Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0002990

Physical Location & Seq

Genomic Coordinates Reverse (-)

10072327 .. 10077583

Gene Structure 5257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g09080.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4107 bp

ATGTTCGAGTGGCTTTTAGATTTCTGTGTGAACGATCCTTGTGATGGAGTTGCAAATGAAAGTTGGATTGCAGGAGTTAGTCCATGTTTGCAAACTTCATTGAAGTGGATTGGGACTGCAAACTTGTCATTTGTTTGCTCTGTATTTTTCCTCTGTGAGTGGGCAACATGTGATTTCAGGGATTTTACGACTGCCCCACCTTGTGAGCTGAAATTTACCGGCAGAAAGGATTTCTCTCAGGTATTTGTTGTTACTCGGCTTTTGAAGCTAAAGATGAGAGATTTGCAACTTTCACCTCAACGTAAGAATGATAGCATCCCTGGAGTCAGTAGTGTTGCAAAAGGTTCTACCCAGCAGAACAATTTTCCTGTCAGAGTTTCCATGGGAAATTCCTGTGAAGTTAAACCAAAAAATGTTGATCAAAGAAGTATGAAATCATCAAATATATTTGAGAGCCCTGGTCCTTTACACGATATCATAGTGTGTTGGATCGATCAACATGAAGCAGGCAAAGGAGAAGGTTTCAAGCGGCTTCAACTACTTGTAATCGAACTTATCCGGTCTGGTATTTTTAATCCTCATGCCTATGTTAGGCAACTGATAGTTAGTGGAATTATGGATATGAATGGAACGGGGTTTGAAGTCGACCGTTGGAATAGGCATTTTCGTATCTTGAAGCTGTTGCCTGCGCACTTTATGCGCGATGCTTTGGAAGAAGCAGGGACTGCTGAAGGGCCACAGCTTTCAGAGGCCATGAACTTCTACTCAACTGAGCGCCGCCTAATACTTAGTGGGCTTCTCTCCAATCAAAATAAAAATGTGAATATGAATGTGTCTGTTCTGAAGCAAAAGCATTATCCCATTCTTGGAAAAGATGGTGGTTTGCCAGTTTCTGTGGATCGATGGAAGGCTGTTCAGCCATCACCCAATGTATTGTCTGGCAAAAGTAGCAAGACTGATGTTGATGTCGAAGAACTAAAGGAAGCAATATCAGTTCTGTTGCAACTCCCAAGTAGTTCATCCCCAACGACAGAAACAGGGCTTGATGAATCCCAAGGAAGTGTTAAGAGGCCATTTGGGTCAACCTTTAACAAGATGGATCTAGGAGAAGGCACCCCTGGGTGTGAAGAATGCAGAAGAGCAAAGAGGCAAAAAGTGAGCGATGAAAGGGGCTCATGCATCCAAGGAAATTCTCCTATTCCCTCAGATGATGAAGATGCCTGGTGGATGCGGAAGAGACCTAAGTCCTTGGAGCCATTGAAGGTTGATCCACCCAATAAATCTACCAAACAGGTCTCTAGGAACCGGCAGAAGATAGTTCGTAAAACTCAAAGCCTTGCTCAACTTGCAGCTGCTAGGATTGAAGGTAGCCAGGGAGCATCTACAAGTCATGTCTGCAATAATAAAGTAAGCTGTCCTCATCATAAAAGTGGAGTTGAGGGGGAAATCCCGAAGTTTGTAGATCCAACCAAAATGAACCATGGTGGGGATATTGTTTCAATTGGAAAAGCTTTAAAGCGGCTGCGATTTGTAGAGAAGAGGACAATTACGGTTTGGTTGATGACTGTTATTAGGCAGCTTGTTGAAGAGACTGAAAAGACCATTGCGAAGGCTGGCCAATTTGGTAGGAATTTCACATCTGTTGATGATAGGAGCTCCATACGGTGGAAGCTTGGTGAAGATGAACTTGCTGCTGCACTGTATTTGATGGATGTTTCAAATGATTTAGTTTCAGCAGTCAAGTTTCTGCTTTGGTTGCTGCCAAAGGTTAATGGCCCCAGTTCTACAATCCATAGTGGGAGGAACATTATGCTGTTGCCAAGAAATGCTGAAAGTCAAGTGTGTGAAGTGGGGGAGGCATTTCTGGTATCATCACTCCGAAGGTATGAGAACATACTTGTTGCTACAGATCTTATTCCAGAAGTCTTGTCAGTTACAATGCACCGTGCTTCAGCCATAGTGGCACCTAATGGAAGAGTTTCAGGTTCAGCTGCCTTAGCATACAGTCGTTATTTATTGAAGCGATACAGCAATGTAGCTAGTGTCATTGAATGGGAAAAGAATTTCAAGCCAACATGTGATAAGAGACTTCTTTCTGAACTTGAGTCTGGACAGTCAGTGGATGGAGAGTTGGGGTTTCCGCTTGGTGTTCCAGCAGGAGTCGAAGATCTTGATGATTTTTTCCGCCAAAAGATTAGTGGTGTTCGGTTATCCAGGGTGGGAATGAACATGAAAGAAATAGTGCAACGAAATGTGAATGTTGACGATGCCTTTCAGTATTTTTTTGGGAAAGAGAGAAAGCTCTTTGCTGCTGGTGCTCCTAAAGGCTCTCCTGTTGATAAATGGGATGACGGATGTCAGATATCTCAAAAAGTAATTACAGAACTGATGGACTGCATTAGGCAGACTGGTGGTGCTGCTCAAGAAGGGGATCCATCTTTGGTGTCTTCTGCCGTTTCTGCTATTGTGGGTAATGTAGGGCTAATTATAGCAAAGATTCCAGATTTTAGAGCGGGGGGTAGCTATTCAACCTTTCCATCTGCCACCGATTCCTTGAACTTCGCTAGGCGTATTTTGCGTATCCATATAAGTTGCCTATGCCTCCTTAAGGAAGCTCTTGGAGAGCGCCAAACCCGTGTATTTGAGGTAGCTCTTGCGACAGAAGCTTGTTCTGCTCTTGTTCCTGGAAAGGCCTCTCGAAATCAATATCAATCCTCTCCTGAATCCCATGATTCCAACACTAACATGTCTAATGACATTTTGAACAGTAAAGTAGTTCTTGGGAGGACAACAAAAGTTGCAGCTGCTGTTTCTGCACTAATCATCGGGGCGGTTGTTCAAGGGGTTACTAGCTTGGAGAGATTGGTGACTGTATTCAGGTTAAAGGAAAGGTTGGATGTAATTCAATTTGTAAGGAGTAGTAGATCCAACTCTAATGGCAATGCTCGTTCTGCTGGGGCATTTAAGGGTGATAACTCGCTTGAAGCTTATGTGCATTGGTTTAGACTTCTCGTTGGAAACTGCAGAACAGTCTCTGATGGATTGGTCGTGGAACTGTTGGGTGAACCCTCTGTAGTAGCTCTTTCAAGGATGCAGCGTATGCTCCCTCTTGGTTTGGTTTTTCCACCTGCCTATTCTATATTTGCTTTTGTTATGTGGCGGCCATTCCTTCTTAGCACTATCTTTGCAGCGCGTGATGATTTTAACCAATCATATCAATCTTTAACAACAGCTATAGGTGATGCTATAAAGCACTCTCCTTTTCGTGATGTGTGTTTGAGAGATAGTCAGGGTTTCTATGATATTGTAGCTGCAGATGGCAGTGATGCTGAATTTGCAGCCATGCTAGAGTTAAATGGTTCAGACATGCATAAAAAATCCAGGGCTTTTGTTCCATTACGTGCAAGGCTTTTCCTAAATGCCATAATGGATTGTAAGATGCCACACTTTTCATTTACACAGGGTGAAGCAAATCAGGTCTCTGGACATGGTGAGTCTAAAGTTCAATTTGCAGAACATGAAACAAAGCTTGTAGATAAGCTTGTACATATTCTAGATACCCTGCAACCTGCAAAATTTCATTGGCAGTGGGTAGAGCTTAGGCTCCTTTTGAATGAACAGGCCCTTAATGAAAAACTTGGGACTCAAGATGCGTCTTTAGTGGATGCCATTCGGTTGTCCTCGCCTAGTCCTGAAAGGGCTGCTGCCTCCGAGAATGAGAAACACTTCATCGAGATCATCCTTACAAGGTTATTAGTTAGACCTGATGCGGCACCCCTTTTCTCGGATGTGGTTCATCTTTTTGGGAGGTCACTAGCAGATTCTATGTTGTTGCAGGTCAAATGGTTCCTGGGTGGCACAGATGTTCTTTATGGACGAAAAACAATTAGACAACGACTTCTTAATATTGCTGAGAGTAAACGTCTCTCAACTAAGACCCAATTTTGGAAGCCGTGGGGATGGTGTATTTATGATGTTGATCCTGTAACAAACAGGGGAGATAAGAGAAAGTTTGAAGTCACTTCCCTTGAAGAGGGTGAGATGGTTGAAGAGGGAACAGACTCAAAAAAGTATGGGAAAGGGGCCAGTCAAACGTCGGACATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016592 GO:0018130 GO:0019438 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0040034 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:0070013 GO:0071704 GO:0090213 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med12

