Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0014543

Physical Location & Seq

Genomic Coordinates Reverse (-)

627036 .. 630387

Gene Structure 3352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g01130.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3006 bp

ATGTTTTCTCACTCGACTCTCACACAAAAACAGACTTCCATAATATCTGACACATTTTTCTTCCAATCGGGCATCCAAAATTGTCTGTTCTCTCAGTCATCCCAACTGCAAGTTCCAATGGAGATTTTCCATTCCTCCTTCTACTTAATCCTTCTCCTCCTCTTCGCGGCGGTTTCCGCCGCCGATATCTACTCAGACACCCTTCTCAGCTTAAAATCCGAGCTCACAGACGCCAATGGCAGCTTGAAAGATTGGATTCTCCCTTCTACAGAAAACCCACCTGGCAAAATCCACGCATGTTCTTGGTCCGGCGTCAAATGCAACACCAACAACTCCGCCGTCACTGGCTTAGACCTCTCAATAAAGAGTCTCGCCGGTGAAATGTCCGGCGATCAATTCGCCGTCTTCGCCGACCTTGTATCACTCAATCTCAGTCAAAACTCGTTCTCCGGTCACCTCCCCGCTGGAATCTTCAACCTCACCAACCTCACAACATTAGACATCAGCAGAAACAACTTCTCCGGCCACTTCCCCACCGGCGTCTCCACCCTCCAAAACCTCATTGTACTCGACGCATTCAGCAACAGCTTTTCCGGGTCGCTCCCCGCCGAAATTTCAGACCTTCAGAACCTCAAAATCCTCAATTTAGCCGGAAGCTACTTCCGGGGACCGATCCCGTCGGAATACGGGGCTTTTCGCCGGCTCGAGTTTATTCATCTCGCCGGGAATATGATCACCGGAAGCATTCCGCCGGAACTGGGGAAGCTCAAAACAGTGACCCACATGGAGATTGGCTACAATTTTTACCACGGAAGCATTCCGTGGCAATTGGGGAACATGACAGAGCTCCAGTATCTCGACATTGCCTATGCAAATCTCTCCGGCGCCGTCCCAAAATCCCTCGGCGATCTCGACAATCTCGAATCCCTCTTCCTTTTCAGAAACCAGCTTTCTGGGTCAATTCCGCCTGAGCTCAGCAACATCAGAGCTCTCCAAAGCTTGGATCTTTCGGACAATCTGATTTCTGGGTGGATCCCAGAAACCTTTTCGGAGCTGAAAAACCTTAGACTCCTCAGTCTTTTTTACAACGAGATGAGCGGCGAAGTTCCTGACGGAATTGCAGAGCTTCCGTCTTTGGAGACGCTGCTTTTGTGGAACAATTTCTTCTCCGGCAACCTTCCCCGGAGCTTGGGGAGGAACTCGAAGCTCGGATGGGTGGACGTCTCCACAAACAACTTCAACGGCAGCGTTCCGCCGGATATCTGTGCGAATGGTCAGCTCCTTAAGCTGATGCTGTTTTCGAACAATTTCTCCGGCGATCTCTCCACTTCTCTGTCAAACTGTTCGTCTCTGGTTCGTCTTCGACTCGAAGATAACAAGTTTTCAGGTGAGATTCCATTGAAATTCAGCACTCTGACTGACATCACATATGTTGATTTATCTGGGAACAATTTTAGTGGTGGGATTCCAATGGATATTTCAAAAGCTCAAAAGCTTGAGTACTTCAATGTCTCTAGAAATCCAGAATTAGGGGGCACAGTTCCTGCAGAAATGTTGGAATTGCCAAATCTTCACAATTTTTCGGCTTCCTCGTGTGGCTTGATTGGCAATGTTCCTTCGTTCGAAAACTGCAAATCAATATCTGTTGTTGAATTGAGCAAGAACAGCTTGGAAGGAACTGTCCCAAAAAGTATTTCTAGCTGCCGGGTTCTTGAGAGGATTGATTTAGGTAGCAATAATATATCCGGTCGTATACCCAAGGAGCTTGCAAGTCTCCCTGCTCTTCTTGTTCTTGACCTGTCACATAACAGCTTCAATGGACCAATACCTAAAACTTTTGGTTCTTCTTCGAGTTTAGTACTTCTAAATGTGTCTTACAATGATGTTTCCGGGAGTATTCCATCCGAAAAGGTATTTAGAATGATGGAACGAAGCGCTTTTGATGGGAATCCAAAGCTGTGTGGAGAGCCTCTCAGATCATGTCCTGGCTCAGTGTCCATATTTGGAAGCAGAGTTGCCGGGAAGCTTCTGTGGATCGCACTACTCTGCATCGGAGTAGTTATGTTCGTTACTCTATCAGTTATGGGGATATTTTACTACCATAAAGGCAGCAAGGGCCAGTGGAAGATGATCTCATTTGCTGGACTTCCTCAATTCACAAAAAATGATTTATTGAAGAGCTTCAGTTCGACAGAATCCATGGATGCATTGCCACCTTTGTCAGCTTCAGTGCGGAAAGCAGTTCTGCCAATGGGAATTGCAGTTTCGGTAAAGAAGATTGAATGGGGAGCAAAGAGAATGAGAGTTATGCTGGAATTTGTAACACAAATAGGAAATGCAAGGCATAAGAATTTAATTCGATTGCTTGGAGTTTGCTACAACAACCATCTGGCTTATCTCTTATACGATTACTTGCCCAATGGAAACTTGGCTGAAATGATAAGTGTGAAAAGCGAATGGGCAGCCAAGTACAAAATTATCATCGACATTGCAAAGGGATTATGCTTCCTTCACCATGAATGTTATCCTGCAATAGCACATGGAGATCTGAGATCAAGTAATATAGTGTTTGACGAAAATATGGAACCTCATTTGACAGAATTCGGGTTCAAGCATCTGCTCGAGTTGAGCAAGGGTTCGTTTACAGCAGCAACTTCCACCTGGGATGCAGGTGATAACATCAGTGGCACAAAAGAGGAGCTATGCAGGGATGTATACAGCTTTGGGGAGATCATGCTGGAGATTCTAAGCAACGGCAGGTTGACAAATTCTGGCGCAAGCATACAGAGCAAGTCGAGGGAAGTTGTTCTGCGGGAAATTTACAACGAGAACGAAGCTGGTTCCGACATTTCAATGCAAGAGGAGATAAAACTGGCAATTGAGGTTGCTATGCTTTGCACCAGGAGTAGGCCATCCGATCGACCATCCATGGAAAATGCATTGAAGCTTTTATCCGAGTCGAAACTCCAGATGAAAAATAACCCAACTTTTGAAACTGCAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010016 GO:0010065 GO:0010067 GO:0010087 GO:0010089 GO:0010154 GO:0010223 GO:0010346 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0044464 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071944 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1002

Amino Acids

109.62

Weight (kDa)

5.68

Isoelectric Point (pI)

35.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51350
fragaria_vesca	FvH4_1g01520
malus_domestica	MD02G1012000.v1.1 MD15G1157800.v1.1
prunus_persica	Prupe.7G253000_v2.0.a1
pyrus_communis	pycom02g01130 pycom15g14160
rosa_chinensis	RchiOBHm_Chr2g0086441
rosa_laevigata	RLG00000015759
rosa_multiflora	Rmu_sc0005127.1_g000003
rosa_roxburghii	Rroxscaffold_2G00154570
rosa_rugosa	Rorug01G0467300
rosa_samantha	Rh2AG018100 Rh2BG017600 Rh2CG018500 Rh2DG019400
rosa_wichuraiana	Rw2G001500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2660
AasI	GACNNNNNNGTC	1 cut(s)	1074
AatII	GACGTC	1 cut(s)	1224
Acc36I	ACCTGC	2 cut(s)	2660, 2748
AccB1I	GGYRCC	1 cut(s)	884
AccB7I	CCANNNNNTGG	1 cut(s)	1000
AccBSI	CCGCTC	1 cut(s)	1098
AccI	GTMKAC	2 cut(s)	1753, 2715
AccII	CGCG	1 cut(s)	167
AclWI	GGATC	5 cut(s)	667, 1011, 1027, 1040, 2042
AcoI	YGGCCR	1 cut(s)	523
AcsI	RAATTY	7 cut(s)	612, 1403, 2315, 2350, 2600, 2767, 2817
AcuI	CTGAAG	3 cut(s)	608, 2167, 2211
AcyI	GRCGYC	5 cut(s)	231, 312, 540, 885, 1221
AfaI	GTAC	4 cut(s)	567, 1502, 1860, 2471
