MD05G1010900.v1.1

ATP phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
2148541 .. 2152562
4022 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1010900.v1.1.491

Sequence Viewer

Length: 1152 bp
ATGTTGGCATCAAACCTGCCAAAGAGCCCCTTCTTCCCCACCCACTATGTCCCCATCTCCCGCTCCTTTCACATCACCTGCAGCGTCTCGCAGCTGCAAACGGCCGCGGCGGAAACAGTTAACGGCCGACTCTCTGAACGGAACGAGATTCGCCTCGGCCTGCCCAGCAAAGGCCGTATGGCCGCCGACACTCTTGATCTCCTCAAGGACTGCCAGCTGTCCGTCAAGCACGTCAATCCTCGCCAATACGTCGCCCAAATCCCACAGCTATCGAACTTGGAGGTGTGGTTTCAGCGGCCCAAGGACATTGTGCGGAAGTTGTTGTCTGGAGACTTGGACCTTGGCATTGCGGGTTTTGATACTGTCAGTGAATACGGAGAGGGGAATGAAGATCTTATCATTATTCATGATGCTCTTGATTATGGGGACTGCCGTTTATCCCTTGCAATTCCAAAATACGGGATTTTTGAAAATATAAATTCACTGAAGGAGCTAGCACAAATGCCTCAATGGACTAAAGAGAAACCTCTCCGAGTTGCTACTGGCTTCACCTATCTCGGTCCTAAATTTATGAAAGATAATGGATTGAACCATGTGAGTTTTTCAACTGCTGATGGAGCACTCGAGGCAGCTCCTGCGATGGGGATAGCTGATGCAATTTTGGACCTCGTGAGTAGTGGAACGACACTGAAAGAAAACAACCTCAAAGAAATTGACGGGGGAGTTGTGTTACAAAGCCAGGCAGTTCTTGTTGCAAGCAAGAGGTCATTGATCCAAAGGAAAAGCGCCCTTGACACGACACATGAGATTCTTGAAAGATTAGAGGCACATCTAAGGGCAGAGGGTCAGTTCACGGTAGTTGCAAATATGAGAGGAAACAGTGCAGAGGAAGTGGCTGAGCGAGTCTTGAGCCAGGCATCATTATCTGGTTTGCAGGGACCCACCGTAAGTCCAGTTTTTTGCAAACGTGGTGGGCAAATTGCAGTCGATTACTATGCCATAGTCATATGTGTGCCAAAAAAGGCACTCTACAAGTCCGTTCAACAACTGAGAGCGATTGGAGGCAGCGGAGTTCTAGTTTCCCCATTGACCTACATTTTCGATGAAGAGACTCCAAGATGGCGTGAACTTCTCTCAACGCTTGGCCTCTAG

Protein Analysis

384

Amino Acids

41.92

Weight (kDa)

6.41

Isoelectric Point (pI)

