pycom02g00880
ERF Family

Calcineurin-like metallo-phosphoesterase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0010859
Physical Location & Seq
Forward (+)
527850 .. 530628
2779 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g00880.2

Sequence Viewer

Length: 897 bp
ATGGAGAAAAAACCCACTTGGGTTCTTACACTGGTGACGCAGGTGAGTCTATGCTTTTGTCTCTACCTTGCTTTTCAGCTGGGTCAGCCTCGGAGCTCTGTCCGCCATTGCAGAAGTGAGAGGAGGCCGCTGGATCTTTACTTCATCAGCGTCGGAGGAGGATTCCGGCCTCCCACCCGACAGACCCATCTTCTCAAACAGATGGAGAAGGTGGCAAACAAGTACAAGGCAGAGTTTGTGGTGGACGTTAGCGATCTTGGGGAAGATGATCCGCTCATGCAGAATGGCACCCTCCATTTCTCGACACTGAAAGTTCCCTGGTACACAACCAGAGTTTCGGAAGGAAAAGGAGGAGGTTACTTCCAAAAGAAGATTAAGTTACCTTACGAGAAAACCTTGGATGTCATTGTGGTGGATACTGGATTATTTCAGAATTTGACCACGGGATCATTAAGCGAAGTTGGAAACGATCAGTTACATTGGCTGAGAAGGACACTAGAGTCAACCCGTAGTAACTGGCGCGTAGTTGTTGGATTCCATTCACTGGCTATTTGTGAAGATGGTGAGGAGAGAATGGAAGCAACGCAAGTTTTCGAGTCTCTACAAAGTACTTTCACGAAATTTGAAGTGAACGCATACTTAAGCGGGCAGGGTTGCGTTAGCAGCCCCCGATTAAGTGGTCTGAGCTACATCAGGAACCCGGGCAAAATGGCAGCGGGTGCTTATCTTGCTTCCGTAAATGAAACATCAGCATCTAGAAGAAAATTGGAAGACGGGTTTTTTCTTCATAGAGTCGGCTCATTAGAGATTGAAACCTGCTTTGTTACATCAGCTGGAGAAGTTGTGCATAGATCGATCATCCATCAGAGAGGAAAGGATCGATCATGTAAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

299

Amino Acids

33.57

Weight (kDa)

