Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003930

Physical Location & Seq

Genomic Coordinates Forward (+)

50939305 .. 50946976

Gene Structure 7672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0401100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGAAGCCGCACACTAACACTGGCTTCGCCGCGAGTAGTCCACTCCACGTCACCTCTCCTCCCCGCGCCTCACCGGGAATCTCTCTCCGGCGACAACTCATCCACGTTTTCCGTCGATTATCTTACACTAAAGGCCGCCAAACTAGCCTCTCCGTCATTCTCCGTCGCAATCCTTCCGCGAATTCCGATAAAAACATCAGAGATTCAATACAAAATGAAAACTATTCAGACGAACCTGGCCGGAGTTCGCTCACGAGGAGACAAGCGCTACTCGCGTCACTGGCGCTCGGCGCGTGGTTTTTAAAATCGGCAGTGGCGAGTGCGGCGGACGACTCGCCTCCTCCGCCGTCTTCGCCTTCAATGACGGTGCCGGTGCCCGTTCCGAGAGCTGAGGAGAAGAAAAAAGAGGATGATGTGATAACGTCGAGGATTTACGACGCGACGGCGATCGGAGAGCCAATGGCGGTGGGAAAAGACAAGAGCAAGGTCTGGGAGAAGCTGATGAAGGCTAGGGTTGTGTATCTAGGCGAAGCAGAGCAGGTTCCGATTCGCGACGATAAAGAATTGGAGCTCGAAATTGTGAGGAATATGAACAAGAGGTGCTTGGAGAGTGAGAAAGCCTTGGCTTTGGCTCTTGAATCTTTTCCTTGTGATCTTCAGGACCAGCTCAATCAGTACATGAACAAAAGCATAGATGGTGAAGCTTTGAAGTCATACACTTCACATTGGCCGCCGCAACGATGGCAGGAGTATGAGCCTCTTCTAAGTTACTGCCGAGATAATGGTGTTCGGCTTGTGGCTTGTGGTACTCCACTCGCGGTCTTACGGACTGTACAAGCGGAGGGAATTCGTGGGCTTTCAAAGGCTGATCGTAAAATGTATGCCCCTCCAGCAGGTTCGGGGTTCATCTCAGGCCTCACTTCGATCACACACAGATCACCAGTTGATAGTAATTCTCTGACTCAAACTGTTCCATTTGGGCCAAGCTCATATCTATCTGCACAGGCAAGAGTGGTTGAGGATTATACCATGTCCCAGATTATTTTAAAGGCCATGGAAGGTGGAGGAGCAACTGGTATGCTAGTGGTTGTGACAGGTGCAAGCCATGTCAAGTATGGGCTTAGAGGGACAGGATTGCCAGCCAGAATTTCAAAAAAGATGCAAAAGAAAAACCAAGTAGTTATATTACTTGATCCTGAAAGACAGGACATACGGCGAGAGGGAGAAGTTCCTGTTGCTGATTTCTTGTGGTATTCTGCTGCCAGACCCTGCAATAGGAATTGTTTTGATCGTGCTGAAATTGCTCGAGTTATGAATGCAGCAGGCAGGAAAAGAGATGCCCTTCCACAGGACCTTCAGAAAGGACTGGATCTTGGTTTGGTATCTCCAGAGGTATTACAGAACTTCTTTGATCTGGAGCAATATCCTCTTGTTTCGGAACTTACTCAACGGTTCCAGGGTTTCAGGGAAAGATTGTTGGTAGATCCCAAATTCTTGCATAGATTAGCTATAGAAGAATCTATATCAATAACTACTACTCTAATAGCACAATATGAGAGGCGTAAAGAAAATTTCTTTGAGGAGCTGGACTACGTGATTACGGATACTTTAAGGGGGATTGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCTCCGACGTTGTCGTTCCTTTCATATGCTGATGAAATGAATGCGCCTGATAGCATGGATGCTATTAAAGGTCTGCTTGGGTCCATTCCAGATAATGCGTTTCAGAAGAGTCTTGTGGGGCAGGATTGGAGTATCAATCATAGACTTGCATCTGTGCTTTTGGGTGGTCTAAAACTAGCTAGTGTTGGATTTATTTCCAGTATTGGGGCTGTTGCTTCCTCAAATTGTCTATTTGCAGTTCGCAAATTCATCAATCCAGCTCTGGTTACTAATCAGCAAAAGAAAAGAACTCCAATACTTAAAACAGCAATAATCTATGGAGGCTTTCTCGGAACTTCCGCAAATCTCCGTTATCAGATTATTGCTGGACTAGTGGAGCATCGACTTTCTGACGAATTTTCTTCTCAAACAATACTTGTAAATATGCTGTCTTTCCTTTCTCGGACAATAAACTCTTATTGGGGAACTCAGCAATGGATTGATCTTGCACGCTTCACTGGACTGCAAGCTTCGAAGAGTGAACCTTCCATTTACCAAACACCGGATTCTACTATCCAGGTTGCATTGGAATGTAACAACACAGAGGAAACAAGTGTAGACGATATACAAAACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008327 