37.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisG PF01634 99 - 275 2.2e-37 ATP phosphoribosyltransferase
HisG_C PF08029 280 - 364 6.3e-12 HisG, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 86
Acc36I ACCTGC 2 cut(s) 24, 86
AccBSI CCGCTC 1 cut(s) 63
AccII CGCG 1 cut(s) 107
AciI CCGC 9 cut(s) 61, 105, 107, 110, 183, 295, 313, 350, 1068
AclWI GGATC 1 cut(s) 766
AcoI YGGCCR 3 cut(s) 102, 124, 180
AcsI RAATTY 2 cut(s) 478, 566
AcuI CTGAAG 1 cut(s) 506
AfiI CCNNNNNNNGG 3 cut(s) 170, 458, 641
AgsI TTSAA 5 cut(s) 470, 589, 606, 815, 1043
AjiI CACGTC 1 cut(s) 232
AjnI CCWGG 2 cut(s) 738, 912
AluBI AGCT 6 cut(s) 94, 217, 268, 493, 632, 650
AluI AGCT 6 cut(s) 94, 217, 268, 493, 632, 650
Alw21I GWGCWC 1 cut(s) 622
Alw26I GTCTC 3 cut(s) 91, 324, 1103
AlwI GGATC 1 cut(s) 766
AlwNI CAGNNNCTG 1 cut(s) 635
Ama87I CYCGRG 1 cut(s) 623
AoxI GGCC 7 cut(s) 102, 124, 157, 172, 180, 296, 1144
ApeKI GCWGC 5 cut(s) 81, 91, 94, 629, 1065
ApoI RAATTY 2 cut(s) 478, 566
AspLEI GCGC 1 cut(s) 788
AspS9I GGNCC 5 cut(s) 297, 337, 560, 664, 938
AsuHPI GGTGA 2 cut(s) 67, 541
AsuNHI GCTAGC 1 cut(s) 493
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 4 cut(s) 337, 560, 664, 938
BanII GRGCYC 1 cut(s) 29
BauI CACGAG 1 cut(s) 668
Bbv12I GWGCWC 1 cut(s) 622
BbvI GCAGC 5 cut(s) 81, 93, 103, 641, 1077
BccI CCATC 4 cut(s) 62, 608, 634, 1113
BceAI ACGGC 4 cut(s) 117, 139, 159, 417
BcgI CGANNNNNNTGC 2 cut(s) 977, 1011
BciT130I CCWGG 2 cut(s) 740, 914
BcoDI GTCTC 3 cut(s) 91, 324, 1103
BfaI CTAG 3 cut(s) 494, 1076, 1150
BfmI CTRYAG 1 cut(s) 79
BfoI RGCGCY 1 cut(s) 789
BfuAI ACCTGC 2 cut(s) 24, 86
BglII AGATCT 1 cut(s) 391
BisI GCNGC 9 cut(s) 82, 92, 95, 105, 108, 183, 296, 630, 1066
BlpI GCTNAGC 1 cut(s) 897
BlsI GCNGC 9 cut(s) 83, 93, 96, 106, 109, 184, 297, 631, 1067
Bme1390I CCNGG 2 cut(s) 740, 914
Bme18I GGWCC 4 cut(s) 337, 560, 664, 938
BmeT110I CYCGRG 1 cut(s) 623
BmgBI CACGTC 1 cut(s) 232
BmgT120I GGNCC 5 cut(s) 297, 337, 560, 664, 938
BmiI GGNNCC 2 cut(s) 939, 940
BmrFI CCNGG 2 cut(s) 740, 914
BmsI GCATC 4 cut(s) 17, 400, 643, 926
BmtI GCTAGC 1 cut(s) 497
BpmI CTGGAG 1 cut(s) 348
Bpu1102I GCTNAGC 1 cut(s) 897
BpuEI CTTGAG 2 cut(s) 188, 928
BsaJI CCNNGG 4 cut(s) 105, 154, 300, 340
BsaXI ACNNNNNCTCC 4 cut(s) 272, 302, 1062, 1092
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 458, 641
Bse1I ACTGG 2 cut(s) 547, 953
Bse3DI GCAATG 1 cut(s) 345
BseBI CCWGG 2 cut(s) 740, 914
BseDI CCNNGG 4 cut(s) 105, 154, 300, 340
BseLI CCNNNNNNNGG 3 cut(s) 170, 458, 641
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 2 cut(s) 888, 1040
BseNI ACTGG 2 cut(s) 547, 953
