MD10G1009700.v1.1

ATP phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
1344170 .. 1348726
4557 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1009700.v1.1.491

Sequence Viewer

Length: 1149 bp
ATGTTGGCATCAAACCTGCCAAAGAGCCCCTTCTTCCCCACCCGCTATGTCCCGGTCTCCCCCTCCTTCCACATCACCTGCAGCGTCTCGCAGCTGCAATCGGCGGCGGAAGCAGTGAACGGCAGAGTTGCCGAACGGAACGAGATTCGCCTCGGCTTGCCCAGCAAAGGCCGTATGGCTGCCGACACTCTTGATCTCCTCAAGGACTGCCAGCTGTCCGTCAAGCACGTCAATCCTCGTCAATACGTCGCCCAAATCCCTCAGCTTTCGGACTTGGAGGTGTGGTTTCAACGGCCGAAGGACATTGTGCGGAAATTGTTGTCCGGAGACTTGGACCTTGGCATTGCGGGTTTTGATACTGTCAGTGAATACGGAGAGGGGAATGAAGATCTTATCATTGTTCATGATGCTCTTGATTATGGGGACTGCCGTTTATCCCTTGCAATTCCGAAATATGGGATTTTTGAAAATATAAATTCACTGACAGAGCTAGCACAAATGCCTCAATGGAATAAAGAGAAACCTCTCCGAGTTGCTACTGGCTTCACCTATCTTGGTCCTAAATTTATGAAAGATAATGGATTGAACCATGTGAGTTTTTCAACTGCTGATGGAGCACTCGAGGCAGCTCCTGCGATGGGGATAGCTGATGCAATTTTGGACCTCGTGAGTAGTGGGACGACGCTGAAGGAGAACAACCTAAAAGAGATTGATGGGGGAGTTGTGTTACAAAGCCAGGCAGTTCTTGTTGCAAGCAAGAAGTCATTGATCCAAAGGAAAAGCGCCCTTGACACGACACATGAGATTCTTGAAAGATTAGAGGCACATCTAAGGGCTCAGGGTCAGTTCACGGTAACTGCAAATATGAGAGGAAATAGTGCAGCGGAAGTGGCTGAGCGAGTCTTGAGCCAGCCATCATTATCTGGTTTGCAGGGACCCACCATAAGTCCAGTTTTTTGCAAACGTGGTGGGCAAATTGCAGCCGATTACTATGCCATAGTCATATGTGTACCAAAAAAGGCACTCTACAAGTCCGTTCAACAACTGAGAGCGATTGGAGGCAGCGGAGTTCTAATTTCCCCATTGACCTACATTTTTGATGAAGAAACACCAAGATGGCGTGAACTTCTCACAAAGCTTGGCCTCTAG

Protein Analysis

383

Amino Acids

41.68

Weight (kDa)

