AT1G58080

ATP phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
21504314 .. 21507679
3366 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G58080.1

Sequence Viewer

Length: 1236 bp
ATGTCTCTCCTTCTCCCTACGAATTTACAACAATACCCTTCTTCTTCCTCCTTCCCATCTTCAACACCTATCCTATCTCCGCCTCCTTCCACCGCTTTCTCCGTCATCGTACCTCGTCGGAGATGTCTCAGATTGGTTACTTCTTGTGTCTCCACCGTTCAAAGCTCCGTCGCAACAAACGGTTCCTCTCCAGCTCCTGCTCCGGCCGCTGTTGTCGTTGAGCGTGACCAGATTCGTCTTGGTCTTCCTAGTAAAGGACGTATGGCTGCTGATGCAATCGATCTTCTCAAGGACTGTCAACTGTTTGTTAAACAAGTCAATCCTAGGCAATATGTTGCACAGATTCCCCAGTTACCAAACACTGAAGTCTGGTTTCAACGGCCAAAAGATATTGTCAGAAAGTTACTCTCAGGAGATTTGGATCTAGGTATCGTTGGTCTTGACACACTTAGTGAATATGGTCAGGAAAATGAAGATCTTATCATTGTCCATGAAGCTCTCAACTTTGGAGACTGTCACCTGTCTATTGCGATTCCAAACTATGGGATATTTGAGAATATAAATTCTCTGAAGGAGCTAGCGCAAATGCCCCAATGGAGTGAAGAGAGACCCTTACGCTTAGCTACTGGCTTCACTTATCTCGGCCCCAAATTTATGAAAGAAAATGGCATAAAGCATGTGGTGTTTTCAACTGCAGACGGAGCACTGGAGGCAGCTCCAGCGATGGGGATAGCTGATGCCATTTTGGATCTTGTGAGTAGTGGTATAACACTCAAAGAGAACAACTTGAAAGAAATTGAAGGAGGTGTTGTGCTGGAAAGCCAGGCGGCACTTGTGGCAAGTAGAAGAGCATTAAACGAGAGAAAAGGGGCACTAAACACAGTACACGAGATTCTTGAGAGATTGGAGGCCCATCTAAAGGCGGATGGCCAATTCACTGTTGTTGCAAACATGAGAGGAAATAGTGCTCAGGAAGTGGCTGAGCGTGTGCTGAGCCAACCATCATTGTCAGGATTGCAGGGACCGACAATAAGCCCAGTGTACTGTACACAAAATGGAAAAGTATCGGTTGACTACTATGCCATCGTGATTTGTGTACCAAAAAAGGCCCTATACGACTCTGTGAAGCAACTTAGAGCGGCCGGAGGCAGTGGGGTATTAGTTTCACCTTTGACCTACATTTTTGATGAGGATACTCCAAGATGGGGTCAGCTCCTGAGAAACCTCGGGATTTAA

Protein Analysis

411

Amino Acids

44.56

Weight (kDa)

6.04

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisG PF01634 127 - 303 4.8e-37 ATP phosphoribosyltransferase
HisG_C PF08029 308 - 392 2.9e-12 HisG, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 542
AccBSI CCGCTC 1 cut(s) 1139
AciI CCGC 6 cut(s) 80, 93, 207, 827, 923, 1139
AclWI GGATC 2 cut(s) 429, 756
AcoI YGGCCR 4 cut(s) 204, 380, 928, 1140
AcsI RAATTY 3 cut(s) 22, 562, 650
AcuI CTGAAG 2 cut(s) 384, 590
AdeI CACNNNGTG 1 cut(s) 452
AfaI GTAC 5 cut(s) 111, 885, 1043, 1048, 1098
AfiI CCNNNNNNNGG 5 cut(s) 254, 542, 725, 919, 1205