BseRI GAGGAG 1 cut(s) 191
BseX3I CGGCCG 2 cut(s) 102, 124
BseXI GCAGC 5 cut(s) 81, 93, 103, 641, 1077
BseYI CCCAGC 1 cut(s) 164
BsgI GTGCAG 1 cut(s) 903
Bsh1236I CGCG 1 cut(s) 107
Bsh1285I CGRYCG 2 cut(s) 105, 127
BshFI GGCC 7 cut(s) 104, 126, 159, 174, 182, 298, 1146
BsiEI CGRYCG 2 cut(s) 105, 127
BsiHKAI GWGCWC 1 cut(s) 622
BsiHKCI CYCGRG 1 cut(s) 623
BslFI GGGAC 3 cut(s) 35, 440, 951
BslI CCNNNNNNNGG 3 cut(s) 170, 458, 641
BsmAI GTCTC 3 cut(s) 91, 324, 1103
BsmBI CGTCTC 1 cut(s) 91
BsmFI GGGAC 3 cut(s) 35, 440, 951
BsnI GGCC 7 cut(s) 104, 126, 159, 174, 182, 298, 1146
BsoBI CYCGRG 1 cut(s) 623
Bsp1286I GDGCHC 2 cut(s) 29, 622
Bsp143I GATC 3 cut(s) 196, 391, 771
Bsp1720I GCTNAGC 1 cut(s) 897
BspACI CCGC 9 cut(s) 61, 105, 107, 110, 183, 295, 313, 350, 1068
BspANI GGCC 7 cut(s) 104, 126, 159, 174, 182, 298, 1146
BspCNI CTCAG 2 cut(s) 889, 1041
BspFNI CGCG 1 cut(s) 107
BspHI TCATGA 1 cut(s) 406
BspLI GGNNCC 2 cut(s) 939, 940
BspMAI CTGCAG 1 cut(s) 83
BspMI ACCTGC 2 cut(s) 24, 86
BspOI GCTAGC 1 cut(s) 497
BspPI GGATC 1 cut(s) 766
BsrBI CCGCTC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 345
BsrI ACTGG 2 cut(s) 547, 953
BssECI CCNNGG 4 cut(s) 105, 154, 300, 340
BssMI GATC 3 cut(s) 196, 391, 771
BssSI CACGAG 1 cut(s) 668
BssT1I CCWWGG 2 cut(s) 300, 340
Bst2BI CACGAG 1 cut(s) 668
Bst2UI CCWGG 2 cut(s) 740, 914
Bst4CI ACNGT 5 cut(s) 118, 364, 856, 881, 946
Bst6I CTCTTC 1 cut(s) 1101
BstAPI GCANNNNNTGC 1 cut(s) 635
BstC8I GCNNGC 4 cut(s) 161, 215, 495, 757
BstDEI CTNAG 3 cut(s) 833, 897, 1049
BstDSI CCRYGG 1 cut(s) 105
BstFNI CGCG 1 cut(s) 107
BstH2I RGCGCY 1 cut(s) 789
BstHHI GCGC 1 cut(s) 788
BstKTI GATC 3 cut(s) 199, 394, 774
BstMAI GTCTC 3 cut(s) 91, 324, 1103
BstMBI GATC 3 cut(s) 196, 391, 771
BstMCI CGRYCG 2 cut(s) 105, 127
BstMWI GCNNNNNNNGC 4 cut(s) 165, 617, 626, 635
BstNI CCWGG 2 cut(s) 740, 914
BstSCI CCNGG 2 cut(s) 738, 912
BstSFI CTRYAG 1 cut(s) 79
BstUI CGCG 1 cut(s) 107
BstV1I GCAGC 5 cut(s) 81, 93, 103, 641, 1077
BstX2I RGATCY 1 cut(s) 391
BstYI RGATCY 1 cut(s) 391
BstZI CGGCCG 2 cut(s) 102, 124
BsuRI GGCC 7 cut(s) 104, 126, 159, 174, 182, 298, 1146
BtgI CCRYGG 1 cut(s) 105
BtgZI GCGATG 1 cut(s) 653
BtrI CACGTC 1 cut(s) 232
BtsIMutI CAGTG 4 cut(s) 373, 482, 686, 886
BveI ACCTGC 2 cut(s) 24, 86
Cac8I GCNNGC 4 cut(s) 161, 215, 495, 757
CaiI CAGNNNCTG 1 cut(s) 635
CciI TCATGA 1 cut(s) 406
CfoI GCGC 1 cut(s) 788
Cfr13I GGNCC 5 cut(s) 297, 337, 560, 664, 938
Cfr42I CCGCGG 1 cut(s) 108
CseI GACGC 1 cut(s) 73
CspCI CAANNNNNGTGG 2 cut(s) 952, 987
CviAII CATG 3 cut(s) 407, 593, 803
DdeI CTNAG 3 cut(s) 833, 897, 1049
