Lipase (class 3)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02660 |
| fragaria_vesca | FvH4_5g39470 FvH4_5g39470 FvH4_5g39470 |
| malus_domestica | MD03G1296900.v1.1 MD11G1316500.v1.1 |
| prunus_persica | Prupe.8G270300_v2.0.a1 |
| pyrus_communis | pycom03g23540 pycom11g27620 |
| rosa_chinensis | RchiOBHm_Chr7g0241801 |
| rosa_laevigata | RLG00000000543 |
| rosa_multiflora | Rmu_sc0010095.1_g000001 Rmu_sc0042388.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00218670 |
| rosa_rugosa | Rorug07G0347200 Rorug07G0347200 Rorug07G0347300 |
| rosa_samantha | Rh7AG501700 Rh7BG473000 Rh7CG518000 Rh7DG486900 |
| rosa_wichuraiana | Rw7G042410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 367 |
| Acc36I | ACCTGC | 1 cut(s) | 2242 |
| Acc65I | GGTACC | 1 cut(s) | 2230 |
| AccB1I | GGYRCC | 2 cut(s) | 1205, 2230 |
| AccI | GTMKAC | 1 cut(s) | 147 |
| AccII | CGCG | 1 cut(s) | 56 |
| AclWI | GGATC | 3 cut(s) | 120, 247, 1891 |
| AcsI | RAATTY | 5 cut(s) | 402, 804, 1150, 1757, 1957 |
| AcuI | CTGAAG | 3 cut(s) | 1035, 1377, 1770 |
| AcvI | CACGTG | 1 cut(s) | 412 |
| AcyI | GRCGYC | 1 cut(s) | 303 |
| AfaI | GTAC | 4 cut(s) | 88, 650, 1608, 2232 |
| AfeI | AGCGCT | 1 cut(s) | 75 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 141, 273, 316 |
| AflIII | ACRYGT | 1 cut(s) | 1157 |
| AjiI | CACGTC | 1 cut(s) | 1954 |
| AjnI | CCWGG | 5 cut(s) | 232, 511, 703, 1247, 2018 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 614, 646 |
| Alw21I | GWGCWC | 2 cut(s) | 492, 1734 |
| Alw26I | GTCTC | 6 cut(s) | 423, 983, 989, 1593, 1697, 2017 |
| AlwI | GGATC | 3 cut(s) | 120, 247, 1891 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 68, 986, 1351 |
| Ama87I | CYCGRG | 1 cut(s) | 607 |
| Aor51HI | AGCGCT | 1 cut(s) | 75 |
| AoxI | GGCC | 7 cut(s) | 7, 230, 349, 509, 2016, 2048, 2096 |
| ApoI | RAATTY | 5 cut(s) | 402, 804, 1150, 1757, 1957 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2177 |
| Asp718I | GGTACC | 1 cut(s) | 2230 |
| AspLEI | GCGC | 5 cut(s) | 76, 116, 735, 1516, 2034 |
| AspS9I | GGNCC | 4 cut(s) | 260, 349, 509, 2049 |
| AsuC2I | CCSGG | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 7 cut(s) | 1002, 1158, 1397, 1547, 1766, 1872, 1996 |
| AvaI | CYCGRG | 1 cut(s) | 607 |
| AvaII | GGWCC | 1 cut(s) | 260 |
| BaeGI | GKGCMC | 1 cut(s) | 2124 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 70, 103 |
| BanI | GGYRCC | 2 cut(s) | 1205, 2230 |
