Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0003930

Physical Location & Seq

Genomic Coordinates Reverse (-)

19198130 .. 19202135

Gene Structure 4006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g20920.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGAGAATCCCTAAGAGAGAGGGTCCTGATCCACCAGAAAGTGCACATTCCACACCTTCCAAGCTTTTCACTCAGAGAGAGAGAGAGAGAGAGAGAGAGGGACAGTGCGGCTCATACTCCGGCGGTGGTTTCCCGGAAAATCAGTCTCCGGCGATGGCGGACCAGAACTCCGAGGAATGGCTCCCAGCTGGATGGACGGTGGAGGTCAAAGTTAGAAAAAATGGCAGAAGAGACAAGTATTATTACGAATCCTCAAGTGGACATAGATTTAGTTCCAGGGCAGAGGTATCTCGCTATCTCAGCACCTCCAATACCAGTCATGAAGACAAACAGAAAATTGAGGAGACTCTCAAGCGACCTTCAGATGATGTTATAGTTGAGAAGACTGTAGCAGAAGGACTGCCTCCAGGATGGATCAAAGAAATCCGGATGACGAAAAAGGCTCGTAAGATTAGGAGAGATACGCATTATATTGCTCCTGTAAGTGAAAAAGTATTCCGCTCTCTCAGGGATGTGCATCGCTATCTTGAAAATGAGGAGCCAGGAAGGTTAAATGTCGATCCGAGTGGCAGCAGTGATAAGGAATTGGAAGATGAAAAATCCTCTAAATTAGACAACCCAAGTTTGAACTTCAACGAGACAACAAAGGATGGAGAGATACTTAATTGTTCATGTAACGGAGAAGGGCCGCCCCTTCCTGAACATACTTCTGATCAGAGTGAGGTGGGCACTGAATTAGGCAGCTTAAATCCTTCAGAAGCCAAAGGTTCGGAGCAAAATGAACAAGACGGTGATTCCACAAAAAGTGAATGTATTTCAGCTCCTGCTGGTGGAGACCCGCCAGATAATCAATGCCTGGAAAGCGGCATGATAAAACATGAAAGAAACCGTTCTGGCCTCTGCAAATCAAAGAACAAGAAAGAGCTTATCTTGCCTCGCCGTGCTTCAAAGCGACTAGCTGGAGTTGAAGTTGGTCCAGTTCCAGAACTGAAAACAAGTACTCGAGCCCGTCGAGCTGCAACTGAACAGTCAGGGGAGGGAGCGCGCCATACAACCGAAGGCCCGTCCCTTCCTGAACACAGTTCTGATCAGAGTGAGGTGGGCAGCTTAAATCCTCCAGAATCCAAAGGTTCAGAGCAAAAAGAACAGGACTGTGATTCCACAAAAAATGAATGTATTTCAGTTCCTGCAGGTGGAGGCCTGCCAGATAAGCAATGCCTGGAAACTGGTCTGATAAAACATGAAGGGAAAAAGACCCATCTCGACCTTTGCAAATCAAAGAACAAGGTGGAGCTTATCGTTCCTCGCCGTGCTTCAATGAGACTGGCTGGAGTTGAAGCTGGTCCAGTTCCAGAAGTGAAACCAAGTACTTCAGCACGTCGATATGCTGTTAAACAGTCAGGGGAGGGAGTACGCCATACAACTGAAGGTTCTTCCCCTGGTAATTTGCCTAGTTGTGCATTCCAGCAGCCTGATTATCATGAGGTTGAGCCAGAAAAGCATATTCAAAATGTGGAACAAGCAATTAATGGCGACGCTAAGCAAAGGTGTGCTTCTGTTTTCCCATTAGGGAGCCGAAGCAGCCCAGAAGAGCATGCAGGAAAACTTGAAACCGGTTATAAGGCTGAAGAGAAGCCAGGACTTCAACCAGATTTACCTCTCGGGGATTTCTTCACAGATCCTTGCATTGCATTTGCAATAGAGACTCTCACTGGAATAGGTTTTGACAATGCCAGGAGCGATGGTGACCATTCTTCAGGAGGACTAACTACACCAAAAGATCATCATGGGGACATAGACAATAAGAGCAGTGGGAAGCAGGAAGGCGGCAACCTTTTGATTCCAGAACAATGGGGGAAAGTTGGAAAGGATGATGATGCTGGACAGAAGTCAGGATCCCCTACTGAGTTGCCTTTTGGGGGTTCATGGCCCGATCCATGCATTGAATTTGCTATAAAAACTCTCACGGGTGCAATCCCATTAGACTACGATCCGCATATTGAGGAGTACTTTCAGCAGCAACTAAGCTCATCAAAAACTCAAGGAACTAGCGACTTGACCTTGAAAAATGTTGGTCTAGATAACTTCTGCCAAACGGATGATTTGTGCGAGCAGTTCTGTCATGCGGAGGTCCCTGTGCATAAGAAACAAGCGCTTTCTGAACCTCGACACACCAGGAGTGGAAGTTTACACAGTTCCAGTGGATCAGATGTAAACCAAAAGGGGAGGCAGAGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008327 