DpnI GATC 3 cut(s) 198, 393, 773
DpnII GATC 3 cut(s) 196, 391, 771
EaeI YGGCCR 3 cut(s) 102, 124, 180
EagI CGGCCG 2 cut(s) 102, 124
Eam1104I CTCTTC 1 cut(s) 1101
EarI CTCTTC 1 cut(s) 1101
EciI GGCGGA 1 cut(s) 125
EclXI CGGCCG 2 cut(s) 102, 124
Eco130I CCWWGG 2 cut(s) 300, 340
Eco24I GRGCYC 1 cut(s) 29
Eco47I GGWCC 4 cut(s) 337, 560, 664, 938
Eco52I CGGCCG 2 cut(s) 102, 124
Eco57I CTGAAG 1 cut(s) 506
Eco88I CYCGRG 1 cut(s) 623
EcoO109I RGGNCCY 1 cut(s) 938
EcoRII CCWGG 2 cut(s) 738, 912
EcoT14I CCWWGG 2 cut(s) 300, 340
EcoT38I GRGCYC 1 cut(s) 29
ErhI CCWWGG 2 cut(s) 300, 340
Esp3I CGTCTC 1 cut(s) 91
FaeI CATG 3 cut(s) 410, 596, 806
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 3 cut(s) 35, 440, 951
FatI CATG 3 cut(s) 406, 592, 802
FauI CCCGC 2 cut(s) 68, 343
FauNDI CATATG 1 cut(s) 1007
Fnu4HI GCNGC 9 cut(s) 82, 92, 95, 105, 108, 183, 296, 630, 1066
FriOI GRGCYC 1 cut(s) 29
Fsp4HI GCNGC 9 cut(s) 82, 92, 95, 105, 108, 183, 296, 630, 1066
FspBI CTAG 3 cut(s) 494, 1076, 1150
GlaI GCGC 1 cut(s) 787
GluI GCNGC 9 cut(s) 82, 92, 95, 105, 108, 183, 296, 630, 1066
GsaI CCCAGC 1 cut(s) 168
GsuI CTGGAG 1 cut(s) 348
HaeII RGCGCY 1 cut(s) 789
HaeIII GGCC 7 cut(s) 104, 126, 159, 174, 182, 298, 1146
HgaI GACGC 1 cut(s) 73
HhaI GCGC 1 cut(s) 788
Hin1II CATG 3 cut(s) 410, 596, 806
Hin6I GCGC 1 cut(s) 786
HinP1I GCGC 1 cut(s) 786
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 5 cut(s) 129, 148, 808, 903, 1111
HpaI GTTAAC 1 cut(s) 121
HphI GGTGA 2 cut(s) 67, 541
Hpy166II GTNNAC 3 cut(s) 121, 852, 1127
Hpy188I TCNGA 2 cut(s) 136, 533
Hpy188III TCNNGA 7 cut(s) 194, 327, 407, 416, 670, 812, 907
Hpy8I GTNNAC 3 cut(s) 121, 852, 1127
Hpy99I CGWCG 1 cut(s) 254
HpyAV CCTTC 2 cut(s) 40, 481
HpyCH4III ACNGT 5 cut(s) 118, 364, 856, 881, 946
HpyCH4IV ACGT 3 cut(s) 231, 249, 967
HpyF10VI GCNNNNNNNGC 4 cut(s) 165, 617, 626, 635
HpyF3I CTNAG 3 cut(s) 833, 897, 1049
HpySE526I ACGT 3 cut(s) 231, 249, 967
Hsp92II CATG 3 cut(s) 410, 596, 806
HspAI GCGC 1 cut(s) 786
KflI GGGWCCC 1 cut(s) 938
KspAI GTTAAC 1 cut(s) 121
KspI CCGCGG 1 cut(s) 108
Kzo9I GATC 3 cut(s) 196, 391, 771
LmnI GCTCC 4 cut(s) 68, 490, 617, 637
Lsp1109I GCAGC 5 cut(s) 81, 93, 103, 641, 1077
LweI GCATC 4 cut(s) 17, 400, 643, 926
MaeI CTAG 3 cut(s) 494, 1076, 1150
MaeII ACGT 3 cut(s) 231, 249, 967
MaeIII GTNAC 1 cut(s) 729
MalI GATC 3 cut(s) 198, 393, 773
MbiI CCGCTC 1 cut(s) 63
MboI GATC 3 cut(s) 196, 391, 771
MboII GAAGA 3 cut(s) 25, 401, 1118
MflI RGATCY 1 cut(s) 391
MhlI GDGCHC 2 cut(s) 29, 622
MluCI AATT 6 cut(s) 447, 478, 566, 657, 711, 978
MlyI GAGTC 3 cut(s) 123, 912, 1105
