Rmu_sc0005127.1_g000003

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005127.1
OG0014543
Physical Location & Seq
Forward (+)
13918 .. 18704
4787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005127.1_g000003.1.cds

Sequence Viewer

Length: 4494 bp
atggagatttcccactccttctacaatcttcttctcttgttcatgttctcagcagctgtttcagcagctgatctttactcagagacccttctgagcttaaagtctgagctcacagatgacgatgatagcttacaagactggtctgtgcctcctggacaaaacccatctgcgaaaatctatgcctgttcttggtctggtgtcaaatgcaacagcaacaactcctctgttaccagtctagacctgtcagtgaagagtcttgccggttcaatctccggagtcaacttcagcgtctttactgatcttcttgacctgaacctgagttacaactcattttccggcaagctcccactgggaatgttcaccctggccaacttaacaagcttggacattagccggaacaacttctccggccagttcccagctggaatctccggtcttaccaatctggttgtgtttgatgcattcagcaacagcttttctgggtcactgcctgctgaggtgtctcaacttcagaatctcaaggtcctgaatctagctgggagttacttcaagggtccaatcccactagaatatggtaattttcaaagccttgagtttattcatcttgcagggaatatgctcagtgggaacataccacctgaattgggcaagctcaaaacagtgactcatatggagattggctacaattcttaccagggaggcatcccttggcaattgggaaacatgagccagcttcagtatcttgatattgctaatgcaaatctctctgagtctattccaagagagcttgggaatctcaccaagcttgagtctctctttctcttcagaaaccagcttagtggatcaataccagtggagttcagtaaacttcaatctctcacaagcttggatctttcggataatgaaatctccgggccgatcccggatagtcttctagagttgaagaacctgaaactgttgagtcttttctacaatgagatgagtggtgctgttcctgaagggattgctgagcttccttcactggagactcttcttatatggaacaactacttctctgggaatcttccacaggatttggggaggaactccaacctcatgtgggttgatgtgtctacaaacaacttcaatggcagcattccagcagatatctgtgtgaaaggtgtgctctttaagctgatgatgttttcgaataattttagtggcagtcttgcaccatctctgtccaattgttcttcacttgttcgtcttcggcttgaagataactcattctcaggtgagatccctttgaaattcagcaactttcgtgatctttcatatgtagacttgtccaagaataaacttactggtgggattccaatagatatagaccaagctcccaagcttgagtactttaatgtgtccaataatccagaattagggggcacaattcctgcacaaacatggtctttgccagttcttcagaatttctcagcttcctcgtgtggtatcgtaggcaatcttccggcatttggaagctgtatatccatatctgttattgaaatgaacatgaacagtttatcagggggtgttccagacagtgtttctagctgccgagctcttgagagatttggtttggccaacaataacttatcaggtcatatacctgaggagcttgcaagtcttcctgctctgcgtgtcctagacctatcacactcagctgtttcagcagctgatctttactcagagacccttctgagcttaaagtctgagctcacagatgacgatgatagcttacaagactggtctgtgcctcctggacaaaacccatctgcgaaaatctatgcctgttcttggtctggtgtcaaatgcaacagcaacaactcctctgttaccagtctagacctgtcagtgaagagtcttgccggttcaatctccggagtcaacttcagcgtctttactgatcttcttgacctgaacctgagttacaactcattttccggcaagctcccactgggaatgttcaccctggccaacttaacaagcttggacattagccggaacaacttctccggccagttcccagctggaatctccggtcttaccaatctggttgtgtttgatgcattcagcaacagcttttctgggtcactgcctgctgaggtgtctcaacttcagaatctcaaggtcctgaatctagctgggagttacttcaagggtccaatcccactagaatatggtaattttcaaagccttgagtttattcatcttgcagggaatatgctcagtgggaacataccacctgaattgggcaagctcaaaacagtgactcatatggagattggctacaattcttaccagggaggcatcccttggcaattgggaaacatgagccagcttcagtatcttgatattgctaatgcaaatctctctgagtctattccaagagagcttgggaatctcaccaagcttgagtccctctttctcttcagaaaccagcttagtggatcaataccagtggagttcagtaaacttcaatctctcacaagcttggatctttcggataatgaaatctccgggccgatcccggatagtcttctagagttgaagaacctgaaactgttgagtcttttctacaatgagatgagtggtgctgttcctgaagggattgctgagcttccttcactggagactcttcttatatggaacaactacttctctgggaatcttccacaggatttggggaggaactccaacctcatgtgggttgatgtgtctacaaacaacttcaatggcagcattccagcagatatctgtgtgaaaggtgtgctctttaagctgatgatgttttcgaataattttagtggcagtcttgctccatctctgtccaattgttcttcacttgttcgtcttcggcttgaagataactcattctcaggtgagatccctttgaaattcagcaactttcgtgatctttcatatgtagacttgtccaagaataaacttactggtgggattccaatagatatagaccaagctcccaagcttgagtactttaatgtgtccaataatccagaattagggggcacaattcctgcacaaacatggtctttgccagttcttcagaatttctcagcttcctcgtgtggtatcgtaggcaatcttccggcatttggaagctgtaaatccttatctgttattgaattgaacatgaacagtttatcagggggtgttccagacagtgtttctagctgccgagctcttgagagatttggtttggccaacaataacttatcaggtcatatacctgaggagcttgcaagtcttcctgctctgcgtgtcctagacctatcacataatagtttggatggaccaataccttcaaagtttggttcttcttcaagcttatcacttctgaatgtgtctttcaatgatatttctgggacaattccctctggaaaggtagtgaagactatgggaagtagcgcattcgttggaaatccaaagctatgtggagaacctttgagatcatgtcccggttcagtggctatcttcggaagcagaggcaccgggaagcttatatgggtcttgctactgtgtgcaggcatagttatgttccttgctctgtcagctctaggagtactttatttttataaaggcagcaaaggccaatggaagacggtctcatttgctggactccctcaattcacagcaagcgatgtattgaagagcttcagttccatagaatccatggatgatgcattgtccccgacgtcagcatcagtatgcaaagcagttctgccaacaggaatcacagtttcagtgaagaagtttgaatgcgatccgaagctagtgaatgttatgttgccattcataacccgaattgggagtgcaaggcataagaatctaatccgattgctcggattttgctacaacaagcatctggtttatctcttgtacgattacttgcccaatggaagtttatcagaaaatataagagtgaaaagggaatgggcagctaagtacaaaattgtggtgagcattgcaaggggattgtgcttccttcaccatgaatgtcatcctgcaattggtcatggagacttgagatcaagtaatataatgtttgacgaaaacatggaaccgcatctgacagaattcggattcaagcatctgctggagttgaacaaaacttcaggtactgcagagacctccaccatggatacaggtgctgcaaacagttctgtagaagaggagctatacagagatgtatacagcttcggggagatcatgctcgaaattttatccaacggcaggttgacgaattcaggagcaagcttacatagcaagtcgagggaaagtgttctcagagaaataatcaatgagaatgaagttggttccaacacttcagtgcaacaggagataaaaagggtgctcgaggtagctacgctctgcactaggagccgaccatctgatcgaccatccatggaggatacattaaagcttttacaggctcgataa

Protein Analysis

1497

Amino Acids

161.97

Weight (kDa)

5.04

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014543)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51350
fragaria_vesca FvH4_1g01520
malus_domestica MD02G1012000.v1.1 MD15G1157800.v1.1
prunus_persica Prupe.7G253000_v2.0.a1
pyrus_communis pycom02g01130 pycom15g14160
rosa_chinensis RchiOBHm_Chr2g0086441
rosa_laevigata RLG00000015759