| BanII | GRGCYC | 2 cut(s) | 1275, 1734 |
| BauI | CACGAG | 2 cut(s) | 1380, 2123 |
| BbrPI | CACGTG | 1 cut(s) | 412 |
| BbsI | GAAGAC | 2 cut(s) | 185, 840 |
| Bbv12I | GWGCWC | 2 cut(s) | 492, 1734 |
| BccI | CCATC | 7 cut(s) | 103, 109, 976, 1377, 1525, 1529, 1779 |
| BceAI | ACGGC | 2 cut(s) | 183, 290 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 554, 588 |
| BciT130I | CCWGG | 5 cut(s) | 234, 513, 705, 1249, 2020 |
| BciVI | GTATCC | 1 cut(s) | 39 |
| BclI | TGATCA | 2 cut(s) | 1537, 2268 |
| BcnI | CCSGG | 1 cut(s) | 142 |
| BcoDI | GTCTC | 6 cut(s) | 423, 983, 989, 1593, 1697, 2017 |
| BfaI | CTAG | 1 cut(s) | 827 |
| BfmI | CTRYAG | 2 cut(s) | 69, 927 |
| BfoI | RGCGCY | 3 cut(s) | 77, 117, 2035 |
| BfuAI | ACCTGC | 1 cut(s) | 2242 |
| BfuI | GTATCC | 1 cut(s) | 39 |
| BlpI | GCTNAGC | 3 cut(s) | 465, 585, 1432 |
| Bme1390I | CCNGG | 6 cut(s) | 142, 234, 513, 705, 1249, 2020 |
| Bme18I | GGWCC | 1 cut(s) | 260 |
| BmeT110I | CYCGRG | 1 cut(s) | 607 |
| BmgBI | CACGTC | 1 cut(s) | 1954 |
| BmgT120I | GGNCC | 4 cut(s) | 260, 349, 509, 2049 |
| BmiI | GGNNCC | 5 cut(s) | 262, 1207, 1933, 2051, 2232 |
| BmrFI | CCNGG | 6 cut(s) | 142, 234, 513, 705, 1249, 2020 |
| BmrI | ACTGGG | 2 cut(s) | 400, 1419 |
| BmsI | GCATC | 9 cut(s) | 273, 562, 838, 908, 1253, 1338, 1816, 1825, 2114 |
| BmuI | ACTGGG | 2 cut(s) | 400, 1419 |
| BpiI | GAAGAC | 2 cut(s) | 185, 840 |
| BpmI | CTGGAG | 1 cut(s) | 255 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 465, 585, 1432 |
| BpuEI | CTTGAG | 2 cut(s) | 1640, 1913 |
| BpuMI | CCSGG | 1 cut(s) | 142 |
| Bsa29I | ATCGAT | 1 cut(s) | 749 |
| BsaAI | YACGTR | 1 cut(s) | 412 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1194 |
| BsaHI | GRCGYC | 1 cut(s) | 303 |
| BsaI | GGTCTC | 1 cut(s) | 423 |
| BsaJI | CCNNGG | 3 cut(s) | 141, 165, 1565 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 141, 273, 316 |
| Bse1I | ACTGG | 4 cut(s) | 395, 1245, 1296, 1414 |
| Bse3DI | GCAATG | 2 cut(s) | 481, 2195 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1194 |
| BseBI | CCWGG | 5 cut(s) | 234, 513, 705, 1249, 2020 |
| BseCI | ATCGAT | 1 cut(s) | 749 |
| BseDI | CCNNGG | 3 cut(s) | 141, 165, 1565 |
| BseGI | GGATG | 8 cut(s) | 10, 81, 288, 968, 1056, 1244, 1300, 1517 |
| BseJI | GATNNNNATC | 1 cut(s) | 1194 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 141, 273, 316 |
| BseMI | GCAATG | 2 cut(s) | 481, 2195 |