AfeI	AGCGCT	1 cut(s)	1936
AfiI	CCNNNNNNNGG	6 cut(s)	166, 758, 1000, 1189, 1529, 2907
AflII	CTTAAG	1 cut(s)	1283
AjnI	CCWGG	4 cut(s)	280, 1984, 2660, 2900
AjuI	GAANNNNNNNTTGG	6 cut(s)	96, 128, 1462, 1494, 1678, 1710
AloI	GAACNNNNNNTCC	2 cut(s)	1295, 1327
Alw21I	GWGCWC	4 cut(s)	225, 849, 975, 991
Alw26I	GTCTC	7 cut(s)	374, 547, 1133, 1228, 1353, 1516, 1778
AlwI	GGATC	5 cut(s)	667, 1011, 1027, 1040, 2042
AlwNI	CAGNNNCTG	1 cut(s)	1544
Ama87I	CYCGRG	2 cut(s)	704, 2621
Aor51HI	AGCGCT	1 cut(s)	1936
AoxI	GGCC	3 cut(s)	523, 2116, 2909
ApeKI	GCWGC	7 cut(s)	240, 1144, 1245, 1701, 2109, 2462, 2648
ApoI	RAATTY	7 cut(s)	612, 1403, 2315, 2350, 2600, 2767, 2817
ArsI	GACNNNNNNTTYG	4 cut(s)	1132, 1164, 1331, 1363
Asp700I	GAANNNNTTC	4 cut(s)	1160, 1307, 2180, 2805
AspLEI	GCGC	3 cut(s)	887, 1937, 2777
AspS9I	GGNCC	4 cut(s)	306, 668, 1820, 2116
AsuC2I	CCSGG	7 cut(s)	595, 665, 724, 1183, 1706, 1891, 2020
AsuHPI	GGTGA	7 cut(s)	389, 446, 472, 727, 1400, 2504, 2684
AsuII	TTCGAA	2 cut(s)	1301, 1623
AvaI	CYCGRG	2 cut(s)	704, 2621
AvaII	GGWCC	3 cut(s)	306, 668, 1820
BaeGI	GKGCMC	1 cut(s)	1538
BamHI	GGATCC	1 cut(s)	1032
BanI	GGYRCC	1 cut(s)	884
BanII	GRGCYC	4 cut(s)	225, 849, 975, 991
BauI	CACGAG	1 cut(s)	1591
BbsI	GAAGAC	2 cut(s)	397, 1352
Bbv12I	GWGCWC	4 cut(s)	225, 849, 975, 991
BbvI	GCAGC	7 cut(s)	252, 1131, 1257, 1688, 2121, 2474, 2660
BccI	CCATC	7 cut(s)	1206, 1909, 1918, 1937, 2394, 2920, 2932
BceAI	ACGGC	5 cut(s)	323, 386, 872, 1258, 2770
BciT130I	CCWGG	4 cut(s)	282, 1986, 2662, 2902
BclI	TGATCA	1 cut(s)	732
BcnI	CCSGG	7 cut(s)	595, 665, 724, 1183, 1706, 1891, 2020
BcoDI	GTCTC	7 cut(s)	374, 547, 1133, 1228, 1353, 1516, 1778
BfaI	CTAG	2 cut(s)	1515, 1698
BfmI	CTRYAG	3 cut(s)	267, 1545, 2997
BfoI	RGCGCY	2 cut(s)	888, 1938
BfrI	CTTAAG	1 cut(s)	1283
BfuAI	ACCTGC	2 cut(s)	2660, 2748
BglII	AGATCT	1 cut(s)	2545
BlpI	GCTNAGC	1 cut(s)	974
BmcAI	AGTACT	2 cut(s)	1502, 1860
Bme18I	GGWCC	3 cut(s)	306, 668, 1820
BmeT110I	CYCGRG	2 cut(s)	704, 2621
BmgT120I	GGNCC	4 cut(s)	306, 668, 1820, 2116
BmiI	GGNNCC	5 cut(s)	669, 886, 1034, 2586, 2842
BmrI	ACTGGG	1 cut(s)	767
BmsI	GCATC	6 cut(s)	81, 1281, 2058, 2194, 2623, 2656
BmuI	ACTGGG	1 cut(s)	767
BpiI	GAAGAC	2 cut(s)	397, 1352
BplI	GAGNNNNNCTC	2 cut(s)	1956, 1988
BpmI	CTGGAG	3 cut(s)	833, 2759, 2951
Bpu10I	CCTNAGC	1 cut(s)	969
Bpu1102I	GCTNAGC	1 cut(s)	974
Bpu14I	TTCGAA	2 cut(s)	1301, 1623