9.01

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G30993 AT4G30993 AT4G30993
fragaria_vesca FvH4_1g01190 FvH4_1g01190
malus_domestica MD02G1010000.v1.1 MD02G1010100.v1.1
prunus_persica Prupe.7G260000_v2.0.a1
pyrus_communis pycom02g00880 pycom15g13910
rosa_chinensis RchiOBHm_Chr2g0085991
rosa_laevigata RLG00000015732
rosa_multiflora Rmu_ssc0000355.1_g000024
rosa_roxburghii Rroxscaffold_2G00154870
rosa_rugosa Rorug01G0464900
rosa_samantha Rh2AG014100 Rh2BG014600 Rh2CG015100 Rh2DG016400
rosa_wichuraiana Rw2G001250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 31
AasI GACNNNNNNGTC 1 cut(s) 499
Acc36I ACCTGC 2 cut(s) 31, 824
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 544
AccBSI CCGCTC 1 cut(s) 274
AccII CGCG 1 cut(s) 522
AciI CCGC 5 cut(s) 103, 128, 272, 645, 716
AclWI GGATC 4 cut(s) 141, 263, 454, 885
AcsI RAATTY 2 cut(s) 433, 620
AfaI GTAC 3 cut(s) 224, 323, 610
AfiI CCNNNNNNNGG 1 cut(s) 544
AflII CTTAAG 1 cut(s) 640
AgsI TTSAA 2 cut(s) 626, 812
AjnI CCWGG 1 cut(s) 317
AluBI AGCT 4 cut(s) 79, 96, 687, 833
AluI AGCT 4 cut(s) 79, 96, 687, 833
Alw21I GWGCWC 1 cut(s) 98
Alw26I GTCTC 2 cut(s) 65, 603
AlwI GGATC 4 cut(s) 141, 263, 454, 885
Ama87I CYCGRG 1 cut(s) 700
AoxI GGCC 2 cut(s) 125, 167
ApeKI GCWGC 2 cut(s) 663, 713
ApoI RAATTY 2 cut(s) 433, 620
AspLEI GCGC 1 cut(s) 522
AsuC2I CCSGG 2 cut(s) 701, 702
AsuHPI GGTGA 3 cut(s) 46, 55, 575
AvaI CYCGRG 1 cut(s) 700
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 1 cut(s) 98
BbsI GAAGAC 1 cut(s) 777
Bbv12I GWGCWC 1 cut(s) 98
BbvI GCAGC 2 cut(s) 675, 725
BccI CCATC 4 cut(s) 195, 196, 554, 870
BciT130I CCWGG 1 cut(s) 319
BciVI GTATCC 1 cut(s) 409
BcnI CCSGG 2 cut(s) 701, 702
BcoDI GTCTC 2 cut(s) 65, 603
BfaI CTAG 2 cut(s) 497, 756
BfrI CTTAAG 1 cut(s) 640
BfuAI ACCTGC 2 cut(s) 31, 824
BfuI GTATCC 1 cut(s) 409
BisI GCNGC 3 cut(s) 128, 664, 714
BlsI GCNGC 3 cut(s) 129, 665, 715
BmcAI AGTACT 1 cut(s) 610
Bme1390I CCNGG 3 cut(s) 319, 701, 702
BmeT110I CYCGRG 1 cut(s) 700
BmiI GGNNCC 2 cut(s) 289, 698
BmrFI CCNGG 3 cut(s) 319, 701, 702
BmsI GCATC 1 cut(s) 761
BpiI GAAGAC 1 cut(s) 777
BpmI CTGGAG 1 cut(s) 855
BpuMI CCSGG 2 cut(s) 701, 702
Bsa29I ATCGAT 2 cut(s) 854, 880
BsaJI CCNNGG 5 cut(s) 89, 317, 396, 441, 700
BsaXI ACNNNNNCTCC 2 cut(s) 828, 858
Bsc4I CCNNNNNNNGG 1 cut(s) 544
Bse1I ACTGG 4 cut(s) 36, 424, 521, 549
Bse3DI GCAATG 1 cut(s) 106
BseBI CCWGG 1 cut(s) 319
BseCI ATCGAT 2 cut(s) 854, 880
BseDI CCNNGG 5 cut(s) 89, 317, 396, 441, 700
BseGI GGATG 2 cut(s) 406, 858
BseLI CCNNNNNNNGG 1 cut(s) 544
BseMI GCAATG 1 cut(s) 106
BseMII CTCAG 2 cut(s) 476, 674
BseNI ACTGG 4 cut(s) 36, 424, 521, 549
BseRI GAGGAG 4 cut(s) 136, 171, 366, 581
BseXI GCAGC 2 cut(s) 675, 725
BseYI CCCAGC 1 cut(s) 79
Bsh1236I CGCG 1 cut(s) 522
BshFI GGCC 2 cut(s) 127, 169
BshNI GGYRCC 1 cut(s) 287
BshVI ATCGAT 2 cut(s) 854, 880
BsiHKAI GWGCWC 1 cut(s) 98
BsiHKCI CYCGRG 1 cut(s) 700
BsiSI CCGG 2 cut(s) 166, 701
BslI CCNNNNNNNGG 1 cut(s) 544
BsmAI GTCTC 2 cut(s) 65, 603
BsnI GGCC 2 cut(s) 127, 169
BsoBI CYCGRG 1 cut(s) 700
Bsp1286I GDGCHC 1 cut(s) 98
Bsp143I GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
BspACI CCGC 5 cut(s) 103, 128, 272, 645, 716
BspANI GGCC 2 cut(s) 127, 169