| BseMII | CTCAG | 9 cut(s) | 119, 456, 510, 576, 771, 978, 984, 1071, 1104 |
| BseNI | ACTGG | 4 cut(s) | 395, 1245, 1296, 1414 |
| BseRI | GAGGAG | 3 cut(s) | 267, 350, 359 |
| BseSI | GKGCMC | 1 cut(s) | 2124 |
| BsgI | GTGCAG | 2 cut(s) | 1842, 2220 |
| Bsh1236I | CGCG | 1 cut(s) | 56 |
| BshFI | GGCC | 7 cut(s) | 9, 232, 351, 511, 2018, 2050, 2098 |
| BshNI | GGYRCC | 2 cut(s) | 1205, 2230 |
| BshVI | ATCGAT | 1 cut(s) | 749 |
| BsiHKAI | GWGCWC | 2 cut(s) | 492, 1734 |
| BsiHKCI | CYCGRG | 1 cut(s) | 607 |
| BsiSI | CCGG | 1 cut(s) | 141 |
| BslFI | GGGAC | 2 cut(s) | 293, 1302 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 141, 273, 316 |
| BsmAI | GTCTC | 6 cut(s) | 423, 983, 989, 1593, 1697, 2017 |
| BsmFI | GGGAC | 2 cut(s) | 293, 1302 |
| BsmI | GAATGC | 3 cut(s) | 943, 1414, 1616 |
| BsnI | GGCC | 7 cut(s) | 9, 232, 351, 511, 2018, 2050, 2098 |
| Bso31I | GGTCTC | 1 cut(s) | 423 |
| BsoBI | CYCGRG | 1 cut(s) | 607 |
| Bsp1286I | GDGCHC | 4 cut(s) | 492, 1275, 1734, 2124 |
| Bsp143I | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 465, 585, 1432 |
| BspANI | GGCC | 7 cut(s) | 9, 232, 351, 511, 2018, 2050, 2098 |
| BspCNI | CTCAG | 9 cut(s) | 118, 457, 511, 577, 772, 979, 985, 1070, 1103 |
| BspDI | ATCGAT | 1 cut(s) | 749 |
| BspFNI | CGCG | 1 cut(s) | 56 |
| BspHI | TCATGA | 1 cut(s) | 1948 |
| BspLI | GGNNCC | 5 cut(s) | 262, 1207, 1933, 2051, 2232 |
| BspMAI | CTGCAG | 2 cut(s) | 73, 931 |
| BspMI | ACCTGC | 1 cut(s) | 2242 |
| BspPI | GGATC | 3 cut(s) | 120, 247, 1891 |
| BspT107I | GGYRCC | 2 cut(s) | 1205, 2230 |
| BspTNI | GGTCTC | 1 cut(s) | 423 |
| BsrDI | GCAATG | 2 cut(s) | 481, 2195 |
| BsrI | ACTGG | 4 cut(s) | 395, 1245, 1296, 1414 |
| BssECI | CCNNGG | 3 cut(s) | 141, 165, 1565 |
| BssMI | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| BssNI | GRCGYC | 1 cut(s) | 303 |
| BssSI | CACGAG | 2 cut(s) | 1380, 2123 |
| Bst2BI | CACGAG | 2 cut(s) | 1380, 2123 |
| Bst2UI | CCWGG | 5 cut(s) | 234, 513, 705, 1249, 2020 |
| Bst4CI | ACNGT | 6 cut(s) | 377, 487, 1863, 2178, 2244, 2250 |
| BstACI | GRCGYC | 1 cut(s) | 303 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 217, 905, 2206 |
| BstBAI | YACGTR | 1 cut(s) | 412 |
| BstC8I | GCNNGC | 3 cut(s) | 1131, 1254, 2147 |
| BstDSI | CCRYGG | 2 cut(s) | 165, 1565 |
| BstEII | GGTNACC | 1 cut(s) | 1385 |
| BstF5I | GGATG | 8 cut(s) | 10, 81, 288, 968, 1056, 1244, 1300, 1517 |
| BstFNI | CGCG | 1 cut(s) | 56 |