rosa_multiflora Rmu_sc0005127.1_g000003
rosa_roxburghii Rroxscaffold_2G00154570
rosa_rugosa Rorug01G0467300
rosa_samantha Rh2AG018100 Rh2BG017600 Rh2CG018500 Rh2DG019400
rosa_wichuraiana Rw2G001500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3630
AatII GACGTC 1 cut(s) 3752
Acc36I ACCTGC 1 cut(s) 4278
AccB1I GGYRCC 1 cut(s) 3542
AccI GTMKAC 5 cut(s) 1112, 1320, 2753, 2961, 4245
AccIII TCCGGA 2 cut(s) 272, 1913
AciI CCGC 1 cut(s) 4118
AclWI GGATC 9 cut(s) 850, 897, 913, 1273, 2491, 2538, 2554, 2914, 3812
AcoI YGGCCR 6 cut(s) 366, 409, 1614, 2007, 2050, 3255
AcsI RAATTY 7 cut(s) 1289, 1462, 2930, 3103, 4130, 4272, 4297
AcyI GRCGYC 1 cut(s) 3749
AfaI GTAC 6 cut(s) 1388, 3029, 3618, 3935, 4001, 4174
AjnI CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
AleI CACNNNNGTG 1 cut(s) 4382
AloI GAACNNNNNNTCC 4 cut(s) 389, 421, 2030, 2062
Alw21I GWGCWC 7 cut(s) 111, 1167, 1597, 1752, 2808, 3238, 4410
AlwI GGATC 9 cut(s) 850, 897, 913, 1273, 2491, 2538, 2554, 2914, 3812
AlwNI CAGNNNCTG 5 cut(s) 56, 68, 1709, 4175, 4205
Ama87I CYCGRG 1 cut(s) 4409
Aor13HI TCCGGA 2 cut(s) 272, 1913
AoxI GGCC 9 cut(s) 366, 409, 914, 1614, 2007, 2050, 2555, 3255, 3643
ApoI RAATTY 7 cut(s) 1289, 1462, 2930, 3103, 4130, 4272, 4297
Asp700I GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
AspLEI GCGC 1 cut(s) 3464
AspS9I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
AsuC2I CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
AsuHPI GGTGA 8 cut(s) 352, 790, 1286, 1993, 2431, 2927, 4024, 4034
AsuII TTCGAA 2 cut(s) 1187, 2828
AvaI CYCGRG 1 cut(s) 4409
AvaII GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
AxyI CCTNAGG 2 cut(s) 1644, 3285
BaeGI GKGCMC 2 cut(s) 1424, 3065
BalI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
BanI GGYRCC 1 cut(s) 3542
BanII GRGCYC 4 cut(s) 111, 1597, 1752, 3238
BarI GAAGNNNNNNTAC 4 cut(s) 1482, 1514, 3123, 3155
BauI CACGAG 2 cut(s) 1477, 3118
BbsI GAAGAC 8 cut(s) 923, 1238, 1652, 2564, 2879, 3293, 3452, 3659
Bbv12I GWGCWC 7 cut(s) 111, 1167, 1597, 1752, 2808, 3238, 4410
BbvCI CCTCAGC 2 cut(s) 495, 2136
BccI CCATC 7 cut(s) 172, 1222, 1813, 2863, 3338, 4450, 4462
BceAI ACGGC 1 cut(s) 4300
BciT130I CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
BciVI GTATCC 2 cut(s) 4189, 4459
BcnI CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
BfmI CTRYAG 2 cut(s) 4176, 4218
BfuAI ACCTGC 1 cut(s) 4278
BfuI GTATCC 2 cut(s) 4189, 4459
BlpI GCTNAGC 2 cut(s) 1008, 2649
BmcAI AGTACT 3 cut(s) 1388, 3029, 3618
Bme18I GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
BmeT110I CYCGRG 1 cut(s) 4409