GO:0036094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

755

Amino Acids

83.78

Weight (kDa)

8.75

Isoelectric Point (pI)

46.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cofac_haem_bdg	PF04187	163 - 383	1e-44	Haem-binding uptake, Tiki superfamily, ChaN
RETICULATA-like	PF11891	490 - 674	8e-61	Protein RETICULATA-related

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003930)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52230 AT5G52230 AT5G52230
fragaria_vesca	FvH4_7g29290 FvH4_7g29290
malus_domestica	MD01G1199300.v1.1 MD07G1267200.v1.1
prunus_persica	Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1 Prupe.2G292800_v2.0.a1
pyrus_communis	pycom01g20920 pycom07g24480
rosa_chinensis	RchiOBHm_Chr1g0377031
rosa_laevigata	RLG00000026548
rosa_multiflora	Rmu_ssc0000155.1_g000022
rosa_roxburghii	Rroxscaffold_4G00281510
rosa_rugosa	Rorug01G0401000 Rorug01G0401100
rosa_samantha	Rh1AG418000 Rh1BG377300 Rh1CG391300 Rh1DG408000
rosa_wichuraiana	Rw1G036700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	529, 884
AccB1I	GGYRCC	2 cut(s)	367, 373
AccI	GTMKAC	1 cut(s)	2247
AccII	CGCG	8 cut(s)	32, 66, 179, 275, 293, 440, 552, 818
AclWI	GGATC	3 cut(s)	1187, 1377, 1478
AcoI	YGGCCR	2 cut(s)	238, 728
AcsI	RAATTY	7 cut(s)	181, 846, 1146, 1490, 1570, 1895, 2045
AcuI	CTGAAG	2 cut(s)	641, 1340
AfaI	GTAC	3 cut(s)	677, 808, 834
AfeI	AGCGCT	1 cut(s)	267
AfiI	CCNNNNNNNGG	5 cut(s)	893, 1275, 1348, 1854, 2191
AgsI	TTSAA	6 cut(s)	207, 360, 638, 709, 861, 1152
AhlI	ACTAGT	1 cut(s)	2020
AjiI	CACGTC	1 cut(s)	49
AjnI	CCWGG	3 cut(s)	235, 1455, 2205
Alw21I	GWGCWC	1 cut(s)	573
Alw26I	GTCTC	1 cut(s)	253
AlwI	GGATC	3 cut(s)	1187, 1377, 1478
AlwNI	CAGNNNCTG	1 cut(s)	1269
Ama87I	CYCGRG	1 cut(s)	1305
Aor51HI	AGCGCT	1 cut(s)	267
AoxI	GGCC	6 cut(s)	133, 238, 728, 913, 980, 1050
ApeKI	GCWGC	2 cut(s)	1259, 1319
ApoI	RAATTY	7 cut(s)	181, 846, 1146, 1490, 1570, 1895, 2045
Asp700I	GAANNNNTTC	1 cut(s)	642
AspLEI	GCGC	5 cut(s)	68, 268, 286, 293, 1696
