Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0009331

Physical Location & Seq

Genomic Coordinates Forward (+)

20392906 .. 20397155

Gene Structure 4250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGTCGTCGACGCTGCTGGAGCAGACACGTGCAGCTCACGAGGAGGTGGAGCGGCTGGAGCGGCTGATAGTGAAGGACTTCATGAACGAGCCGCCGTCCAGCAAGGACCGCTTGTACCAGGGCCACCGCGTCCGCCAGCTGATCGATACCATCACCTCCACCACCGAAAAACTTATTGAGATCGATCAAGATAAAGATAATGCGAGGAAGGACGAGATTGCGGCTCTCGGAGGCCAGACTGCCACTGGCACCAACGTTTTCAGCGCATTTTATGATAGATTGAAAGAGATTCGTGAGTATCACCGAAAGCATCCAGTTGCTCGGGTTGTTGATGCTAATGAGGAAGAAGAAGCACTGCTTAAGGAGGAACCTCAAATCGAGTTCAGTGGAGAGGAAGCTTTTGGACGATACCTTGACTTGCATGAACTATACAACCAGTATATTAATTCCAAATTTGGAGAACCTATTGAGTACTCTGCTTACCTCGATACTATTTCACAACCACAAAAGATTCCTCACAAACTGAAGTCGTCAAGGCAGTACAGGGAATATATGGAAAATCTACTCGCATATCTGATATATTTTTTCCAGAGGACAGAACCTTTGCAAGATCTTGACAGGATATTTTTGAAGGTTGAAACTGAATTTGAAGAGCAATGGGTAGATGGTAAGGTTAAAGGATGGGAAAATGAGAAGCAAGAAAATGGGCATGTTCAAGATCGACCTACTATGATCGATCTTGATTATTATAGCACAGTGGAAGAACTTATGGAAGTGGGTCCTGAAAAGCTAAAGGAGGCACTAGCATCATTAGGACTGAAGACGGGTGGTACTGTTCAGCAGCGTGCAGAGAGGCTTTTCCTTACAAAGGACACACCTCTGGAGAAGTTGGACAAGAAACATTTTGCCAAAGGTTCGCGTGGTGCTGAACAAAATGGGGCTGCTGCAGCTCCACAACAAGCTATTGAAAGAACAAGAGACAACATCATGAAGAAACAGGCTTTGACGTATGAAGAAATTGAAGCAGAGCGTGAAGAGGAGGAGACACAGGCCGATACTGAAAGTGACGATGATGAACAACAGATTTACAATCCACTGAAATTGCCAATGGGTTGGGATGGGAAGCCCATTCCGTACTGGCTGTATAAGCTTCATGGTCTTGGTCAGGAATTCAAGTGTGAGATTTGCGGGAATTACAGTTACTGGGGACGTAGAGCTTTCGAGAGACATTTTAAGGAATGGCGCCATCAGCATGGTATGCGTTGCCTTGGCATACCGAACACCAAGAACTTCAATGAGATCACATCAATTGAGGAAGCTAAAGAACTCTGGAAGAGGATACAAGCACGACAAGGCGTGAACAAGTGGCGCCCGGATCTTGAAGAAGAGTACGAAGACAGAGAGGGTAACATATACAATAAGAAGACATACACCGATCTGCAGCGACAGGGACTGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0005829 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043900 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046483 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065003 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF3449 SF3A3 SF3a60_bindingd Telomere_Sde2_2

Protein Analysis

487

Amino Acids

57.15

Weight (kDa)

5.16

Isoelectric Point (pI)