6.62

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisG PF01634 98 - 274 1.4e-37 ATP phosphoribosyltransferase
HisG_C PF08029 279 - 363 6.8e-12 HisG, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 86
Acc36I ACCTGC 2 cut(s) 24, 86
AccIII TCCGGA 1 cut(s) 323
AciI CCGC 7 cut(s) 43, 104, 107, 310, 347, 884, 1065
AclWI GGATC 1 cut(s) 763
AcoI YGGCCR 1 cut(s) 293
AcsI RAATTY 2 cut(s) 475, 563
AcuI CTGAAG 1 cut(s) 707
AfaI GTAC 1 cut(s) 1011
AfiI CCNNNNNNNGG 3 cut(s) 167, 455, 638
AgsI TTSAA 6 cut(s) 290, 467, 586, 603, 812, 1040
AjiI CACGTC 1 cut(s) 229
AjnI CCWGG 1 cut(s) 735
AluBI AGCT 7 cut(s) 94, 214, 265, 490, 629, 647, 1138
AluI AGCT 7 cut(s) 94, 214, 265, 490, 629, 647, 1138
Alw21I GWGCWC 1 cut(s) 619
Alw26I GTCTC 3 cut(s) 61, 91, 321
AlwI GGATC 1 cut(s) 763
AlwNI CAGNNNCTG 1 cut(s) 632
Ama87I CYCGRG 1 cut(s) 620
Aor13HI TCCGGA 1 cut(s) 323
AoxI GGCC 3 cut(s) 169, 293, 1141
ApeKI GCWGC 8 cut(s) 81, 91, 94, 179, 626, 881, 980, 1062
ApoI RAATTY 2 cut(s) 475, 563
AspLEI GCGC 1 cut(s) 785
AspS9I GGNCC 4 cut(s) 334, 557, 661, 935
AsuC2I CCSGG 1 cut(s) 53
AsuHPI GGTGA 2 cut(s) 67, 538
AsuNHI GCTAGC 1 cut(s) 490
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 4 cut(s) 334, 557, 661, 935
BanII GRGCYC 2 cut(s) 29, 838
BauI CACGAG 1 cut(s) 665
Bbv12I GWGCWC 1 cut(s) 619
BbvCI CCTCAGC 1 cut(s) 261
BbvI GCAGC 8 cut(s) 81, 93, 103, 166, 638, 893, 992, 1074
BccI CCATC 5 cut(s) 605, 631, 707, 922, 1110
BceAI ACGGC 4 cut(s) 136, 156, 308, 414
BcgI CGANNNNNNTGC 2 cut(s) 974, 1008
BciT130I CCWGG 1 cut(s) 737
BcnI CCSGG 1 cut(s) 53
BcoDI GTCTC 3 cut(s) 61, 91, 321
BfaI CTAG 2 cut(s) 491, 1147
BfmI CTRYAG 1 cut(s) 79
BfoI RGCGCY 1 cut(s) 786
BfuAI ACCTGC 2 cut(s) 24, 86
BglII AGATCT 1 cut(s) 388
BisI GCNGC 9 cut(s) 82, 92, 95, 105, 180, 627, 882, 981, 1063
BlpI GCTNAGC 1 cut(s) 894
BlsI GCNGC 9 cut(s) 83, 93, 96, 106, 181, 628, 883, 982, 1064
Bme1390I CCNGG 2 cut(s) 53, 737
Bme18I GGWCC 4 cut(s) 334, 557, 661, 935
BmeT110I CYCGRG 1 cut(s) 620
BmgBI CACGTC 1 cut(s) 229
BmgT120I GGNCC 4 cut(s) 334, 557, 661, 935
BmiI GGNNCC 2 cut(s) 936, 937
BmrFI CCNGG 2 cut(s) 53, 737
BmsI GCATC 3 cut(s) 17, 397, 640
BmtI GCTAGC 1 cut(s) 494
Bpu10I CCTNAGC 2 cut(s) 261, 837
Bpu1102I GCTNAGC 1 cut(s) 894
BpuEI CTTGAG 2 cut(s) 185, 925
BpuMI CCSGG 1 cut(s) 53
BsaI GGTCTC 1 cut(s) 61
BsaJI CCNNGG 2 cut(s) 151, 337
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 2 cut(s) 269, 299
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 455, 638
Bse1I ACTGG 2 cut(s) 544, 950
Bse3DI GCAATG 1 cut(s) 342