| BstH2I | RGCGCY | 3 cut(s) | 77, 117, 2035 |
| BstHHI | GCGC | 5 cut(s) | 76, 116, 735, 1516, 2034 |
| BstKTI | GATC | 9 cut(s) | 128, 242, 790, 1198, 1540, 1899, 1909, 1948, 2271 |
| BstMAI | GTCTC | 6 cut(s) | 423, 983, 989, 1593, 1697, 2017 |
| BstMBI | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| BstNI | CCWGG | 5 cut(s) | 234, 513, 705, 1249, 2020 |
| BstNSI | RCATGY | 2 cut(s) | 1161, 2149 |
| BstPI | GGTNACC | 1 cut(s) | 1385 |
| BstSCI | CCNGG | 6 cut(s) | 140, 232, 511, 703, 1247, 2018 |
| BstSFI | CTRYAG | 2 cut(s) | 69, 927 |
| BstSLI | GKGCMC | 1 cut(s) | 2124 |
| BstUI | CGCG | 1 cut(s) | 56 |
| BstV2I | GAAGAC | 2 cut(s) | 185, 840 |
| BstX2I | RGATCY | 2 cut(s) | 125, 1896 |
| BstYI | RGATCY | 2 cut(s) | 125, 1896 |
| Bsu15I | ATCGAT | 1 cut(s) | 749 |
| BsuI | GTATCC | 1 cut(s) | 39 |
| BsuRI | GGCC | 7 cut(s) | 9, 232, 351, 511, 2018, 2050, 2098 |
| BsuTUI | ATCGAT | 1 cut(s) | 749 |
| BtgI | CCRYGG | 2 cut(s) | 165, 1565 |
| BtrI | CACGTC | 1 cut(s) | 1954 |
| BtsCI | GGATG | 8 cut(s) | 10, 81, 288, 968, 1056, 1244, 1300, 1517 |
| BtsI | GCAGTG | 3 cut(s) | 135, 1030, 1798 |
| BtsIMutI | CAGTG | 7 cut(s) | 39, 135, 1030, 1083, 1098, 1238, 1798 |
| BveI | ACCTGC | 1 cut(s) | 2242 |
| Cac8I | GCNNGC | 3 cut(s) | 1131, 1254, 2147 |
| CaiI | CAGNNNCTG | 3 cut(s) | 68, 986, 1351 |
| CciI | TCATGA | 1 cut(s) | 1948 |
| CfoI | GCGC | 5 cut(s) | 76, 116, 735, 1516, 2034 |
| Cfr13I | GGNCC | 4 cut(s) | 260, 349, 509, 2049 |
| ClaI | ATCGAT | 1 cut(s) | 749 |
| CseI | GACGC | 3 cut(s) | 18, 305, 311 |
| Csp6I | GTAC | 4 cut(s) | 87, 649, 1607, 2231 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1363, 1398, 1623, 1658 |
| CviQI | GTAC | 4 cut(s) | 87, 649, 1607, 2231 |
| DpnI | GATC | 9 cut(s) | 127, 241, 789, 1197, 1539, 1898, 1908, 1947, 2270 |
| DpnII | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| DraI | TTTAAA | 1 cut(s) | 1665 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 367 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 367 |
| EciI | GGCGGA | 3 cut(s) | 335, 341, 650 |
| Ecl136II | GAGCTC | 1 cut(s) | 1732 |
| Eco147I | AGGCCT | 1 cut(s) | 2098 |
| Eco24I | GRGCYC | 2 cut(s) | 1275, 1734 |
| Eco31I | GGTCTC | 1 cut(s) | 423 |
| Eco32I | GATATC | 1 cut(s) | 887 |
| Eco47I | GGWCC | 1 cut(s) | 260 |
| Eco47III | AGCGCT | 1 cut(s) | 75 |
| Eco53kI | GAGCTC | 1 cut(s) | 1732 |
| Eco57I | CTGAAG | 3 cut(s) | 1035, 1377, 1770 |
| Eco72I | CACGTG | 1 cut(s) | 412 |
