Rh1DG051100

ATP phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
8232934 .. 8237773
4840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG051100.1

Sequence Viewer

Length: 1080 bp
ATGTTGGCGGCAAACCCACCCAAATGCCCCTTCTTCCTCACTCACTCCCTCCCCCTCTCCTCCTCTCCCTCGCCGTCCTTCAAAATCACCTGCTCTGCCGCGGCGGCGGAGGAGAGGAGCGAGATTCGGCTGGGACTGCCCAGCAAAGGCCGCATGGCCGCCGACACTCTCGATCTCCTCAAGGACTGCCAATTGTCCGTCAAACACGTCAATCCTCGCCAGTACGTTGCTAAAATCCCTGAGCTGTCTAATTTGGAAGTGTGGTTTCAAAGGCCTAAGGACATTGTGAGGAAGCTGCTGTCTGGGGATTTGGACCTTGGCATTGCCGGTCTTGACACCGTCAGTGAATATGGACAGGGGAGTGAAGATCTTATCATTGTTCATGATGCTCTTGGTTTTGGGGAGTGCCACTTATCCCTTGCAATACCAAAATATGGGATTTTTGAGAACATTAATTCACTGAATGAGCTAGCACAAATGCCTCAATGGACTAGAGAGAAACCTCTGCGAGTTGCTACTGGCTTCACCTATTTGGGTCCCAAATTTGTGAAAGAAAATGGACTGGACCATGTGAGTTTTTCCACAGCTGATGGAGCACTTGAGGCAGCTCCTGCGATGGGGATAGCTGATGCAATTTTGGACCTTGTGAGTAGTGGGATAACACTGAAAGAAAACAATCTGAAAGAGATCGAGGGAGGAGTTGTGTTGCGAAGTCAAGCAGTTCTTGTTGCAAGCAAGAGATCCTTGCTCAAAATGAAAAGTGCACTTGAAACTACACATGAGATTCTGGAAAGATTGGAGGCGCATCTAAAGGCAGAGGGTCAGTATACGGTGGTTGCAAATGTGAGGGGAAATAGTGCACAAGAAGTGGCTGAGCGAGTCCTTAGCCAGCCATCATTAGCTGGTTTGCAGGGACCCACTGTAAGTACAGTGTATTGCAAACGTGATGGGCAAATAAAGGCAGATTACTATGCCATTGTCATATGTGTGCCAAAAAAGGCCCTCTACAAGTCTGTACAACAATTGAGAGCGGTGAGCCATGATCTTTCATTTAGTAATTTTCAATGTTATAGAAGCTGA

Protein Analysis

359

Amino Acids

39.14

Weight (kDa)