BspCNI CTCAG 2 cut(s) 477, 675
BspDI ATCGAT 2 cut(s) 854, 880
BspFNI CGCG 1 cut(s) 522
BspLI GGNNCC 2 cut(s) 289, 698
BspMI ACCTGC 2 cut(s) 31, 824
BspPI GGATC 4 cut(s) 141, 263, 454, 885
BspT107I GGYRCC 1 cut(s) 287
BspTI CTTAAG 1 cut(s) 640
BsrBI CCGCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 106
BsrI ACTGG 4 cut(s) 36, 424, 521, 549
BssECI CCNNGG 5 cut(s) 89, 317, 396, 441, 700
BssMI GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
BssT1I CCWWGG 1 cut(s) 396
Bst2UI CCWGG 1 cut(s) 319
BstAFI CTTAAG 1 cut(s) 640
BstAPI GCANNNNNTGC 1 cut(s) 719
BstC8I GCNNGC 1 cut(s) 647
BstDEI CTNAG 2 cut(s) 485, 683
BstDSI CCRYGG 1 cut(s) 441
BstF5I GGATG 2 cut(s) 406, 858
BstFNI CGCG 1 cut(s) 522
BstHHI GCGC 1 cut(s) 522
BstKTI GATC 9 cut(s) 136, 256, 271, 449, 472, 854, 858, 880, 884
BstMAI GTCTC 2 cut(s) 65, 603
BstMBI GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
BstMWI GCNNNNNNNGC 5 cut(s) 85, 102, 663, 719, 728
BstNI CCWGG 1 cut(s) 319
BstSCI CCNGG 3 cut(s) 317, 699, 700
BstUI CGCG 1 cut(s) 522
BstV1I GCAGC 2 cut(s) 675, 725
BstV2I GAAGAC 1 cut(s) 777
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
Bsu15I ATCGAT 2 cut(s) 854, 880
BsuI GTATCC 1 cut(s) 409
BsuRI GGCC 2 cut(s) 127, 169
BsuTUI ATCGAT 2 cut(s) 854, 880
BtgI CCRYGG 1 cut(s) 441
BtsCI GGATG 2 cut(s) 406, 858
BtsIMutI CAGTG 3 cut(s) 29, 305, 542
BveI ACCTGC 2 cut(s) 31, 824
Cac8I GCNNGC 1 cut(s) 647
CfoI GCGC 1 cut(s) 522
Cfr9I CCCGGG 1 cut(s) 700
ClaI ATCGAT 2 cut(s) 854, 880
CseI GACGC 2 cut(s) 46, 139
Csp6I GTAC 3 cut(s) 223, 322, 609
CviAII CATG 2 cut(s) 277, 885
CviQI GTAC 3 cut(s) 223, 322, 609
DdeI CTNAG 2 cut(s) 485, 683
DpnI GATC 9 cut(s) 135, 255, 270, 448, 471, 853, 857, 879, 883
DpnII GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
DrdI GACNNNNNNGTC 1 cut(s) 499
DseDI GACNNNNNNGTC 1 cut(s) 499
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 96
Eco130I CCWWGG 1 cut(s) 396
Eco24I GRGCYC 1 cut(s) 98
Eco53kI GAGCTC 1 cut(s) 96
Eco88I CYCGRG 1 cut(s) 700
EcoICRI GAGCTC 1 cut(s) 96
EcoRII CCWGG 1 cut(s) 317
EcoT14I CCWWGG 1 cut(s) 396
EcoT38I GRGCYC 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 396
FaeI CATG 2 cut(s) 280, 888
FaiI YATR 6 cut(s) 52, 278, 637, 789, 849, 886
FatI CATG 2 cut(s) 276, 884
FauI CCCGC 2 cut(s) 638, 709
Fnu4HI GCNGC 3 cut(s) 128, 664, 714
FokI GGATG 2 cut(s) 413, 845
FriOI GRGCYC 1 cut(s) 98
Fsp4HI GCNGC 3 cut(s) 128, 664, 714
FspBI CTAG 2 cut(s) 497, 756
GlaI GCGC 1 cut(s) 521
GluI GCNGC 3 cut(s) 128, 664, 714
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 1 cut(s) 855
HaeIII GGCC 2 cut(s) 127, 169
HapII CCGG 2 cut(s) 166, 701
HgaI GACGC 2 cut(s) 46, 139
HhaI GCGC 1 cut(s) 522
Hin1II CATG 2 cut(s) 280, 888
Hin6I GCGC 1 cut(s) 520
HinP1I GCGC 1 cut(s) 520
HincII GTYRAC 1 cut(s) 504
HindII GTYRAC 1 cut(s) 504
HinfI GANTC 6 cut(s) 46, 162, 500, 534, 596, 792
HpaII CCGG 2 cut(s) 166, 701
HphI GGTGA 3 cut(s) 46, 55, 575
Hpy166II GTNNAC 4 cut(s) 244, 324, 504, 631
Hpy188I TCNGA 6 cut(s) 93, 155, 340, 432, 684, 867
Hpy188III TCNNGA 4 cut(s) 301, 616, 694, 756
Hpy8I GTNNAC 4 cut(s) 244, 324, 504, 631
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 3 cut(s) 202, 335, 483