Protein Analysis

1369

Amino Acids

151.67

Weight (kDa)

8.7

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00450 AT4G00450 AT4G00450
fragaria_vesca	FvH4_7g14270 FvH4_7g14270 FvH4_7g14270
malus_domestica	MD01G1060600.v1.1 MD07G1137100.v1.1
prunus_persica	Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1 Prupe.2G170500_v2.0.a1
pyrus_communis	pycom01g09080 pycom07g13490
rosa_chinensis	RchiOBHm_Chr1g0355261
rosa_laevigata	RLG00000028166
rosa_multiflora	Rmu_sc0003115.1_g000044
rosa_roxburghii	Rroxscaffold_4G00300550
rosa_rugosa	Rorug01G0245800 Rorug01G0245900 Rorug01G0246000 Rorug01G0246100 Rorug01G0246200 Rorug01G0246200 Rorug01G0246200
rosa_samantha	Rh1AG258300 Rh1BG227900 Rh1CG242000 Rh1DG255700
rosa_wichuraiana	Rw1G022800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3136
Acc16I	TGCGCA	1 cut(s)	690
Acc36I	ACCTGC	3 cut(s)	3136, 3577, 3826
AccB1I	GGYRCC	3 cut(s)	1112, 1963, 3772
AccB7I	CCANNNNNTGG	1 cut(s)	1665
AccBSI	CCGCTC	1 cut(s)	2513
AccI	GTMKAC	1 cut(s)	645
AccII	CGCG	2 cut(s)	702, 3193
AcoI	YGGCCR	2 cut(s)	1615, 3161
AcsI	RAATTY	7 cut(s)	212, 388, 1189, 1630, 2062, 3332, 3575
AcuI	CTGAAG	3 cut(s)	750, 863, 1935
AdeI	CACNNNGTG	2 cut(s)	203, 3464
AfaI	GTAC	1 cut(s)	3546
AfiI	CCNNNNNNNGG	9 cut(s)	44, 591, 866, 1486, 1665, 2608, 3784, 3945, 4033
AflII	CTTAAG	1 cut(s)	2606
AflIII	ACRYGT	3 cut(s)	167, 2075, 2745
AjnI	CCWGG	9 cut(s)	319, 457, 1117, 1220, 1371, 2213, 2683, 3380, 3849
Alw21I	GWGCWC	2 cut(s)	1658, 2320
Alw26I	GTCTC	7 cut(s)	1231, 1300, 1583, 2080, 3037, 3484, 3929
AlwNI	CAGNNNCTG	4 cut(s)	725, 893, 2807, 3035
AoxI	GGCC	9 cut(s)	734, 750, 1070, 1615, 1774, 2691, 3161, 3621, 4083
ApoI	RAATTY	7 cut(s)	212, 388, 1189, 1630, 2062, 3332, 3575
Asp700I	GAANNNNTTC	2 cut(s)	1978, 3725
AspLEI	GCGC	5 cut(s)	691, 702, 777, 2628, 3193
AspS9I	GGNCC	5 cut(s)	461, 734, 1775, 3622, 4083
AvaII	GGWCC	1 cut(s)	461