43.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF3a60_bindingd	PF12108	80 - 105	4.3e-12	Splicing factor SF3a60 binding domain
SF3A3	PF16837	127 - 174	2.2e-17	Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
SDE2_2C	PF13297	223 - 304	1.6e-29	Replication stress response SDE2 C-terminal
SF3a60_Prp9_C	PF11931	367 - 486	4.9e-57	SF3a60/Prp9 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06160
fragaria_vesca	FvH4_1g22860 FvH4_5g28470 FvH4_7g05370 FvH4_7g06390
malus_domestica	MD01G1219700.v1.1 MD07G1290300.v1.1
prunus_persica	Prupe.2G311500_v2.0.a1
pyrus_communis	pycom01g22950 pycom07g26290
rosa_chinensis	RchiOBHm_Chr1g0331941
rosa_laevigata	RLG00000025855 RLG00000029702
rosa_multiflora	Rmu_sc0004874.1_g000018 Rmu_sc0008128.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318600
rosa_rugosa	Rorug01G0097000
rosa_samantha	Rh1AG121100 Rh1BG092700 Rh1CG115900 Rh1DG127000
rosa_wichuraiana	Rw1G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	248, 1242, 1368
AccBSI	CCGCTC	2 cut(s)	52, 61
AccI	GTMKAC	1 cut(s)	8
AccII	CGCG	2 cut(s)	129, 919
AciI	CCGC	8 cut(s)	52, 61, 92, 109, 127, 133, 221, 1188
AclI	AACGTT	1 cut(s)	255
AclWI	GGATC	1 cut(s)	1383
AcsI	RAATTY	3 cut(s)	452, 644, 1169
AcuI	CTGAAG	2 cut(s)	545, 839
AcvI	CACGTG	1 cut(s)	29
AcyI	GRCGYC	2 cut(s)	1243, 1369
AfaI	GTAC	6 cut(s)	116, 473, 542, 832, 1136, 1391
AfiI	CCNNNNNNNGG	1 cut(s)	868
AflII	CTTAAG	1 cut(s)	359
AflIII	ACRYGT	1 cut(s)	26
AjnI	CCWGG	1 cut(s)	117
AluBI	AGCT	9 cut(s)	35, 139, 398, 790, 950, 962, 1150, 1217, 1319
AluI	AGCT	9 cut(s)	35, 139, 398, 790, 950, 962, 1150, 1217, 1319
Alw26I	GTCTC	3 cut(s)	972, 1037, 1219
AlwI	GGATC	1 cut(s)	1383
AlwNI	CAGNNNCTG	2 cut(s)	1203, 1453
Ama87I	CYCGRG	1 cut(s)	321
AoxI	GGCC	3 cut(s)	121, 232, 1050
ApeKI	GCWGC	7 cut(s)	13, 32, 841, 941, 944, 947, 1441
ApoI	RAATTY	3 cut(s)	452, 644, 1169
ArsI	GACNNNNNNTTYG	2 cut(s)	586, 618
AseI	ATTAAT	1 cut(s)	444
Asp700I	GAANNNNTTC	1 cut(s)	77
AspLEI	GCGC	3 cut(s)	266, 1245, 1371
AspS9I	GGNCC	3 cut(s)	106, 121, 779
AsuC2I	CCSGG	1 cut(s)	1373
AsuHPI	GGTGA	2 cut(s)	145, 293
AvaI	CYCGRG	1 cut(s)	321
AvaII	GGWCC	2 cut(s)	106, 779
BanI	GGYRCC	3 cut(s)	248, 1242, 1368
BauI	CACGAG	1 cut(s)	38
BbrPI	CACGTG	1 cut(s)	29
BbsI	GAAGAC	3 cut(s)	827, 1401, 1430
BbvI	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1453
BccI	CCATC	5 cut(s)	158, 659, 675, 1112, 1254