| Eco88I | CYCGRG | 1 cut(s) | 607 |
| Eco91I | GGTNACC | 1 cut(s) | 1385 |
| EcoICRI | GAGCTC | 1 cut(s) | 1732 |
| EcoO65I | GGTNACC | 1 cut(s) | 1385 |
| EcoRI | GAATTC | 1 cut(s) | 1957 |
| EcoRII | CCWGG | 5 cut(s) | 232, 511, 703, 1247, 2018 |
| EcoRV | GATATC | 1 cut(s) | 887 |
| EcoT22I | ATGCAT | 1 cut(s) | 2211 |
| EcoT38I | GRGCYC | 2 cut(s) | 1275, 1734 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 200, 232 |
| FaqI | GGGAC | 2 cut(s) | 293, 1302 |
| FauI | CCCGC | 1 cut(s) | 61 |
| FauNDI | CATATG | 1 cut(s) | 2205 |
| FbaI | TGATCA | 2 cut(s) | 1537, 2268 |
| FblI | GTMKAC | 1 cut(s) | 147 |
| FokI | GGATG | 8 cut(s) | 17, 68, 295, 955, 1063, 1231, 1307, 1504 |
| FriOI | GRGCYC | 2 cut(s) | 1275, 1734 |
| FspBI | CTAG | 1 cut(s) | 827 |
| GlaI | GCGC | 5 cut(s) | 75, 115, 734, 1515, 2033 |
| GsuI | CTGGAG | 1 cut(s) | 255 |
| HaeII | RGCGCY | 3 cut(s) | 77, 117, 2035 |
| HaeIII | GGCC | 7 cut(s) | 9, 232, 351, 511, 2018, 2050, 2098 |
| HapII | CCGG | 1 cut(s) | 141 |
| HgaI | GACGC | 3 cut(s) | 18, 305, 311 |
| HhaI | GCGC | 5 cut(s) | 76, 116, 735, 1516, 2034 |
| Hin1I | GRCGYC | 1 cut(s) | 303 |
| Hin6I | GCGC | 5 cut(s) | 74, 114, 733, 1514, 2032 |
| HinP1I | GCGC | 5 cut(s) | 74, 114, 733, 1514, 2032 |
| HindIII | AAGCTT | 1 cut(s) | 1429 |
| HpaII | CCGG | 1 cut(s) | 141 |
| HphI | GGTGA | 7 cut(s) | 1002, 1158, 1397, 1547, 1766, 1872, 1996 |
| Hpy166II | GTNNAC | 3 cut(s) | 148, 156, 260 |
| Hpy188III | TCNNGA | 8 cut(s) | 243, 290, 397, 607, 809, 1735, 1949, 1979 |
| Hpy8I | GTNNAC | 3 cut(s) | 148, 156, 260 |
| Hpy99I | CGWCG | 4 cut(s) | 296, 299, 503, 566 |
| HpyCH4III | ACNGT | 6 cut(s) | 377, 487, 1863, 2178, 2244, 2250 |
| HpyCH4IV | ACGT | 4 cut(s) | 411, 1038, 1589, 1953 |
| HpySE526I | ACGT | 4 cut(s) | 411, 1038, 1589, 1953 |
| Hsp92I | GRCGYC | 1 cut(s) | 303 |
| HspAI | GCGC | 5 cut(s) | 74, 114, 733, 1514, 2032 |
| KpnI | GGTACC | 1 cut(s) | 2234 |
| Ksp22I | TGATCA | 2 cut(s) | 1537, 2268 |
| Kzo9I | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| LmnI | GCTCC | 6 cut(s) | 495, 868, 957, 1729, 1737, 1854 |
| LweI | GCATC | 9 cut(s) | 273, 562, 838, 908, 1253, 1338, 1816, 1825, 2114 |
| MaeI | CTAG | 1 cut(s) | 827 |
| MaeII | ACGT | 4 cut(s) | 411, 1038, 1589, 1953 |
| MaeIII | GTNAC | 6 cut(s) | 494, 739, 1034, 1093, 1385, 2244 |
| MalI | GATC | 9 cut(s) | 127, 241, 789, 1197, 1539, 1898, 1908, 1947, 2270 |