BseAI TCCGGA 1 cut(s) 323
BseBI CCWGG 1 cut(s) 737
BseDI CCNNGG 2 cut(s) 151, 337
BseLI CCNNNNNNNGG 3 cut(s) 167, 455, 638
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 4 cut(s) 275, 851, 885, 1037
BseNI ACTGG 2 cut(s) 544, 950
BseRI GAGGAG 1 cut(s) 188
BseX3I CGGCCG 1 cut(s) 293
BseXI GCAGC 8 cut(s) 81, 93, 103, 166, 638, 893, 992, 1074
BseYI CCCAGC 1 cut(s) 161
BsgI GTGCAG 1 cut(s) 900
Bsh1285I CGRYCG 1 cut(s) 296
BshFI GGCC 3 cut(s) 171, 295, 1143
BsiEI CGRYCG 1 cut(s) 296
BsiHKAI GWGCWC 1 cut(s) 619
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 2 cut(s) 53, 324
BslFI GGGAC 4 cut(s) 35, 437, 691, 948
BslI CCNNNNNNNGG 3 cut(s) 167, 455, 638
BsmAI GTCTC 3 cut(s) 61, 91, 321
BsmBI CGTCTC 1 cut(s) 91
BsmFI GGGAC 4 cut(s) 35, 437, 691, 948
BsnI GGCC 3 cut(s) 171, 295, 1143
Bso31I GGTCTC 1 cut(s) 61
BsoBI CYCGRG 1 cut(s) 620
Bsp1286I GDGCHC 3 cut(s) 29, 619, 838
Bsp13I TCCGGA 1 cut(s) 323
Bsp143I GATC 3 cut(s) 193, 388, 768
Bsp1720I GCTNAGC 1 cut(s) 894
BspACI CCGC 7 cut(s) 43, 104, 107, 310, 347, 884, 1065
BspANI GGCC 3 cut(s) 171, 295, 1143
BspCNI CTCAG 4 cut(s) 274, 850, 886, 1038
BspEI TCCGGA 1 cut(s) 323
BspHI TCATGA 1 cut(s) 403
BspLI GGNNCC 2 cut(s) 936, 937
BspMAI CTGCAG 1 cut(s) 83
BspMI ACCTGC 2 cut(s) 24, 86
BspOI GCTAGC 1 cut(s) 494
BspPI GGATC 1 cut(s) 763
BspTNI GGTCTC 1 cut(s) 61
BsrDI GCAATG 1 cut(s) 342
BsrI ACTGG 2 cut(s) 544, 950
BssECI CCNNGG 2 cut(s) 151, 337
BssMI GATC 3 cut(s) 193, 388, 768
BssSI CACGAG 1 cut(s) 665
BssT1I CCWWGG 1 cut(s) 337
Bst2BI CACGAG 1 cut(s) 665
Bst2UI CCWGG 1 cut(s) 737
Bst4CI ACNGT 2 cut(s) 361, 853
BstAPI GCANNNNNTGC 1 cut(s) 632
BstC8I GCNNGC 5 cut(s) 158, 212, 492, 754, 911
BstDEI CTNAG 5 cut(s) 261, 830, 837, 894, 1046
BstH2I RGCGCY 1 cut(s) 786
BstHHI GCGC 1 cut(s) 785
BstKTI GATC 3 cut(s) 196, 391, 771
BstMAI GTCTC 3 cut(s) 61, 91, 321
BstMBI GATC 3 cut(s) 193, 388, 768
BstMCI CGRYCG 1 cut(s) 296
BstMWI GCNNNNNNNGC 6 cut(s) 110, 162, 614, 623, 632, 890
BstNI CCWGG 1 cut(s) 737
BstSCI CCNGG 2 cut(s) 51, 735
BstSFI CTRYAG 1 cut(s) 79
BstV1I GCAGC 8 cut(s) 81, 93, 103, 166, 638, 893, 992, 1074
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BstZI CGGCCG 1 cut(s) 293
BsuRI GGCC 3 cut(s) 171, 295, 1143
BtgZI GCGATG 1 cut(s) 650
BtrI CACGTC 1 cut(s) 229
BtsI GCAGTG 1 cut(s) 120
BtsIMutI CAGTG 3 cut(s) 120, 370, 479
BveI ACCTGC 2 cut(s) 24, 86
Cac8I GCNNGC 5 cut(s) 158, 212, 492, 754, 911
CaiI CAGNNNCTG 1 cut(s) 632
CciI TCATGA 1 cut(s) 403
CfoI GCGC 1 cut(s) 785
Cfr13I GGNCC 4 cut(s) 334, 557, 661, 935