BalI	TGGCCA	1 cut(s)	1617
BamHI	GGATCC	1 cut(s)	2431
BanI	GGYRCC	3 cut(s)	1112, 1963, 3772
BanII	GRGCYC	3 cut(s)	458, 1175, 1658
BbsI	GAAGAC	1 cut(s)	2439
Bbv12I	GWGCWC	2 cut(s)	1658, 2320
BceAI	ACGGC	2 cut(s)	2438, 3937
BciT130I	CCWGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
BciVI	GTATCC	1 cut(s)	2591
BclI	TGATCA	1 cut(s)	418
BcoDI	GTCTC	7 cut(s)	1231, 1300, 1583, 2080, 3037, 3484, 3929
BfmI	CTRYAG	5 cut(s)	1905, 3022, 3072, 3234, 3312
BfoI	RGCGCY	2 cut(s)	778, 2629
BfrI	CTTAAG	1 cut(s)	2606
BfuAI	ACCTGC	3 cut(s)	3136, 3577, 3826
BfuI	GTATCC	1 cut(s)	2591
BglI	GCCNNNNNGGC	1 cut(s)	1961
BglII	AGATCT	2 cut(s)	1909, 2167
Bme1390I	CCNGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
Bme18I	GGWCC	1 cut(s)	461
BmgT120I	GGNCC	5 cut(s)	461, 734, 1775, 3622, 4083
BmrFI	CCNGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
BmrI	ACTGGG	1 cut(s)	1773
BmuI	ACTGGG	1 cut(s)	1773
BoxI	GACNNNNGTC	2 cut(s)	1243, 2355
BpiI	GAAGAC	1 cut(s)	2439
BpmI	CTGGAG	1 cut(s)	342
Bpu10I	CCTNAGC	2 cut(s)	1996, 3599
BpuEI	CTTGAG	3 cut(s)	2123, 2406, 3630
Bsa29I	ATCGAT	2 cut(s)	492, 901
BsaAI	YACGTR	1 cut(s)	3401
BsaBI	GATNNNNATC	1 cut(s)	3978
BsaI	GGTCTC	3 cut(s)	1231, 1300, 3484
BsaWI	WCCGGW	1 cut(s)	558
Bsc4I	CCNNNNNNNGG	9 cut(s)	44, 591, 866, 1486, 1665, 2608, 3784, 3945, 4033
Bse118I	RCCGGY	2 cut(s)	218, 1305
Bse1I	ACTGG	4 cut(s)	887, 1779, 2413, 4086
Bse3DI	GCAATG	3 cut(s)	1602, 2038, 2947
Bse8I	GATNNNNATC	1 cut(s)	3978
BseBI	CCWGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
BseCI	ATCGAT	2 cut(s)	492, 901
BseJI	GATNNNNATC	1 cut(s)	3978
BseLI	CCNNNNNNNGG	9 cut(s)	44, 591, 866, 1486, 1665, 2608, 3784, 3945, 4033
BseMI	GCAATG	3 cut(s)	1602, 2038, 2947
BseMII	CTCAG	4 cut(s)	251, 762, 1218, 3903
BseNI	ACTGG	4 cut(s)	887, 1779, 2413, 4086
BseYI	CCCAGC	2 cut(s)	351, 2954
BsgI	GTGCAG	2 cut(s)	1680, 2799
Bsh1236I	CGCG	2 cut(s)	702, 3193
Bsh1285I	CGRYCG	1 cut(s)	649
BshFI	GGCC	9 cut(s)	736, 752, 1072, 1617, 1776, 2693, 3163, 3623, 4085
BshNI	GGYRCC	3 cut(s)	1112, 1963, 3772
BshVI	ATCGAT	2 cut(s)	492, 901
BsiEI	CGRYCG	1 cut(s)	649
BsiHKAI	GWGCWC	2 cut(s)	1658, 2320
BsiSI	CCGG	3 cut(s)	219, 559, 1306
BslFI	GGGAC	3 cut(s)	127, 736, 3655