| MboI | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| MflI | RGATCY | 2 cut(s) | 125, 1896 |
| MhlI | GDGCHC | 4 cut(s) | 492, 1275, 1734, 2124 |
| MluCI | AATT | 7 cut(s) | 402, 804, 1150, 1479, 1627, 1757, 1957 |
| MlyI | GAGTC | 4 cut(s) | 377, 1082, 1579, 2174 |
| MmeI | TCCRAC | 1 cut(s) | 351 |
| Mph1103I | ATGCAT | 1 cut(s) | 2211 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2177 |
| MseI | TTAA | 7 cut(s) | 1044, 1073, 1148, 1664, 1874, 1967, 2001 |
| MslI | CAYNNNNRTG | 1 cut(s) | 973 |
| MspA1I | CMGCKG | 4 cut(s) | 65, 578, 800, 1100 |
| MspI | CCGG | 1 cut(s) | 141 |
| MspR9I | CCNGG | 6 cut(s) | 142, 234, 513, 705, 1249, 2020 |
| Mva1269I | GAATGC | 3 cut(s) | 943, 1414, 1616 |
| MvaI | CCWGG | 5 cut(s) | 234, 513, 705, 1249, 2020 |
| MvnI | CGCG | 1 cut(s) | 56 |
| NciI | CCSGG | 1 cut(s) | 142 |
| NdeI | CATATG | 1 cut(s) | 2205 |
| NdeII | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| NlaIV | GGNNCC | 5 cut(s) | 262, 1207, 1933, 2051, 2232 |
| NmuCI | GTSAC | 4 cut(s) | 494, 1034, 1093, 1385 |
| NsiI | ATGCAT | 1 cut(s) | 2211 |
| NspI | RCATGY | 2 cut(s) | 1161, 2149 |
| PaeI | GCATGC | 1 cut(s) | 2149 |
| PaeR7I | CTCGAG | 1 cut(s) | 607 |
| PagI | TCATGA | 1 cut(s) | 1948 |
| PceI | AGGCCT | 1 cut(s) | 2098 |
| PciI | ACATGT | 1 cut(s) | 1157 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 303 |
| PctI | GAATGC | 3 cut(s) | 943, 1414, 1616 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2177 |
| PfeI | GAWTC | 6 cut(s) | 599, 1212, 1235, 1681, 1738, 1987 |
| PflFI | GACNNNGTC | 1 cut(s) | 305 |
| PleI | GAGTC | 4 cut(s) | 376, 1082, 1578, 2173 |
| PmaCI | CACGTG | 1 cut(s) | 412 |
| PmlI | CACGTG | 1 cut(s) | 412 |
| PpsI | GAGTC | 4 cut(s) | 376, 1082, 1578, 2173 |
| Ppu21I | YACGTR | 1 cut(s) | 412 |
| PscI | ACATGT | 1 cut(s) | 1157 |
| Psp124BI | GAGCTC | 1 cut(s) | 1734 |
| Psp6I | CCWGG | 5 cut(s) | 232, 511, 703, 1247, 2018 |
| PspCI | CACGTG | 1 cut(s) | 412 |
| PspEI | GGTNACC | 1 cut(s) | 1385 |
| PspGI | CCWGG | 5 cut(s) | 232, 511, 703, 1247, 2018 |
| PspN4I | GGNNCC | 5 cut(s) | 262, 1207, 1933, 2051, 2232 |
| PspPI | GGNCC | 4 cut(s) | 260, 349, 509, 2049 |
| PstI | CTGCAG | 2 cut(s) | 73, 931 |
| PstNI | CAGNNNCTG | 3 cut(s) | 68, 986, 1351 |
| PsuI | RGATCY | 2 cut(s) | 125, 1896 |
| PsyI | GACNNNGTC | 1 cut(s) | 305 |
| PvuII | CAGCTG | 2 cut(s) | 800, 1100 |
| RsaI | GTAC | 4 cut(s) | 88, 650, 1608, 2232 |
| RsaNI | GTAC | 4 cut(s) | 87, 649, 1607, 2231 |
