RchiOBHm_Chr7g0242021

WAT1-related protein At3g02690

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
68098832 .. 68105484
6653 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21691

Sequence Viewer

Length: 1290 bp
ATGGGGTTGTTATCCTCAGTTTCTGCTTGCTACCGTTGTGGCTGTTATTACGACCCTGGGACTGTTCGGCGGCCGAATTTAGATCGACGTTTGGTTAATGATATCAGGAAAAGAAACAGTTGGCCGAGGAAAGCGCTATCATATTCTAATTGCCTCCTTATTTCTCAATATAATCATAATCGCAAACCACCAACGCACCCGAATCCACACACAAACTACTACAAGTCCATTCATTTTGGTGCCAATTGCACTGGCAGTAGCGGTAGTGAGACCACCGAGCTCGAAGATTCGTCTGACATCGTTGATTGTGTGGGAACAGGGCAAGACGACGTAGTAGAGTGCGTGGTCACAGCCGAAGAAACTGGTGGTCCTGGATTGGAACTGGAATTACTAGAACAAGTGCAAGAATGGGCAGTACTGGTCTCTCCCTTCTTCTTTTGGGGTACGGCTATGGTGGCCATGAAGGGGATTCTGCCAAAGACGGGCCCTTTCTTCATCTCAGCCTTCCGTCTAATTCCTGCTGGCTTTCTCCTCGTTGCCTTCGCCGCCTATAGAGGCCGCCCCTTTCCCTCTGGCCTCACCGCTTGGCTTTCTATTGCGCTTTTCGGCCTCGTTGATGCTGCTTGTTTTCAAGGATTTCTTGCTCAAGGTTTGCAGAGGACATCTGCTGGTCTTGGCAGCGTTATAATTGATTCACAACCTTTGACAGTCGCCATACTTGCGGCCTTGTTATTTGGTGAGTCCATTGGCTTCCTTGGAGCTGCAGGGCTTGTTCTTGGCGTCATTGGACTTTTACTTCTTGAGGCACCTTCACTTGCTTTTGATGGAAGTAACTCTTCATTGTGGCAAAGTGGGGAGTGGTGGATGCTTCTCTCAGCTCAGAGCATGGCAGTTGGTACAGTCATGGTGCGTTGGGTTTCCAAATACTCTGATCCTATTATGGCAACTGGATGGCATATGGTTATTGGAGGCCTGCCTCTTGTTATAATCTCCATTCTTAATCATGACAATGCTGTCAGCGGGAGTCTCATCGAGTTCACAGCAAATGATACATTGGCACTCTTTTATACATCCATTTTTGGAAGTGCCATCAGCTATGGTGTATACTTCTACAGTGCAACAAAAGGTAGCCTGACAAAGCTCAGCTCCCTCACCTTTCTAACCCCAATGTTTGCTTCCATATTTGGGTTTCTATATCTTGGTGAGACCTTCTCACCCTTGCAACTGGGTGGAGCCATGATTACTATTGTTGGAATATACTTGGTTAACTACAAAACCGTTGTTGAATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

46.28

Weight (kDa)

5.56

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 141 - 267 4.6e-23 EamA-like transporter family
EamA PF00892 284 - 423 9.1e-26 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 686, 986
AasI GACNNNNNNGTC 1 cut(s) 1013
AccB1I GGYRCC 2 cut(s) 239, 805
AccI GTMKAC 1 cut(s) 1104
AciI CCGC 7 cut(s) 70, 261, 546, 559, 582, 722, 1020
AclWI GGATC 1 cut(s) 926
AcoI YGGCCR 3 cut(s) 71, 122, 456
AcsI RAATTY 1 cut(s) 76
AcyI GRCGYC 1 cut(s) 780
AfaI GTAC 3 cut(s) 417, 445, 898
AfeI AGCGCT 1 cut(s) 135
AfiI CCNNNNNNNGG 3 cut(s) 465, 482, 1185
AgsI TTSAA 2 cut(s) 632, 1286
AjnI CCWGG 2 cut(s) 55, 370
AjuI GAANNNNNNNTTGG 2 cut(s) 1159, 1191
AluBI AGCT 6 cut(s) 280, 761, 878, 1095, 1141, 1146
AluI AGCT 6 cut(s) 280, 761, 878, 1095, 1141, 1146
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 4 cut(s) 263, 427, 1031, 1199