BpuEI	CTTGAG	2 cut(s)	1517, 1733
BpuMI	CCSGG	7 cut(s)	595, 665, 724, 1183, 1706, 1891, 2020
BsaBI	GATNNNNATC	1 cut(s)	1947
BsaHI	GRCGYC	5 cut(s)	231, 312, 540, 885, 1221
BsaJI	CCNNGG	9 cut(s)	664, 808, 821, 901, 1181, 1758, 2199, 2661, 2928
BsaWI	WCCGGW	3 cut(s)	449, 737, 1745
BsaXI	ACNNNNNCTCC	6 cut(s)	431, 461, 503, 533, 1295, 1325
Bsc4I	CCNNNNNNNGG	6 cut(s)	166, 758, 1000, 1189, 1529, 2907
Bse118I	RCCGGY	3 cut(s)	374, 536, 699
Bse1I	ACTGG	5 cut(s)	349, 762, 850, 2119, 2877
Bse3DI	GCAATG	4 cut(s)	861, 1615, 2207, 2487
Bse8I	GATNNNNATC	1 cut(s)	1947
BseBI	CCWGG	4 cut(s)	282, 1986, 2662, 2902
BseDI	CCNNGG	9 cut(s)	664, 808, 821, 901, 1181, 1758, 2199, 2661, 2928
BseGI	GGATG	9 cut(s)	72, 98, 1217, 1901, 2209, 2671, 2716, 2912, 2924
BseJI	GATNNNNATC	1 cut(s)	1947
BseLI	CCNNNNNNNGG	6 cut(s)	166, 758, 1000, 1189, 1529, 2907
BseMI	GCAATG	4 cut(s)	861, 1615, 2207, 2487
BseNI	ACTGG	5 cut(s)	349, 762, 850, 2119, 2877
BseRI	GAGGAG	5 cut(s)	146, 149, 1061, 2711, 2876
BseSI	GKGCMC	1 cut(s)	1538
BseXI	GCAGC	7 cut(s)	252, 1131, 1257, 1688, 2121, 2474, 2660
Bsh1236I	CGCG	1 cut(s)	167
Bsh1285I	CGRYCG	2 cut(s)	1750, 2920
BshFI	GGCC	3 cut(s)	525, 2118, 2911
BshNI	GGYRCC	1 cut(s)	884
BsiEI	CGRYCG	2 cut(s)	1750, 2920
BsiHKAI	GWGCWC	4 cut(s)	225, 849, 975, 991
BsiHKCI	CYCGRG	2 cut(s)	704, 2621
BslFI	GGGAC	3 cut(s)	681, 875, 1667
BslI	CCNNNNNNNGG	6 cut(s)	166, 758, 1000, 1189, 1529, 2907
BsmAI	GTCTC	7 cut(s)	374, 547, 1133, 1228, 1353, 1516, 1778
BsmBI	CGTCTC	4 cut(s)	547, 1133, 1228, 1353
BsmFI	GGGAC	3 cut(s)	681, 875, 1667
BsmI	GAATGC	3 cut(s)	575, 744, 816
BsnI	GGCC	3 cut(s)	525, 2118, 2911
BsoBI	CYCGRG	2 cut(s)	704, 2621
Bsp119I	TTCGAA	2 cut(s)	1301, 1623
Bsp1286I	GDGCHC	5 cut(s)	225, 849, 975, 991, 1538
Bsp1720I	GCTNAGC	1 cut(s)	974
Bsp19I	CCATGG	2 cut(s)	2199, 2928
BspANI	GGCC	3 cut(s)	525, 2118, 2911
BspFNI	CGCG	1 cut(s)	167
BspLI	GGNNCC	5 cut(s)	669, 886, 1034, 2586, 2842
BspMAI	CTGCAG	2 cut(s)	1549, 3001
BspMI	ACCTGC	2 cut(s)	2660, 2748
BspPI	GGATC	5 cut(s)	667, 1011, 1027, 1040, 2042
BspQI	GCTCTTC	2 cut(s)	1788, 2171
BspT104I	TTCGAA	2 cut(s)	1301, 1623
BspT107I	GGYRCC	1 cut(s)	884
BspTI	CTTAAG	1 cut(s)	1283
BsrBI	CCGCTC	1 cut(s)	1098
BsrDI	GCAATG	4 cut(s)	861, 1615, 2207, 2487
BsrFI	RCCGGY	3 cut(s)	374, 536, 699
BsrI	ACTGG	5 cut(s)	349, 762, 850, 2119, 2877
BssAI	RCCGGY	3 cut(s)	374, 536, 699