BslI	CCNNNNNNNGG	9 cut(s)	44, 591, 866, 1486, 1665, 2608, 3784, 3945, 4033
BsmAI	GTCTC	7 cut(s)	1231, 1300, 1583, 2080, 3037, 3484, 3929
BsmBI	CGTCTC	1 cut(s)	3929
BsmFI	GGGAC	3 cut(s)	127, 736, 3655
BsmI	GAATGC	1 cut(s)	1136
BsnI	GGCC	9 cut(s)	736, 752, 1072, 1617, 1776, 2693, 3163, 3623, 4085
Bso31I	GGTCTC	3 cut(s)	1231, 1300, 3484
Bsp1286I	GDGCHC	4 cut(s)	458, 1175, 1658, 2320
Bsp1407I	TGTACA	1 cut(s)	3544
Bsp19I	CCATGG	2 cut(s)	381, 1480
BspANI	GGCC	9 cut(s)	736, 752, 1072, 1617, 1776, 2693, 3163, 3623, 4085
BspCNI	CTCAG	4 cut(s)	250, 763, 1217, 3904
BspDI	ATCGAT	2 cut(s)	492, 901
BspFNI	CGCG	2 cut(s)	702, 3193
BspMAI	CTGCAG	2 cut(s)	3026, 3316
BspMI	ACCTGC	3 cut(s)	3136, 3577, 3826
BspQI	GCTCTTC	1 cut(s)	1132
BspT107I	GGYRCC	3 cut(s)	1112, 1963, 3772
BspTI	CTTAAG	1 cut(s)	2606
BspTNI	GGTCTC	3 cut(s)	1231, 1300, 3484
BsrBI	CCGCTC	1 cut(s)	2513
BsrDI	GCAATG	3 cut(s)	1602, 2038, 2947
BsrFI	RCCGGY	2 cut(s)	218, 1305
BsrGI	TGTACA	1 cut(s)	3544
BsrI	ACTGG	4 cut(s)	887, 1779, 2413, 4086
BssAI	RCCGGY	2 cut(s)	218, 1305
BssT1I	CCWWGG	5 cut(s)	381, 1054, 1183, 1248, 1480
Bst2UI	CCWGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
Bst6I	CTCTTC	7 cut(s)	1132, 1229, 1532, 1581, 1969, 4026, 4044
BstAFI	CTTAAG	1 cut(s)	2606
BstAPI	GCANNNNNTGC	3 cut(s)	697, 725, 3100
BstAUI	TGTACA	1 cut(s)	3544
BstBAI	YACGTR	1 cut(s)	3401
BstC8I	GCNNGC	3 cut(s)	508, 687, 1615
BstDSI	CCRYGG	3 cut(s)	381, 1480, 3953
BstENI	CCTNNNNNAGG	3 cut(s)	589, 2606, 4031
BstFNI	CGCG	2 cut(s)	702, 3193
BstH2I	RGCGCY	2 cut(s)	778, 2629
BstHHI	GCGC	5 cut(s)	691, 702, 777, 2628, 3193
BstMAI	GTCTC	7 cut(s)	1231, 1300, 1583, 2080, 3037, 3484, 3929
BstMCI	CGRYCG	1 cut(s)	649
BstNI	CCWGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
BstNSI	RCATGY	4 cut(s)	171, 2079, 2749, 3370
BstPAI	GACNNNNGTC	2 cut(s)	1243, 2355
BstSCI	CCNGG	9 cut(s)	319, 457, 1117, 1220, 1371, 2213, 2683, 3380, 3849
BstSFI	CTRYAG	5 cut(s)	1905, 3022, 3072, 3234, 3312
BstUI	CGCG	2 cut(s)	702, 3193
BstV2I	GAAGAC	1 cut(s)	2439
BstX2I	RGATCY	6 cut(s)	1099, 1462, 1909, 2167, 2431, 2924
BstYI	RGATCY	6 cut(s)	1099, 1462, 1909, 2167, 2431, 2924
Bsu15I	ATCGAT	2 cut(s)	492, 901
BsuI	GTATCC	1 cut(s)	2591
BsuRI	GGCC	9 cut(s)	736, 752, 1072, 1617, 1776, 2693, 3163, 3623, 4085