BceAI	ACGGC	1 cut(s)	79
BciT130I	CCWGG	1 cut(s)	119
BciVI	GTATCC	1 cut(s)	1332
BcnI	CCSGG	1 cut(s)	1373
BcoDI	GTCTC	3 cut(s)	972, 1037, 1219
BfaI	CTAG	1 cut(s)	803
BfmI	CTRYAG	2 cut(s)	945, 1439
BfoI	RGCGCY	2 cut(s)	1246, 1372
BfrI	CTTAAG	1 cut(s)	359
BfuI	GTATCC	1 cut(s)	1332
BglII	AGATCT	1 cut(s)	610
BmcAI	AGTACT	1 cut(s)	473
Bme1390I	CCNGG	2 cut(s)	119, 1373
Bme18I	GGWCC	2 cut(s)	106, 779
BmeT110I	CYCGRG	1 cut(s)	321
BmgT120I	GGNCC	3 cut(s)	106, 121, 779
BmiI	GGNNCC	5 cut(s)	250, 369, 780, 1244, 1370
BmrFI	CCNGG	2 cut(s)	119, 1373
BmrI	ACTGGG	1 cut(s)	1213
BmsI	GCATC	3 cut(s)	319, 322, 815
BmuI	ACTGGG	1 cut(s)	1213
BpiI	GAAGAC	3 cut(s)	827, 1401, 1430
BpmI	CTGGAG	3 cut(s)	38, 77, 902
BpuMI	CCSGG	1 cut(s)	1373
Bsa29I	ATCGAT	3 cut(s)	144, 183, 735
BsaAI	YACGTR	1 cut(s)	29
BsaHI	GRCGYC	2 cut(s)	1243, 1369
BsaJI	CCNNGG	2 cut(s)	118, 1267
Bsc4I	CCNNNNNNNGG	1 cut(s)	868
Bse1I	ACTGG	5 cut(s)	250, 314, 436, 1142, 1208
Bse3DI	GCAATG	1 cut(s)	662
BseBI	CCWGG	1 cut(s)	119
BseCI	ATCGAT	3 cut(s)	144, 183, 735
BseDI	CCNNGG	2 cut(s)	118, 1267
BseGI	GGATG	3 cut(s)	310, 686, 1123
BseLI	CCNNNNNNNGG	1 cut(s)	868
BseMI	GCAATG	1 cut(s)	662
BseNI	ACTGG	5 cut(s)	250, 314, 436, 1142, 1208
BseRI	GAGGAG	3 cut(s)	56, 1052, 1055
BseXI	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1453
BsgI	GTGCAG	2 cut(s)	51, 867
Bsh1236I	CGCG	2 cut(s)	129, 919
BshFI	GGCC	3 cut(s)	123, 234, 1052
BshNI	GGYRCC	3 cut(s)	248, 1242, 1368
BshVI	ATCGAT	3 cut(s)	144, 183, 735
BsiHKCI	CYCGRG	1 cut(s)	321
BsiSI	CCGG	1 cut(s)	1373
BslFI	GGGAC	1 cut(s)	1221
BslI	CCNNNNNNNGG	1 cut(s)	868
BsmAI	GTCTC	3 cut(s)	972, 1037, 1219
BsmFI	GGGAC	1 cut(s)	1221
BsnI	GGCC	3 cut(s)	123, 234, 1052
BsoBI	CYCGRG	1 cut(s)	321
BspACI	CCGC	8 cut(s)	52, 61, 92, 109, 127, 133, 221, 1188
BspANI	GGCC	3 cut(s)	123, 234, 1052
BspDI	ATCGAT	3 cut(s)	144, 183, 735
BspFNI	CGCG	2 cut(s)	129, 919
BspHI	TCATGA	2 cut(s)	81, 987
BspLI	GGNNCC	5 cut(s)	250, 369, 780, 1244, 1370
BspMAI	CTGCAG	2 cut(s)	949, 1443
BspPI	GGATC	1 cut(s)	1383
BspQI	GCTCTTC	1 cut(s)	645
BspT107I	GGYRCC	3 cut(s)	248, 1242, 1368
BspTI	CTTAAG	1 cut(s)	359
BsrBI	CCGCTC	2 cut(s)	52, 61
BsrDI	GCAATG	1 cut(s)	662
BsrI	ACTGG	5 cut(s)	250, 314, 436, 1142, 1208
BssECI	CCNNGG	2 cut(s)	118, 1267
BssNI	GRCGYC	2 cut(s)	1243, 1369
BssSI	CACGAG	1 cut(s)	38
BssT1I	CCWWGG	1 cut(s)	1267