BssECI	CCNNGG	9 cut(s)	664, 808, 821, 901, 1181, 1758, 2199, 2661, 2928
BssNAI	GTATAC	2 cut(s)	1754, 2716
BssNI	GRCGYC	5 cut(s)	231, 312, 540, 885, 1221
BssSI	CACGAG	1 cut(s)	1591
BssT1I	CCWWGG	3 cut(s)	1758, 2199, 2928
Bst1107I	GTATAC	2 cut(s)	1754, 2716
Bst2BI	CACGAG	1 cut(s)	1591
Bst2UI	CCWGG	4 cut(s)	282, 1986, 2662, 2902
Bst4CI	ACNGT	4 cut(s)	775, 1343, 1540, 1681
Bst6I	CTCTTC	4 cut(s)	167, 935, 1788, 2171
BstACI	GRCGYC	5 cut(s)	231, 312, 540, 885, 1221
BstAFI	CTTAAG	1 cut(s)	1283
BstBI	TTCGAA	2 cut(s)	1301, 1623
BstC8I	GCNNGC	3 cut(s)	701, 1767, 2779
BstDSI	CCRYGG	4 cut(s)	808, 821, 2199, 2928
BstEII	GGTNACC	1 cut(s)	452
BstF5I	GGATG	9 cut(s)	72, 98, 1217, 1901, 2209, 2671, 2716, 2912, 2924
BstFNI	CGCG	1 cut(s)	167
BstH2I	RGCGCY	2 cut(s)	888, 1938
BstHHI	GCGC	3 cut(s)	887, 1937, 2777
BstMAI	GTCTC	7 cut(s)	374, 547, 1133, 1228, 1353, 1516, 1778
BstMCI	CGRYCG	2 cut(s)	1750, 2920
BstMWI	GCNNNNNNNGC	8 cut(s)	176, 318, 407, 1285, 1605, 1665, 2115, 2787
BstNI	CCWGG	4 cut(s)	282, 1986, 2662, 2902
BstNSI	RCATGY	1 cut(s)	300
BstPI	GGTNACC	1 cut(s)	452
BstSFI	CTRYAG	3 cut(s)	267, 1545, 2997
BstSLI	GKGCMC	1 cut(s)	1538
BstUI	CGCG	1 cut(s)	167
BstV1I	GCAGC	7 cut(s)	252, 1131, 1257, 1688, 2121, 2474, 2660
BstV2I	GAAGAC	2 cut(s)	397, 1352
BstX2I	RGATCY	3 cut(s)	1003, 1032, 2545
BstXI	CCANNNNNNTGG	1 cut(s)	953
BstYI	RGATCY	3 cut(s)	1003, 1032, 2545
BstZ17I	GTATAC	2 cut(s)	1754, 2716
BsuRI	GGCC	3 cut(s)	525, 2118, 2911
BtgI	CCRYGG	4 cut(s)	808, 821, 2199, 2928
BtsCI	GGATG	9 cut(s)	72, 98, 1217, 1901, 2209, 2671, 2716, 2912, 2924
BtsIMutI	CAGTG	6 cut(s)	342, 780, 1998, 2126, 2235, 2689
BveI	ACCTGC	2 cut(s)	2660, 2748
Cac8I	GCNNGC	3 cut(s)	701, 1767, 2779
CaiI	CAGNNNCTG	1 cut(s)	1544
CfoI	GCGC	3 cut(s)	887, 1937, 2777
Cfr10I	RCCGGY	3 cut(s)	374, 536, 699
Cfr13I	GGNCC	4 cut(s)	306, 668, 1820, 2116
CseI	GACGC	5 cut(s)	239, 301, 529, 581, 1150
Csp6I	GTAC	4 cut(s)	566, 1501, 1859, 2470
CspCI	CAANNNNNGTGG	2 cut(s)	1438, 1473
CviAII	CATG	9 cut(s)	297, 784, 838, 1980, 2200, 2516, 2540, 2734, 2929
CviQI	GTAC	4 cut(s)	566, 1501, 1859, 2470
DinI	GGCGCC	1 cut(s)	886
DrdI	GACNNNNNNGTC	1 cut(s)	1074
DseDI	GACNNNNNNGTC	1 cut(s)	1074
EaeI	YGGCCR	1 cut(s)	523
Eam1104I	CTCTTC	4 cut(s)	167, 935, 1788, 2171
EarI	CTCTTC	4 cut(s)	167, 935, 1788, 2171
EciI	GGCGGA	5 cut(s)	166, 325, 738, 954, 1242
Ecl136II	GAGCTC	4 cut(s)	223, 847, 973, 989