AspS9I	GGNCC	4 cut(s)	661, 980, 1351, 1731
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	4 cut(s)	43, 63, 710, 930
AsuII	TTCGAA	1 cut(s)	2162
AvaI	CYCGRG	1 cut(s)	1305
AvaII	GGWCC	3 cut(s)	661, 1351, 1731
BaeGI	GKGCMC	1 cut(s)	378
BanI	GGYRCC	2 cut(s)	367, 373
BanII	GRGCYC	1 cut(s)	573
BauI	CACGAG	1 cut(s)	253
BbsI	GAAGAC	1 cut(s)	342
Bbv12I	GWGCWC	1 cut(s)	573
BbvCI	CCTCAGC	1 cut(s)	390
BbvI	GCAGC	2 cut(s)	1246, 1331
BccI	CCATC	2 cut(s)	689, 735
BceAI	ACGGC	3 cut(s)	331, 459, 1229
BciT130I	CCWGG	3 cut(s)	237, 1457, 2207
BciVI	GTATCC	1 cut(s)	1597
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	1 cut(s)	253
BcuI	ACTAGT	1 cut(s)	2020
BfaI	CTAG	7 cut(s)	144, 510, 524, 1082, 1826, 1830, 2021
BfmI	CTRYAG	1 cut(s)	1509
BfoI	RGCGCY	2 cut(s)	269, 287
BfuAI	ACCTGC	2 cut(s)	529, 884
BfuI	GTATCC	1 cut(s)	1597
BisI	GCNGC	8 cut(s)	8, 30, 136, 324, 731, 734, 1260, 1320
BlsI	GCNGC	8 cut(s)	9, 31, 137, 325, 732, 735, 1261, 1321
Bme1390I	CCNGG	4 cut(s)	75, 237, 1457, 2207
Bme18I	GGWCC	3 cut(s)	661, 1351, 1731
BmeT110I	CYCGRG	1 cut(s)	1305
BmgBI	CACGTC	1 cut(s)	49
BmgT120I	GGNCC	4 cut(s)	661, 980, 1351, 1731
BmiI	GGNNCC	5 cut(s)	369, 375, 543, 1454, 1732
BmrFI	CCNGG	4 cut(s)	75, 237, 1457, 2207
BmsI	GCATC	5 cut(s)	1149, 1327, 1699, 1808, 2038
BpiI	GAAGAC	1 cut(s)	342
BplI	GAGNNNNNCTC	2 cut(s)	1962, 1994
BpmI	CTGGAG	3 cut(s)	873, 1371, 1436
Bpu10I	CCTNAGC	1 cut(s)	390
Bpu14I	TTCGAA	1 cut(s)	2162
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	1594
BsaJI	CCNNGG	3 cut(s)	621, 1053, 1456
BsaWI	WCCGGW	1 cut(s)	2191
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	5 cut(s)	893, 1275, 1348, 1854, 2191
Bse118I	RCCGGY	1 cut(s)	370
Bse1I	ACTGG	7 cut(s)	25, 285, 941, 1078, 1371, 1848, 2152
Bse3DI	GCAATG	1 cut(s)	2129
BseBI	CCWGG	3 cut(s)	237, 1457, 2207
BseDI	CCNNGG	3 cut(s)	621, 1053, 1456
BseGI	GGATG	3 cut(s)	99, 415, 1714
BseLI	CCNNNNNNNGG	5 cut(s)	893, 1275, 1348, 1854, 2191
BseMI	GCAATG	1 cut(s)	2129
BseMII	CTCAG	3 cut(s)	381, 924, 2132
BseNI	ACTGG	7 cut(s)	25, 285, 941, 1078, 1371, 1848, 2152
BseRI	GAGGAG	6 cut(s)	48, 271, 330, 407, 1080, 1595
BseSI	GKGCMC	1 cut(s)	378
BseXI	GCAGC	2 cut(s)	1246, 1331
BsgI	GTGCAG	1 cut(s)	984
Bsh1236I	CGCG	8 cut(s)	32, 66, 179, 275, 293, 440, 552, 818
Bsh1285I	CGRYCG	1 cut(s)	450
