATTGTTTGTCAAACAAGTCAATCCACGACAATATGTTGCTCAAATTCCTCAGTTACCAAATACTGAAGTTTGGTTTCAACGACCAAAAGACATTGTCAGAAAGTTGCTATCAGGAGATCTGGATCTAGGCATCGTTGGTCTTGACATAGTTGGTGAATTTGGTCAGGGAAATGAAGATCTTATCATTGTCCACGAAGCTCTCAACTTTGGAGATTGTCATCTCTCCCTTGCCATACCCAATTATGGAATATTTGAGAATATAAAATCTCTGAAGGAGCTAGCACAAATGCCTCAATGGACCGAGGAAAGACCTTTACGAGTTGCTACAGGATTCACTTATCTAGGCCCCAAATTTATGAAAGACAACGGTATAAAGCATGTGACTTTCTCAACTGCAGATGGAGCCCTAGAGGCAGCGCCTGCGATGGGGATAGCTGATGCCATTTTAGACCTTGTGAGCAGTGGGACAACCCTTAAAGAGAACAACTTAAAAGAAATTGAAGGAGGGGTTGTGCTGGAAAGTCAGGCTGCACTAGTGGCGAGTAGAAGGGCATTGACTGAGAGAAAAGGAGCACTAGAAACAGTGCATGAGATTCTCGAGAGATTAGAGGCTCATTTGAAGGCAAATGGTCAATTCACTGTGGTTGCAAACATGAGAGGAACGGATGCTGAAGAAGTGGCTGAACGTGTGAAAACCCAACCATCACTATCAGGATTGCAGGGACCAACAATAAGTCCAGTTTATTGTAAACGAGATGGAAAAGTAACAATTGAGTACTATGCCATTGTGATATGTGTACCAAAAAAAGCGCTTTATGAGTCTGTGCAGCAACTGAGAGCGGTGGGAGGAAGTGGGGTACTAGTTTCTCCTGTAACATACATTTTTCATGAGGAGACTCCCAGATGGAGTCAGCTTCTGAGTAACCTCGGCCTTTGA

Protein Analysis

413

Amino Acids

44.76

Weight (kDa)

6.35

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisG PF01634 129 - 305 1.8e-38 ATP phosphoribosyltransferase
HisG_C PF08029 310 - 394 8.1e-12 HisG, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 200
AccBSI CCGCTC 1 cut(s) 1145
AciI CCGC 3 cut(s) 229, 273, 1145
AclWI GGATC 2 cut(s) 294, 435
AcoI YGGCCR 1 cut(s) 270
AcsI RAATTY 4 cut(s) 132, 348, 461, 656
AcuI CTGAAG 3 cut(s) 390, 596, 996
AfaI GTAC 4 cut(s) 78, 1082, 1104, 1164
AfeI AGCGCT 1 cut(s) 1116
AfiI CCNNNNNNNGG 4 cut(s) 154, 260, 548, 731
AflIII ACRYGT 1 cut(s) 991
AgsI TTSAA 4 cut(s) 111, 383, 806, 925
AhlI ACTAGT 2 cut(s) 838, 1165
AluBI AGCT 4 cut(s) 503, 583, 740, 1219
AluI AGCT 4 cut(s) 503, 583, 740, 1219
Alw21I GWGCWC 1 cut(s) 880
Alw26I GTCTC 4 cut(s) 48, 175, 220, 1193
AlwI GGATC 2 cut(s) 294, 435
AlwNI CAGNNNCTG 3 cut(s) 725, 1138, 1222
Ama87I CYCGRG 1 cut(s) 902
Aor51HI AGCGCT 1 cut(s) 1116
AoxI GGCC 3 cut(s) 270, 649, 1234
ApeKI GCWGC 3 cut(s) 719, 833, 1132
ApoI RAATTY 4 cut(s) 132, 348, 461, 656
AspLEI GCGC 2 cut(s) 724, 1117
AspS9I GGNCC 3 cut(s) 603, 650, 1028
AsuHPI GGTGA 1 cut(s) 470
AsuNHI GCTAGC 1 cut(s) 583