Bst2BI	CACGAG	1 cut(s)	38
Bst2UI	CCWGG	1 cut(s)	119
Bst4CI	ACNGT	3 cut(s)	757, 835, 1199
Bst6I	CTCTTC	4 cut(s)	645, 1029, 1328, 1380
BstACI	GRCGYC	2 cut(s)	1243, 1369
BstAFI	CTTAAG	1 cut(s)	359
BstAPI	GCANNNNNTGC	1 cut(s)	1258
BstBAI	YACGTR	1 cut(s)	29
BstC8I	GCNNGC	2 cut(s)	137, 846
BstENI	CCTNNNNNAGG	1 cut(s)	866
BstF5I	GGATG	3 cut(s)	310, 686, 1123
BstFNI	CGCG	2 cut(s)	129, 919
BstH2I	RGCGCY	2 cut(s)	1246, 1372
BstHHI	GCGC	3 cut(s)	266, 1245, 1371
BstMAI	GTCTC	3 cut(s)	972, 1037, 1219
BstMWI	GCNNNNNNNGC	8 cut(s)	19, 58, 61, 108, 947, 1147, 1249, 1258
BstNI	CCWGG	1 cut(s)	119
BstNSI	RCATGY	1 cut(s)	713
BstSCI	CCNGG	2 cut(s)	117, 1371
BstSFI	CTRYAG	2 cut(s)	945, 1439
BstUI	CGCG	2 cut(s)	129, 919
BstV1I	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1453
BstV2I	GAAGAC	3 cut(s)	827, 1401, 1430
BstX2I	RGATCY	2 cut(s)	610, 1375
BstXI	CCANNNNNNTGG	2 cut(s)	1113, 1253
BstYI	RGATCY	2 cut(s)	610, 1375
Bsu15I	ATCGAT	3 cut(s)	144, 183, 735
BsuI	GTATCC	1 cut(s)	1332
BsuRI	GGCC	3 cut(s)	123, 234, 1052
BsuTUI	ATCGAT	3 cut(s)	144, 183, 735
BtsCI	GGATG	3 cut(s)	310, 686, 1123
BtsI	GCAGTG	1 cut(s)	353
BtsIMutI	CAGTG	5 cut(s)	243, 353, 391, 762, 1094
Cac8I	GCNNGC	2 cut(s)	137, 846
CaiI	CAGNNNCTG	2 cut(s)	1203, 1453
CciI	TCATGA	2 cut(s)	81, 987
CfoI	GCGC	3 cut(s)	266, 1245, 1371
Cfr13I	GGNCC	3 cut(s)	106, 121, 779
ClaI	ATCGAT	3 cut(s)	144, 183, 735
CseI	GACGC	2 cut(s)	19, 118
Csp6I	GTAC	6 cut(s)	115, 472, 541, 831, 1135, 1390
CspCI	CAANNNNNGTGG	2 cut(s)	1083, 1118
CviAII	CATG	6 cut(s)	82, 422, 710, 988, 1154, 1253
CviQI	GTAC	6 cut(s)	115, 472, 541, 831, 1135, 1390
DinI	GGCGCC	2 cut(s)	1244, 1370
Eam1104I	CTCTTC	4 cut(s)	645, 1029, 1328, 1380
EarI	CTCTTC	4 cut(s)	645, 1029, 1328, 1380
EciI	GGCGGA	1 cut(s)	122
Eco130I	CCWWGG	1 cut(s)	1267
Eco47I	GGWCC	2 cut(s)	106, 779
Eco57I	CTGAAG	2 cut(s)	545, 839
Eco72I	CACGTG	1 cut(s)	29
Eco88I	CYCGRG	1 cut(s)	321
EcoNI	CCTNNNNNAGG	1 cut(s)	866
EcoO109I	RGGNCCY	1 cut(s)	779
EcoRI	GAATTC	1 cut(s)	1169
EcoRII	CCWGG	1 cut(s)	117
EcoT14I	CCWWGG	1 cut(s)	1267
EgeI	GGCGCC	2 cut(s)	1244, 1370
EheI	GGCGCC	2 cut(s)	1244, 1370
ErhI	CCWWGG	1 cut(s)	1267
FaeI	CATG	6 cut(s)	85, 425, 713, 991, 1157, 1256
FalI	AAGNNNNNCTT	4 cut(s)	95, 127, 342, 374
FaqI	GGGAC	1 cut(s)	1221
FatI	CATG	6 cut(s)	81, 421, 709, 987, 1153, 1252
FauI	CCCGC	1 cut(s)	1181
FblI	GTMKAC	1 cut(s)	8