Eco130I	CCWWGG	3 cut(s)	1758, 2199, 2928
Eco24I	GRGCYC	4 cut(s)	225, 849, 975, 991
Eco32I	GATATC	2 cut(s)	187, 1261
Eco47I	GGWCC	3 cut(s)	306, 668, 1820
Eco47III	AGCGCT	1 cut(s)	1936
Eco53kI	GAGCTC	4 cut(s)	223, 847, 973, 989
Eco57I	CTGAAG	3 cut(s)	608, 2167, 2211
Eco88I	CYCGRG	2 cut(s)	704, 2621
Eco91I	GGTNACC	1 cut(s)	452
EcoICRI	GAGCTC	4 cut(s)	223, 847, 973, 989
EcoO65I	GGTNACC	1 cut(s)	452
EcoRI	GAATTC	1 cut(s)	2600
EcoRII	CCWGG	4 cut(s)	280, 1984, 2660, 2900
EcoRV	GATATC	2 cut(s)	187, 1261
EcoT14I	CCWWGG	3 cut(s)	1758, 2199, 2928
EcoT22I	ATGCAT	2 cut(s)	2209, 2941
EcoT38I	GRGCYC	4 cut(s)	225, 849, 975, 991
EgeI	GGCGCC	1 cut(s)	886
EheI	GGCGCC	1 cut(s)	886
ErhI	CCWWGG	3 cut(s)	1758, 2199, 2928
Esp3I	CGTCTC	4 cut(s)	547, 1133, 1228, 1353
FaeI	CATG	9 cut(s)	300, 787, 841, 1983, 2203, 2519, 2543, 2737, 2932
FalI	AAGNNNNNCTT	2 cut(s)	1652, 1684
FaqI	GGGAC	3 cut(s)	681, 875, 1667
FatI	CATG	9 cut(s)	296, 783, 837, 1979, 2199, 2515, 2539, 2733, 2928
FauI	CCCGC	3 cut(s)	469, 613, 2805
FauNDI	CATATG	1 cut(s)	1429
FbaI	TGATCA	1 cut(s)	732
FblI	GTMKAC	2 cut(s)	1753, 2715
FokI	GGATG	9 cut(s)	59, 85, 1224, 1888, 2216, 2678, 2723, 2899, 2911
FriOI	GRGCYC	4 cut(s)	225, 849, 975, 991
FspBI	CTAG	2 cut(s)	1515, 1698
GlaI	GCGC	3 cut(s)	886, 1936, 2776
GsuI	CTGGAG	3 cut(s)	833, 2759, 2951
HaeII	RGCGCY	2 cut(s)	888, 1938
HaeIII	GGCC	3 cut(s)	525, 2118, 2911
HgaI	GACGC	5 cut(s)	239, 301, 529, 581, 1150
HhaI	GCGC	3 cut(s)	887, 1937, 2777
Hin1I	GRCGYC	5 cut(s)	231, 312, 540, 885, 1221
Hin1II	CATG	9 cut(s)	300, 787, 841, 1983, 2203, 2519, 2543, 2737, 2932
Hin6I	GCGC	3 cut(s)	885, 1935, 2775
HinP1I	GCGC	3 cut(s)	885, 1935, 2775
HincII	GTYRAC	1 cut(s)	2763
HindII	GTYRAC	1 cut(s)	2763
HindIII	AAGCTT	4 cut(s)	997, 1493, 2024, 2945
HphI	GGTGA	7 cut(s)	389, 446, 472, 727, 1400, 2504, 2684
Hpy166II	GTNNAC	5 cut(s)	1219, 1754, 2643, 2716, 2763
Hpy188III	TCNNGA	9 cut(s)	857, 911, 920, 1109, 1515, 1523, 1712, 1793, 2968
Hpy8I	GTNNAC	5 cut(s)	1219, 1754, 2643, 2716, 2763
Hpy99I	CGWCG	2 cut(s)	575, 682
HpyAV	CCTTC	9 cut(s)	148, 161, 212, 273, 632, 1187, 1626, 1667, 2519
HpyCH4III	ACNGT	4 cut(s)	775, 1343, 1540, 1681
HpyCH4IV	ACGT	1 cut(s)	1221
HpyF10VI	GCNNNNNNNGC	8 cut(s)	176, 318, 407, 1285, 1605, 1665, 2115, 2787
HpySE526I	ACGT	1 cut(s)	1221
Hsp92I	GRCGYC	5 cut(s)	231, 312, 540, 885, 1221
Hsp92II	CATG	9 cut(s)	300, 787, 841, 1983, 2203, 2519, 2543, 2737, 2932
