Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009436

Physical Location & Seq

Genomic Coordinates Forward (+)

22334771 .. 22338301

Gene Structure 3531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G267800.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGGGCGGCTGTGCTCCACCTCAGTTTCAGCCTTTTCTTGCGGCGGCTGCTATTACCAATTCTTCTACAACTACCACCCTCCTGCCTCTGTTGATATTACGTGGCCGCCCAGGGGGTGTAGGGTTAACAGTAGTATCAAAAAACGAAACAATGCCCCAATCAAAGCACTCAGTCCACTGCCATACTGTTCTTCTACTTGCCTTGCTATTTCTCCATGCAATGGAAAACCACCCAACAACAACTGTAACTACAAGTCCCTCCATAAATTTATTGCCAATTGTACTCCTTCTACTGATACTGGTACTGAGTCTATTGACACCGGGCTCCAAGATTCGTCGTCGTTTCCCGCCGTTGATTGTGTGGGGACAGGCCAGGACGTAGAGTGCGCGGTCTCTTCCTCATCCTCCGAAGAAATTCAACAACAAAGGACCGTTGGAGTGGAATTGATACAACAACAGCTGCAAGAATGGACAGTATTGGTCTCTCCCTTCTTCTTTTGGGGCACCTCTATGGTGGCAATGAAGGAGGTTTTGCCAAAGGCTGGCCCTTTCTTCGTCTCCTCCTTCCGCCTAATTCCTGCTGGCTTTCTCCTCATTGCGTTCGCCGCCTCTCGAGGCCGCCCCCTTCCATCTGGCCTCACTGCTTGGCTATCTATTGCGCTTTTTGGCCTCGTCGATGCCGCTTGTTTTCAAGGTTTTCTTGCTGAAGGTTTGCAGAGGACATCTGCTGGCCTCGGCAGTGTTATAATTGATTCACAACCTTTGACGGTGGCTATACTTGCGGCCTTGTTCTTGGGTGAGTCCATTGCGTTCCTTGGAGCTGCAGGGCTTGTTCTTGGTGTCATTGGACTTTTACTTCTCGAGGCACCTTCGCTTTCTGTTGATGGAAGCAACTTTTCATTGTGGCAAAGTGGGGAGTGGTGGATGCTTCTCGCAGCTCAGAGCATGGCAGTTGGCACAATCATGGTGCGCTGGGTTTCCAAGTACTCTGATCCTATTATGGCAACTGGATGGCACATGGTTATTGGTGGTCTACCCCTTGTTATGATCTCCATTCTTAATCATGAAAATGCTGTTAGTGGAAGTCTAATGAGTTTCACAGAAAATGATGCGTTGGCACTCCTTTATACATCCATTTTTGGAAGTGCCATCAGCTATGGTGTATACTTCTACAGTGCAACAAAAGGTAGCCTGACAAAGCTCAGCTCCCTTACCTTTCTGACCCCAATGTTTGCTTCTATATTTGGGTATCTATATCTTGGTGAGACCTTCTCACCCTTGCAATTGGCTGGGGCCATCATTACTATTGTTGCAATATACATGGTCAACTATAAAACCACTGTCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

450

Amino Acids

48.08

Weight (kDa)

5.64

Isoelectric Point (pI)

