Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0014543

Physical Location & Seq

Genomic Coordinates Reverse (-)

1259858 .. 1264142

Gene Structure 4285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G001500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGAGATTTCCCACTCCTTCTTCTACAATCTTCTTCTCTTGTTCATGTTCTCAGCAGCTGTTTCAGCAGCTGATCTTTACTCAGAGACCCTTCTGAGCTTAAAGTCTGAGCTCACAGATGACTATGATATCTTACAAGACTGGTCTGTGCCTCCTGGACAAAACCCATCTGCGAAAATCTATGCCTGTTCTTGGTCTGGTGTCAAATGCAACAGCAACAACTCCTCTGTTACCAGTCTAGACCTGTCAGTGAAGAGTCTTGCCGGTTCAATCTCCGGAGTCAACTTCAGTGTCTTTACTGATCTTCTTGACCTGAACCTGAGTTACAACTCATTTTCCGGCAAGCTCCCACTGGGAATGTTCACCCTGGCCAACTTAACAAGCTTGGACATTAGCCGGAACAACTTCTCCGGCCAGTTCCCAGCTGGAATCTCCGGTCTTACCAATCTGGTTGTGTTTGATGCATTCAGCAACAGCTTTTCTGGGTCACTGCCTGCTGAGGTGTCTCAACTTCAGAATCTCAAGGTCCTGAATCTAGCTGGGAGCTACTTCAAGGGTCCAATCCCACTAGAATATGGTAATTTTCAAAGCCTTGAGTTTATTCATCTTGCAGGGAATATGCTCAGTGGGAACATACCACCTGAATTGGGCAAGCTCAAAACAGTGACTCATATGGAGATTGGCTACAATTCTTACCAGGGAGGCATCCCTTGGCAATTGGGAAACATGAGCCAGCTTCAGTATCTTGATATTGCTAATGCAAATCTCTCTGAGTCTATTCCAAGAGAGCTTGGGAATCTCACCAAGCTTGAGTCTCTCTTTCTCTTCAGAAACCAGCTTAGTGGATCAATACCAGTGGAGTTCAGTAAACTTCAATCTCTCACAAGCTTGGATCTTTCGGATAATGAAATCTCCGGGCCGATCCCGGATAGTCTTCTAGAGTTGAAGAACCTGAAACTGTTGAGTCTTTTCTACAATGAGATGAGTGGTGCTGTTCCTGAAGGGATTGCTGAGCTTCCTTCACTGGAGACTCTTCTTATATGGAACAACTACTTCTCTGGGAATCTTCCACAGGATTTGGGGAGGAACTCCAACCTCATGTGGGTTGATGTGTCTACAAACAACTTCAATGGCAGCATTCCAGCAGATATCTGTGTGAAAGGTGTGCTCTTTAAGCTGATGATGTTTTCGAATAATTTTAGTGGCAGTCTTGCACCATCTCTGTCCAATTGTTCTTCACTTGTTCGTCTTCGGCTTGAAGATAACTCATTCTCAGGTGAGATCCCTTTGAAATTCAGCAACTTTCGTGATCTTTCATATGTAGACTTGTCCAAGAATAAACTTACTGGTGGGATTCCAATAGATATAGACCAAGCTCCCAAGCTTGAGTACTTTAATGTGTCCAATAATCCAGAATTAGGGGGCACAATTCCTGCACAAACATGGTCTTTGCCAGTTCTTCAGAATTTCTCAGCTTCCTCGTGTGGTATCGTAGGCAATCTTCCGGCATTTGGAAGCTGTAAATCCTTATCTGTTATTGAATTGAACATGAACAGTTTATCAGGGGGTGTTCCAGACAGTGTTTCTAGCTGCCGAGCTCTTGAGAGATTTGGTTTGGCCAACAATAACTTATCAGGTCATATACCTGAGGAGCTTGCAAGTCTTCCTGCTCTGCGTGTCCTAGACCTATCACATAATAGTTTGGATGGACCAATACCTTCAAAGTTTGGTTCTTCTTCAAGCTTATCACTTCTGAATGTGTCTTTCAATGATATTTCTGGGACAATTCCCTCTGGAAAGGTAGTGAAGACTATGGGAAGTAGCGCATTCGTTGGAAATCCAAAGCTATGTGGAGAACCTTTGAGATCATGTCCCGGTTCAGTGGCTATCTTCGGAAGTAGAGGCACCGGGAAGCTTATATGGGTCTTGCTACTGTGTGCAGGCATAGTTATGTTCCTTGCTCTGTCAGCTCTAGGAGTACTTTATTTTTATAAAGGCAGCAAAGGCCAATGGAAGACGGTCTCATTTGCTGGACTCCCTCAATTCACAGCAAGCGATGTATTGAAGAGCTTCAGTTCCATAGAATCCATGGATGATGCATTGTCCCCGACGTCAGCATCAGTATGCAAAGCGGTTCTGCCAACAGGAATCACAGTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010016 GO:0010065 GO:0010067 GO:0010087 GO:0010089 GO:0010154 GO:0010223 GO:0010346 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0044464 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071944 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