HspAI	GCGC	3 cut(s)	885, 1935, 2775
KasI	GGCGCC	1 cut(s)	884
KroI	GCCGGC	1 cut(s)	699
KroNI	GCCGGC	1 cut(s)	701
Ksp22I	TGATCA	1 cut(s)	732
LguI	GCTCTTC	2 cut(s)	1788, 2171
LmnI	GCTCC	8 cut(s)	606, 852, 1051, 1185, 1284, 1762, 2288, 2698
Lsp1109I	GCAGC	7 cut(s)	252, 1131, 1257, 1688, 2121, 2474, 2660
LweI	GCATC	6 cut(s)	81, 1281, 2058, 2194, 2623, 2656
MaeI	CTAG	2 cut(s)	1515, 1698
MaeII	ACGT	1 cut(s)	1221
MaeIII	GTNAC	6 cut(s)	340, 452, 775, 1800, 2068, 2320
MbiI	CCGCTC	1 cut(s)	1098
MfeI	CAATTG	2 cut(s)	827, 2877
MflI	RGATCY	3 cut(s)	1003, 1032, 2545
MhlI	GDGCHC	5 cut(s)	225, 849, 975, 991, 1538
Mly113I	GGCGCC	1 cut(s)	885
MlyI	GAGTC	5 cut(s)	10, 376, 1062, 1359, 2966
MmeI	TCCRAC	3 cut(s)	660, 1536, 2868
Mph1103I	ATGCAT	2 cut(s)	2209, 2941
MroNI	GCCGGC	1 cut(s)	699
MroXI	GAANNNNTTC	4 cut(s)	1160, 1307, 2180, 2805
MseI	TTAA	4 cut(s)	146, 212, 1284, 2354
MslI	CAYNNNNRTG	1 cut(s)	2852
MspA1I	CMGCKG	1 cut(s)	464
MspCI	CTTAAG	1 cut(s)	1283
MunI	CAATTG	2 cut(s)	827, 2877
Mva1269I	GAATGC	3 cut(s)	575, 744, 816
MvaI	CCWGG	4 cut(s)	282, 1986, 2662, 2902
MvnI	CGCG	1 cut(s)	167
MwoI	GCNNNNNNNGC	8 cut(s)	176, 318, 407, 1285, 1605, 1665, 2115, 2787
NaeI	GCCGGC	1 cut(s)	701
NarI	GGCGCC	1 cut(s)	885
NciI	CCSGG	7 cut(s)	595, 665, 724, 1183, 1706, 1891, 2020
NcoI	CCATGG	2 cut(s)	2199, 2928
NdeI	CATATG	1 cut(s)	1429
NgoMIV	GCCGGC	1 cut(s)	699
NlaIII	CATG	9 cut(s)	300, 787, 841, 1983, 2203, 2519, 2543, 2737, 2932
NlaIV	GGNNCC	5 cut(s)	669, 886, 1034, 2586, 2842
NmeAIII	GCCGAG	1 cut(s)	882
NmuCI	GTSAC	4 cut(s)	340, 452, 775, 1800
NsiI	ATGCAT	2 cut(s)	2209, 2941
NspI	RCATGY	1 cut(s)	300
NspV	TTCGAA	2 cut(s)	1301, 1623
PaeR7I	CTCGAG	2 cut(s)	704, 2621
PaqCI	CACCTGC	1 cut(s)	2660
PciSI	GCTCTTC	2 cut(s)	1788, 2171
PcsI	WCGNNNNNNNCGW	3 cut(s)	909, 918, 1589
PctI	GAATGC	3 cut(s)	575, 744, 816
PdiI	GCCGGC	1 cut(s)	701
PdmI	GAANNNNTTC	4 cut(s)	1160, 1307, 2180, 2805
PfeI	GAWTC	8 cut(s)	256, 468, 923, 1393, 1465, 1948, 2195, 2743
PflMI	CCANNNNNTGG	1 cut(s)	1000
PfoI	TCCNGGA	1 cut(s)	1889
Ple19I	CGATCG	1 cut(s)	2920
PleI	GAGTC	5 cut(s)	10, 375, 1062, 1359, 2965
PluTI	GGCGCC	1 cut(s)	888
PpsI	GAGTC	5 cut(s)	10, 375, 1062, 1359, 2965
Psp124BI	GAGCTC	4 cut(s)	225, 849, 975, 991
Psp6I	CCWGG	4 cut(s)	280, 1984, 2660, 2900
PspEI	GGTNACC	1 cut(s)	452
PspGI	CCWGG	4 cut(s)	280, 1984, 2660, 2900
PspN4I	GGNNCC	5 cut(s)	669, 886, 1034, 2586, 2842