7.08

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisG PF01634 91 - 267 4.1e-37 ATP phosphoribosyltransferase
HisG_C PF08029 272 - 345 3.2e-07 HisG, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 98
Acc36I ACCTGC 1 cut(s) 98
AccB7I CCANNNNNTGG 1 cut(s) 434
AccBSI CCGCTC 1 cut(s) 1031
AccI GTMKAC 1 cut(s) 827
AccII CGCG 1 cut(s) 101
AciI CCGC 8 cut(s) 8, 99, 101, 104, 107, 151, 159, 1031
AclWI GGATC 1 cut(s) 735
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 1 cut(s) 542
AfaI GTAC 3 cut(s) 224, 928, 1017
AfiI CCNNNNNNNGG 3 cut(s) 146, 434, 617
AflIII ACRYGT 1 cut(s) 205
AgsI TTSAA 4 cut(s) 82, 269, 770, 1064
AjiI CACGTC 1 cut(s) 208
AjuI GAANNNNNNNTTGG 2 cut(s) 14, 46
AluBI AGCT 8 cut(s) 244, 295, 469, 587, 608, 626, 902, 1077
AluI AGCT 8 cut(s) 244, 295, 469, 587, 608, 626, 902, 1077
Alw21I GWGCWC 3 cut(s) 598, 766, 862
Alw44I GTGCAC 2 cut(s) 762, 858
AlwI GGATC 1 cut(s) 735
AlwNI CAGNNNCTG 1 cut(s) 611
AoxI GGCC 4 cut(s) 148, 156, 272, 999
ApaLI GTGCAC 2 cut(s) 762, 858
ApeKI GCWGC 2 cut(s) 295, 605
ApoI RAATTY 1 cut(s) 542
AseI ATTAAT 1 cut(s) 453
AspLEI GCGC 1 cut(s) 805
AspS9I GGNCC 6 cut(s) 313, 536, 565, 640, 914, 1000
AsuHPI GGTGA 3 cut(s) 79, 517, 1045
AsuNHI GCTAGC 1 cut(s) 469
AvaII GGWCC 5 cut(s) 313, 536, 565, 640, 914
AxyI CCTNAGG 1 cut(s) 276
BaeGI GKGCMC 2 cut(s) 766, 862
Bbv12I GWGCWC 3 cut(s) 598, 766, 862
BbvI GCAGC 2 cut(s) 282, 617
BccI CCATC 4 cut(s) 584, 610, 901, 941
BceAI ACGGC 1 cut(s) 58
BfaI CTAG 2 cut(s) 470, 492
BfuAI ACCTGC 1 cut(s) 98
BglI GCCNNNNNGGC 1 cut(s) 104
BglII AGATCT 1 cut(s) 367
BisI GCNGC 8 cut(s) 9, 99, 102, 105, 151, 159, 296, 606
BlpI GCTNAGC 1 cut(s) 873
BlsI GCNGC 8 cut(s) 10, 100, 103, 106, 152, 160, 297, 607
Bme18I GGWCC 5 cut(s) 313, 536, 565, 640, 914
BmgBI CACGTC 1 cut(s) 208
BmgT120I GGNCC 6 cut(s) 313, 536, 565, 640, 914, 1000
BmiI GGNNCC 4 cut(s) 537, 538, 915, 916
BmsI GCATC 3 cut(s) 376, 619, 814
BmtI GCTAGC 1 cut(s) 473
Bpu10I CCTNAGC 2 cut(s) 240, 884
Bpu1102I GCTNAGC 1 cut(s) 873
BpuEI CTTGAG 2 cut(s) 164, 620
BsaJI CCNNGG 2 cut(s) 99, 316
BsaXI ACNNNNNCTCC 2 cut(s) 687, 717
Bsc4I CCNNNNNNNGG 3 cut(s) 146, 434, 617
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 3 cut(s) 220, 523, 567
Bse21I CCTNAGG 1 cut(s) 276
Bse3DI GCAATG 1 cut(s) 321
BseDI CCNNGG 2 cut(s) 99, 316
BseLI CCNNNNNNNGG 3 cut(s) 146, 434, 617
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 2 cut(s) 231, 864
BseNI ACTGG 3 cut(s) 220, 523, 567
BseRI GAGGAG 6 cut(s) 49, 52, 125, 130, 167, 711
BseSI GKGCMC 2 cut(s) 766, 862
BseXI GCAGC 2 cut(s) 282, 617
BseYI CCCAGC 2 cut(s) 130, 140
Bsh1236I CGCG 1 cut(s) 101
BshFI GGCC 4 cut(s) 150, 158, 274, 1001
BsiHKAI GWGCWC 3 cut(s) 598, 766, 862
BsiSI CCGG 1 cut(s) 327
BslFI GGGAC 3 cut(s) 147, 522, 927
BslI CCNNNNNNNGG 3 cut(s) 146, 434, 617
BsmFI GGGAC 3 cut(s) 147, 522, 927
BsnI GGCC 4 cut(s) 150, 158, 274, 1001
Bsp1286I GDGCHC 3 cut(s) 598, 766, 862
Bsp1407I TGTACA 1 cut(s) 1015
Bsp143I GATC 5 cut(s) 172, 367, 687, 740, 1042
Bsp1720I GCTNAGC 1 cut(s) 873
BspACI CCGC 8 cut(s) 8, 99, 101, 104, 107, 151, 159, 1031
BspANI GGCC 4 cut(s) 150, 158, 274, 1001
BspCNI CTCAG 2 cut(s) 232, 865
BspFNI CGCG 1 cut(s) 101
BspHI TCATGA 1 cut(s) 382
BspLI GGNNCC 4 cut(s) 537, 538, 915, 916
BspMI ACCTGC 1 cut(s) 98
BspOI GCTAGC 1 cut(s) 473
BspPI GGATC 1 cut(s) 735
BsrBI CCGCTC 1 cut(s) 1031
BsrDI GCAATG 1 cut(s) 321
BsrFI RCCGGY 1 cut(s) 326
BsrGI TGTACA 1 cut(s) 1015
BsrI ACTGG 3 cut(s) 220, 523, 567
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 2 cut(s) 99, 316
BssMI GATC 5 cut(s) 172, 367, 687, 740, 1042
BssNAI GTATAC 1 cut(s) 828
BssT1I CCWWGG 1 cut(s) 316
Bst1107I GTATAC 1 cut(s) 828
Bst4CI ACNGT 4 cut(s) 340, 832, 922, 931
BstAPI GCANNNNNTGC 1 cut(s) 611
BstAUI TGTACA 1 cut(s) 1015
BstC8I GCNNGC 3 cut(s) 471, 733, 890
BstDEI CTNAG 4 cut(s) 240, 276, 873, 884
BstDSI CCRYGG 1 cut(s) 99
BstFNI CGCG 1 cut(s) 101
BstHHI GCGC 1 cut(s) 805
BstKTI GATC 5 cut(s) 175, 370, 690, 743, 1045
BstMBI GATC 5 cut(s) 172, 367, 687, 740, 1042
BstMWI GCNNNNNNNGC 6 cut(s) 104, 136, 150, 593, 602, 611
BstSLI GKGCMC 2 cut(s) 766, 862
BstUI CGCG 1 cut(s) 101
BstV1I GCAGC 2 cut(s) 282, 617
BstX2I RGATCY 2 cut(s) 367, 740
BstYI RGATCY 2 cut(s) 367, 740
BstZ17I GTATAC 1 cut(s) 828
Bsu36I CCTNAGG 1 cut(s) 276
BsuRI GGCC 4 cut(s) 150, 158, 274, 1001
BtgI CCRYGG 1 cut(s) 99
BtgZI GCGATG 1 cut(s) 629
BtrI CACGTC 1 cut(s) 208
BtsIMutI CAGTG 5 cut(s) 349, 458, 662, 918, 936
BveI ACCTGC 1 cut(s) 98
Cac8I GCNNGC 3 cut(s) 471, 733, 890
CaiI CAGNNNCTG 1 cut(s) 611
CciI TCATGA 1 cut(s) 382
CfoI GCGC 1 cut(s) 805
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 6 cut(s) 313, 536, 565, 640, 914, 1000
Cfr42I CCGCGG 1 cut(s) 102
Csp6I GTAC 3 cut(s) 223, 927, 1016
CviAII CATG 5 cut(s) 154, 383, 569, 779, 1040
CviQI GTAC 3 cut(s) 223, 927, 1016
DdeI CTNAG 4 cut(s) 240, 276, 873, 884