BmgT120I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
BmiI GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
BmrI ACTGGG 2 cut(s) 359, 2000
BmsI GCATC 9 cut(s) 448, 711, 2089, 2352, 3724, 3764, 3925, 4129, 4153
BmuI ACTGGG 2 cut(s) 359, 2000
BpiI GAAGAC 8 cut(s) 923, 1238, 1652, 2564, 2879, 3293, 3452, 3659
BpmI CTGGAG 3 cut(s) 1043, 2684, 4172
Bpu10I CCTNAGC 2 cut(s) 495, 2136
Bpu1102I GCTNAGC 2 cut(s) 1008, 2649
Bpu14I TTCGAA 2 cut(s) 1187, 2828
BpuMI CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
BsaHI GRCGYC 1 cut(s) 3749
BsaI GGTCTC 4 cut(s) 77, 1718, 3664, 4175
BsaJI CCNNGG 9 cut(s) 363, 694, 707, 2004, 2335, 2348, 3726, 4191, 4458
BsaWI WCCGGW 4 cut(s) 272, 431, 1913, 2072
BsaXI ACNNNNNCTCC 4 cut(s) 389, 419, 2030, 2060
Bse118I RCCGGY 2 cut(s) 260, 1901
Bse21I CCTNAGG 2 cut(s) 1644, 3285
Bse3DI GCAATG 1 cut(s) 4017
BseAI TCCGGA 2 cut(s) 272, 1913
BseBI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
BseDI CCNNGG 9 cut(s) 363, 694, 707, 2004, 2335, 2348, 3726, 4191, 4458
BseGI GGATG 6 cut(s) 702, 2343, 3349, 3736, 4054, 4454
BseMI GCAATG 1 cut(s) 4017
BseRI GAGGAG 5 cut(s) 211, 1661, 1852, 3302, 4241
BseSI GKGCMC 2 cut(s) 1424, 3065
BseYI CCCAGC 4 cut(s) 418, 536, 2059, 2177
BsgI GTGCAG 4 cut(s) 1416, 3057, 3597, 4411
BshFI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
BshNI GGYRCC 1 cut(s) 3542
BsiHKAI GWGCWC 7 cut(s) 111, 1167, 1597, 1752, 2808, 3238, 4410
BsiHKCI CYCGRG 1 cut(s) 4409
BslFI GGGAC 4 cut(s) 2437, 3433, 3495, 3727
BsmFI GGGAC 4 cut(s) 2437, 3433, 3495, 3727
BsmI GAATGC 6 cut(s) 461, 1134, 2102, 2775, 3464, 3818
BsnI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
Bso31I GGTCTC 4 cut(s) 77, 1718, 3664, 4175
BsoBI CYCGRG 1 cut(s) 4409
Bsp119I TTCGAA 2 cut(s) 1187, 2828
Bsp1286I GDGCHC 9 cut(s) 111, 1167, 1424, 1597, 1752, 2808, 3065, 3238, 4410
Bsp13I TCCGGA 2 cut(s) 272, 1913
Bsp1720I GCTNAGC 2 cut(s) 1008, 2649
Bsp19I CCATGG 3 cut(s) 3726, 4191, 4458
BspACI CCGC 1 cut(s) 4118
BspANI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
BspEI TCCGGA 2 cut(s) 272, 1913
BspLI GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
BspMAI CTGCAG 1 cut(s) 4180
BspMI ACCTGC 1 cut(s) 4278
BspPI GGATC 9 cut(s) 850, 897, 913, 1273, 2491, 2538, 2554, 2914, 3812
BspQI GCTCTTC 1 cut(s) 3698
BspT104I TTCGAA 2 cut(s) 1187, 2828
BspT107I GGYRCC 1 cut(s) 3542
BspTNI GGTCTC 4 cut(s) 77, 1718, 3664, 4175
BsrDI GCAATG 1 cut(s) 4017
BsrFI RCCGGY 2 cut(s) 260, 1901
BssAI RCCGGY 2 cut(s) 260, 1901
BssECI CCNNGG 9 cut(s) 363, 694, 707, 2004, 2335, 2348, 3726, 4191, 4458
BssNAI GTATAC 1 cut(s) 4246