AgsI TTSAA 6 cut(s) 63, 161, 377, 690, 790, 800
AjnI CCWGG 1 cut(s) 822
AluBI AGCT 8 cut(s) 165, 194, 497, 577, 623, 716, 734, 1213
AluI AGCT 8 cut(s) 165, 194, 497, 577, 623, 716, 734, 1213
Alw21I GWGCWC 2 cut(s) 706, 970
Alw26I GTCTC 5 cut(s) 9, 131, 154, 504, 601
AlwI GGATC 2 cut(s) 429, 756
AlwNI CAGNNNCTG 2 cut(s) 197, 1216
Ama87I CYCGRG 1 cut(s) 1226
AoxI GGCC 7 cut(s) 204, 380, 643, 909, 928, 1107, 1140
ApeKI GCWGC 2 cut(s) 266, 713
ApoI RAATTY 3 cut(s) 22, 562, 650
AspA2I CCTAGG 1 cut(s) 323
AspLEI GCGC 1 cut(s) 583
AspS9I GGNCC 4 cut(s) 644, 910, 1022, 1108
AsuHPI GGTGA 2 cut(s) 509, 1158
AsuNHI GCTAGC 1 cut(s) 577
AvaI CYCGRG 1 cut(s) 1226
AvaII GGWCC 1 cut(s) 1022
AvrII CCTAGG 1 cut(s) 323
BaeGI GKGCMC 1 cut(s) 874
BalI TGGCCA 1 cut(s) 930
BauI CACGAG 1 cut(s) 887
BbsI GAAGAC 1 cut(s) 236
Bbv12I GWGCWC 2 cut(s) 706, 970
BbvI GCAGC 2 cut(s) 253, 725
BccI CCATC 7 cut(s) 64, 718, 920, 921, 1009, 1091, 1197
BceAI ACGGC 1 cut(s) 395
BciT130I CCWGG 1 cut(s) 824
BciVI GTATCC 1 cut(s) 1186
BcoDI GTCTC 5 cut(s) 9, 131, 154, 504, 601
BfaI CTAG 4 cut(s) 249, 324, 425, 578
BfmI CTRYAG 1 cut(s) 693
BfuI GTATCC 1 cut(s) 1186
BglII AGATCT 1 cut(s) 475
BisI GCNGC 5 cut(s) 207, 267, 714, 828, 1140
BlnI CCTAGG 1 cut(s) 323
BlpI GCTNAGC 3 cut(s) 619, 981, 992
BlsI GCNGC 5 cut(s) 208, 268, 715, 829, 1141
Bme1390I CCNGG 1 cut(s) 824
Bme18I GGWCC 1 cut(s) 1022
BmeT110I CYCGRG 1 cut(s) 1226
BmgT120I GGNCC 4 cut(s) 644, 910, 1022, 1108
BmiI GGNNCC 3 cut(s) 184, 646, 1023
BmrFI CCNGG 1 cut(s) 824
BmrI ACTGGG 2 cut(s) 343, 1031
BmsI GCATC 2 cut(s) 262, 727
BmtI GCTAGC 1 cut(s) 581
BmuI ACTGGG 2 cut(s) 343, 1031
BpiI GAAGAC 1 cut(s) 236
BpmI CTGGAG 3 cut(s) 174, 702, 728
Bpu10I CCTNAGC 1 cut(s) 969
Bpu1102I GCTNAGC 3 cut(s) 619, 981, 992
BpuEI CTTGAG 2 cut(s) 272, 917
Bsa29I ATCGAT 1 cut(s) 279
BsaBI GATNNNNATC 1 cut(s) 420
BsaI GGTCTC 1 cut(s) 601
BsaJI CCNNGG 2 cut(s) 323, 1225
BsaXI ACNNNNNCTCC 2 cut(s) 795, 825
Bsc4I CCNNNNNNNGG 5 cut(s) 254, 542, 725, 919, 1205
Bse1I ACTGG 4 cut(s) 349, 631, 711, 1037
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 1 cut(s) 824