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 3 cut(s) 111, 280, 847
HpyF10VI GCNNNNNNNGC 5 cut(s) 85, 102, 663, 719, 728
HpyF3I CTNAG 2 cut(s) 485, 683
HpySE526I ACGT 1 cut(s) 246
Hsp92II CATG 2 cut(s) 280, 888
HspAI GCGC 1 cut(s) 520
Kzo9I GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
LmnI GCTCC 1 cut(s) 93
Lsp1109I GCAGC 2 cut(s) 675, 725
LweI GCATC 1 cut(s) 761
MaeI CTAG 2 cut(s) 497, 756
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 6 cut(s) 34, 356, 378, 474, 512, 823
MalI GATC 9 cut(s) 135, 255, 270, 448, 471, 853, 857, 879, 883
MbiI CCGCTC 1 cut(s) 274
MboI GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
MboII GAAGA 7 cut(s) 182, 275, 382, 569, 771, 776, 782
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 1 cut(s) 98
MluCI AATT 4 cut(s) 433, 620, 764, 890
MlyI GAGTC 4 cut(s) 55, 509, 605, 801
MmeI TCCRAC 3 cut(s) 133, 442, 511
MseI TTAA 4 cut(s) 375, 452, 641, 674
MslI CAYNNNNRTG 1 cut(s) 410
MspA1I CMGCKG 4 cut(s) 79, 130, 716, 833
MspCI CTTAAG 1 cut(s) 640
MspI CCGG 2 cut(s) 166, 701
MspR9I CCNGG 3 cut(s) 319, 701, 702
MvaI CCWGG 1 cut(s) 319
MvnI CGCG 1 cut(s) 522
MwoI GCNNNNNNNGC 5 cut(s) 85, 102, 663, 719, 728
NciI CCSGG 2 cut(s) 701, 702
NdeII GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
NlaIII CATG 2 cut(s) 280, 888
NlaIV GGNNCC 2 cut(s) 289, 698
NmuCI GTSAC 1 cut(s) 34
PaqCI CACCTGC 1 cut(s) 31
PfeI GAWTC 2 cut(s) 162, 534
PflMI CCANNNNNTGG 1 cut(s) 544
PkrI GCNGC 3 cut(s) 129, 665, 715
PleI GAGTC 4 cut(s) 54, 508, 604, 800
PpsI GAGTC 4 cut(s) 54, 508, 604, 800
Psp124BI GAGCTC 1 cut(s) 98
Psp6I CCWGG 1 cut(s) 317
PspFI CCCAGC 1 cut(s) 79
PspGI CCWGG 1 cut(s) 317
PspN4I GGNNCC 2 cut(s) 289, 698
PsuI RGATCY 1 cut(s) 133
PvuII CAGCTG 2 cut(s) 79, 833
RsaI GTAC 3 cut(s) 224, 323, 610
RsaNI GTAC 3 cut(s) 223, 322, 609
RseI CAYNNNNRTG 1 cut(s) 410
SacI GAGCTC 1 cut(s) 98
SaqAI TTAA 4 cut(s) 375, 452, 641, 674
SatI GCNGC 3 cut(s) 128, 664, 714
Sau3AI GATC 9 cut(s) 133, 253, 268, 446, 469, 851, 855, 877, 881
ScaI AGTACT 1 cut(s) 610
SchI GAGTC 4 cut(s) 55, 509, 605, 801
ScrFI CCNGG 3 cut(s) 319, 701, 702
SduI GDGCHC 1 cut(s) 98
SfaNI GCATC 1 cut(s) 761
SmaI CCCGGG 1 cut(s) 702
SmiMI CAYNNNNRTG 1 cut(s) 410
SmlI CTYRAG 1 cut(s) 640
SmoI CTYRAG 1 cut(s) 640
Sse9I AATT 4 cut(s) 433, 620, 764, 890
SsiI CCGC 5 cut(s) 103, 128, 272, 645, 716
SspMI CTAG 2 cut(s) 497, 756
SstI GAGCTC 1 cut(s) 98
StyD4I CCNGG 3 cut(s) 317, 699, 700
StyI CCWWGG 1 cut(s) 396
TaiI ACGT 1 cut(s) 249
TaqI TCGA 4 cut(s) 302, 594, 854, 880
TasI AATT 4 cut(s) 433, 620, 764, 890
TatI WGTACW 2 cut(s) 222, 608
TauI GCSGC 1 cut(s) 130
TfiI GAWTC 2 cut(s) 162, 534
Tru1I TTAA 4 cut(s) 375, 452, 641, 674
Tru9I TTAA 4 cut(s) 375, 452, 641, 674
TscAI CASTG 3 cut(s) 36, 312, 549
TseFI GTSAC 1 cut(s) 34
TseI GCWGC 2 cut(s) 663, 713
Tsp45I GTSAC 1 cut(s) 34
TspDTI ATGAA 3 cut(s) 133, 756, 776
TspGWI ACGGA 1 cut(s) 724
TspMI CCCGGG 1 cut(s) 700
TspRI CASTG 3 cut(s) 36, 312, 549
Van91I CCANNNNNTGG 1 cut(s) 544
Vha464I CTTAAG 1 cut(s) 640
XapI RAATTY 2 cut(s) 433, 620
XbaI TCTAGA 1 cut(s) 755
XmaI CCCGGG 1 cut(s) 700
XspI CTAG 2 cut(s) 497, 756
ZrmI AGTACT 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.