BshFI	GGCC	6 cut(s)	135, 240, 730, 915, 982, 1052
BshNI	GGYRCC	2 cut(s)	367, 373
BsiEI	CGRYCG	1 cut(s)	450
BsiHKAI	GWGCWC	1 cut(s)	573
BsiHKCI	CYCGRG	1 cut(s)	1305
BsiSI	CCGG	5 cut(s)	74, 88, 241, 371, 2192
BslFI	GGGAC	2 cut(s)	1018, 1141
BslI	CCNNNNNNNGG	5 cut(s)	893, 1275, 1348, 1854, 2191
BsmAI	GTCTC	1 cut(s)	253
BsmFI	GGGAC	2 cut(s)	1018, 1141
BsmI	GAATGC	2 cut(s)	1321, 1696
BsnI	GGCC	6 cut(s)	135, 240, 730, 915, 982, 1052
BsoBI	CYCGRG	1 cut(s)	1305
Bsp119I	TTCGAA	1 cut(s)	2162
Bsp1286I	GDGCHC	2 cut(s)	378, 573
Bsp1407I	TGTACA	1 cut(s)	832
Bsp19I	CCATGG	1 cut(s)	1053
Bsp68I	TCGCGA	1 cut(s)	552
BspANI	GGCC	6 cut(s)	135, 240, 730, 915, 982, 1052
BspCNI	CTCAG	3 cut(s)	382, 923, 2131
BspFNI	CGCG	8 cut(s)	32, 66, 179, 275, 293, 440, 552, 818
BspLI	GGNNCC	5 cut(s)	369, 375, 543, 1454, 1732
BspMI	ACCTGC	2 cut(s)	529, 884
BspPI	GGATC	3 cut(s)	1187, 1377, 1478
BspT104I	TTCGAA	1 cut(s)	2162
BspT107I	GGYRCC	2 cut(s)	367, 373
BsrDI	GCAATG	1 cut(s)	2129
BsrFI	RCCGGY	1 cut(s)	370
BsrGI	TGTACA	1 cut(s)	832
BsrI	ACTGG	7 cut(s)	25, 285, 941, 1078, 1371, 1848, 2152
BssAI	RCCGGY	1 cut(s)	370
BssECI	CCNNGG	3 cut(s)	621, 1053, 1456
BssSI	CACGAG	1 cut(s)	253
BssT1I	CCWWGG	2 cut(s)	621, 1053
Bst2BI	CACGAG	1 cut(s)	253
Bst2UI	CCWGG	3 cut(s)	237, 1457, 2207
Bst4CI	ACNGT	5 cut(s)	367, 832, 970, 1452, 1639
Bst6I	CTCTTC	3 cut(s)	765, 1751, 2159
BstAUI	TGTACA	1 cut(s)	832
BstBAI	YACGTR	1 cut(s)	1594
BstBI	TTCGAA	1 cut(s)	2162
BstC8I	GCNNGC	5 cut(s)	1102, 1140, 1324, 2140, 2157
BstDEI	CTNAG	5 cut(s)	390, 764, 910, 1121, 2118
BstDSI	CCRYGG	1 cut(s)	1053
BstENI	CCTNNNNNAGG	3 cut(s)	891, 1273, 1346
BstF5I	GGATG	3 cut(s)	99, 415, 1714
BstFNI	CGCG	8 cut(s)	32, 66, 179, 275, 293, 440, 552, 818
BstH2I	RGCGCY	2 cut(s)	269, 287
BstHHI	GCGC	5 cut(s)	68, 268, 286, 293, 1696
BstMAI	GTCTC	1 cut(s)	253
BstMCI	CGRYCG	1 cut(s)	450
BstNI	CCWGG	3 cut(s)	237, 1457, 2207
BstSCI	CCNGG	4 cut(s)	73, 235, 1455, 2205
BstSFI	CTRYAG	1 cut(s)	1509
BstSLI	GKGCMC	1 cut(s)	378
BstUI	CGCG	8 cut(s)	32, 66, 179, 275, 293, 440, 552, 818
BstV1I	GCAGC	2 cut(s)	1246, 1331
BstV2I	GAAGAC	1 cut(s)	342
BstX2I	RGATCY	2 cut(s)	1369, 1483
BstYI	RGATCY	2 cut(s)	1369, 1483
BsuI	GTATCC	1 cut(s)	1597
BsuRI	GGCC	6 cut(s)	135, 240, 730, 915, 982, 1052
BtgI	CCRYGG	1 cut(s)	1053
BtrI	CACGTC	1 cut(s)	49
BtsCI	GGATG	3 cut(s)	99, 415, 1714