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 2 cut(s) 323, 1225
BseGI GGATG 1 cut(s) 931
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 5 cut(s) 254, 542, 725, 919, 1205
BseMII CTCAG 6 cut(s) 142, 423, 972, 983, 983, 1208
BseNI ACTGG 4 cut(s) 349, 631, 711, 1037
BseSI GKGCMC 1 cut(s) 874
BseX3I CGGCCG 2 cut(s) 204, 1140
BseXI GCAGC 2 cut(s) 253, 725
Bsh1285I CGRYCG 2 cut(s) 207, 1143
BshFI GGCC 7 cut(s) 206, 382, 645, 911, 930, 1109, 1142
BshVI ATCGAT 1 cut(s) 279
BsiEI CGRYCG 2 cut(s) 207, 1143
BsiHKAI GWGCWC 2 cut(s) 706, 970
BsiHKCI CYCGRG 1 cut(s) 1226
BsiSI CCGG 2 cut(s) 203, 1143
BslFI GGGAC 1 cut(s) 1035
BslI CCNNNNNNNGG 5 cut(s) 254, 542, 725, 919, 1205
BsmAI GTCTC 5 cut(s) 9, 131, 154, 504, 601
BsmFI GGGAC 1 cut(s) 1035
BsnI GGCC 7 cut(s) 206, 382, 645, 911, 930, 1109, 1142
Bso31I GGTCTC 1 cut(s) 601
BsoBI CYCGRG 1 cut(s) 1226
Bsp1286I GDGCHC 3 cut(s) 706, 874, 970
Bsp1407I TGTACA 1 cut(s) 1046
Bsp143I GATC 4 cut(s) 280, 421, 475, 748
Bsp1720I GCTNAGC 3 cut(s) 619, 981, 992
BspACI CCGC 6 cut(s) 80, 93, 207, 827, 923, 1139
BspANI GGCC 7 cut(s) 206, 382, 645, 911, 930, 1109, 1142
BspCNI CTCAG 6 cut(s) 141, 422, 973, 982, 984, 1209
BspDI ATCGAT 1 cut(s) 279
BspLI GGNNCC 3 cut(s) 184, 646, 1023
BspMAI CTGCAG 1 cut(s) 697
BspOI GCTAGC 1 cut(s) 581
BspPI GGATC 2 cut(s) 429, 756
BspQI GCTCTTC 1 cut(s) 841
BspTNI GGTCTC 1 cut(s) 601
BsrBI CCGCTC 1 cut(s) 1139
BsrGI TGTACA 1 cut(s) 1046
BsrI ACTGG 4 cut(s) 349, 631, 711, 1037
BssECI CCNNGG 2 cut(s) 323, 1225
BssMI GATC 4 cut(s) 280, 421, 475, 748
BssSI CACGAG 1 cut(s) 887
BssT1I CCWWGG 1 cut(s) 323
Bst2BI CACGAG 1 cut(s) 887
Bst2UI CCWGG 1 cut(s) 824
Bst4CI ACNGT 8 cut(s) 157, 182, 296, 303, 515, 883, 940, 1046
Bst6I CTCTTC 2 cut(s) 597, 841
BstAUI TGTACA 1 cut(s) 1046
BstC8I GCNNGC 1 cut(s) 579
BstDEI CTNAG 9 cut(s) 128, 409, 449, 619, 969, 981, 992, 1133, 1217
BstENI CCTNNNNNAGG 1 cut(s) 252
BstF5I GGATG 1 cut(s) 931
BstHHI GCGC 1 cut(s) 583
BstKTI GATC 4 cut(s) 283, 424, 478, 751
BstMAI GTCTC 5 cut(s) 9, 131, 154, 504, 601
BstMBI GATC 4 cut(s) 280, 421, 475, 748