BsuTUI	ATCGAT	2 cut(s)	492, 901
BtgI	CCRYGG	3 cut(s)	381, 1480, 3953
BtgZI	GCGATG	2 cut(s)	717, 1176
BtsI	GCAGTG	2 cut(s)	3328, 3593
BtsIMutI	CAGTG	4 cut(s)	1697, 2124, 3328, 3593
BveI	ACCTGC	3 cut(s)	3136, 3577, 3826
Cac8I	GCNNGC	3 cut(s)	508, 687, 1615
CaiI	CAGNNNCTG	4 cut(s)	725, 893, 2807, 3035
CfoI	GCGC	5 cut(s)	691, 702, 777, 2628, 3193
Cfr10I	RCCGGY	2 cut(s)	218, 1305
Cfr13I	GGNCC	5 cut(s)	461, 734, 1775, 3622, 4083
ClaI	ATCGAT	2 cut(s)	492, 901
CseI	GACGC	1 cut(s)	3642
Csp6I	GTAC	1 cut(s)	3545
CviQI	GTAC	1 cut(s)	3545
DraI	TTTAAA	1 cut(s)	1515
DraIII	CACNNNGTG	2 cut(s)	203, 3464
EaeI	YGGCCR	2 cut(s)	1615, 3161
Eam1104I	CTCTTC	7 cut(s)	1132, 1229, 1532, 1581, 1969, 4026, 4044
EarI	CTCTTC	7 cut(s)	1132, 1229, 1532, 1581, 1969, 4026, 4044
EciI	GGCGGA	1 cut(s)	2174
Ecl136II	GAGCTC	1 cut(s)	1656
Eco130I	CCWWGG	5 cut(s)	381, 1054, 1183, 1248, 1480
Eco147I	AGGCCT	1 cut(s)	2693
Eco24I	GRGCYC	3 cut(s)	458, 1175, 1658
Eco31I	GGTCTC	3 cut(s)	1231, 1300, 3484
Eco32I	GATATC	2 cut(s)	475, 2364
Eco47I	GGWCC	1 cut(s)	461
Eco53kI	GAGCTC	1 cut(s)	1656
Eco57I	CTGAAG	3 cut(s)	750, 863, 1935
EcoICRI	GAGCTC	1 cut(s)	1656
EcoNI	CCTNNNNNAGG	3 cut(s)	589, 2606, 4031
EcoO109I	RGGNCCY	1 cut(s)	3622
EcoRII	CCWGG	9 cut(s)	319, 457, 1117, 1220, 1371, 2213, 2683, 3380, 3849
EcoRV	GATATC	2 cut(s)	475, 2364
EcoT14I	CCWWGG	5 cut(s)	381, 1054, 1183, 1248, 1480
EcoT22I	ATGCAT	2 cut(s)	1181, 3372
EcoT38I	GRGCYC	3 cut(s)	458, 1175, 1658
ErhI	CCWWGG	5 cut(s)	381, 1054, 1183, 1248, 1480
Esp3I	CGTCTC	1 cut(s)	3929
FalI	AAGNNNNNCTT	4 cut(s)	1671, 1703, 2763, 2795
FaqI	GGGAC	3 cut(s)	127, 736, 3655
FauI	CCCGC	1 cut(s)	2506
FbaI	TGATCA	1 cut(s)	418
FblI	GTMKAC	1 cut(s)	645
FriOI	GRGCYC	3 cut(s)	458, 1175, 1658
FspI	TGCGCA	1 cut(s)	690
GlaI	GCGC	5 cut(s)	690, 701, 776, 2627, 3192
GsaI	CCCAGC	2 cut(s)	355, 2958
GsuI	CTGGAG	1 cut(s)	342
HaeII	RGCGCY	2 cut(s)	778, 2629
HaeIII	GGCC	9 cut(s)	736, 752, 1072, 1617, 1776, 2693, 3163, 3623, 4085
HapII	CCGG	3 cut(s)	219, 559, 1306
HgaI	GACGC	1 cut(s)	3642
HhaI	GCGC	5 cut(s)	691, 702, 777, 2628, 3193
Hin6I	GCGC	5 cut(s)	689, 700, 775, 2626, 3191
HinP1I	GCGC	5 cut(s)	689, 700, 775, 2626, 3191
HincII	GTYRAC	3 cut(s)	646, 1083, 2263