43.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02690
fragaria_vesca	FvH4_5g39720 FvH4_5g39720 FvH4_5g39720 FvH4_5g39720
malus_domestica	MD09G1187600.v1.1
prunus_persica	Prupe.8G267800_v2.0.a1 Prupe.8G267800_v2.0.a1 Prupe.8G267800_v2.0.a1
pyrus_communis	pycom11g27780
rosa_chinensis	RchiOBHm_Chr7g0242021
rosa_laevigata	RLG00000000516
rosa_multiflora	Rmu_co8506403.1_g000001 Rmu_sc0003559.1_g000016 Rmu_sc0011299.1_g000014
rosa_roxburghii	Rroxscaffold_3G00218270
rosa_rugosa	Rorug07G0349800
rosa_samantha	Rh7AG504600 Rh7BG476400 Rh7CG521100 Rh7DG490200
rosa_wichuraiana	Rw7G042650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	746
AccB1I	GGYRCC	2 cut(s)	503, 865
AccB7I	CCANNNNNTGG	2 cut(s)	221, 542
AccI	GTMKAC	2 cut(s)	1033, 1164
AccII	CGCG	1 cut(s)	389
AclWI	GGATC	1 cut(s)	986
AcoI	YGGCCR	1 cut(s)	104
AcsI	RAATTY	2 cut(s)	266, 414
AcuI	CTGAAG	1 cut(s)	726
AfaI	GTAC	3 cut(s)	283, 304, 986
AfiI	CCNNNNNNNGG	3 cut(s)	113, 221, 542
AgsI	TTSAA	2 cut(s)	419, 692
AjnI	CCWGG	2 cut(s)	110, 372
AjuI	GAANNNNNNNTTGG	2 cut(s)	1219, 1251
AluBI	AGCT	6 cut(s)	460, 821, 938, 1155, 1201, 1206
AluI	AGCT	6 cut(s)	460, 821, 938, 1155, 1201, 1206
Alw21I	GWGCWC	1 cut(s)	17
Alw26I	GTCTC	4 cut(s)	397, 487, 562, 1259
AlwI	GGATC	1 cut(s)	986
Ama87I	CYCGRG	2 cut(s)	612, 860
AoxI	GGCC	9 cut(s)	104, 370, 544, 616, 634, 667, 730, 783, 1293
ApeKI	GCWGC	4 cut(s)	48, 460, 821, 935
ApoI	RAATTY	2 cut(s)	266, 414
Asp700I	GAANNNNTTC	1 cut(s)	414
AspLEI	GCGC	3 cut(s)	389, 661, 972
AspS9I	GGNCC	3 cut(s)	429, 545, 1293
AsuC2I	CCSGG	1 cut(s)	322
AsuHPI	GGTGA	3 cut(s)	809, 1266, 1274
AvaI	CYCGRG	2 cut(s)	612, 860
AvaII	GGWCC	1 cut(s)	429
BaeGI	GKGCMC	1 cut(s)	506
BaeI	ACNNNNGTAYC	2 cut(s)	118, 151
BanI	GGYRCC	2 cut(s)	503, 865
BanII	GRGCYC	1 cut(s)	327
Bbv12I	GWGCWC	1 cut(s)	17
BbvI	GCAGC	4 cut(s)	35, 447, 808, 947
BccI	CCATC	5 cut(s)	637, 878, 1005, 1157, 1304
BceAI	ACGGC	1 cut(s)	335
BciT130I	CCWGG	2 cut(s)	112, 374
BcnI	CCSGG	1 cut(s)	322
BcoDI	GTCTC	4 cut(s)	397, 487, 562, 1259
BfmI	CTRYAG	2 cut(s)	822, 1171
BlpI	GCTNAGC	1 cut(s)	1202
BmcAI	AGTACT	1 cut(s)	986