AvaI CYCGRG 1 cut(s) 902
AvaII GGWCC 2 cut(s) 603, 1028
AxyI CCTNAGG 1 cut(s) 149
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 1 cut(s) 712
BbsI GAAGAC 1 cut(s) 242
Bbv12I GWGCWC 1 cut(s) 880
BbvI GCAGC 3 cut(s) 731, 820, 1144
BccI CCATC 6 cut(s) 148, 698, 724, 1015, 1055, 1203
BcoDI GTCTC 4 cut(s) 48, 175, 220, 1193
BcuI ACTAGT 2 cut(s) 838, 1165
BfaI CTAG 8 cut(s) 255, 431, 584, 647, 713, 839, 881, 1166
BfmI CTRYAG 2 cut(s) 630, 699
BfoI RGCGCY 2 cut(s) 725, 1118
BglI GCCNNNNNGGC 1 cut(s) 716
BglII AGATCT 2 cut(s) 421, 481
BisI GCNGC 4 cut(s) 273, 720, 834, 1133
BlsI GCNGC 4 cut(s) 274, 721, 835, 1134
BmcAI AGTACT 1 cut(s) 1082
Bme18I GGWCC 2 cut(s) 603, 1028
BmeT110I CYCGRG 1 cut(s) 902
BmgT120I GGNCC 3 cut(s) 603, 650, 1028
BmiI GGNNCC 4 cut(s) 202, 652, 709, 1029
BmsI GCATC 4 cut(s) 134, 444, 733, 961
BmtI GCTAGC 1 cut(s) 587
BpiI GAAGAC 1 cut(s) 242
BpuEI CTTGAG 1 cut(s) 278
BsaBI GATNNNNATC 2 cut(s) 426, 522
BsaJI CCNNGG 2 cut(s) 606, 1231
BsaWI WCCGGW 1 cut(s) 128
BsaXI ACNNNNNCTCC 2 cut(s) 801, 831
Bsc4I CCNNNNNNNGG 4 cut(s) 154, 260, 548, 731
Bse1I ACTGG 1 cut(s) 1043
Bse21I CCTNAGG 1 cut(s) 149
Bse8I GATNNNNATC 2 cut(s) 426, 522
BseDI CCNNGG 2 cut(s) 606, 1231
BseGI GGATG 2 cut(s) 159, 976
BseJI GATNNNNATC 2 cut(s) 426, 522
BseLI CCNNNNNNNGG 4 cut(s) 154, 260, 548, 731
BseMII CTCAG 6 cut(s) 163, 194, 368, 855, 1130, 1214
BseNI ACTGG 1 cut(s) 1043
BseRI GAGGAG 1 cut(s) 1211
BseXI GCAGC 3 cut(s) 731, 820, 1144
BsgI GTGCAG 2 cut(s) 819, 1151
BshFI GGCC 3 cut(s) 272, 651, 1236
BshNI GGYRCC 1 cut(s) 200
BsiHKAI GWGCWC 1 cut(s) 880
BsiHKCI CYCGRG 1 cut(s) 902
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 2 cut(s) 784, 1041
BslI CCNNNNNNNGG 4 cut(s) 154, 260, 548, 731
BsmAI GTCTC 4 cut(s) 48, 175, 220, 1193
BsmBI CGTCTC 3 cut(s) 48, 175, 220
BsmFI GGGAC 2 cut(s) 784, 1041
BsnI GGCC 3 cut(s) 272, 651, 1236
BsoBI CYCGRG 1 cut(s) 902
Bsp1286I GDGCHC 2 cut(s) 712, 880
Bsp143I GATC 4 cut(s) 286, 421, 427, 481
BspACI CCGC 3 cut(s) 229, 273, 1145
BspANI GGCC 3 cut(s) 272, 651, 1236
BspCNI CTCAG 6 cut(s) 162, 193, 367, 856, 1131, 1215
BspHI TCATGA 1 cut(s) 1192