HindII	GTYRAC	3 cut(s)	646, 1083, 2263
HindIII	AAGCTT	6 cut(s)	1509, 1670, 2664, 2985, 3527, 3539
HpaII	CCGG	3 cut(s)	219, 559, 1306
Hpy166II	GTNNAC	6 cut(s)	31, 646, 1083, 2263, 3065, 3920
Hpy8I	GTNNAC	6 cut(s)	31, 646, 1083, 2263, 3065, 3920
Hpy99I	CGWCG	1 cut(s)	4099
HpyCH4IV	ACGT	4 cut(s)	301, 3400, 3922, 4094
HpySE526I	ACGT	4 cut(s)	301, 3400, 3922, 4094
HspAI	GCGC	5 cut(s)	689, 700, 775, 2626, 3191
Ksp22I	TGATCA	1 cut(s)	418
LguI	GCTCTTC	1 cut(s)	1132
LmnI	GCTCC	7 cut(s)	1252, 1376, 1653, 1661, 2323, 3108, 3609
MaeII	ACGT	4 cut(s)	301, 3400, 3922, 4094
MaeIII	GTNAC	7 cut(s)	250, 1933, 2845, 2866, 3810, 3985, 4018
MbiI	CCGCTC	1 cut(s)	2513
MfeI	CAATTG	1 cut(s)	1500
MflI	RGATCY	6 cut(s)	1099, 1462, 1909, 2167, 2431, 2924
MhlI	GDGCHC	4 cut(s)	458, 1175, 1658, 2320
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
MlyI	GAGTC	6 cut(s)	333, 2114, 2169, 3503, 3637, 4055
MmeI	TCCRAC	9 cut(s)	44, 467, 632, 1490, 2760, 2874, 2952, 2995, 4077
Mox20I	TGGCCA	1 cut(s)	1617
Mph1103I	ATGCAT	2 cut(s)	1181, 3372
MroXI	GAANNNNTTC	2 cut(s)	1978, 3725
MscI	TGGCCA	1 cut(s)	1617
MslI	CAYNNNNRTG	4 cut(s)	103, 585, 1428, 2744
Msp20I	TGGCCA	1 cut(s)	1617
MspA1I	CMGCKG	3 cut(s)	1352, 1991, 2804
MspCI	CTTAAG	1 cut(s)	2606
MspI	CCGG	3 cut(s)	219, 559, 1306
MspR9I	CCNGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
MunI	CAATTG	1 cut(s)	1500
Mva1269I	GAATGC	1 cut(s)	1136
MvaI	CCWGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
MvnI	CGCG	2 cut(s)	702, 3193
NcoI	CCATGG	2 cut(s)	381, 1480
NmeAIII	GCCGAG	1 cut(s)	235
NmuCI	GTSAC	3 cut(s)	2866, 3810, 4018
NsbI	TGCGCA	1 cut(s)	690
NsiI	ATGCAT	2 cut(s)	1181, 3372
NspI	RCATGY	4 cut(s)	171, 2079, 2749, 3370
PaqCI	CACCTGC	1 cut(s)	3136
PasI	CCCWGGG	1 cut(s)	1118
PceI	AGGCCT	1 cut(s)	2693
PciI	ACATGT	3 cut(s)	167, 2075, 2745
PciSI	GCTCTTC	1 cut(s)	1132
PctI	GAATGC	1 cut(s)	1136
PdmI	GAANNNNTTC	2 cut(s)	1978, 3725
PfeI	GAWTC	6 cut(s)	1049, 2497, 2549, 2723, 2732, 3821
PflMI	CCANNNNNTGG	1 cut(s)	1665
PfoI	TCCNGGA	1 cut(s)	2683
PleI	GAGTC	6 cut(s)	332, 2113, 2168, 3502, 3637, 4055
PpsI	GAGTC	6 cut(s)	332, 2113, 2168, 3502, 3637, 4055
Ppu21I	YACGTR	1 cut(s)	3401
PscI	ACATGT	3 cut(s)	167, 2075, 2745