Bme1390I	CCNGG	3 cut(s)	112, 322, 374
Bme18I	GGWCC	1 cut(s)	429
BmeT110I	CYCGRG	2 cut(s)	612, 860
BmgT120I	GGNCC	3 cut(s)	429, 545, 1293
BmiI	GGNNCC	4 cut(s)	326, 505, 867, 1294
BmrFI	CCNGG	3 cut(s)	112, 322, 374
BmsI	GCATC	3 cut(s)	667, 915, 1099
BplI	GAGNNNNNCTC	2 cut(s)	1256, 1288
Bpu1102I	GCTNAGC	1 cut(s)	1202
BpuMI	CCSGG	1 cut(s)	322
BsaAI	YACGTR	1 cut(s)	102
BsaI	GGTCTC	3 cut(s)	397, 487, 1259
BsaJI	CCNNGG	4 cut(s)	110, 111, 733, 814
Bsc4I	CCNNNNNNNGG	3 cut(s)	113, 221, 542
Bse1I	ACTGG	2 cut(s)	304, 1012
Bse3DI	GCAATG	4 cut(s)	226, 525, 594, 804
BseBI	CCWGG	2 cut(s)	112, 374
BseDI	CCNNGG	4 cut(s)	110, 111, 733, 814
BseGI	GGATG	4 cut(s)	401, 930, 1016, 1130
BseLI	CCNNNNNNNGG	3 cut(s)	113, 221, 542
BseMI	GCAATG	4 cut(s)	226, 525, 594, 804
BseMII	CTCAG	5 cut(s)	36, 184, 297, 953, 1216
BseNI	ACTGG	2 cut(s)	304, 1012
BseRI	GAGGAG	2 cut(s)	550, 581
BseSI	GKGCMC	1 cut(s)	506
BseXI	GCAGC	4 cut(s)	35, 447, 808, 947
BseYI	CCCAGC	2 cut(s)	972, 1289
Bsh1236I	CGCG	1 cut(s)	389
BshFI	GGCC	9 cut(s)	106, 372, 546, 618, 636, 669, 732, 785, 1295
BshNI	GGYRCC	2 cut(s)	503, 865
BsiHKAI	GWGCWC	1 cut(s)	17
BsiHKCI	CYCGRG	2 cut(s)	612, 860
BsiSI	CCGG	1 cut(s)	321
BslFI	GGGAC	2 cut(s)	241, 379
BslI	CCNNNNNNNGG	3 cut(s)	113, 221, 542
BsmAI	GTCTC	4 cut(s)	397, 487, 562, 1259
BsmBI	CGTCTC	1 cut(s)	562
BsmFI	GGGAC	2 cut(s)	241, 379
BsnI	GGCC	9 cut(s)	106, 372, 546, 618, 636, 669, 732, 785, 1295
Bso31I	GGTCTC	3 cut(s)	397, 487, 1259
BsoBI	CYCGRG	2 cut(s)	612, 860
Bsp1286I	GDGCHC	3 cut(s)	17, 327, 506
Bsp143I	GATC	2 cut(s)	991, 1047
Bsp1720I	GCTNAGC	1 cut(s)	1202
BspANI	GGCC	9 cut(s)	106, 372, 546, 618, 636, 669, 732, 785, 1295
BspCNI	CTCAG	5 cut(s)	35, 183, 298, 952, 1215
BspFNI	CGCG	1 cut(s)	389
BspHI	TCATGA	1 cut(s)	1063
BspLI	GGNNCC	4 cut(s)	326, 505, 867, 1294
BspMAI	CTGCAG	1 cut(s)	826
BspPI	GGATC	1 cut(s)	986
BspT107I	GGYRCC	2 cut(s)	503, 865
BspTNI	GGTCTC	3 cut(s)	397, 487, 1259
BsrDI	GCAATG	4 cut(s)	226, 525, 594, 804
BsrI	ACTGG	2 cut(s)	304, 1012
BssECI	CCNNGG	4 cut(s)	110, 111, 733, 814
BssMI	GATC	2 cut(s)	991, 1047