MseI TTAA 1 cut(s) 120
MslI CAYNNNNRTG 1 cut(s) 1010
MspA1I CMGCKG 5 cut(s) 94, 107, 217, 295, 1068
MspR9I CCNGG 2 cut(s) 740, 914
MvaI CCWGG 2 cut(s) 740, 914
MvnI CGCG 1 cut(s) 107
MwoI GCNNNNNNNGC 4 cut(s) 165, 617, 626, 635
NdeI CATATG 1 cut(s) 1007
NdeII GATC 3 cut(s) 196, 391, 771
NheI GCTAGC 1 cut(s) 493
NlaIII CATG 3 cut(s) 410, 596, 806
NlaIV GGNNCC 2 cut(s) 939, 940
NmeAIII GCCGAG 1 cut(s) 135
PaeR7I CTCGAG 1 cut(s) 623
PagI TCATGA 1 cut(s) 406
PaqCI CACCTGC 1 cut(s) 86
PfeI GAWTC 2 cut(s) 148, 808
PkrI GCNGC 9 cut(s) 83, 93, 96, 106, 109, 184, 297, 631, 1067
PleI GAGTC 3 cut(s) 123, 911, 1105
PpsI GAGTC 3 cut(s) 123, 911, 1105
PpuMI RGGWCCY 1 cut(s) 938
Psp5II RGGWCCY 1 cut(s) 938
Psp6I CCWGG 2 cut(s) 738, 912
PspFI CCCAGC 1 cut(s) 164
PspGI CCWGG 2 cut(s) 738, 912
PspN4I GGNNCC 2 cut(s) 939, 940
PspPI GGNCC 5 cut(s) 297, 337, 560, 664, 938
PspPPI RGGWCCY 1 cut(s) 938
PspXI VCTCGAGB 1 cut(s) 623
PstI CTGCAG 1 cut(s) 83
PstNI CAGNNNCTG 1 cut(s) 635
PsuI RGATCY 1 cut(s) 391
PvuII CAGCTG 2 cut(s) 94, 217
RseI CAYNNNNRTG 1 cut(s) 1010
SacII CCGCGG 1 cut(s) 108
SaqAI TTAA 1 cut(s) 120
SatI GCNGC 9 cut(s) 82, 92, 95, 105, 108, 183, 296, 630, 1066
Sau3AI GATC 3 cut(s) 196, 391, 771
Sau96I GGNCC 5 cut(s) 297, 337, 560, 664, 938
SchI GAGTC 3 cut(s) 123, 912, 1105
ScrFI CCNGG 2 cut(s) 740, 914
SduI GDGCHC 2 cut(s) 29, 622
SfaNI GCATC 4 cut(s) 17, 400, 643, 926
SfcI CTRYAG 1 cut(s) 79
Sfr274I CTCGAG 1 cut(s) 623
Sfr303I CCGCGG 1 cut(s) 108
SgrBI CCGCGG 1 cut(s) 108
SinI GGWCC 4 cut(s) 337, 560, 664, 938
SlaI CTCGAG 1 cut(s) 623
SmiMI CAYNNNNRTG 1 cut(s) 1010
SmlI CTYRAG 3 cut(s) 203, 623, 907
SmoI CTYRAG 3 cut(s) 203, 623, 907
Sse9I AATT 6 cut(s) 447, 478, 566, 657, 711, 978
SsiI CCGC 9 cut(s) 61, 105, 107, 110, 183, 295, 313, 350, 1068
SspMI CTAG 3 cut(s) 494, 1076, 1150
StyD4I CCNGG 2 cut(s) 738, 912
StyI CCWWGG 2 cut(s) 300, 340
TaaI ACNGT 5 cut(s) 118, 364, 856, 881, 946
TaiI ACGT 3 cut(s) 234, 252, 970
TaqI TCGA 4 cut(s) 272, 624, 987, 1101
TaqII GACCGA 1 cut(s) 548
TasI AATT 6 cut(s) 447, 478, 566, 657, 711, 978
TauI GCSGC 4 cut(s) 107, 110, 185, 298
TfiI GAWTC 2 cut(s) 148, 808
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TscAI CASTG 4 cut(s) 373, 489, 693, 886
TseI GCWGC 5 cut(s) 81, 91, 94, 629, 1065
TspDTI ATGAA 4 cut(s) 395, 402, 587, 1119
TspGWI ACGGA 4 cut(s) 154, 211, 390, 1027
TspRI CASTG 4 cut(s) 373, 489, 693, 886
VpaK11BI GGWCC 4 cut(s) 337, 560, 664, 938
XapI RAATTY 2 cut(s) 478, 566
XhoI CTCGAG 1 cut(s) 623
XspI CTAG 3 cut(s) 494, 1076, 1150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.