BspLI GGNNCC 4 cut(s) 202, 652, 709, 1029
BspMAI CTGCAG 1 cut(s) 703
BspOI GCTAGC 1 cut(s) 587
BspPI GGATC 2 cut(s) 294, 435
BspT107I GGYRCC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 1145
BsrI ACTGG 1 cut(s) 1043
BssECI CCNNGG 2 cut(s) 606, 1231
BssMI GATC 4 cut(s) 286, 421, 427, 481
Bst4CI ACNGT 4 cut(s) 118, 674, 889, 946
BstAPI GCANNNNNTGC 1 cut(s) 725
BstC8I GCNNGC 3 cut(s) 140, 585, 726
BstDEI CTNAG 6 cut(s) 149, 180, 354, 864, 1139, 1223
BstENI CCTNNNNNAGG 1 cut(s) 258
BstF5I GGATG 2 cut(s) 159, 976
BstH2I RGCGCY 2 cut(s) 725, 1118
BstHHI GCGC 2 cut(s) 724, 1117
BstKTI GATC 4 cut(s) 289, 424, 430, 484
BstMAI GTCTC 4 cut(s) 48, 175, 220, 1193
BstMBI GATC 4 cut(s) 286, 421, 427, 481
BstMWI GCNNNNNNNGC 6 cut(s) 144, 264, 707, 716, 725, 842
BstNSI RCATGY 1 cut(s) 686
BstSFI CTRYAG 2 cut(s) 630, 699
BstV1I GCAGC 3 cut(s) 731, 820, 1144
BstV2I GAAGAC 1 cut(s) 242
BstX2I RGATCY 4 cut(s) 286, 421, 427, 481
BstYI RGATCY 4 cut(s) 286, 421, 427, 481
Bsu36I CCTNAGG 1 cut(s) 149
BsuRI GGCC 3 cut(s) 272, 651, 1236
BtgZI GCGATG 2 cut(s) 157, 743
BtsCI GGATG 2 cut(s) 159, 976
BtsI GCAGTG 1 cut(s) 772
BtsIMutI CAGTG 4 cut(s) 114, 772, 894, 942
Cac8I GCNNGC 3 cut(s) 140, 585, 726
CaiI CAGNNNCTG 3 cut(s) 725, 1138, 1222
CciI TCATGA 1 cut(s) 1192
CfoI GCGC 2 cut(s) 724, 1117
Cfr13I GGNCC 3 cut(s) 603, 650, 1028
CseI GACGC 2 cut(s) 157, 273
Csp6I GTAC 4 cut(s) 77, 1081, 1103, 1163
CviAII CATG 5 cut(s) 268, 683, 893, 958, 1193
CviQI GTAC 4 cut(s) 77, 1081, 1103, 1163
DdeI CTNAG 6 cut(s) 149, 180, 354, 864, 1139, 1223
DpnI GATC 4 cut(s) 288, 423, 429, 483
DpnII GATC 4 cut(s) 286, 421, 427, 481
EaeI YGGCCR 1 cut(s) 270
Eco24I GRGCYC 1 cut(s) 712
Eco47I GGWCC 2 cut(s) 603, 1028
Eco47III AGCGCT 1 cut(s) 1116
Eco57I CTGAAG 3 cut(s) 390, 596, 996
Eco81I CCTNAGG 1 cut(s) 149
Eco88I CYCGRG 1 cut(s) 902
EcoNI CCTNNNNNAGG 1 cut(s) 258
EcoO109I RGGNCCY 1 cut(s) 650
EcoRI GAATTC 1 cut(s) 132
EcoT38I GRGCYC 1 cut(s) 712
Esp3I CGTCTC 3 cut(s) 48, 175, 220
FaeI CATG 5 cut(s) 271, 686, 896, 961, 1196
FaqI GGGAC 2 cut(s) 784, 1041
FatI CATG 5 cut(s) 267, 682, 892, 957, 1192
FauI CCCGC 1 cut(s) 222
Fnu4HI GCNGC 4 cut(s) 273, 720, 834, 1133