BssNAI	GTATAC	1 cut(s)	1165
BssT1I	CCWWGG	1 cut(s)	814
Bst1107I	GTATAC	1 cut(s)	1165
Bst2UI	CCWGG	2 cut(s)	112, 374
Bst4CI	ACNGT	8 cut(s)	131, 188, 245, 433, 475, 769, 1175, 1342
Bst6I	CTCTTC	1 cut(s)	400
BstBAI	YACGTR	1 cut(s)	102
BstC8I	GCNNGC	3 cut(s)	544, 583, 730
BstDEI	CTNAG	5 cut(s)	22, 170, 306, 939, 1202
BstF5I	GGATG	4 cut(s)	401, 930, 1016, 1130
BstFNI	CGCG	1 cut(s)	389
BstHHI	GCGC	3 cut(s)	389, 661, 972
BstKTI	GATC	2 cut(s)	994, 1050
BstMAI	GTCTC	4 cut(s)	397, 487, 562, 1259
BstMBI	GATC	2 cut(s)	991, 1047
BstMWI	GCNNNNNNNGC	3 cut(s)	48, 605, 779
BstNI	CCWGG	2 cut(s)	112, 374
BstSCI	CCNGG	3 cut(s)	110, 320, 372
BstSFI	CTRYAG	2 cut(s)	822, 1171
BstSLI	GKGCMC	1 cut(s)	506
BstUI	CGCG	1 cut(s)	389
BstV1I	GCAGC	4 cut(s)	35, 447, 808, 947
BstZ17I	GTATAC	1 cut(s)	1165
BsuRI	GGCC	9 cut(s)	106, 372, 546, 618, 636, 669, 732, 785, 1295
BtsCI	GGATG	4 cut(s)	401, 930, 1016, 1130
BtsI	GCAGTG	3 cut(s)	176, 639, 745
BtsIMutI	CAGTG	5 cut(s)	176, 639, 745, 1180, 1338
Cac8I	GCNNGC	3 cut(s)	544, 583, 730
CciI	TCATGA	1 cut(s)	1063
CfoI	GCGC	3 cut(s)	389, 661, 972
Cfr13I	GGNCC	3 cut(s)	429, 545, 1293
Csp6I	GTAC	3 cut(s)	282, 303, 985
CviAII	CATG	6 cut(s)	216, 946, 964, 1018, 1064, 1321
CviQI	GTAC	3 cut(s)	282, 303, 985
DdeI	CTNAG	5 cut(s)	22, 170, 306, 939, 1202
DpnI	GATC	2 cut(s)	993, 1049
DpnII	GATC	2 cut(s)	991, 1047
EaeI	YGGCCR	1 cut(s)	104
Eam1104I	CTCTTC	1 cut(s)	400
EarI	CTCTTC	1 cut(s)	400
EciI	GGCGGA	1 cut(s)	557
Eco130I	CCWWGG	1 cut(s)	814
Eco24I	GRGCYC	1 cut(s)	327
Eco31I	GGTCTC	3 cut(s)	397, 487, 1259
Eco47I	GGWCC	1 cut(s)	429
Eco57I	CTGAAG	1 cut(s)	726
Eco88I	CYCGRG	2 cut(s)	612, 860
EcoRII	CCWGG	2 cut(s)	110, 372
EcoT14I	CCWWGG	1 cut(s)	814
EcoT38I	GRGCYC	1 cut(s)	327
ErhI	CCWWGG	1 cut(s)	814
Esp3I	CGTCTC	1 cut(s)	562
FaeI	CATG	6 cut(s)	219, 949, 967, 1021, 1067, 1324
FalI	AAGNNNNNCTT	2 cut(s)	684, 716
FaqI	GGGAC	2 cut(s)	241, 379
FatI	CATG	6 cut(s)	215, 945, 963, 1017, 1063, 1320
FauI	CCCGC	1 cut(s)	355
FblI	GTMKAC	2 cut(s)	1033, 1164
FokI	GGATG	4 cut(s)	388, 937, 1023, 1117
FriOI	GRGCYC	1 cut(s)	327
GlaI	GCGC	3 cut(s)	388, 660, 971