BtsI	GCAGTG	1 cut(s)	318
BtsIMutI	CAGTG	5 cut(s)	18, 278, 318, 1644, 2145
BtuMI	TCGCGA	1 cut(s)	552
BveI	ACCTGC	2 cut(s)	529, 884
Cac8I	GCNNGC	5 cut(s)	1102, 1140, 1324, 2140, 2157
CaiI	CAGNNNCTG	1 cut(s)	1269
CfoI	GCGC	5 cut(s)	68, 268, 286, 293, 1696
Cfr10I	RCCGGY	1 cut(s)	370
Cfr13I	GGNCC	4 cut(s)	661, 980, 1351, 1731
CseI	GACGC	2 cut(s)	264, 446
Csp6I	GTAC	3 cut(s)	676, 807, 833
CspCI	CAANNNNNGTGG	2 cut(s)	447, 482
CviAII	CATG	5 cut(s)	679, 1030, 1054, 1106, 1705
CviQI	GTAC	3 cut(s)	676, 807, 833
DdeI	CTNAG	5 cut(s)	390, 764, 910, 1121, 2118
DraI	TTTAAA	2 cut(s)	303, 1047
EaeI	YGGCCR	2 cut(s)	238, 728
Eam1104I	CTCTTC	3 cut(s)	765, 1751, 2159
EarI	CTCTTC	3 cut(s)	765, 1751, 2159
EciI	GGCGGA	2 cut(s)	333, 341
Ecl136II	GAGCTC	1 cut(s)	571
Eco130I	CCWWGG	2 cut(s)	621, 1053
Eco147I	AGGCCT	1 cut(s)	915
Eco24I	GRGCYC	1 cut(s)	573
Eco47I	GGWCC	3 cut(s)	661, 1351, 1731
Eco47III	AGCGCT	1 cut(s)	267
Eco53kI	GAGCTC	1 cut(s)	571
Eco57I	CTGAAG	2 cut(s)	641, 1340
Eco88I	CYCGRG	1 cut(s)	1305
EcoICRI	GAGCTC	1 cut(s)	571
EcoNI	CCTNNNNNAGG	3 cut(s)	891, 1273, 1346
EcoO109I	RGGNCCY	1 cut(s)	1351
EcoRI	GAATTC	2 cut(s)	181, 846
EcoRII	CCWGG	3 cut(s)	235, 1455, 2205
EcoT14I	CCWWGG	2 cut(s)	621, 1053
EcoT38I	GRGCYC	1 cut(s)	573
ErhI	CCWWGG	2 cut(s)	621, 1053
FaeI	CATG	5 cut(s)	682, 1033, 1057, 1109, 1708
FalI	AAGNNNNNCTT	4 cut(s)	587, 619, 1710, 1742
FaqI	GGGAC	2 cut(s)	1018, 1141
FatI	CATG	5 cut(s)	678, 1029, 1053, 1105, 1704
FauI	CCCGC	1 cut(s)	71
FauNDI	CATATG	1 cut(s)	1675
FblI	GTMKAC	1 cut(s)	2247
Fnu4HI	GCNGC	8 cut(s)	8, 30, 136, 324, 731, 734, 1260, 1320
FokI	GGATG	3 cut(s)	86, 422, 1721
FriOI	GRGCYC	1 cut(s)	573
Fsp4HI	GCNGC	8 cut(s)	8, 30, 136, 324, 731, 734, 1260, 1320
FspBI	CTAG	7 cut(s)	144, 510, 524, 1082, 1826, 1830, 2021
GlaI	GCGC	5 cut(s)	67, 267, 285, 292, 1695
GluI	GCNGC	8 cut(s)	8, 30, 136, 324, 731, 734, 1260, 1320
GsuI	CTGGAG	3 cut(s)	873, 1371, 1436
HaeII	RGCGCY	2 cut(s)	269, 287
HaeIII	GGCC	6 cut(s)	135, 240, 730, 915, 982, 1052
HapII	CCGG	5 cut(s)	74, 88, 241, 371, 2192
HgaI	GACGC	2 cut(s)	264, 446
HhaI	GCGC	5 cut(s)	68, 268, 286, 293, 1696
Hin1II	CATG	5 cut(s)	682, 1033, 1057, 1109, 1708
Hin6I	GCGC	5 cut(s)	66, 266, 284, 291, 1694
HinP1I	GCGC	5 cut(s)	66, 266, 284, 291, 1694
HindIII	AAGCTT	2 cut(s)	702, 2157
HinfI	GANTC	9 cut(s)	78, 203, 332, 547, 638, 961, 1517, 1759, 2195