DpnI GATC 5 cut(s) 174, 369, 689, 742, 1044
DpnII GATC 5 cut(s) 172, 367, 687, 740, 1042
EaeI YGGCCR 1 cut(s) 156
EciI GGCGGA 1 cut(s) 122
Eco130I CCWWGG 1 cut(s) 316
Eco147I AGGCCT 1 cut(s) 274
Eco47I GGWCC 5 cut(s) 313, 536, 565, 640, 914
Eco81I CCTNAGG 1 cut(s) 276
EcoO109I RGGNCCY 3 cut(s) 536, 914, 1000
EcoT14I CCWWGG 1 cut(s) 316
ErhI CCWWGG 1 cut(s) 316
FaeI CATG 5 cut(s) 157, 386, 572, 782, 1043
FalI AAGNNNNNCTT 4 cut(s) 708, 740, 728, 760
FaqI GGGAC 3 cut(s) 147, 522, 927
FatI CATG 5 cut(s) 153, 382, 568, 778, 1039
FauNDI CATATG 1 cut(s) 983
FblI GTMKAC 1 cut(s) 827
Fnu4HI GCNGC 8 cut(s) 9, 99, 102, 105, 151, 159, 296, 606
Fsp4HI GCNGC 8 cut(s) 9, 99, 102, 105, 151, 159, 296, 606
FspBI CTAG 2 cut(s) 470, 492
GlaI GCGC 1 cut(s) 804
GluI GCNGC 8 cut(s) 9, 99, 102, 105, 151, 159, 296, 606
GsaI CCCAGC 2 cut(s) 134, 144
HaeIII GGCC 4 cut(s) 150, 158, 274, 1001
HapII CCGG 1 cut(s) 327
HhaI GCGC 1 cut(s) 805
Hin1II CATG 5 cut(s) 157, 386, 572, 782, 1043
Hin6I GCGC 1 cut(s) 803
HinP1I GCGC 1 cut(s) 803
HinfI GANTC 3 cut(s) 124, 784, 879
HpaII CCGG 1 cut(s) 327
HphI GGTGA 3 cut(s) 79, 517, 1045
Hpy166II GTNNAC 3 cut(s) 764, 828, 860
Hpy188I TCNGA 1 cut(s) 681
Hpy188III TCNNGA 4 cut(s) 170, 332, 383, 788
Hpy8I GTNNAC 3 cut(s) 764, 828, 860
HpyAV CCTTC 2 cut(s) 40, 88
HpyCH4III ACNGT 4 cut(s) 340, 832, 922, 931
HpyCH4IV ACGT 3 cut(s) 207, 225, 943
HpyCH4V TGCA 8 cut(s) 422, 632, 731, 764, 839, 860, 910, 939
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 136, 150, 593, 602, 611
HpyF3I CTNAG 4 cut(s) 240, 276, 873, 884
HpySE526I ACGT 3 cut(s) 207, 225, 943
Hsp92II CATG 5 cut(s) 157, 386, 572, 782, 1043
HspAI GCGC 1 cut(s) 803
KflI GGGWCCC 2 cut(s) 536, 914
KspI CCGCGG 1 cut(s) 102
Kzo9I GATC 5 cut(s) 172, 367, 687, 740, 1042
LmnI GCTCC 3 cut(s) 117, 593, 613
Lsp1109I GCAGC 2 cut(s) 282, 617
LweI GCATC 3 cut(s) 376, 619, 814
MaeI CTAG 2 cut(s) 470, 492
MaeII ACGT 3 cut(s) 207, 225, 943
MalI GATC 5 cut(s) 174, 369, 689, 742, 1044
MbiI CCGCTC 1 cut(s) 1031
MboI GATC 5 cut(s) 172, 367, 687, 740, 1042
MboII GAAGA 2 cut(s) 25, 377
MfeI CAATTG 2 cut(s) 191, 1022
MflI RGATCY 2 cut(s) 367, 740
MhlI GDGCHC 3 cut(s) 598, 766, 862
MluCI AATT 7 cut(s) 191, 250, 454, 542, 633, 1022, 1057
MlyI GAGTC 1 cut(s) 888
MseI TTAA 1 cut(s) 453
MslI CAYNNNNRTG 2 cut(s) 22, 986
MspA1I CMGCKG 2 cut(s) 101, 587
MspI CCGG 1 cut(s) 327
MunI CAATTG 2 cut(s) 191, 1022
MvnI CGCG 1 cut(s) 101
MwoI GCNNNNNNNGC 6 cut(s) 104, 136, 150, 593, 602, 611