BssNI GRCGYC 1 cut(s) 3749
BssSI CACGAG 2 cut(s) 1477, 3118
BssT1I CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
Bst1107I GTATAC 1 cut(s) 4246
Bst2BI CACGAG 2 cut(s) 1477, 3118
Bst2UI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
Bst6I CTCTTC 8 cut(s) 245, 827, 1035, 1886, 2468, 2676, 3698, 4218
BstACI GRCGYC 1 cut(s) 3749
BstBI TTCGAA 2 cut(s) 1187, 2828
BstDSI CCRYGG 3 cut(s) 3726, 4191, 4458
BstF5I GGATG 6 cut(s) 702, 2343, 3349, 3736, 4054, 4454
BstHHI GCGC 1 cut(s) 3464
BstMWI GCNNNNNNNGC 8 cut(s) 62, 1171, 1703, 2812, 3605, 3642, 4317, 4434
BstNI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
BstSFI CTRYAG 2 cut(s) 4176, 4218
BstSLI GKGCMC 2 cut(s) 1424, 3065
BstV2I GAAGAC 8 cut(s) 923, 1238, 1652, 2564, 2879, 3293, 3452, 3659
BstX2I RGATCY 4 cut(s) 889, 1278, 2530, 2919
BstXI CCANNNNNNTGG 2 cut(s) 839, 2480
BstYI RGATCY 4 cut(s) 889, 1278, 2530, 2919
BstZ17I GTATAC 1 cut(s) 4246
Bsu36I CCTNAGG 2 cut(s) 1644, 3285
BsuI GTATCC 2 cut(s) 4189, 4459
BsuRI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
BtgI CCRYGG 3 cut(s) 3726, 4191, 4458
BtgZI GCGATG 1 cut(s) 3708
BtsCI GGATG 6 cut(s) 702, 2343, 3349, 3736, 4054, 4454
BtsI GCAGTG 2 cut(s) 485, 2126
BveI ACCTGC 1 cut(s) 4278
CaiI CAGNNNCTG 5 cut(s) 56, 68, 1709, 4175, 4205
CfoI GCGC 1 cut(s) 3464
Cfr10I RCCGGY 2 cut(s) 260, 1901
Cfr13I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
CseI GACGC 2 cut(s) 277, 1918
Csp6I GTAC 6 cut(s) 1387, 3028, 3617, 3934, 4000, 4173
CviQI GTAC 6 cut(s) 1387, 3028, 3617, 3934, 4000, 4173
EaeI YGGCCR 6 cut(s) 366, 409, 1614, 2007, 2050, 3255
Eam1104I CTCTTC 8 cut(s) 245, 827, 1035, 1886, 2468, 2676, 3698, 4218
EarI CTCTTC 8 cut(s) 245, 827, 1035, 1886, 2468, 2676, 3698, 4218
Ecl136II GAGCTC 4 cut(s) 109, 1595, 1750, 3236
Eco130I CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
Eco24I GRGCYC 4 cut(s) 111, 1597, 1752, 3238
Eco31I GGTCTC 4 cut(s) 77, 1718, 3664, 4175
Eco32I GATATC 2 cut(s) 1147, 2788
Eco47I GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
Eco53kI GAGCTC 4 cut(s) 109, 1595, 1750, 3236
Eco81I CCTNAGG 2 cut(s) 1644, 3285
Eco88I CYCGRG 1 cut(s) 4409
EcoICRI GAGCTC 4 cut(s) 109, 1595, 1750, 3236
EcoO109I RGGNCCY 2 cut(s) 523, 2164
EcoRI GAATTC 2 cut(s) 4130, 4297
EcoRII CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
EcoRV GATATC 2 cut(s) 1147, 2788
EcoT14I CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
EcoT22I ATGCAT 3 cut(s) 463, 2104, 3739
EcoT38I GRGCYC 4 cut(s) 111, 1597, 1752, 3238
ErhI CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
FaqI GGGAC 4 cut(s) 2437, 3433, 3495, 3727