HpaII	CCGG	5 cut(s)	74, 88, 241, 371, 2192
HphI	GGTGA	4 cut(s)	43, 63, 710, 930
Hpy166II	GTNNAC	3 cut(s)	41, 2171, 2248
Hpy188III	TCNNGA	8 cut(s)	253, 551, 635, 659, 1196, 1388, 1415, 1739
Hpy8I	GTNNAC	3 cut(s)	41, 2171, 2248
Hpy99I	CGWCG	7 cut(s)	117, 168, 427, 440, 445, 557, 1660
HpyAV	CCTTC	7 cut(s)	183, 366, 499, 1052, 1352, 1364, 2184
HpyCH4III	ACNGT	5 cut(s)	367, 832, 970, 1452, 1639
HpyCH4IV	ACGT	5 cut(s)	48, 105, 422, 1593, 1658
HpyF3I	CTNAG	5 cut(s)	390, 764, 910, 1121, 2118
HpySE526I	ACGT	5 cut(s)	48, 105, 422, 1593, 1658
Hsp92II	CATG	5 cut(s)	682, 1033, 1057, 1109, 1708
HspAI	GCGC	5 cut(s)	66, 266, 284, 291, 1694
LmnI	GCTCC	6 cut(s)	568, 1067, 1417, 1582, 1657, 2026
Lsp1109I	GCAGC	2 cut(s)	1246, 1331
LweI	GCATC	5 cut(s)	1149, 1327, 1699, 1808, 2038
MaeI	CTAG	7 cut(s)	144, 510, 524, 1082, 1826, 1830, 2021
MaeII	ACGT	5 cut(s)	48, 105, 422, 1593, 1658
MaeIII	GTNAC	6 cut(s)	49, 276, 767, 1090, 1915, 2222
MboII	GAAGA	8 cut(s)	342, 409, 647, 752, 1526, 1768, 2043, 2176
MflI	RGATCY	2 cut(s)	1369, 1483
MhlI	GDGCHC	2 cut(s)	378, 573
MlyI	GAGTC	3 cut(s)	326, 955, 1768
MmeI	TCCRAC	2 cut(s)	1679, 1816
MroXI	GAANNNNTTC	1 cut(s)	642
MseI	TTAA	5 cut(s)	302, 1046, 1610, 1716, 1950
MslI	CAYNNNNRTG	1 cut(s)	2218
MspI	CCGG	5 cut(s)	74, 88, 241, 371, 2192
MspR9I	CCNGG	4 cut(s)	75, 237, 1457, 2207
Mva1269I	GAATGC	2 cut(s)	1321, 1696
MvaI	CCWGG	3 cut(s)	237, 1457, 2207
MvnI	CGCG	8 cut(s)	32, 66, 179, 275, 293, 440, 552, 818
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	1 cut(s)	1053
NdeI	CATATG	1 cut(s)	1675
NlaIII	CATG	5 cut(s)	682, 1033, 1057, 1109, 1708
NlaIV	GGNNCC	5 cut(s)	369, 375, 543, 1454, 1732
NmeAIII	GCCGAG	2 cut(s)	267, 800
NmuCI	GTSAC	3 cut(s)	49, 276, 1090
NruI	TCGCGA	1 cut(s)	552
NspV	TTCGAA	1 cut(s)	2162
PaeR7I	CTCGAG	1 cut(s)	1305
PceI	AGGCCT	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	1 cut(s)	314
PctI	GAATGC	2 cut(s)	1321, 1696
PdmI	GAANNNNTTC	1 cut(s)	642
PfeI	GAWTC	6 cut(s)	78, 203, 547, 638, 1517, 2195
PflFI	GACNNNGTC	1 cut(s)	1660
PkrI	GCNGC	8 cut(s)	9, 31, 137, 325, 732, 735, 1261, 1321
Ple19I	CGATCG	1 cut(s)	450
PleI	GAGTC	3 cut(s)	326, 955, 1767
PpsI	GAGTC	3 cut(s)	326, 955, 1767
Ppu21I	YACGTR	1 cut(s)	1594
PpuMI	RGGWCCY	1 cut(s)	1351
Psp124BI	GAGCTC	1 cut(s)	573
Psp5II	RGGWCCY	1 cut(s)	1351