GO:0036094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

747

Amino Acids

81.62

Weight (kDa)

5.69

Isoelectric Point (pI)

59.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003930)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52230 AT5G52230 AT5G52230
fragaria_vesca	FvH4_7g29290 FvH4_7g29290
malus_domestica	MD01G1199300.v1.1 MD07G1267200.v1.1
prunus_persica	Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1
pyrus_communis	pycom01g20920 pycom07g24480
rosa_chinensis	RchiOBHm_Chr1g0377031
rosa_laevigata	RLG00000026548
rosa_multiflora	Rmu_ssc0000155.1_g000022
rosa_roxburghii	Rroxscaffold_4G00281510
rosa_rugosa	Rorug01G0401000 Rorug01G0401100
rosa_samantha	Rh1AG418000 Rh1BG377300 Rh1CG391300 Rh1DG408000
rosa_wichuraiana	Rw1G036700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1620
AarI	CACCTGC	1 cut(s)	1181
Acc36I	ACCTGC	1 cut(s)	1181
AccBSI	CCGCTC	1 cut(s)	501
AccII	CGCG	1 cut(s)	1045
AccIII	TCCGGA	1 cut(s)	426
AclWI	GGATC	9 cut(s)	23, 422, 554, 1673, 1890, 1903, 1928, 1985, 2212
AcsI	RAATTY	1 cut(s)	1946
AcuI	CTGAAG	6 cut(s)	345, 738, 1356, 1446, 1647, 1740
AfaI	GTAC	4 cut(s)	1000, 1369, 1413, 2009
AfeI	AGCGCT	1 cut(s)	2154
AfiI	CCNNNNNNNGG	4 cut(s)	177, 830, 1193, 1919
AgeI	ACCGGT	1 cut(s)	1613
AjiI	CACGTC	1 cut(s)	1379
AjnI	CCWGG	9 cut(s)	275, 406, 541, 855, 1218, 1438, 1636, 1733, 2174
Alw21I	GWGCWC	1 cut(s)	46
Alw26I	GTCTC	8 cut(s)	150, 225, 338, 632, 828, 1315, 1697, 2227
Alw44I	GTGCAC	1 cut(s)	42
AlwI	GGATC	9 cut(s)	23, 422, 554, 1673, 1890, 1903, 1928, 1985, 2212
AlwNI	CAGNNNCTG	2 cut(s)	824, 1187
Ama87I	CYCGRG	2 cut(s)	1002, 1661
Aor13HI	TCCGGA	1 cut(s)	426
Aor51HI	AGCGCT	1 cut(s)	2154
AoxI	GGCC	5 cut(s)	686, 895, 1060, 1198, 1928
ApaLI	GTGCAC	1 cut(s)	42
ApeKI	GCWGC	7 cut(s)	570, 741, 1016, 1104, 1468, 1581, 2017
ApoI	RAATTY	1 cut(s)	1946
AseI	ATTAAT	1 cut(s)	1527
AsiGI	ACCGGT	1 cut(s)	1613
Asp700I	GAANNNNTTC	1 cut(s)	889