FauNDI CATATG 4 cut(s) 669, 1315, 2310, 2956
FblI GTMKAC 5 cut(s) 1112, 1320, 2753, 2961, 4245
FokI GGATG 6 cut(s) 689, 2330, 3356, 3743, 4041, 4441
FriOI GRGCYC 4 cut(s) 111, 1597, 1752, 3238
GlaI GCGC 1 cut(s) 3463
GsaI CCCAGC 4 cut(s) 422, 540, 2063, 2181
GsuI CTGGAG 3 cut(s) 1043, 2684, 4172
HaeIII GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
HgaI GACGC 2 cut(s) 277, 1918
HhaI GCGC 1 cut(s) 3464
Hin1I GRCGYC 1 cut(s) 3749
Hin6I GCGC 1 cut(s) 3462
HinP1I GCGC 1 cut(s) 3462
HincII GTYRAC 3 cut(s) 280, 1921, 4293
HindII GTYRAC 3 cut(s) 280, 1921, 4293
HphI GGTGA 8 cut(s) 352, 790, 1286, 1993, 2431, 2927, 4024, 4034
Hpy99I CGWCG 1 cut(s) 3751
HpyAV CCTTC 9 cut(s) 28, 98, 992, 1026, 1739, 2633, 2667, 3366, 4049
HpyCH4IV ACGT 1 cut(s) 3749
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 1171, 1703, 2812, 3605, 3642, 4317, 4434
HpySE526I ACGT 1 cut(s) 3749
Hsp92I GRCGYC 1 cut(s) 3749
HspAI GCGC 1 cut(s) 3462
Kpn2I TCCGGA 2 cut(s) 272, 1913
LguI GCTCTTC 1 cut(s) 3698
LweI GCATC 9 cut(s) 448, 711, 2089, 2352, 3724, 3764, 3925, 4129, 4153
MaeII ACGT 1 cut(s) 3749
MfeI CAATTG 5 cut(s) 713, 1225, 2354, 2866, 4062
MflI RGATCY 4 cut(s) 889, 1278, 2530, 2919
MhlI GDGCHC 9 cut(s) 111, 1167, 1424, 1597, 1752, 2808, 3065, 3238, 4410
MlsI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MluNI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MmeI TCCRAC 5 cut(s) 1113, 2754, 3451, 4305, 4398
Mox20I TGGCCA 4 cut(s) 368, 1616, 2009, 3257
Mph1103I ATGCAT 3 cut(s) 463, 2104, 3739
MroI TCCGGA 2 cut(s) 272, 1913
MroXI GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
MscI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MseI TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
MslI CAYNNNNRTG 5 cut(s) 1438, 3079, 3587, 3760, 4382
Msp20I TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MspA1I CMGCKG 6 cut(s) 56, 68, 422, 1697, 1709, 2063
MunI CAATTG 5 cut(s) 713, 1225, 2354, 2866, 4062
Mva1269I GAATGC 6 cut(s) 461, 1134, 2102, 2775, 3464, 3818
MvaI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
MwoI GCNNNNNNNGC 8 cut(s) 62, 1171, 1703, 2812, 3605, 3642, 4317, 4434
NciI CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
NcoI CCATGG 3 cut(s) 3726, 4191, 4458
NdeI CATATG 4 cut(s) 669, 1315, 2310, 2956
NlaIV GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
NmeAIII GCCGAG 2 cut(s) 1616, 3257
NmuCI GTSAC 4 cut(s) 483, 661, 2124, 2302
NsiI ATGCAT 3 cut(s) 463, 2104, 3739
NspV TTCGAA 2 cut(s) 1187, 2828
OliI CACNNNNGTG 1 cut(s) 4382
PaeR7I CTCGAG 1 cut(s) 4409
PciSI GCTCTTC 1 cut(s) 3698