NdeI CATATG 1 cut(s) 983
NdeII GATC 5 cut(s) 172, 367, 687, 740, 1042
NheI GCTAGC 1 cut(s) 469
NlaIII CATG 5 cut(s) 157, 386, 572, 782, 1043
NlaIV GGNNCC 4 cut(s) 537, 538, 915, 916
PagI TCATGA 1 cut(s) 382
PaqCI CACCTGC 1 cut(s) 98
PceI AGGCCT 1 cut(s) 274
PfeI GAWTC 2 cut(s) 124, 784
PflFI GACNNNGTC 1 cut(s) 338
PflMI CCANNNNNTGG 1 cut(s) 434
PkrI GCNGC 8 cut(s) 10, 100, 103, 106, 152, 160, 297, 607
PleI GAGTC 1 cut(s) 887
PpsI GAGTC 1 cut(s) 887
PpuMI RGGWCCY 2 cut(s) 536, 914
PshBI ATTAAT 1 cut(s) 453
Psp5II RGGWCCY 2 cut(s) 536, 914
PspFI CCCAGC 2 cut(s) 130, 140
PspN4I GGNNCC 4 cut(s) 537, 538, 915, 916
PspPI GGNCC 6 cut(s) 313, 536, 565, 640, 914, 1000
PspPPI RGGWCCY 2 cut(s) 536, 914
PstNI CAGNNNCTG 1 cut(s) 611
PsuI RGATCY 2 cut(s) 367, 740
PsyI GACNNNGTC 1 cut(s) 338
PvuII CAGCTG 1 cut(s) 587
RsaI GTAC 3 cut(s) 224, 928, 1017
RsaNI GTAC 3 cut(s) 223, 927, 1016
RseI CAYNNNNRTG 2 cut(s) 22, 986
SacII CCGCGG 1 cut(s) 102
SaqAI TTAA 1 cut(s) 453
SatI GCNGC 8 cut(s) 9, 99, 102, 105, 151, 159, 296, 606
Sau3AI GATC 5 cut(s) 172, 367, 687, 740, 1042
Sau96I GGNCC 6 cut(s) 313, 536, 565, 640, 914, 1000
SchI GAGTC 1 cut(s) 888
SduI GDGCHC 3 cut(s) 598, 766, 862
SfaNI GCATC 3 cut(s) 376, 619, 814
Sfr303I CCGCGG 1 cut(s) 102
SgrBI CCGCGG 1 cut(s) 102
SinI GGWCC 5 cut(s) 313, 536, 565, 640, 914
SmiMI CAYNNNNRTG 2 cut(s) 22, 986
SmlI CTYRAG 2 cut(s) 179, 599
SmoI CTYRAG 2 cut(s) 179, 599
Sse9I AATT 7 cut(s) 191, 250, 454, 542, 633, 1022, 1057
SseBI AGGCCT 1 cut(s) 274
SsiI CCGC 8 cut(s) 8, 99, 101, 104, 107, 151, 159, 1031
SspMI CTAG 2 cut(s) 470, 492
StuI AGGCCT 1 cut(s) 274
StyI CCWWGG 1 cut(s) 316
TaaI ACNGT 4 cut(s) 340, 832, 922, 931
TaiI ACGT 3 cut(s) 210, 228, 946
TaqI TCGA 2 cut(s) 171, 690
TasI AATT 7 cut(s) 191, 250, 454, 542, 633, 1022, 1057
TatI WGTACW 2 cut(s) 926, 1015
TauI GCSGC 6 cut(s) 11, 101, 104, 107, 153, 161
TfiI GAWTC 2 cut(s) 124, 784
Tru1I TTAA 1 cut(s) 453
Tru9I TTAA 1 cut(s) 453
TscAI CASTG 5 cut(s) 349, 465, 669, 925, 936
TseI GCWGC 2 cut(s) 295, 605
TspDTI ATGAA 3 cut(s) 371, 770, 1038
TspGWI ACGGA 1 cut(s) 187
TspRI CASTG 5 cut(s) 349, 465, 669, 925, 936
Tth111I GACNNNGTC 1 cut(s) 338
Van91I CCANNNNNTGG 1 cut(s) 434
VneI GTGCAC 2 cut(s) 762, 858
VpaK11BI GGWCC 5 cut(s) 313, 536, 565, 640, 914
VspI ATTAAT 1 cut(s) 453
XapI RAATTY 1 cut(s) 542
XmiI GTMKAC 1 cut(s) 827
XspI CTAG 2 cut(s) 470, 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.