AspLEI	GCGC	3 cut(s)	1045, 1047, 2155
AspS9I	GGNCC	8 cut(s)	23, 160, 686, 974, 1061, 1343, 1929, 2131
AsuC2I	CCSGG	1 cut(s)	134
AsuHPI	GGTGA	2 cut(s)	803, 1757
AvaI	CYCGRG	2 cut(s)	1002, 1661
AvaII	GGWCC	5 cut(s)	23, 160, 974, 1343, 2131
BaeGI	GKGCMC	2 cut(s)	46, 731
BamHI	GGATCC	1 cut(s)	1895
BanII	GRGCYC	1 cut(s)	1009
BbsI	GAAGAC	2 cut(s)	330, 389
Bbv12I	GWGCWC	1 cut(s)	46
BbvI	GCAGC	7 cut(s)	582, 753, 1003, 1116, 1480, 1593, 2029
BccI	CCATC	6 cut(s)	148, 186, 405, 644, 1266, 1736
BceAI	ACGGC	2 cut(s)	924, 1293
BciT130I	CCWGG	9 cut(s)	277, 408, 543, 857, 1220, 1440, 1638, 1735, 2176
BclI	TGATCA	2 cut(s)	712, 1087
BcnI	CCSGG	1 cut(s)	134
BcoDI	GTCTC	8 cut(s)	150, 225, 338, 632, 828, 1315, 1697, 2227
BfaI	CTAG	4 cut(s)	956, 1452, 2049, 2078
BfmI	CTRYAG	2 cut(s)	387, 1188
BfoI	RGCGCY	1 cut(s)	2156
BfuAI	ACCTGC	1 cut(s)	1181
BlpI	GCTNAGC	1 cut(s)	1539
BmcAI	AGTACT	3 cut(s)	1000, 1369, 2009
Bme18I	GGWCC	5 cut(s)	23, 160, 974, 1343, 2131
BmeT110I	CYCGRG	2 cut(s)	1002, 1661
BmgBI	CACGTC	1 cut(s)	1379
BmgT120I	GGNCC	8 cut(s)	23, 160, 686, 974, 1061, 1343, 1929, 2131
BmiI	GGNNCC	6 cut(s)	24, 182, 540, 1574, 1897, 2133
BmsI	GCATC	2 cut(s)	526, 1867
BoxI	GACNNNNGTC	1 cut(s)	1888
BpiI	GAAGAC	2 cut(s)	330, 389
BpmI	CTGGAG	4 cut(s)	390, 981, 1101, 1350
Bpu1102I	GCTNAGC	1 cut(s)	1539
BpuEI	CTTGAG	3 cut(s)	238, 335, 2025
BpuMI	CCSGG	1 cut(s)	134
BsaBI	GATNNNNATC	1 cut(s)	516
BsaI	GGTCTC	1 cut(s)	828
BsaJI	CCNNGG	3 cut(s)	171, 276, 1438
BsaWI	WCCGGW	2 cut(s)	426, 1613
BsaXI	ACNNNNNCTCC	8 cut(s)	152, 182, 954, 984, 1729, 1759, 2170, 2200
Bsc4I	CCNNNNNNNGG	4 cut(s)	177, 830, 1193, 1919
Bse118I	RCCGGY	1 cut(s)	1613
Bse1I	ACTGG	7 cut(s)	315, 977, 1231, 1329, 1346, 1717, 2199
Bse3DI	GCAATG	2 cut(s)	1220, 1686
Bse8I	GATNNNNATC	1 cut(s)	516
BseAI	TCCGGA	1 cut(s)	426
BseBI	CCWGG	9 cut(s)	277, 408, 543, 857, 1220, 1440, 1638, 1735, 2176
BseDI	CCNNGG	3 cut(s)	171, 276, 1438
BseGI	GGATG	7 cut(s)	197, 416, 435, 517, 655, 1876, 2104
BseJI	GATNNNNATC	1 cut(s)	516
BseLI	CCNNNNNNNGG	4 cut(s)	177, 830, 1193, 1919
BseMI	GCAATG	2 cut(s)	1220, 1686
BseMII	CTCAG	4 cut(s)	86, 313, 520, 1896
BseNI	ACTGG	7 cut(s)	315, 977, 1231, 1329, 1346, 1717, 2199
BsePI	GCGCGC	1 cut(s)	1043
BseRI	GAGGAG	3 cut(s)	356, 551, 2018
BseSI	GKGCMC	2 cut(s)	46, 731