FokI	GGATG	3 cut(s)	297, 693, 1130
FspBI	CTAG	1 cut(s)	803
GlaI	GCGC	3 cut(s)	265, 1244, 1370
GsuI	CTGGAG	3 cut(s)	38, 77, 902
HaeII	RGCGCY	2 cut(s)	1246, 1372
HaeIII	GGCC	3 cut(s)	123, 234, 1052
HapII	CCGG	1 cut(s)	1373
HgaI	GACGC	2 cut(s)	19, 118
HhaI	GCGC	3 cut(s)	266, 1245, 1371
Hin1I	GRCGYC	2 cut(s)	1243, 1369
Hin1II	CATG	6 cut(s)	85, 425, 713, 991, 1157, 1256
Hin6I	GCGC	3 cut(s)	264, 1243, 1369
HinP1I	GCGC	3 cut(s)	264, 1243, 1369
HincII	GTYRAC	1 cut(s)	9
HindII	GTYRAC	1 cut(s)	9
HindIII	AAGCTT	2 cut(s)	396, 1148
HinfI	GANTC	2 cut(s)	289, 511
HpaII	CCGG	1 cut(s)	1373
HphI	GGTGA	2 cut(s)	145, 293
Hpy166II	GTNNAC	2 cut(s)	9, 1360
Hpy188I	TCNGA	2 cut(s)	230, 576
Hpy8I	GTNNAC	2 cut(s)	9, 1360
Hpy99I	CGWCG	2 cut(s)	10, 13
HpyAV	CCTTC	3 cut(s)	67, 202, 625
HpyCH4III	ACNGT	3 cut(s)	757, 835, 1199
HpyCH4IV	ACGT	4 cut(s)	28, 255, 1007, 1210
HpyCH4V	TGCA	6 cut(s)	32, 421, 607, 848, 947, 1441
HpyF10VI	GCNNNNNNNGC	8 cut(s)	19, 58, 61, 108, 947, 1147, 1249, 1258
HpySE526I	ACGT	4 cut(s)	28, 255, 1007, 1210
Hsp92I	GRCGYC	2 cut(s)	1243, 1369
Hsp92II	CATG	6 cut(s)	85, 425, 713, 991, 1157, 1256
HspAI	GCGC	3 cut(s)	264, 1243, 1369
KasI	GGCGCC	2 cut(s)	1242, 1368
LguI	GCTCTTC	1 cut(s)	645
LmnI	GCTCC	4 cut(s)	19, 49, 58, 955
Lsp1109I	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1453
LweI	GCATC	3 cut(s)	319, 322, 815
MaeI	CTAG	1 cut(s)	803
MaeII	ACGT	4 cut(s)	28, 255, 1007, 1210
MaeIII	GTNAC	3 cut(s)	1064, 1199, 1406
MbiI	CCGCTC	2 cut(s)	52, 61
MfeI	CAATTG	1 cut(s)	1308
MflI	RGATCY	2 cut(s)	610, 1375
MluCI	AATT	8 cut(s)	445, 452, 644, 1017, 1100, 1169, 1192, 1308
Mly113I	GGCGCC	2 cut(s)	1243, 1369
MmeI	TCCRAC	1 cut(s)	870
MroXI	GAANNNNTTC	1 cut(s)	77
MseI	TTAA	5 cut(s)	360, 444, 675, 1233, 1459
MslI	CAYNNNNRTG	1 cut(s)	1251
MspA1I	CMGCKG	1 cut(s)	139
MspCI	CTTAAG	1 cut(s)	359
MspI	CCGG	1 cut(s)	1373
MspR9I	CCNGG	2 cut(s)	119, 1373
MunI	CAATTG	1 cut(s)	1308
MvaI	CCWGG	1 cut(s)	119
MvnI	CGCG	2 cut(s)	129, 919
MwoI	GCNNNNNNNGC	8 cut(s)	19, 58, 61, 108, 947, 1147, 1249, 1258
NarI	GGCGCC	2 cut(s)	1243, 1369
NciI	CCSGG	1 cut(s)	1373
NlaIII	CATG	6 cut(s)	85, 425, 713, 991, 1157, 1256
NlaIV	GGNNCC	5 cut(s)	250, 369, 780, 1244, 1370
NmuCI	GTSAC	1 cut(s)	1064
NspI	RCATGY	1 cut(s)	713
PagI	TCATGA	2 cut(s)	81, 987
PciSI	GCTCTTC	1 cut(s)	645
PdmI	GAANNNNTTC	1 cut(s)	77
PfeI	GAWTC	2 cut(s)	289, 511