FokI GGATG 2 cut(s) 166, 983
FriOI GRGCYC 1 cut(s) 712
Fsp4HI GCNGC 4 cut(s) 273, 720, 834, 1133
FspBI CTAG 8 cut(s) 255, 431, 584, 647, 713, 839, 881, 1166
GlaI GCGC 2 cut(s) 723, 1116
GluI GCNGC 4 cut(s) 273, 720, 834, 1133
HaeII RGCGCY 2 cut(s) 725, 1118
HaeIII GGCC 3 cut(s) 272, 651, 1236
HapII CCGG 1 cut(s) 129
HgaI GACGC 2 cut(s) 157, 273
HhaI GCGC 2 cut(s) 724, 1117
Hin1II CATG 5 cut(s) 271, 686, 896, 961, 1196
Hin6I GCGC 2 cut(s) 722, 1115
HinP1I GCGC 2 cut(s) 722, 1115
HinfI GANTC 9 cut(s) 103, 209, 238, 278, 636, 898, 1124, 1201, 1213
HpaII CCGG 1 cut(s) 129
HphI GGTGA 1 cut(s) 470
Hpy166II GTNNAC 3 cut(s) 496, 1055, 1103
Hpy188I TCNGA 5 cut(s) 102, 183, 404, 576, 1224
Hpy188III TCNNGA 9 cut(s) 151, 193, 417, 425, 446, 902, 904, 1017, 1193
Hpy8I GTNNAC 3 cut(s) 496, 1055, 1103
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 7 cut(s) 57, 90, 117, 571, 800, 846, 919
HpyCH4III ACNGT 4 cut(s) 118, 674, 889, 946
HpyCH4IV ACGT 1 cut(s) 991
HpyCH4V TGCA 6 cut(s) 701, 836, 892, 953, 1024, 1132
HpyF10VI GCNNNNNNNGC 6 cut(s) 144, 264, 707, 716, 725, 842
HpyF3I CTNAG 6 cut(s) 149, 180, 354, 864, 1139, 1223
HpySE526I ACGT 1 cut(s) 991
Hsp92II CATG 5 cut(s) 271, 686, 896, 961, 1196
HspAI GCGC 2 cut(s) 722, 1115
Kzo9I GATC 4 cut(s) 286, 421, 427, 481
LmnI GCTCC 4 cut(s) 232, 580, 707, 875
Lsp1109I GCAGC 3 cut(s) 731, 820, 1144
LweI GCATC 4 cut(s) 134, 444, 733, 961
MaeI CTAG 8 cut(s) 255, 431, 584, 647, 713, 839, 881, 1166
MaeII ACGT 1 cut(s) 991
MaeIII GTNAC 6 cut(s) 157, 357, 685, 1069, 1177, 1226
MalI GATC 4 cut(s) 288, 423, 429, 483
MbiI CCGCTC 1 cut(s) 1145
MboI GATC 4 cut(s) 286, 421, 427, 481
MfeI CAATTG 2 cut(s) 305, 1074
MflI RGATCY 4 cut(s) 286, 421, 427, 481
MhlI GDGCHC 2 cut(s) 712, 880
MlyI GAGTC 3 cut(s) 1133, 1195, 1222
MmeI TCCRAC 1 cut(s) 198
MseI TTAA 3 cut(s) 21, 780, 794
MspI CCGG 1 cut(s) 129
MunI CAATTG 2 cut(s) 305, 1074
MwoI GCNNNNNNNGC 6 cut(s) 144, 264, 707, 716, 725, 842
NdeII GATC 4 cut(s) 286, 421, 427, 481
NheI GCTAGC 1 cut(s) 583
NlaIII CATG 5 cut(s) 271, 686, 896, 961, 1196
NlaIV GGNNCC 4 cut(s) 202, 652, 709, 1029
NmeAIII GCCGAG 1 cut(s) 1212