PctI GAATGC 6 cut(s) 461, 1134, 2102, 2775, 3464, 3818
PdmI GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
PfoI TCCNGGA 4 cut(s) 151, 921, 1792, 2562
PpuMI RGGWCCY 2 cut(s) 523, 2164
PsiI TTATAA 1 cut(s) 3630
Psp124BI GAGCTC 4 cut(s) 111, 1597, 1752, 3238
Psp5II RGGWCCY 2 cut(s) 523, 2164
Psp6I CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
PspFI CCCAGC 4 cut(s) 418, 536, 2059, 2177
PspGI CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
PspN4I GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
PspPI GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
PspPPI RGGWCCY 2 cut(s) 523, 2164
PspXI VCTCGAGB 1 cut(s) 4409
PsrI GAACNNNNNNTAC 4 cut(s) 305, 337, 1946, 1978
PstI CTGCAG 1 cut(s) 4180
PstNI CAGNNNCTG 5 cut(s) 56, 68, 1709, 4175, 4205
PsuI RGATCY 4 cut(s) 889, 1278, 2530, 2919
PvuII CAGCTG 6 cut(s) 56, 68, 422, 1697, 1709, 2063
RsaI GTAC 6 cut(s) 1388, 3029, 3618, 3935, 4001, 4174
RsaNI GTAC 6 cut(s) 1387, 3028, 3617, 3934, 4000, 4173
RseI CAYNNNNRTG 5 cut(s) 1438, 3079, 3587, 3760, 4382
SacI GAGCTC 4 cut(s) 111, 1597, 1752, 3238
SapI GCTCTTC 1 cut(s) 3698
SaqAI TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
Sau96I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
ScaI AGTACT 3 cut(s) 1388, 3029, 3618
SduI GDGCHC 9 cut(s) 111, 1167, 1424, 1597, 1752, 2808, 3065, 3238, 4410
SfaNI GCATC 9 cut(s) 448, 711, 2089, 2352, 3724, 3764, 3925, 4129, 4153
SfcI CTRYAG 2 cut(s) 4176, 4218
Sfr274I CTCGAG 1 cut(s) 4409
SfuI TTCGAA 2 cut(s) 1187, 2828
SinI GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
SlaI CTCGAG 1 cut(s) 4409
SmiMI CAYNNNNRTG 5 cut(s) 1438, 3079, 3587, 3760, 4382
SsiI CCGC 1 cut(s) 4118
SstI GAGCTC 4 cut(s) 111, 1597, 1752, 3238
StyI CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
TaiI ACGT 1 cut(s) 3752
TaqI TCGA 7 cut(s) 1187, 2828, 4269, 4325, 4410, 4450, 4489
TatI WGTACW 4 cut(s) 1386, 3027, 3616, 3999
Tru1I TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
Tru9I TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
TseFI GTSAC 4 cut(s) 483, 661, 2124, 2302
Tsp45I GTSAC 4 cut(s) 483, 661, 2124, 2302
VpaK11BI GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
XapI RAATTY 7 cut(s) 1289, 1462, 2930, 3103, 4130, 4272, 4297
XbaI TCTAGA 4 cut(s) 235, 934, 1876, 2575
XcmI CCANNNNNNNNNTGG 3 cut(s) 419, 2060, 3724
XhoI CTCGAG 1 cut(s) 4409
XmiI GTMKAC 5 cut(s) 1112, 1320, 2753, 2961, 4245
XmnI GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
ZraI GACGTC 1 cut(s) 3750
ZrmI AGTACT 3 cut(s) 1388, 3029, 3618
Zsp2I ATGCAT 3 cut(s) 463, 2104, 3739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.