PluTI	GGCGCC	2 cut(s)	1246, 1372
PmaCI	CACGTG	1 cut(s)	29
PmlI	CACGTG	1 cut(s)	29
Ppu21I	YACGTR	1 cut(s)	29
PpuMI	RGGWCCY	1 cut(s)	779
PshBI	ATTAAT	1 cut(s)	444
Psp1406I	AACGTT	1 cut(s)	255
Psp5II	RGGWCCY	1 cut(s)	779
Psp6I	CCWGG	1 cut(s)	117
PspCI	CACGTG	1 cut(s)	29
PspGI	CCWGG	1 cut(s)	117
PspN4I	GGNNCC	5 cut(s)	250, 369, 780, 1244, 1370
PspPI	GGNCC	3 cut(s)	106, 121, 779
PspPPI	RGGWCCY	1 cut(s)	779
PstI	CTGCAG	2 cut(s)	949, 1443
PstNI	CAGNNNCTG	2 cut(s)	1203, 1453
PsuI	RGATCY	2 cut(s)	610, 1375
PvuII	CAGCTG	1 cut(s)	139
RsaI	GTAC	6 cut(s)	116, 473, 542, 832, 1136, 1391
RsaNI	GTAC	6 cut(s)	115, 472, 541, 831, 1135, 1390
RseI	CAYNNNNRTG	1 cut(s)	1251
SalI	GTCGAC	1 cut(s)	7
SapI	GCTCTTC	1 cut(s)	645
SaqAI	TTAA	5 cut(s)	360, 444, 675, 1233, 1459
Sau96I	GGNCC	3 cut(s)	106, 121, 779
ScaI	AGTACT	1 cut(s)	473
ScrFI	CCNGG	2 cut(s)	119, 1373
SfaNI	GCATC	3 cut(s)	319, 322, 815
SfcI	CTRYAG	2 cut(s)	945, 1439
SfoI	GGCGCC	2 cut(s)	1244, 1370
SgrDI	CGTCGACG	1 cut(s)	7
SinI	GGWCC	2 cut(s)	106, 779
SmiMI	CAYNNNNRTG	1 cut(s)	1251
SmlI	CTYRAG	1 cut(s)	359
SmoI	CTYRAG	1 cut(s)	359
Sse9I	AATT	8 cut(s)	445, 452, 644, 1017, 1100, 1169, 1192, 1308
SsiI	CCGC	8 cut(s)	52, 61, 92, 109, 127, 133, 221, 1188
SspDI	GGCGCC	2 cut(s)	1242, 1368
SspMI	CTAG	1 cut(s)	803
StyD4I	CCNGG	2 cut(s)	117, 1371
StyI	CCWWGG	1 cut(s)	1267
TaaI	ACNGT	3 cut(s)	757, 835, 1199
TaiI	ACGT	4 cut(s)	31, 258, 1010, 1213
TaqI	TCGA	8 cut(s)	8, 144, 183, 378, 486, 721, 735, 1221
TasI	AATT	8 cut(s)	445, 452, 644, 1017, 1100, 1169, 1192, 1308
TatI	WGTACW	2 cut(s)	471, 540
TauI	GCSGC	4 cut(s)	55, 64, 94, 224
TfiI	GAWTC	2 cut(s)	289, 511
Tru1I	TTAA	5 cut(s)	360, 444, 675, 1233, 1459
Tru9I	TTAA	5 cut(s)	360, 444, 675, 1233, 1459
TscAI	CASTG	5 cut(s)	250, 360, 391, 762, 1101
TseFI	GTSAC	1 cut(s)	1064
TseI	GCWGC	7 cut(s)	13, 32, 841, 941, 944, 947, 1441
Tsp45I	GTSAC	1 cut(s)	1064
TspDTI	ATGAA	7 cut(s)	70, 98, 438, 1004, 1026, 1089, 1142
TspGWI	ACGGA	1 cut(s)	1122
TspRI	CASTG	5 cut(s)	250, 360, 391, 762, 1101
Vha464I	CTTAAG	1 cut(s)	359
VpaK11BI	GGWCC	2 cut(s)	106, 779
VspI	ATTAAT	1 cut(s)	444
XagI	CCTNNNNNAGG	1 cut(s)	866
XapI	RAATTY	3 cut(s)	452, 644, 1169
XceI	RCATGY	1 cut(s)	713
XcmI	CCANNNNNNNNNTGG	1 cut(s)	242
XmiI	GTMKAC	1 cut(s)	8
XmnI	GAANNNNTTC	1 cut(s)	77
XspI	CTAG	1 cut(s)	803
ZrmI	AGTACT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.