AlwI GGATC 1 cut(s) 926
AlwNI CAGNNNCTG 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 135
AoxI GGCC 9 cut(s) 71, 122, 456, 484, 556, 574, 607, 723, 970
ApaI GGGCCC 1 cut(s) 488
ApeKI GCWGC 3 cut(s) 620, 678, 761
ApoI RAATTY 1 cut(s) 76
AspLEI GCGC 2 cut(s) 136, 601
AspS9I GGNCC 3 cut(s) 368, 484, 485
AsuHPI GGTGA 5 cut(s) 571, 749, 1144, 1206, 1214
AvaII GGWCC 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 488
BalI TGGCCA 1 cut(s) 458
BanI GGYRCC 2 cut(s) 239, 805
BanII GRGCYC 2 cut(s) 282, 488
Bbv12I GWGCWC 1 cut(s) 282
BbvI GCAGC 3 cut(s) 607, 690, 748
BccI CCATC 3 cut(s) 818, 945, 1097
BceAI ACGGC 1 cut(s) 462
BciT130I CCWGG 2 cut(s) 57, 372
BcoDI GTCTC 4 cut(s) 263, 427, 1031, 1199
BfaI CTAG 1 cut(s) 392
BfmI CTRYAG 3 cut(s) 550, 762, 1111
BfoI RGCGCY 1 cut(s) 137
BisI GCNGC 7 cut(s) 71, 546, 559, 621, 679, 723, 762
BlpI GCTNAGC 1 cut(s) 1142
BlsI GCNGC 7 cut(s) 72, 547, 560, 622, 680, 724, 763
BmcAI AGTACT 1 cut(s) 417
Bme1390I CCNGG 2 cut(s) 57, 372
Bme18I GGWCC 1 cut(s) 368
BmgT120I GGNCC 3 cut(s) 368, 484, 485
BmiI GGNNCC 4 cut(s) 241, 486, 807, 1234
BmrFI CCNGG 2 cut(s) 57, 372
BmrI ACTGGG 1 cut(s) 1235
BmsI GCATC 2 cut(s) 607, 855
BmuI ACTGGG 1 cut(s) 1235
BplI GAGNNNNNCTC 2 cut(s) 1196, 1228
Bpu1102I GCTNAGC 1 cut(s) 1142
BpuEI CTTGAG 2 cut(s) 630, 821
BsaHI GRCGYC 1 cut(s) 780
BsaI GGTCTC 3 cut(s) 263, 427, 1199
BsaJI CCNNGG 4 cut(s) 55, 56, 125, 754
Bsc4I CCNNNNNNNGG 3 cut(s) 465, 482, 1185
Bse1I ACTGG 6 cut(s) 256, 367, 387, 423, 952, 1230
BseBI CCWGG 2 cut(s) 57, 372
BseDI CCNNGG 4 cut(s) 55, 56, 125, 754
BseGI GGATG 3 cut(s) 870, 956, 1070
BseLI CCNNNNNNNGG 3 cut(s) 465, 482, 1185
BseMII CTCAG 5 cut(s) 30, 513, 888, 893, 1156
BseNI ACTGG 6 cut(s) 256, 367, 387, 423, 952, 1230
BseRI GAGGAG 1 cut(s) 521
BseSI GKGCMC 1 cut(s) 488
BseX3I CGGCCG 1 cut(s) 71
BseXI GCAGC 3 cut(s) 607, 690, 748
Bsh1285I CGRYCG 1 cut(s) 74
BshFI GGCC 9 cut(s) 73, 124, 458, 486, 558, 576, 609, 725, 972
BshNI GGYRCC 2 cut(s) 239, 805
BsiEI CGRYCG 1 cut(s) 74
BsiHKAI GWGCWC 1 cut(s) 282
BslFI GGGAC 1 cut(s) 73
BslI CCNNNNNNNGG 3 cut(s) 465, 482, 1185
BsmAI GTCTC 4 cut(s) 263, 427, 1031, 1199
BsmFI GGGAC 1 cut(s) 73
BsnI GGCC 9 cut(s) 73, 124, 458, 486, 558, 576, 609, 725, 972
Bso31I GGTCTC 3 cut(s) 263, 427, 1199
Bsp120I GGGCCC 1 cut(s) 484
Bsp1286I GDGCHC 2 cut(s) 282, 488
Bsp143I GATC 2 cut(s) 82, 931
Bsp1720I GCTNAGC 1 cut(s) 1142
BspACI CCGC 7 cut(s) 70, 261, 546, 559, 582, 722, 1020