| RseI | CAYNNNNRTG | 1 cut(s) | 973 |
| SacI | GAGCTC | 1 cut(s) | 1734 |
| SaqAI | TTAA | 7 cut(s) | 1044, 1073, 1148, 1664, 1874, 1967, 2001 |
| Sau3AI | GATC | 9 cut(s) | 125, 239, 787, 1195, 1537, 1896, 1906, 1945, 2268 |
| Sau96I | GGNCC | 4 cut(s) | 260, 349, 509, 2049 |
| SchI | GAGTC | 4 cut(s) | 377, 1082, 1579, 2174 |
| ScrFI | CCNGG | 6 cut(s) | 142, 234, 513, 705, 1249, 2020 |
| SduI | GDGCHC | 4 cut(s) | 492, 1275, 1734, 2124 |
| SfaNI | GCATC | 9 cut(s) | 273, 562, 838, 908, 1253, 1338, 1816, 1825, 2114 |
| SfcI | CTRYAG | 2 cut(s) | 69, 927 |
| Sfr274I | CTCGAG | 1 cut(s) | 607 |
| SinI | GGWCC | 1 cut(s) | 260 |
| SlaI | CTCGAG | 1 cut(s) | 607 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 973 |
| SmlI | CTYRAG | 3 cut(s) | 607, 1655, 1892 |
| SmoI | CTYRAG | 3 cut(s) | 607, 1655, 1892 |
| SphI | GCATGC | 1 cut(s) | 2149 |
| Sse9I | AATT | 7 cut(s) | 402, 804, 1150, 1479, 1627, 1757, 1957 |
| SseBI | AGGCCT | 1 cut(s) | 2098 |
| SspMI | CTAG | 1 cut(s) | 827 |
| SstI | GAGCTC | 1 cut(s) | 1734 |
| StuI | AGGCCT | 1 cut(s) | 2098 |
| StyD4I | CCNGG | 6 cut(s) | 140, 232, 511, 703, 1247, 2018 |
| TaaI | ACNGT | 6 cut(s) | 377, 487, 1863, 2178, 2244, 2250 |
| TaiI | ACGT | 4 cut(s) | 414, 1041, 1592, 1956 |
| TaqI | TCGA | 6 cut(s) | 78, 291, 315, 608, 749, 889 |
| TaqII | GACCGA | 1 cut(s) | 1899 |
| TasI | AATT | 7 cut(s) | 402, 804, 1150, 1479, 1627, 1757, 1957 |
| TauI | GCSGC | 4 cut(s) | 68, 581, 584, 2037 |
| TfiI | GAWTC | 6 cut(s) | 599, 1212, 1235, 1681, 1738, 1987 |
| Tru1I | TTAA | 7 cut(s) | 1044, 1073, 1148, 1664, 1874, 1967, 2001 |
| Tru9I | TTAA | 7 cut(s) | 1044, 1073, 1148, 1664, 1874, 1967, 2001 |
| TscAI | CASTG | 7 cut(s) | 39, 142, 1030, 1090, 1098, 1245, 1798 |
| TseFI | GTSAC | 4 cut(s) | 494, 1034, 1093, 1385 |
| Tsp45I | GTSAC | 4 cut(s) | 494, 1034, 1093, 1385 |
| TspDTI | ATGAA | 7 cut(s) | 735, 1067, 1152, 1356, 1476, 1767, 1950 |
| TspGWI | ACGGA | 6 cut(s) | 74, 482, 516, 897, 1582, 1806 |
| TspRI | CASTG | 7 cut(s) | 39, 142, 1030, 1090, 1098, 1245, 1798 |
| Tth111I | GACNNNGTC | 1 cut(s) | 305 |
| VpaK11BI | GGWCC | 1 cut(s) | 260 |
| XapI | RAATTY | 5 cut(s) | 402, 804, 1150, 1757, 1957 |
| XceI | RCATGY | 2 cut(s) | 1161, 2149 |
| XhoI | CTCGAG | 1 cut(s) | 607 |
| XmiI | GTMKAC | 1 cut(s) | 147 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2177 |
| XspI | CTAG | 1 cut(s) | 827 |
| Zsp2I | ATGCAT | 1 cut(s) | 2211 |