CseI GACGC 2 cut(s) 73, 691
Csp6I GTAC 1 cut(s) 1010
CspCI CAANNNNNGTGG 2 cut(s) 949, 984
CviAII CATG 3 cut(s) 404, 590, 800
CviQI GTAC 1 cut(s) 1010
DdeI CTNAG 5 cut(s) 261, 830, 837, 894, 1046
DpnI GATC 3 cut(s) 195, 390, 770
DpnII GATC 3 cut(s) 193, 388, 768
EaeI YGGCCR 1 cut(s) 293
EagI CGGCCG 1 cut(s) 293
EciI GGCGGA 1 cut(s) 122
EclXI CGGCCG 1 cut(s) 293
Eco130I CCWWGG 1 cut(s) 337
Eco24I GRGCYC 2 cut(s) 29, 838
Eco31I GGTCTC 1 cut(s) 61
Eco47I GGWCC 4 cut(s) 334, 557, 661, 935
Eco52I CGGCCG 1 cut(s) 293
Eco57I CTGAAG 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 620
EcoO109I RGGNCCY 1 cut(s) 935
EcoRII CCWGG 1 cut(s) 735
EcoT14I CCWWGG 1 cut(s) 337
EcoT38I GRGCYC 2 cut(s) 29, 838
ErhI CCWWGG 1 cut(s) 337
Esp3I CGTCTC 1 cut(s) 91
FaeI CATG 3 cut(s) 407, 593, 803
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 4 cut(s) 35, 437, 691, 948
FatI CATG 3 cut(s) 403, 589, 799
FauI CCCGC 2 cut(s) 50, 340
FauNDI CATATG 1 cut(s) 1004
Fnu4HI GCNGC 9 cut(s) 82, 92, 95, 105, 180, 627, 882, 981, 1063
FriOI GRGCYC 2 cut(s) 29, 838
Fsp4HI GCNGC 9 cut(s) 82, 92, 95, 105, 180, 627, 882, 981, 1063
FspBI CTAG 2 cut(s) 491, 1147
GlaI GCGC 1 cut(s) 784
GluI GCNGC 9 cut(s) 82, 92, 95, 105, 180, 627, 882, 981, 1063
GsaI CCCAGC 1 cut(s) 165
HaeII RGCGCY 1 cut(s) 786
HaeIII GGCC 3 cut(s) 171, 295, 1143
HapII CCGG 2 cut(s) 53, 324
HgaI GACGC 2 cut(s) 73, 691
HhaI GCGC 1 cut(s) 785
Hin1II CATG 3 cut(s) 407, 593, 803
Hin6I GCGC 1 cut(s) 783
HinP1I GCGC 1 cut(s) 783
HindIII AAGCTT 1 cut(s) 1136
HinfI GANTC 3 cut(s) 145, 805, 900
HpaII CCGG 2 cut(s) 53, 324
HphI GGTGA 2 cut(s) 67, 538
Hpy166II GTNNAC 4 cut(s) 118, 849, 1010, 1124
Hpy188I TCNGA 3 cut(s) 271, 450, 530
Hpy188III TCNNGA 7 cut(s) 191, 324, 404, 413, 667, 809, 904
Hpy8I GTNNAC 4 cut(s) 118, 849, 1010, 1124
Hpy99I CGWCG 2 cut(s) 251, 685
HpyAV CCTTC 4 cut(s) 40, 76, 292, 682
HpyCH4III ACNGT 2 cut(s) 361, 853
HpyCH4IV ACGT 3 cut(s) 228, 246, 964
HpyF10VI GCNNNNNNNGC 6 cut(s) 110, 162, 614, 623, 632, 890
HpyF3I CTNAG 5 cut(s) 261, 830, 837, 894, 1046
HpySE526I ACGT 3 cut(s) 228, 246, 964
Hsp92II CATG 3 cut(s) 407, 593, 803
HspAI GCGC 1 cut(s) 783
KflI GGGWCCC 1 cut(s) 935
Kpn2I TCCGGA 1 cut(s) 323
Kzo9I GATC 3 cut(s) 193, 388, 768
LmnI GCTCC 2 cut(s) 614, 634
Lsp1109I GCAGC 8 cut(s) 81, 93, 103, 166, 638, 893, 992, 1074
LweI GCATC 3 cut(s) 17, 397, 640
MaeI CTAG 2 cut(s) 491, 1147
MaeII ACGT 3 cut(s) 228, 246, 964
MaeIII GTNAC 2 cut(s) 726, 853
MalI GATC 3 cut(s) 195, 390, 770
MboI GATC 3 cut(s) 193, 388, 768
MboII GAAGA 3 cut(s) 25, 398, 1115