BspANI GGCC 9 cut(s) 73, 124, 458, 486, 558, 576, 609, 725, 972
BspCNI CTCAG 5 cut(s) 29, 512, 887, 892, 1155
BspHI TCATGA 1 cut(s) 1003
BspLI GGNNCC 4 cut(s) 241, 486, 807, 1234
BspMAI CTGCAG 1 cut(s) 766
BspPI GGATC 1 cut(s) 926
BspT107I GGYRCC 2 cut(s) 239, 805
BspTNI GGTCTC 3 cut(s) 263, 427, 1199
BsrI ACTGG 6 cut(s) 256, 367, 387, 423, 952, 1230
BssECI CCNNGG 4 cut(s) 55, 56, 125, 754
BssMI GATC 2 cut(s) 82, 931
BssNAI GTATAC 1 cut(s) 1105
BssNI GRCGYC 1 cut(s) 780
BssT1I CCWWGG 1 cut(s) 754
Bst1107I GTATAC 1 cut(s) 1105
Bst2UI CCWGG 2 cut(s) 57, 372
Bst4CI ACNGT 7 cut(s) 35, 64, 119, 709, 901, 1115, 1279
Bst6I CTCTTC 1 cut(s) 841
BstACI GRCGYC 1 cut(s) 780
BstC8I GCNNGC 3 cut(s) 28, 523, 974
BstDEI CTNAG 5 cut(s) 16, 499, 874, 879, 1142
BstF5I GGATG 3 cut(s) 870, 956, 1070
BstH2I RGCGCY 1 cut(s) 137
BstHHI GCGC 2 cut(s) 136, 601
BstKTI GATC 2 cut(s) 85, 934
BstMAI GTCTC 4 cut(s) 263, 427, 1031, 1199
BstMBI GATC 2 cut(s) 82, 931
BstMCI CGRYCG 1 cut(s) 74
BstMWI GCNNNNNNNGC 3 cut(s) 455, 545, 719
BstNI CCWGG 2 cut(s) 57, 372
BstSCI CCNGG 2 cut(s) 55, 370
BstSFI CTRYAG 3 cut(s) 550, 762, 1111
BstSLI GKGCMC 1 cut(s) 488
BstV1I GCAGC 3 cut(s) 607, 690, 748
BstZ17I GTATAC 1 cut(s) 1105
BstZI CGGCCG 1 cut(s) 71
BsuRI GGCC 9 cut(s) 73, 124, 458, 486, 558, 576, 609, 725, 972
BtsCI GGATG 3 cut(s) 870, 956, 1070
BtsIMutI CAGTG 2 cut(s) 249, 1120
Cac8I GCNNGC 3 cut(s) 28, 523, 974
CaiI CAGNNNCTG 1 cut(s) 23
CciI TCATGA 1 cut(s) 1003
CfoI GCGC 2 cut(s) 136, 601
Cfr13I GGNCC 3 cut(s) 368, 484, 485
CseI GACGC 1 cut(s) 769
Csp6I GTAC 3 cut(s) 416, 444, 897
CviAII CATG 5 cut(s) 460, 886, 904, 1004, 1237
CviQI GTAC 3 cut(s) 416, 444, 897
DdeI CTNAG 5 cut(s) 16, 499, 874, 879, 1142
DpnI GATC 2 cut(s) 84, 933
DpnII GATC 2 cut(s) 82, 931
DrdI GACNNNNNNGTC 1 cut(s) 1013
DseDI GACNNNNNNGTC 1 cut(s) 1013
EaeI YGGCCR 3 cut(s) 71, 122, 456
EagI CGGCCG 1 cut(s) 71
Eam1104I CTCTTC 1 cut(s) 841
EarI CTCTTC 1 cut(s) 841
Ecl136II GAGCTC 1 cut(s) 280
EclXI CGGCCG 1 cut(s) 71
Eco130I CCWWGG 1 cut(s) 754
Eco147I AGGCCT 1 cut(s) 972
Eco24I GRGCYC 2 cut(s) 282, 488
Eco31I GGTCTC 3 cut(s) 263, 427, 1199
Eco32I GATATC 1 cut(s) 103
Eco47I GGWCC 1 cut(s) 368
Eco47III AGCGCT 1 cut(s) 135
Eco52I CGGCCG 1 cut(s) 71
Eco53kI GAGCTC 1 cut(s) 280
EcoICRI GAGCTC 1 cut(s) 280
EcoO109I RGGNCCY 1 cut(s) 485
EcoRII CCWGG 2 cut(s) 55, 370
EcoRV GATATC 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 754