Psp6I	CCWGG	3 cut(s)	235, 1455, 2205
PspGI	CCWGG	3 cut(s)	235, 1455, 2205
PspN4I	GGNNCC	5 cut(s)	369, 375, 543, 1454, 1732
PspPI	GGNCC	4 cut(s)	661, 980, 1351, 1731
PspPPI	RGGWCCY	1 cut(s)	1351
PspXI	VCTCGAGB	1 cut(s)	1305
PstNI	CAGNNNCTG	1 cut(s)	1269
PsuI	RGATCY	2 cut(s)	1369, 1483
PsyI	GACNNNGTC	1 cut(s)	1660
PvuI	CGATCG	1 cut(s)	450
RruI	TCGCGA	1 cut(s)	552
RsaI	GTAC	3 cut(s)	677, 808, 834
RsaNI	GTAC	3 cut(s)	676, 807, 833
RseI	CAYNNNNRTG	1 cut(s)	2218
SacI	GAGCTC	1 cut(s)	573
SaqAI	TTAA	5 cut(s)	302, 1046, 1610, 1716, 1950
SatI	GCNGC	8 cut(s)	8, 30, 136, 324, 731, 734, 1260, 1320
Sau96I	GGNCC	4 cut(s)	661, 980, 1351, 1731
SchI	GAGTC	3 cut(s)	326, 955, 1768
ScrFI	CCNGG	4 cut(s)	75, 237, 1457, 2207
SduI	GDGCHC	2 cut(s)	378, 573
SfaNI	GCATC	5 cut(s)	1149, 1327, 1699, 1808, 2038
SfcI	CTRYAG	1 cut(s)	1509
Sfr274I	CTCGAG	1 cut(s)	1305
SfuI	TTCGAA	1 cut(s)	2162
SinI	GGWCC	3 cut(s)	661, 1351, 1731
SlaI	CTCGAG	1 cut(s)	1305
SmiMI	CAYNNNNRTG	1 cut(s)	2218
SmlI	CTYRAG	1 cut(s)	1305
SmoI	CTYRAG	1 cut(s)	1305
SpeI	ACTAGT	1 cut(s)	2020
SseBI	AGGCCT	1 cut(s)	915
SspMI	CTAG	7 cut(s)	144, 510, 524, 1082, 1826, 1830, 2021
SstI	GAGCTC	1 cut(s)	573
StuI	AGGCCT	1 cut(s)	915
StyD4I	CCNGG	4 cut(s)	73, 235, 1455, 2205
StyI	CCWWGG	2 cut(s)	621, 1053
TaaI	ACNGT	5 cut(s)	367, 832, 970, 1452, 1639
TaiI	ACGT	5 cut(s)	51, 108, 425, 1596, 1661
TaqI	TCGA	7 cut(s)	115, 425, 573, 923, 1306, 2032, 2162
TatI	WGTACW	2 cut(s)	675, 832
TauI	GCSGC	6 cut(s)	10, 32, 138, 326, 733, 736
TfiI	GAWTC	6 cut(s)	78, 203, 547, 638, 1517, 2195
Tru1I	TTAA	5 cut(s)	302, 1046, 1610, 1716, 1950
Tru9I	TTAA	5 cut(s)	302, 1046, 1610, 1716, 1950
TscAI	CASTG	5 cut(s)	25, 285, 318, 1644, 2152
TseFI	GTSAC	3 cut(s)	49, 276, 1090
TseI	GCWGC	2 cut(s)	1259, 1319
Tsp45I	GTSAC	3 cut(s)	49, 276, 1090
TspGWI	ACGGA	6 cut(s)	101, 142, 152, 841, 1616, 1988
TspRI	CASTG	5 cut(s)	25, 285, 318, 1644, 2152
Tth111I	GACNNNGTC	1 cut(s)	1660
VpaK11BI	GGWCC	3 cut(s)	661, 1351, 1731
XagI	CCTNNNNNAGG	3 cut(s)	891, 1273, 1346
XapI	RAATTY	7 cut(s)	181, 846, 1146, 1490, 1570, 1895, 2045
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1112
XhoI	CTCGAG	1 cut(s)	1305
XmiI	GTMKAC	1 cut(s)	2247
XmnI	GAANNNNTTC	1 cut(s)	642
XspI	CTAG	7 cut(s)	144, 510, 524, 1082, 1826, 1830, 2021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.