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 3 cut(s) 29, 619, 838
MluCI AATT 7 cut(s) 314, 444, 475, 563, 654, 975, 1074
MlyI GAGTC 1 cut(s) 909
MroI TCCGGA 1 cut(s) 323
MslI CAYNNNNRTG 1 cut(s) 1114
MspA1I CMGCKG 4 cut(s) 94, 214, 884, 1065
MspI CCGG 2 cut(s) 53, 324
MspR9I CCNGG 2 cut(s) 53, 737
MvaI CCWGG 1 cut(s) 737
MwoI GCNNNNNNNGC 6 cut(s) 110, 162, 614, 623, 632, 890
NciI CCSGG 1 cut(s) 53
NdeI CATATG 1 cut(s) 1004
NdeII GATC 3 cut(s) 193, 388, 768
NheI GCTAGC 1 cut(s) 490
NlaIII CATG 3 cut(s) 407, 593, 803
NlaIV GGNNCC 2 cut(s) 936, 937
NmeAIII GCCGAG 1 cut(s) 132
PaeR7I CTCGAG 1 cut(s) 620
PagI TCATGA 1 cut(s) 403
PaqCI CACCTGC 1 cut(s) 86
PfeI GAWTC 2 cut(s) 145, 805
PkrI GCNGC 9 cut(s) 83, 93, 96, 106, 181, 628, 883, 982, 1064
PleI GAGTC 1 cut(s) 908
PpsI GAGTC 1 cut(s) 908
PpuMI RGGWCCY 1 cut(s) 935
Psp5II RGGWCCY 1 cut(s) 935
Psp6I CCWGG 1 cut(s) 735
PspFI CCCAGC 1 cut(s) 161
PspGI CCWGG 1 cut(s) 735
PspN4I GGNNCC 2 cut(s) 936, 937
PspPI GGNCC 4 cut(s) 334, 557, 661, 935
PspPPI RGGWCCY 1 cut(s) 935
PspXI VCTCGAGB 1 cut(s) 620
PstI CTGCAG 1 cut(s) 83
PstNI CAGNNNCTG 1 cut(s) 632
PsuI RGATCY 1 cut(s) 388
PvuII CAGCTG 2 cut(s) 94, 214
RsaI GTAC 1 cut(s) 1011
RsaNI GTAC 1 cut(s) 1010
RseI CAYNNNNRTG 1 cut(s) 1114
SatI GCNGC 9 cut(s) 82, 92, 95, 105, 180, 627, 882, 981, 1063
Sau3AI GATC 3 cut(s) 193, 388, 768
Sau96I GGNCC 4 cut(s) 334, 557, 661, 935
SchI GAGTC 1 cut(s) 909
ScrFI CCNGG 2 cut(s) 53, 737
SduI GDGCHC 3 cut(s) 29, 619, 838
SfaNI GCATC 3 cut(s) 17, 397, 640
SfcI CTRYAG 1 cut(s) 79
Sfr274I CTCGAG 1 cut(s) 620
SinI GGWCC 4 cut(s) 334, 557, 661, 935
SlaI CTCGAG 1 cut(s) 620
SmiMI CAYNNNNRTG 1 cut(s) 1114
SmlI CTYRAG 3 cut(s) 200, 620, 904
SmoI CTYRAG 3 cut(s) 200, 620, 904
Sse9I AATT 7 cut(s) 314, 444, 475, 563, 654, 975, 1074
SsiI CCGC 7 cut(s) 43, 104, 107, 310, 347, 884, 1065
SspMI CTAG 2 cut(s) 491, 1147
StyD4I CCNGG 2 cut(s) 51, 735
StyI CCWWGG 1 cut(s) 337
TaaI ACNGT 2 cut(s) 361, 853
TaiI ACGT 3 cut(s) 231, 249, 967
TaqI TCGA 1 cut(s) 621
TasI AATT 7 cut(s) 314, 444, 475, 563, 654, 975, 1074
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 2 cut(s) 145, 805
TscAI CASTG 3 cut(s) 120, 370, 486
TseI GCWGC 8 cut(s) 81, 91, 94, 179, 626, 881, 980, 1062
TspDTI ATGAA 4 cut(s) 392, 399, 584, 1116
TspGWI ACGGA 4 cut(s) 151, 208, 387, 1024
TspRI CASTG 3 cut(s) 120, 370, 486
VpaK11BI GGWCC 4 cut(s) 334, 557, 661, 935
XapI RAATTY 2 cut(s) 475, 563
XhoI CTCGAG 1 cut(s) 620
XspI CTAG 2 cut(s) 491, 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.