EcoT38I GRGCYC 2 cut(s) 282, 488
ErhI CCWWGG 1 cut(s) 754
FaeI CATG 5 cut(s) 463, 889, 907, 1007, 1240
FalI AAGNNNNNCTT 4 cut(s) 624, 656, 820, 852
FaqI GGGAC 1 cut(s) 73
FatI CATG 5 cut(s) 459, 885, 903, 1003, 1236
FauI CCCGC 1 cut(s) 1013
FauNDI CATATG 1 cut(s) 957
FblI GTMKAC 1 cut(s) 1104
Fnu4HI GCNGC 7 cut(s) 71, 546, 559, 621, 679, 723, 762
FokI GGATG 3 cut(s) 877, 963, 1057
FriOI GRGCYC 2 cut(s) 282, 488
Fsp4HI GCNGC 7 cut(s) 71, 546, 559, 621, 679, 723, 762
FspBI CTAG 1 cut(s) 392
GlaI GCGC 2 cut(s) 135, 600
GluI GCNGC 7 cut(s) 71, 546, 559, 621, 679, 723, 762
HaeII RGCGCY 1 cut(s) 137
HaeIII GGCC 9 cut(s) 73, 124, 458, 486, 558, 576, 609, 725, 972
HgaI GACGC 1 cut(s) 769
HhaI GCGC 2 cut(s) 136, 601
Hin1I GRCGYC 1 cut(s) 780
Hin1II CATG 5 cut(s) 463, 889, 907, 1007, 1240
Hin6I GCGC 2 cut(s) 134, 599
HinP1I GCGC 2 cut(s) 134, 599
HincII GTYRAC 1 cut(s) 1267
HindII GTYRAC 1 cut(s) 1267
HinfI GANTC 6 cut(s) 202, 287, 469, 692, 740, 1024
HpaI GTTAAC 1 cut(s) 1267
HphI GGTGA 5 cut(s) 571, 749, 1144, 1206, 1214
Hpy166II GTNNAC 3 cut(s) 1038, 1105, 1267
Hpy188I TCNGA 3 cut(s) 295, 882, 931
Hpy188III TCNNGA 3 cut(s) 106, 800, 1004
Hpy8I GTNNAC 3 cut(s) 1038, 1105, 1267
Hpy99I CGWCG 2 cut(s) 90, 332
HpyAV CCTTC 6 cut(s) 439, 457, 514, 550, 819, 1219
HpyCH4III ACNGT 7 cut(s) 35, 64, 119, 709, 901, 1115, 1279
HpyCH4IV ACGT 2 cut(s) 88, 330
HpyCH4V TGCA 6 cut(s) 249, 403, 655, 764, 1118, 1222
HpyF10VI GCNNNNNNNGC 3 cut(s) 455, 545, 719
HpyF3I CTNAG 5 cut(s) 16, 499, 874, 879, 1142
HpySE526I ACGT 2 cut(s) 88, 330
Hsp92I GRCGYC 1 cut(s) 780
Hsp92II CATG 5 cut(s) 463, 889, 907, 1007, 1240
HspAI GCGC 2 cut(s) 134, 599
KspAI GTTAAC 1 cut(s) 1267
Kzo9I GATC 2 cut(s) 82, 931
LmnI GCTCC 3 cut(s) 758, 1151, 1232
Lsp1109I GCAGC 3 cut(s) 607, 690, 748
LweI GCATC 2 cut(s) 607, 855
MaeI CTAG 1 cut(s) 392
MaeII ACGT 2 cut(s) 88, 330
MaeIII GTNAC 2 cut(s) 346, 830
MalI GATC 2 cut(s) 84, 933
MboI GATC 2 cut(s) 82, 931
MboII GAAGA 5 cut(s) 296, 368, 424, 484, 828
MfeI CAATTG 1 cut(s) 244
MhlI GDGCHC 2 cut(s) 282, 488
MlsI TGGCCA 1 cut(s) 458
MluCI AATT 6 cut(s) 76, 148, 244, 386, 513, 687
MluNI TGGCCA 1 cut(s) 458
MlyI GAGTC 2 cut(s) 749, 1033
MmeI TCCRAC 1 cut(s) 1231
Mox20I TGGCCA 1 cut(s) 458
MscI TGGCCA 1 cut(s) 458
MseI TTAA 3 cut(s) 96, 999, 1266
MslI CAYNNNNRTG 2 cut(s) 237, 1008
Msp20I TGGCCA 1 cut(s) 458
MspA1I CMGCKG 1 cut(s) 1020
MspR9I CCNGG 2 cut(s) 57, 372