BseXI	GCAGC	7 cut(s)	582, 753, 1003, 1116, 1480, 1593, 2029
BseYI	CCCAGC	1 cut(s)	184
Bsh1236I	CGCG	1 cut(s)	1045
BshFI	GGCC	5 cut(s)	688, 897, 1062, 1200, 1930
BshTI	ACCGGT	1 cut(s)	1613
BsiHKAI	GWGCWC	1 cut(s)	46
BsiHKCI	CYCGRG	2 cut(s)	1002, 1661
BsiSI	CCGG	5 cut(s)	120, 134, 149, 427, 1614
BslFI	GGGAC	4 cut(s)	114, 1051, 1805, 2117
BslI	CCNNNNNNNGG	4 cut(s)	177, 830, 1193, 1919
BsmAI	GTCTC	8 cut(s)	150, 225, 338, 632, 828, 1315, 1697, 2227
BsmFI	GGGAC	4 cut(s)	114, 1051, 1805, 2117
BsmI	GAATGC	1 cut(s)	1460
BsnI	GGCC	5 cut(s)	688, 897, 1062, 1200, 1930
Bso31I	GGTCTC	1 cut(s)	828
BsoBI	CYCGRG	2 cut(s)	1002, 1661
Bsp1286I	GDGCHC	3 cut(s)	46, 731, 1009
Bsp13I	TCCGGA	1 cut(s)	426
Bsp1720I	GCTNAGC	1 cut(s)	1539
BspANI	GGCC	5 cut(s)	688, 897, 1062, 1200, 1930
BspCNI	CTCAG	4 cut(s)	85, 312, 519, 1897
BspEI	TCCGGA	1 cut(s)	426
BspFNI	CGCG	1 cut(s)	1045
BspHI	TCATGA	2 cut(s)	319, 1480
BspLI	GGNNCC	6 cut(s)	24, 182, 540, 1574, 1897, 2133
BspMAI	CTGCAG	1 cut(s)	1192
BspMI	ACCTGC	1 cut(s)	1181
BspPI	GGATC	9 cut(s)	23, 422, 554, 1673, 1890, 1903, 1928, 1985, 2212
BspQI	GCTCTTC	1 cut(s)	1584
BspTNI	GGTCTC	1 cut(s)	828
BsrBI	CCGCTC	1 cut(s)	501
BsrDI	GCAATG	2 cut(s)	1220, 1686
BsrFI	RCCGGY	1 cut(s)	1613
BsrI	ACTGG	7 cut(s)	315, 977, 1231, 1329, 1346, 1717, 2199
BssAI	RCCGGY	1 cut(s)	1613
BssECI	CCNNGG	3 cut(s)	171, 276, 1438
BssHII	GCGCGC	1 cut(s)	1043
Bst2UI	CCWGG	9 cut(s)	277, 408, 543, 857, 1220, 1440, 1638, 1735, 2176
Bst6I	CTCTTC	3 cut(s)	223, 1584, 1623
BstC8I	GCNNGC	4 cut(s)	1045, 1202, 1596, 2111
BstDEI	CTNAG	7 cut(s)	12, 72, 299, 506, 1539, 1905, 2024
BstEII	GGTNACC	1 cut(s)	1745
BstF5I	GGATG	7 cut(s)	197, 416, 435, 517, 655, 1876, 2104
BstFNI	CGCG	1 cut(s)	1045
BstH2I	RGCGCY	1 cut(s)	2156
BstHHI	GCGC	3 cut(s)	1045, 1047, 2155
BstMAI	GTCTC	8 cut(s)	150, 225, 338, 632, 828, 1315, 1697, 2227
BstMWI	GCNNNNNNNGC	7 cut(s)	300, 861, 931, 1013, 1210, 1498, 1581
BstNI	CCWGG	9 cut(s)	277, 408, 543, 857, 1220, 1440, 1638, 1735, 2176
BstNSI	RCATGY	1 cut(s)	1598
BstPAI	GACNNNNGTC	1 cut(s)	1888
BstPI	GGTNACC	1 cut(s)	1745
BstSFI	CTRYAG	2 cut(s)	387, 1188
BstSLI	GKGCMC	2 cut(s)	46, 731
BstUI	CGCG	1 cut(s)	1045
BstV1I	GCAGC	7 cut(s)	582, 753, 1003, 1116, 1480, 1593, 2029
BstV2I	GAAGAC	2 cut(s)	330, 389
BstX2I	RGATCY	2 cut(s)	1678, 1895