GsaI	CCCAGC	2 cut(s)	976, 1293
HaeIII	GGCC	9 cut(s)	106, 372, 546, 618, 636, 669, 732, 785, 1295
HapII	CCGG	1 cut(s)	321
HhaI	GCGC	3 cut(s)	389, 661, 972
Hin1II	CATG	6 cut(s)	219, 949, 967, 1021, 1067, 1324
Hin6I	GCGC	3 cut(s)	387, 659, 970
HinP1I	GCGC	3 cut(s)	387, 659, 970
HincII	GTYRAC	2 cut(s)	127, 1327
HindII	GTYRAC	2 cut(s)	127, 1327
HinfI	GANTC	4 cut(s)	308, 332, 752, 800
HpaI	GTTAAC	1 cut(s)	127
HpaII	CCGG	1 cut(s)	321
HphI	GGTGA	3 cut(s)	809, 1266, 1274
Hpy166II	GTNNAC	5 cut(s)	127, 176, 1034, 1165, 1327
Hpy188I	TCNGA	4 cut(s)	409, 942, 991, 1221
Hpy188III	TCNNGA	3 cut(s)	612, 860, 1064
Hpy8I	GTNNAC	5 cut(s)	127, 176, 1034, 1165, 1327
Hpy99I	CGWCG	3 cut(s)	340, 343, 677
HpyAV	CCTTC	8 cut(s)	297, 499, 517, 574, 635, 701, 879, 1279
HpyCH4III	ACNGT	8 cut(s)	131, 188, 245, 433, 475, 769, 1175, 1342
HpyCH4IV	ACGT	2 cut(s)	101, 378
HpyCH4V	TGCA	7 cut(s)	219, 463, 715, 824, 1178, 1282, 1313
HpyF10VI	GCNNNNNNNGC	3 cut(s)	48, 605, 779
HpyF3I	CTNAG	5 cut(s)	22, 170, 306, 939, 1202
HpySE526I	ACGT	2 cut(s)	101, 378
Hsp92II	CATG	6 cut(s)	219, 949, 967, 1021, 1067, 1324
HspAI	GCGC	3 cut(s)	387, 659, 970
KspAI	GTTAAC	1 cut(s)	127
Kzo9I	GATC	2 cut(s)	991, 1047
LmnI	GCTCC	4 cut(s)	20, 330, 818, 1211
Lsp1109I	GCAGC	4 cut(s)	35, 447, 808, 947
LweI	GCATC	3 cut(s)	667, 915, 1099
MaeII	ACGT	2 cut(s)	101, 378
MaeIII	GTNAC	1 cut(s)	245
MalI	GATC	2 cut(s)	993, 1049
MboI	GATC	2 cut(s)	991, 1047
MboII	GAAGA	6 cut(s)	55, 183, 387, 422, 484, 544
MfeI	CAATTG	2 cut(s)	277, 1283
MhlI	GDGCHC	3 cut(s)	17, 327, 506
MluCI	AATT	8 cut(s)	59, 266, 277, 414, 443, 573, 747, 1283
MlyI	GAGTC	2 cut(s)	317, 809
MmeI	TCCRAC	1 cut(s)	415
MroXI	GAANNNNTTC	1 cut(s)	414
MseI	TTAA	2 cut(s)	126, 1059
MslI	CAYNNNNRTG	3 cut(s)	509, 962, 1068
MspA1I	CMGCKG	1 cut(s)	460
MspI	CCGG	1 cut(s)	321
MspR9I	CCNGG	3 cut(s)	112, 322, 374
MunI	CAATTG	2 cut(s)	277, 1283
MvaI	CCWGG	2 cut(s)	112, 374
MvnI	CGCG	1 cut(s)	389
MwoI	GCNNNNNNNGC	3 cut(s)	48, 605, 779
NciI	CCSGG	1 cut(s)	322
NdeII	GATC	2 cut(s)	991, 1047
NlaIII	CATG	6 cut(s)	219, 949, 967, 1021, 1067, 1324