BstMCI CGRYCG 2 cut(s) 207, 1143
BstMWI GCNNNNNNNGC 6 cut(s) 206, 272, 701, 710, 719, 836
BstNI CCWGG 1 cut(s) 824
BstNSI RCATGY 1 cut(s) 680
BstSCI CCNGG 1 cut(s) 822
BstSFI CTRYAG 1 cut(s) 693
BstSLI GKGCMC 1 cut(s) 874
BstV1I GCAGC 2 cut(s) 253, 725
BstV2I GAAGAC 1 cut(s) 236
BstX2I RGATCY 3 cut(s) 421, 475, 748
BstYI RGATCY 3 cut(s) 421, 475, 748
BstZI CGGCCG 2 cut(s) 204, 1140
Bsu15I ATCGAT 1 cut(s) 279
BsuI GTATCC 1 cut(s) 1186
BsuRI GGCC 7 cut(s) 206, 382, 645, 911, 930, 1109, 1142
BsuTUI ATCGAT 1 cut(s) 279
BtgZI GCGATG 1 cut(s) 737
BtsCI GGATG 1 cut(s) 931
BtsI GCAGTG 1 cut(s) 1156
BtsIMutI CAGTG 5 cut(s) 360, 704, 936, 1044, 1156
Cac8I GCNNGC 1 cut(s) 579
CaiI CAGNNNCTG 2 cut(s) 197, 1216
CfoI GCGC 1 cut(s) 583
Cfr13I GGNCC 4 cut(s) 644, 910, 1022, 1108
ClaI ATCGAT 1 cut(s) 279
Csp6I GTAC 5 cut(s) 110, 884, 1042, 1047, 1097
CviAII CATG 3 cut(s) 491, 677, 952
CviQI GTAC 5 cut(s) 110, 884, 1042, 1047, 1097
DdeI CTNAG 9 cut(s) 128, 409, 449, 619, 969, 981, 992, 1133, 1217
DpnI GATC 4 cut(s) 282, 423, 477, 750
DpnII GATC 4 cut(s) 280, 421, 475, 748
DraIII CACNNNGTG 1 cut(s) 452
EaeI YGGCCR 4 cut(s) 204, 380, 928, 1140
EagI CGGCCG 2 cut(s) 204, 1140
Eam1104I CTCTTC 2 cut(s) 597, 841
EarI CTCTTC 2 cut(s) 597, 841
EciI GGCGGA 2 cut(s) 69, 938
EclXI CGGCCG 2 cut(s) 204, 1140
Eco130I CCWWGG 1 cut(s) 323
Eco31I GGTCTC 1 cut(s) 601
Eco47I GGWCC 1 cut(s) 1022
Eco52I CGGCCG 2 cut(s) 204, 1140
Eco57I CTGAAG 2 cut(s) 384, 590
Eco88I CYCGRG 1 cut(s) 1226
EcoNI CCTNNNNNAGG 1 cut(s) 252
EcoO109I RGGNCCY 1 cut(s) 1108
EcoRII CCWGG 1 cut(s) 822
EcoT14I CCWWGG 1 cut(s) 323
ErhI CCWWGG 1 cut(s) 323
FaeI CATG 3 cut(s) 494, 680, 955
FaqI GGGAC 1 cut(s) 1035
FatI CATG 3 cut(s) 490, 676, 951
Fnu4HI GCNGC 5 cut(s) 207, 267, 714, 828, 1140
FokI GGATG 1 cut(s) 938
Fsp4HI GCNGC 5 cut(s) 207, 267, 714, 828, 1140
FspBI CTAG 4 cut(s) 249, 324, 425, 578
GlaI GCGC 1 cut(s) 582
GluI GCNGC 5 cut(s) 207, 267, 714, 828, 1140
GsuI CTGGAG 3 cut(s) 174, 702, 728
HaeIII GGCC 7 cut(s) 206, 382, 645, 911, 930, 1109, 1142
HapII CCGG 2 cut(s) 203, 1143