BstXI	CCANNNNNNTGG	2 cut(s)	192, 1851
BstYI	RGATCY	2 cut(s)	1678, 1895
BsuRI	GGCC	5 cut(s)	688, 897, 1062, 1200, 1930
BtgZI	GCGATG	3 cut(s)	167, 503, 1755
BtrI	CACGTC	1 cut(s)	1379
BtsCI	GGATG	7 cut(s)	197, 416, 435, 517, 655, 1876, 2104
BtsI	GCAGTG	2 cut(s)	580, 1816
BtsIMutI	CAGTG	7 cut(s)	110, 580, 729, 1710, 1816, 2206, 2236
BveI	ACCTGC	1 cut(s)	1181
Cac8I	GCNNGC	4 cut(s)	1045, 1202, 1596, 2111
CaiI	CAGNNNCTG	2 cut(s)	824, 1187
CciI	TCATGA	2 cut(s)	319, 1480
CfoI	GCGC	3 cut(s)	1045, 1047, 2155
Cfr10I	RCCGGY	1 cut(s)	1613
Cfr13I	GGNCC	8 cut(s)	23, 160, 686, 974, 1061, 1343, 1929, 2131
CseI	GACGC	1 cut(s)	1544
Csp6I	GTAC	4 cut(s)	999, 1368, 1412, 2008
CspAI	ACCGGT	1 cut(s)	1613
CviQI	GTAC	4 cut(s)	999, 1368, 1412, 2008
DdeI	CTNAG	7 cut(s)	12, 72, 299, 506, 1539, 1905, 2024
Eam1104I	CTCTTC	3 cut(s)	223, 1584, 1623
EarI	CTCTTC	3 cut(s)	223, 1584, 1623
EciI	GGCGGA	1 cut(s)	173
Eco147I	AGGCCT	1 cut(s)	1200
Eco24I	GRGCYC	1 cut(s)	1009
Eco31I	GGTCTC	1 cut(s)	828
Eco47I	GGWCC	5 cut(s)	23, 160, 974, 1343, 2131
Eco47III	AGCGCT	1 cut(s)	2154
Eco57I	CTGAAG	6 cut(s)	345, 738, 1356, 1446, 1647, 1740
Eco88I	CYCGRG	2 cut(s)	1002, 1661
Eco91I	GGTNACC	1 cut(s)	1745
EcoO109I	RGGNCCY	2 cut(s)	23, 2131
EcoO65I	GGTNACC	1 cut(s)	1745
EcoRII	CCWGG	9 cut(s)	275, 406, 541, 855, 1218, 1438, 1636, 1733, 2174
EcoT22I	ATGCAT	1 cut(s)	1943
EcoT38I	GRGCYC	1 cut(s)	1009
FalI	AAGNNNNNCTT	2 cut(s)	1537, 1569
FaqI	GGGAC	4 cut(s)	114, 1051, 1805, 2117
FauI	CCCGC	1 cut(s)	846
FbaI	TGATCA	2 cut(s)	712, 1087
FokI	GGATG	7 cut(s)	204, 423, 442, 524, 662, 1883, 2111
FriOI	GRGCYC	1 cut(s)	1009
FspBI	CTAG	4 cut(s)	956, 1452, 2049, 2078
GlaI	GCGC	3 cut(s)	1044, 1046, 2154
GsaI	CCCAGC	1 cut(s)	188
GsuI	CTGGAG	4 cut(s)	390, 981, 1101, 1350
HaeII	RGCGCY	1 cut(s)	2156
HaeIII	GGCC	5 cut(s)	688, 897, 1062, 1200, 1930
HapII	CCGG	5 cut(s)	120, 134, 149, 427, 1614
HgaI	GACGC	1 cut(s)	1544
HhaI	GCGC	3 cut(s)	1045, 1047, 2155
Hin6I	GCGC	3 cut(s)	1043, 1045, 2153
HinP1I	GCGC	3 cut(s)	1043, 1045, 2153
HindIII	AAGCTT	1 cut(s)	62
HinfI	GANTC	8 cut(s)	6, 248, 346, 794, 1121, 1157, 1705, 1840
HpaII	CCGG	5 cut(s)	120, 134, 149, 427, 1614
HphI	GGTGA	2 cut(s)	803, 1757
Hpy166II	GTNNAC	4 cut(s)	44, 260, 2189, 2215
Hpy8I	GTNNAC	4 cut(s)	44, 260, 2189, 2215