NlaIV	GGNNCC	4 cut(s)	326, 505, 867, 1294
NmeAIII	GCCGAG	1 cut(s)	714
PaeR7I	CTCGAG	2 cut(s)	612, 860
PagI	TCATGA	1 cut(s)	1063
PasI	CCCWGGG	1 cut(s)	111
PdmI	GAANNNNTTC	1 cut(s)	414
PfeI	GAWTC	2 cut(s)	332, 752
PflMI	CCANNNNNTGG	2 cut(s)	221, 542
PleI	GAGTC	2 cut(s)	316, 808
PpsI	GAGTC	2 cut(s)	316, 808
Ppu21I	YACGTR	1 cut(s)	102
PsiI	TTATAA	1 cut(s)	746
Psp6I	CCWGG	2 cut(s)	110, 372
PspFI	CCCAGC	2 cut(s)	972, 1289
PspGI	CCWGG	2 cut(s)	110, 372
PspN4I	GGNNCC	4 cut(s)	326, 505, 867, 1294
PspPI	GGNCC	3 cut(s)	429, 545, 1293
PstI	CTGCAG	1 cut(s)	826
PvuII	CAGCTG	1 cut(s)	460
RsaI	GTAC	3 cut(s)	283, 304, 986
RsaNI	GTAC	3 cut(s)	282, 303, 985
RseI	CAYNNNNRTG	3 cut(s)	509, 962, 1068
SaqAI	TTAA	2 cut(s)	126, 1059
Sau3AI	GATC	2 cut(s)	991, 1047
Sau96I	GGNCC	3 cut(s)	429, 545, 1293
ScaI	AGTACT	1 cut(s)	986
SchI	GAGTC	2 cut(s)	317, 809
ScrFI	CCNGG	3 cut(s)	112, 322, 374
SduI	GDGCHC	3 cut(s)	17, 327, 506
SfaNI	GCATC	3 cut(s)	667, 915, 1099
SfcI	CTRYAG	2 cut(s)	822, 1171
Sfr274I	CTCGAG	2 cut(s)	612, 860
SinI	GGWCC	1 cut(s)	429
SlaI	CTCGAG	2 cut(s)	612, 860
SmiMI	CAYNNNNRTG	3 cut(s)	509, 962, 1068
SmlI	CTYRAG	2 cut(s)	612, 860
SmoI	CTYRAG	2 cut(s)	612, 860
Sse9I	AATT	8 cut(s)	59, 266, 277, 414, 443, 573, 747, 1283
StyD4I	CCNGG	3 cut(s)	110, 320, 372
StyI	CCWWGG	1 cut(s)	814
TaaI	ACNGT	8 cut(s)	131, 188, 245, 433, 475, 769, 1175, 1342
TaiI	ACGT	2 cut(s)	104, 381
TaqI	TCGA	4 cut(s)	613, 675, 861, 1344
TasI	AATT	8 cut(s)	59, 266, 277, 414, 443, 573, 747, 1283
TatI	WGTACW	2 cut(s)	281, 984
TauI	GCSGC	8 cut(s)	10, 45, 48, 109, 608, 621, 683, 785
TfiI	GAWTC	2 cut(s)	332, 752
Tru1I	TTAA	2 cut(s)	126, 1059
Tru9I	TTAA	2 cut(s)	126, 1059
TscAI	CASTG	5 cut(s)	183, 646, 745, 1180, 1345
TseI	GCWGC	4 cut(s)	48, 460, 821, 935
TspDTI	ATGAA	3 cut(s)	536, 888, 1080
TspRI	CASTG	5 cut(s)	183, 646, 745, 1180, 1345
Van91I	CCANNNNNTGG	2 cut(s)	221, 542
VpaK11BI	GGWCC	1 cut(s)	429
XapI	RAATTY	2 cut(s)	266, 414
XhoI	CTCGAG	2 cut(s)	612, 860
XmiI	GTMKAC	2 cut(s)	1033, 1164
XmnI	GAANNNNTTC	1 cut(s)	414
ZrmI	AGTACT	1 cut(s)	986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.