HhaI GCGC 1 cut(s) 583
Hin1II CATG 3 cut(s) 494, 680, 955
Hin6I GCGC 1 cut(s) 581
HinP1I GCGC 1 cut(s) 581
HincII GTYRAC 2 cut(s) 299, 1072
HindII GTYRAC 2 cut(s) 299, 1072
HinfI GANTC 5 cut(s) 232, 343, 532, 892, 1118
HpaII CCGG 2 cut(s) 203, 1143
HphI GGTGA 2 cut(s) 509, 1158
Hpy166II GTNNAC 6 cut(s) 299, 886, 1042, 1049, 1072, 1097
Hpy188I TCNGA 4 cut(s) 120, 131, 398, 570
Hpy188III TCNNGA 9 cut(s) 411, 440, 464, 896, 971, 1011, 1087, 1216, 1228
Hpy8I GTNNAC 6 cut(s) 299, 886, 1042, 1049, 1072, 1097
Hpy99I CGWCG 2 cut(s) 120, 173
HpyAV CCTTC 6 cut(s) 20, 48, 61, 96, 565, 794
HpyCH4III ACNGT 8 cut(s) 157, 182, 296, 303, 515, 883, 940, 1046
HpyCH4IV ACGT 1 cut(s) 259
HpyCH4V TGCA 5 cut(s) 275, 338, 695, 947, 1018
HpyF10VI GCNNNNNNNGC 6 cut(s) 206, 272, 701, 710, 719, 836
HpyF3I CTNAG 9 cut(s) 128, 409, 449, 619, 969, 981, 992, 1133, 1217
HpySE526I ACGT 1 cut(s) 259
Hsp92II CATG 3 cut(s) 494, 680, 955
HspAI GCGC 1 cut(s) 581
Kzo9I GATC 4 cut(s) 280, 421, 475, 748
LguI GCTCTTC 1 cut(s) 841
LmnI GCTCC 7 cut(s) 170, 199, 205, 574, 701, 721, 1218
Lsp1109I GCAGC 2 cut(s) 253, 725
LweI GCATC 2 cut(s) 262, 727
MaeI CTAG 4 cut(s) 249, 324, 425, 578
MaeII ACGT 1 cut(s) 259
MaeIII GTNAC 5 cut(s) 136, 224, 351, 402, 515
MalI GATC 4 cut(s) 282, 423, 477, 750
MbiI CCGCTC 1 cut(s) 1139
MboI GATC 4 cut(s) 280, 421, 475, 748
MboII GAAGA 8 cut(s) 33, 36, 51, 236, 275, 485, 614, 858
MflI RGATCY 3 cut(s) 421, 475, 748
MhlI GDGCHC 3 cut(s) 706, 874, 970
MlsI TGGCCA 1 cut(s) 930
MluCI AATT 5 cut(s) 22, 562, 650, 795, 932
MluNI TGGCCA 1 cut(s) 930
MlyI GAGTC 1 cut(s) 1112
MmeI TCCRAC 1 cut(s) 98
Mox20I TGGCCA 1 cut(s) 930
MscI TGGCCA 1 cut(s) 930
MseI TTAA 3 cut(s) 309, 854, 1234
Msp20I TGGCCA 1 cut(s) 930
MspA1I CMGCKG 1 cut(s) 209
MspI CCGG 2 cut(s) 203, 1143
MspR9I CCNGG 1 cut(s) 824
MvaI CCWGG 1 cut(s) 824
MwoI GCNNNNNNNGC 6 cut(s) 206, 272, 701, 710, 719, 836
NdeII GATC 4 cut(s) 280, 421, 475, 748
NheI GCTAGC 1 cut(s) 577
NlaIII CATG 3 cut(s) 494, 680, 955
NlaIV GGNNCC 3 cut(s) 184, 646, 1023
NmeAIII GCCGAG 1 cut(s) 621