MunI CAATTG 1 cut(s) 244
MvaI CCWGG 2 cut(s) 57, 372
MwoI GCNNNNNNNGC 3 cut(s) 455, 545, 719
NdeI CATATG 1 cut(s) 957
NdeII GATC 2 cut(s) 82, 931
NlaIII CATG 5 cut(s) 463, 889, 907, 1007, 1240
NlaIV GGNNCC 4 cut(s) 241, 486, 807, 1234
NmeAIII GCCGAG 1 cut(s) 150
NmuCI GTSAC 1 cut(s) 346
PagI TCATGA 1 cut(s) 1003
PasI CCCWGGG 1 cut(s) 56
PceI AGGCCT 1 cut(s) 972
PfeI GAWTC 4 cut(s) 202, 287, 469, 692
PfoI TCCNGGA 1 cut(s) 370
PkrI GCNGC 7 cut(s) 72, 547, 560, 622, 680, 724, 763
PleI GAGTC 2 cut(s) 748, 1032
PpsI GAGTC 2 cut(s) 748, 1032
PsiI TTATAA 2 cut(s) 686, 986
Psp124BI GAGCTC 1 cut(s) 282
Psp6I CCWGG 2 cut(s) 55, 370
PspGI CCWGG 2 cut(s) 55, 370
PspN4I GGNNCC 4 cut(s) 241, 486, 807, 1234
PspOMI GGGCCC 1 cut(s) 484
PspPI GGNCC 3 cut(s) 368, 484, 485
PsrI GAACNNNNNNTAC 2 cut(s) 372, 404
PstI CTGCAG 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 23
RsaI GTAC 3 cut(s) 417, 445, 898
RsaNI GTAC 3 cut(s) 416, 444, 897
RseI CAYNNNNRTG 2 cut(s) 237, 1008
SacI GAGCTC 1 cut(s) 282
SaqAI TTAA 3 cut(s) 96, 999, 1266
SatI GCNGC 7 cut(s) 71, 546, 559, 621, 679, 723, 762
Sau3AI GATC 2 cut(s) 82, 931
Sau96I GGNCC 3 cut(s) 368, 484, 485
ScaI AGTACT 1 cut(s) 417
SchI GAGTC 2 cut(s) 749, 1033
ScrFI CCNGG 2 cut(s) 57, 372
SduI GDGCHC 2 cut(s) 282, 488
SfaNI GCATC 2 cut(s) 607, 855
SfcI CTRYAG 3 cut(s) 550, 762, 1111
SinI GGWCC 1 cut(s) 368
SmiMI CAYNNNNRTG 2 cut(s) 237, 1008
SmlI CTYRAG 2 cut(s) 645, 800
SmoI CTYRAG 2 cut(s) 645, 800
Sse9I AATT 6 cut(s) 76, 148, 244, 386, 513, 687
SseBI AGGCCT 1 cut(s) 972
SsiI CCGC 7 cut(s) 70, 261, 546, 559, 582, 722, 1020
SspMI CTAG 1 cut(s) 392
SstI GAGCTC 1 cut(s) 282
StuI AGGCCT 1 cut(s) 972
StyD4I CCNGG 2 cut(s) 55, 370
StyI CCWWGG 1 cut(s) 754
TaaI ACNGT 7 cut(s) 35, 64, 119, 709, 901, 1115, 1279
TaiI ACGT 2 cut(s) 91, 333
TaqI TCGA 3 cut(s) 85, 282, 1032
TasI AATT 6 cut(s) 76, 148, 244, 386, 513, 687
TatI WGTACW 1 cut(s) 415
TauI GCSGC 4 cut(s) 73, 548, 561, 725
TfiI GAWTC 4 cut(s) 202, 287, 469, 692
Tru1I TTAA 3 cut(s) 96, 999, 1266
Tru9I TTAA 3 cut(s) 96, 999, 1266
TscAI CASTG 2 cut(s) 256, 1120
TseFI GTSAC 1 cut(s) 346
TseI GCWGC 3 cut(s) 620, 678, 761
Tsp45I GTSAC 1 cut(s) 346
TspDTI ATGAA 4 cut(s) 221, 476, 484, 828
TspGWI ACGGA 1 cut(s) 497
TspRI CASTG 2 cut(s) 256, 1120
VpaK11BI GGWCC 1 cut(s) 368
XapI RAATTY 1 cut(s) 76
XmiI GTMKAC 1 cut(s) 1104
XspI CTAG 1 cut(s) 392
ZrmI AGTACT 1 cut(s) 417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.