PshAI	GACNNNNGTC	2 cut(s)	1243, 2355
Psp124BI	GAGCTC	1 cut(s)	1658
Psp6I	CCWGG	9 cut(s)	319, 457, 1117, 1220, 1371, 2213, 2683, 3380, 3849
PspFI	CCCAGC	2 cut(s)	351, 2954
PspGI	CCWGG	9 cut(s)	319, 457, 1117, 1220, 1371, 2213, 2683, 3380, 3849
PspPI	GGNCC	5 cut(s)	461, 734, 1775, 3622, 4083
PstI	CTGCAG	2 cut(s)	3026, 3316
PstNI	CAGNNNCTG	4 cut(s)	725, 893, 2807, 3035
PsuI	RGATCY	6 cut(s)	1099, 1462, 1909, 2167, 2431, 2924
PvuII	CAGCTG	3 cut(s)	1352, 1991, 2804
RsaI	GTAC	1 cut(s)	3546
RsaNI	GTAC	1 cut(s)	3545
RseI	CAYNNNNRTG	4 cut(s)	103, 585, 1428, 2744
SacI	GAGCTC	1 cut(s)	1658
SalI	GTCGAC	1 cut(s)	644
SapI	GCTCTTC	1 cut(s)	1132
Sau96I	GGNCC	5 cut(s)	461, 734, 1775, 3622, 4083
SchI	GAGTC	6 cut(s)	333, 2114, 2169, 3503, 3637, 4055
ScrFI	CCNGG	9 cut(s)	321, 459, 1119, 1222, 1373, 2215, 2685, 3382, 3851
SduI	GDGCHC	4 cut(s)	458, 1175, 1658, 2320
SfcI	CTRYAG	5 cut(s)	1905, 3022, 3072, 3234, 3312
SinI	GGWCC	1 cut(s)	461
SmiMI	CAYNNNNRTG	4 cut(s)	103, 585, 1428, 2744
SmlI	CTYRAG	4 cut(s)	2102, 2421, 2606, 3645
SmoI	CTYRAG	4 cut(s)	2102, 2421, 2606, 3645
SseBI	AGGCCT	1 cut(s)	2693
SspI	AATATT	1 cut(s)	3907
SstI	GAGCTC	1 cut(s)	1658
StuI	AGGCCT	1 cut(s)	2693
StyD4I	CCNGG	9 cut(s)	319, 457, 1117, 1220, 1371, 2213, 2683, 3380, 3849
StyI	CCWWGG	5 cut(s)	381, 1054, 1183, 1248, 1480
TaiI	ACGT	4 cut(s)	304, 3403, 3925, 4097
TaqI	TCGA	9 cut(s)	6, 492, 549, 645, 901, 969, 2163, 2698, 3732
TatI	WGTACW	1 cut(s)	3544
TauI	GCSGC	5 cut(s)	532, 780, 1522, 3163, 3773
TfiI	GAWTC	6 cut(s)	1049, 2497, 2549, 2723, 2732, 3821
TscAI	CASTG	4 cut(s)	1704, 2124, 3328, 3593
TseFI	GTSAC	3 cut(s)	2866, 3810, 4018
Tsp45I	GTSAC	3 cut(s)	2866, 3810, 4018
TspGWI	ACGGA	1 cut(s)	2367
TspRI	CASTG	4 cut(s)	1704, 2124, 3328, 3593
Van91I	CCANNNNNTGG	1 cut(s)	1665
Vha464I	CTTAAG	1 cut(s)	2606
VpaK11BI	GGWCC	1 cut(s)	461
XagI	CCTNNNNNAGG	3 cut(s)	589, 2606, 4031
XapI	RAATTY	7 cut(s)	212, 388, 1189, 1630, 2062, 3332, 3575
XbaI	TCTAGA	1 cut(s)	3553
XceI	RCATGY	4 cut(s)	171, 2079, 2749, 3370
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2195
XmiI	GTMKAC	1 cut(s)	645
XmnI	GAANNNNTTC	2 cut(s)	1978, 3725
Zsp2I	ATGCAT	2 cut(s)	1181, 3372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.