NmuCI GTSAC 2 cut(s) 224, 515
NspI RCATGY 1 cut(s) 680
PciSI GCTCTTC 1 cut(s) 841
PfeI GAWTC 4 cut(s) 232, 343, 532, 892
PflMI CCANNNNNTGG 1 cut(s) 542
PkrI GCNGC 5 cut(s) 208, 268, 715, 829, 1141
PleI GAGTC 1 cut(s) 1112
PpsI GAGTC 1 cut(s) 1112
Psp6I CCWGG 1 cut(s) 822
PspGI CCWGG 1 cut(s) 822
PspN4I GGNNCC 3 cut(s) 184, 646, 1023
PspPI GGNCC 4 cut(s) 644, 910, 1022, 1108
PstI CTGCAG 1 cut(s) 697
PstNI CAGNNNCTG 2 cut(s) 197, 1216
PsuI RGATCY 3 cut(s) 421, 475, 748
RsaI GTAC 5 cut(s) 111, 885, 1043, 1048, 1098
RsaNI GTAC 5 cut(s) 110, 884, 1042, 1047, 1097
SapI GCTCTTC 1 cut(s) 841
SaqAI TTAA 3 cut(s) 309, 854, 1234
SatI GCNGC 5 cut(s) 207, 267, 714, 828, 1140
Sau3AI GATC 4 cut(s) 280, 421, 475, 748
Sau96I GGNCC 4 cut(s) 644, 910, 1022, 1108
SchI GAGTC 1 cut(s) 1112
ScrFI CCNGG 1 cut(s) 824
SduI GDGCHC 3 cut(s) 706, 874, 970
SfaNI GCATC 2 cut(s) 262, 727
SfcI CTRYAG 1 cut(s) 693
SinI GGWCC 1 cut(s) 1022
SmlI CTYRAG 2 cut(s) 287, 896
SmoI CTYRAG 2 cut(s) 287, 896
Sse9I AATT 5 cut(s) 22, 562, 650, 795, 932
SsiI CCGC 6 cut(s) 80, 93, 207, 827, 923, 1139
SspMI CTAG 4 cut(s) 249, 324, 425, 578
StyD4I CCNGG 1 cut(s) 822
StyI CCWWGG 1 cut(s) 323
TaaI ACNGT 8 cut(s) 157, 182, 296, 303, 515, 883, 940, 1046
TaiI ACGT 1 cut(s) 262
TaqI TCGA 1 cut(s) 279
TaqII GACCGA 1 cut(s) 1039
TasI AATT 5 cut(s) 22, 562, 650, 795, 932
TatI WGTACW 3 cut(s) 883, 1041, 1046
TauI GCSGC 3 cut(s) 209, 830, 1142
TfiI GAWTC 4 cut(s) 232, 343, 532, 892
Tru1I TTAA 3 cut(s) 309, 854, 1234
Tru9I TTAA 3 cut(s) 309, 854, 1234
TscAI CASTG 5 cut(s) 367, 711, 943, 1044, 1156
TseFI GTSAC 2 cut(s) 224, 515
TseI GCWGC 2 cut(s) 266, 713
Tsp45I GTSAC 2 cut(s) 224, 515
TspDTI ATGAA 3 cut(s) 486, 507, 671
TspGWI ACGGA 3 cut(s) 91, 157, 714
TspRI CASTG 5 cut(s) 367, 711, 943, 1044, 1156
Van91I CCANNNNNTGG 1 cut(s) 542
VpaK11BI GGWCC 1 cut(s) 1022
XagI CCTNNNNNAGG 1 cut(s) 252
XapI RAATTY 3 cut(s) 22, 562, 650
XceI RCATGY 1 cut(s) 680
XcmI CCANNNNNNNNNTGG 1 cut(s) 236
XmaJI CCTAGG 1 cut(s) 323
XspI CTAG 4 cut(s) 249, 324, 425, 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.