NmuCI GTSAC 2 cut(s) 157, 685
NspI RCATGY 1 cut(s) 686
PaeR7I CTCGAG 1 cut(s) 902
PagI TCATGA 1 cut(s) 1192
PfeI GAWTC 6 cut(s) 103, 209, 238, 278, 636, 898
PflFI GACNNNGTC 1 cut(s) 398
PkrI GCNGC 4 cut(s) 274, 721, 835, 1134
PleI GAGTC 3 cut(s) 1132, 1195, 1221
PpsI GAGTC 3 cut(s) 1132, 1195, 1221
PspN4I GGNNCC 4 cut(s) 202, 652, 709, 1029
PspPI GGNCC 3 cut(s) 603, 650, 1028
PstI CTGCAG 1 cut(s) 703
PstNI CAGNNNCTG 3 cut(s) 725, 1138, 1222
PsuI RGATCY 4 cut(s) 286, 421, 427, 481
PsyI GACNNNGTC 1 cut(s) 398
RsaI GTAC 4 cut(s) 78, 1082, 1104, 1164
RsaNI GTAC 4 cut(s) 77, 1081, 1103, 1163
SaqAI TTAA 3 cut(s) 21, 780, 794
SatI GCNGC 4 cut(s) 273, 720, 834, 1133
Sau3AI GATC 4 cut(s) 286, 421, 427, 481
Sau96I GGNCC 3 cut(s) 603, 650, 1028
ScaI AGTACT 1 cut(s) 1082
SchI GAGTC 3 cut(s) 1133, 1195, 1222
SduI GDGCHC 2 cut(s) 712, 880
SetI ASST 9 cut(s) 82, 505, 585, 619, 742, 759, 994, 1221, 1233
SfaNI GCATC 4 cut(s) 134, 444, 733, 961
SfcI CTRYAG 2 cut(s) 630, 699
Sfr274I CTCGAG 1 cut(s) 902
SinI GGWCC 2 cut(s) 603, 1028
SlaI CTCGAG 1 cut(s) 902
SmlI CTYRAG 2 cut(s) 293, 902
SmoI CTYRAG 2 cut(s) 293, 902
SpeI ACTAGT 2 cut(s) 838, 1165
SsiI CCGC 3 cut(s) 229, 273, 1145
SspI AATATT 1 cut(s) 555
SspMI CTAG 8 cut(s) 255, 431, 584, 647, 713, 839, 881, 1166
TaaI ACNGT 4 cut(s) 118, 674, 889, 946
TaiI ACGT 1 cut(s) 994
TaqI TCGA 1 cut(s) 903
TaqII GACCGA 1 cut(s) 620
TatI WGTACW 1 cut(s) 1080
TauI GCSGC 1 cut(s) 275
TfiI GAWTC 6 cut(s) 103, 209, 238, 278, 636, 898
Tru1I TTAA 3 cut(s) 21, 780, 794
Tru9I TTAA 3 cut(s) 21, 780, 794
TscAI CASTG 4 cut(s) 121, 772, 894, 949
TseFI GTSAC 2 cut(s) 157, 685
TseI GCWGC 3 cut(s) 719, 833, 1132
Tsp45I GTSAC 2 cut(s) 157, 685
TspDTI ATGAA 3 cut(s) 492, 677, 1181
TspGWI ACGGA 3 cut(s) 178, 202, 983
TspRI CASTG 4 cut(s) 121, 772, 894, 949
Tth111I GACNNNGTC 1 cut(s) 398
VpaK11BI GGWCC 2 cut(s) 603, 1028
XagI CCTNNNNNAGG 1 cut(s) 258
XapI RAATTY 4 cut(s) 132, 348, 461, 656
XceI RCATGY 1 cut(s) 686
XhoI CTCGAG 1 cut(s) 902
XspI CTAG 8 cut(s) 255, 431, 584, 647, 713, 839, 881, 1166
ZrmI AGTACT 1 cut(s) 1082
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.