PspPI	GGNCC	4 cut(s)	306, 668, 1820, 2116
PspXI	VCTCGAGB	2 cut(s)	704, 2621
PstI	CTGCAG	2 cut(s)	1549, 3001
PstNI	CAGNNNCTG	1 cut(s)	1544
PsuI	RGATCY	3 cut(s)	1003, 1032, 2545
PvuI	CGATCG	1 cut(s)	2920
RsaI	GTAC	4 cut(s)	567, 1502, 1860, 2471
RsaNI	GTAC	4 cut(s)	566, 1501, 1859, 2470
RseI	CAYNNNNRTG	1 cut(s)	2852
SacI	GAGCTC	4 cut(s)	225, 849, 975, 991
SapI	GCTCTTC	2 cut(s)	1788, 2171
SaqAI	TTAA	4 cut(s)	146, 212, 1284, 2354
Sau96I	GGNCC	4 cut(s)	306, 668, 1820, 2116
ScaI	AGTACT	2 cut(s)	1502, 1860
SchI	GAGTC	5 cut(s)	10, 376, 1062, 1359, 2966
SduI	GDGCHC	5 cut(s)	225, 849, 975, 991, 1538
SfaNI	GCATC	6 cut(s)	81, 1281, 2058, 2194, 2623, 2656
SfcI	CTRYAG	3 cut(s)	267, 1545, 2997
SfoI	GGCGCC	1 cut(s)	886
Sfr274I	CTCGAG	2 cut(s)	704, 2621
SfuI	TTCGAA	2 cut(s)	1301, 1623
SgrAI	CRCCGGYG	2 cut(s)	374, 536
SinI	GGWCC	3 cut(s)	306, 668, 1820
SlaI	CTCGAG	2 cut(s)	704, 2621
SmiMI	CAYNNNNRTG	1 cut(s)	2852
SmlI	CTYRAG	5 cut(s)	704, 1283, 1496, 1712, 2621
SmoI	CTYRAG	5 cut(s)	704, 1283, 1496, 1712, 2621
SspDI	GGCGCC	1 cut(s)	884
SspMI	CTAG	2 cut(s)	1515, 1698
SstI	GAGCTC	4 cut(s)	225, 849, 975, 991
StyI	CCWWGG	3 cut(s)	1758, 2199, 2928
TaaI	ACNGT	4 cut(s)	775, 1343, 1540, 1681
TaiI	ACGT	1 cut(s)	1224
TaqII	GACCGA	1 cut(s)	685
TatI	WGTACW	4 cut(s)	565, 1500, 1858, 2469
TauI	GCSGC	3 cut(s)	170, 182, 1101
TfiI	GAWTC	8 cut(s)	256, 468, 923, 1393, 1465, 1948, 2195, 2743
Tru1I	TTAA	4 cut(s)	146, 212, 1284, 2354
Tru9I	TTAA	4 cut(s)	146, 212, 1284, 2354
TscAI	CASTG	6 cut(s)	349, 780, 1998, 2126, 2235, 2689
TseFI	GTSAC	4 cut(s)	340, 452, 775, 1800
TseI	GCWGC	7 cut(s)	240, 1144, 1245, 1701, 2109, 2462, 2648
Tsp45I	GTSAC	4 cut(s)	340, 452, 775, 1800
TspDTI	ATGAA	3 cut(s)	704, 2532, 2987
TspGWI	ACGGA	4 cut(s)	810, 825, 1119, 1128
TspRI	CASTG	6 cut(s)	349, 780, 1998, 2126, 2235, 2689
Van91I	CCANNNNNTGG	1 cut(s)	1000
Vha464I	CTTAAG	1 cut(s)	1283
VpaK11BI	GGWCC	3 cut(s)	306, 668, 1820
XapI	RAATTY	7 cut(s)	612, 1403, 2315, 2350, 2600, 2767, 2817
XbaI	TCTAGA	1 cut(s)	1514
XceI	RCATGY	1 cut(s)	300
XcmI	CCANNNNNNNNNTGG	2 cut(s)	788, 2425
XhoI	CTCGAG	2 cut(s)	704, 2621
XmiI	GTMKAC	2 cut(s)	1753, 2715
XmnI	GAANNNNTTC	4 cut(s)	1160, 1307, 2180, 2805
XspI	CTAG	2 cut(s)	1515, 1698
ZraI	GACGTC	1 cut(s)	1222
ZrmI	AGTACT	2 cut(s)	1502, 1860
Zsp2I	ATGCAT	2 cut(s)	2209, 2941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.