Hpy99I	CGWCG	3 cut(s)	1014, 1383, 1538
HpyCH4IV	ACGT	1 cut(s)	1378
HpyF10VI	GCNNNNNNNGC	7 cut(s)	300, 861, 931, 1013, 1210, 1498, 1581
HpyF3I	CTNAG	7 cut(s)	12, 72, 299, 506, 1539, 1905, 2024
HpySE526I	ACGT	1 cut(s)	1378
HspAI	GCGC	3 cut(s)	1043, 1045, 2153
Kpn2I	TCCGGA	1 cut(s)	426
Ksp22I	TGATCA	2 cut(s)	712, 1087
LguI	GCTCTTC	1 cut(s)	1584
LmnI	GCTCC	9 cut(s)	186, 481, 538, 772, 826, 1040, 1291, 1572, 1737
Lsp1109I	GCAGC	7 cut(s)	582, 753, 1003, 1116, 1480, 1593, 2029
LweI	GCATC	2 cut(s)	526, 1867
MaeI	CTAG	4 cut(s)	956, 1452, 2049, 2078
MaeII	ACGT	1 cut(s)	1378
MaeIII	GTNAC	2 cut(s)	674, 1745
MbiI	CCGCTC	1 cut(s)	501
MboII	GAAGA	9 cut(s)	240, 335, 394, 602, 1425, 1601, 1640, 1663, 1746
MflI	RGATCY	2 cut(s)	1678, 1895
MhlI	GDGCHC	3 cut(s)	46, 731, 1009
MluCI	AATT	8 cut(s)	336, 584, 608, 664, 734, 1444, 1524, 1946
MlyI	GAGTC	2 cut(s)	340, 1699
MmeI	TCCRAC	1 cut(s)	1843
Mph1103I	ATGCAT	1 cut(s)	1943
MroI	TCCGGA	1 cut(s)	426
MroXI	GAANNNNTTC	1 cut(s)	889
MseI	TTAA	6 cut(s)	551, 663, 746, 1109, 1392, 1527
MspA1I	CMGCKG	1 cut(s)	188
MspI	CCGG	5 cut(s)	120, 134, 149, 427, 1614
Mva1269I	GAATGC	1 cut(s)	1460
MvaI	CCWGG	9 cut(s)	277, 408, 543, 857, 1220, 1440, 1638, 1735, 2176
MvnI	CGCG	1 cut(s)	1045
MwoI	GCNNNNNNNGC	7 cut(s)	300, 861, 931, 1013, 1210, 1498, 1581
NciI	CCSGG	1 cut(s)	134
NlaIV	GGNNCC	6 cut(s)	24, 182, 540, 1574, 1897, 2133
NmuCI	GTSAC	1 cut(s)	1745
NsiI	ATGCAT	1 cut(s)	1943
NspI	RCATGY	1 cut(s)	1598
PaeI	GCATGC	1 cut(s)	1598
PaeR7I	CTCGAG	1 cut(s)	1002
PagI	TCATGA	2 cut(s)	319, 1480
PaqCI	CACCTGC	1 cut(s)	1181
PauI	GCGCGC	1 cut(s)	1043
PceI	AGGCCT	1 cut(s)	1200
PciSI	GCTCTTC	1 cut(s)	1584
PcsI	WCGNNNNNNNCGW	1 cut(s)	1009
PctI	GAATGC	1 cut(s)	1460
PdmI	GAANNNNTTC	1 cut(s)	889
PfeI	GAWTC	6 cut(s)	6, 248, 794, 1121, 1157, 1840
PfoI	TCCNGGA	2 cut(s)	132, 406
PinAI	ACCGGT	1 cut(s)	1613
PleI	GAGTC	2 cut(s)	340, 1699
PpsI	GAGTC	2 cut(s)	340, 1699
PpuMI	RGGWCCY	2 cut(s)	23, 2131
PshAI	GACNNNNGTC	1 cut(s)	1888
PshBI	ATTAAT	1 cut(s)	1527
PsiI	TTATAA	1 cut(s)	1620
Psp5II	RGGWCCY	2 cut(s)	23, 2131
Psp6I	CCWGG	9 cut(s)	275, 406, 541, 855, 1218, 1438, 1636, 1733, 2174
PspEI	GGTNACC	1 cut(s)	1745
PspFI	CCCAGC	1 cut(s)	184
PspGI	CCWGG	9 cut(s)	275, 406, 541, 855, 1218, 1438, 1636, 1733, 2174
PspN4I	GGNNCC	6 cut(s)	24, 182, 540, 1574, 1897, 2133
PspPI	GGNCC	8 cut(s)	23, 160, 686, 974, 1061, 1343, 1929, 2131
PspPPI	RGGWCCY	2 cut(s)	23, 2131
PspXI	VCTCGAGB	1 cut(s)	1002
PstI	CTGCAG	1 cut(s)	1192
PstNI	CAGNNNCTG	2 cut(s)	824, 1187
PsuI	RGATCY	2 cut(s)	1678, 1895
PteI	GCGCGC	1 cut(s)	1043
PvuII	CAGCTG	1 cut(s)	188
RsaI	GTAC	4 cut(s)	1000, 1369, 1413, 2009
RsaNI	GTAC	4 cut(s)	999, 1368, 1412, 2008
SapI	GCTCTTC	1 cut(s)	1584
SaqAI	TTAA	6 cut(s)	551, 663, 746, 1109, 1392, 1527
Sau96I	GGNCC	8 cut(s)	23, 160, 686, 974, 1061, 1343, 1929, 2131
SbfI	CCTGCAGG	1 cut(s)	1192
ScaI	AGTACT	3 cut(s)	1000, 1369, 2009
SchI	GAGTC	2 cut(s)	340, 1699
SdaI	CCTGCAGG	1 cut(s)	1192
SduI	GDGCHC	3 cut(s)	46, 731, 1009
SfaNI	GCATC	2 cut(s)	526, 1867
SfcI	CTRYAG	2 cut(s)	387, 1188
Sfr274I	CTCGAG	1 cut(s)	1002
SinI	GGWCC	5 cut(s)	23, 160, 974, 1343, 2131
SlaI	CTCGAG	1 cut(s)	1002
SmlI	CTYRAG	4 cut(s)	253, 350, 1002, 2040
SmoI	CTYRAG	4 cut(s)	253, 350, 1002, 2040
SphI	GCATGC	1 cut(s)	1598
Sse8387I	CCTGCAGG	1 cut(s)	1192
Sse9I	AATT	8 cut(s)	336, 584, 608, 664, 734, 1444, 1524, 1946
SseBI	AGGCCT	1 cut(s)	1200
SspMI	CTAG	4 cut(s)	956, 1452, 2049, 2078
StuI	AGGCCT	1 cut(s)	1200
TaiI	ACGT	1 cut(s)	1381
TaqI	TCGA	6 cut(s)	558, 1003, 1012, 1263, 1381, 2167
TasI	AATT	8 cut(s)	336, 584, 608, 664, 734, 1444, 1524, 1946
TatI	WGTACW	3 cut(s)	998, 1367, 2007
TauI	GCSGC	4 cut(s)	111, 691, 867, 1830
TfiI	GAWTC	6 cut(s)	6, 248, 794, 1121, 1157, 1840
Tru1I	TTAA	6 cut(s)	551, 663, 746, 1109, 1392, 1527
Tru9I	TTAA	6 cut(s)	551, 663, 746, 1109, 1392, 1527
TscAI	CASTG	6 cut(s)	110, 580, 736, 1717, 1816, 2206
TseFI	GTSAC	1 cut(s)	1745
TseI	GCWGC	7 cut(s)	570, 741, 1016, 1104, 1468, 1581, 2017
Tsp45I	GTSAC	1 cut(s)	1745
TspDTI	ATGAA	8 cut(s)	336, 609, 660, 795, 894, 1185, 1257, 1914
TspGWI	ACGGA	2 cut(s)	693, 2111
TspRI	CASTG	6 cut(s)	110, 580, 736, 1717, 1816, 2206
VneI	GTGCAC	1 cut(s)	42
VpaK11BI	GGWCC	5 cut(s)	23, 160, 974, 1343, 2131
VspI	ATTAAT	1 cut(s)	1527
XapI	RAATTY	1 cut(s)	1946
XbaI	TCTAGA	1 cut(s)	2077
XceI	RCATGY	1 cut(s)	1598
XhoI	CTCGAG	1 cut(s)	1002
XmnI	GAANNNNTTC	1 cut(s)	889
XspI	CTAG	4 cut(s)	956, 1452, 2049, 2078
ZrmI	AGTACT	3 cut(s)	1000, 1369, 2009
Zsp2I	ATGCAT	1 cut(s)	1943

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.