720

Amino Acids

77.15

Weight (kDa)

4.93

Isoelectric Point (pI)

31.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	167 - 275	3.6e-09	Leucine-rich repeat region
LRR_14	PF23598	282 - 374	1.3e-07	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51350
fragaria_vesca	FvH4_1g01520
malus_domestica	MD02G1012000.v1.1 MD15G1157800.v1.1
prunus_persica	Prupe.7G253000_v2.0.a1
pyrus_communis	pycom02g01130 pycom15g14160
rosa_chinensis	RchiOBHm_Chr2g0086441
rosa_laevigata	RLG00000015759
rosa_multiflora	Rmu_sc0005127.1_g000003
rosa_roxburghii	Rroxscaffold_2G00154570
rosa_rugosa	Rorug01G0467300
rosa_samantha	Rh2AG018100 Rh2BG017600 Rh2CG018500 Rh2DG019400
rosa_wichuraiana	Rw2G001500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1992
AatII	GACGTC	1 cut(s)	2114
AccB1I	GGYRCC	1 cut(s)	1904
AccI	GTMKAC	2 cut(s)	1115, 1323
AccIII	TCCGGA	1 cut(s)	275
AciI	CCGC	1 cut(s)	2132
AclWI	GGATC	4 cut(s)	853, 900, 916, 1276
AcoI	YGGCCR	3 cut(s)	369, 412, 1617
AcsI	RAATTY	2 cut(s)	1292, 1465
AcuI	CTGAAG	7 cut(s)	271, 497, 722, 811, 1020, 1445, 2056
AcyI	GRCGYC	1 cut(s)	2111
AfaI	GTAC	2 cut(s)	1391, 1980
AfiI	CCNNNNNNNGG	5 cut(s)	192, 647, 1102, 1418, 1511
AjnI	CCWGG	3 cut(s)	154, 366, 696
AloI	GAACNNNNNNTCC	3 cut(s)	392, 424, 2139
Alw21I	GWGCWC	3 cut(s)	114, 1170, 1600
Alw26I	GTCTC	5 cut(s)	80, 510, 819, 1022, 2026
AlwI	GGATC	4 cut(s)	853, 900, 916, 1276
AlwNI	CAGNNNCTG	2 cut(s)	59, 71
Aor13HI	TCCGGA	1 cut(s)	275
AoxI	GGCC	5 cut(s)	369, 412, 917, 1617, 2005
ApeKI	GCWGC	5 cut(s)	56, 68, 1134, 1590, 1998
ApoI	RAATTY	2 cut(s)	1292, 1465
Asp700I	GAANNNNTTC	2 cut(s)	404, 2069
AspLEI	GCGC	1 cut(s)	1826
AspS9I	GGNCC	4 cut(s)	526, 557, 917, 1709
AsuC2I	CCSGG	4 cut(s)	916, 926, 1875, 1909
AsuHPI	GGTGA	3 cut(s)	355, 793, 1289
AsuII	TTCGAA	1 cut(s)	1190
AvaII	GGWCC	3 cut(s)	526, 557, 1709
AxyI	CCTNAGG	1 cut(s)	1647
BaeGI	GKGCMC	1 cut(s)	1427
BalI	TGGCCA	2 cut(s)	371, 1619
BanI	GGYRCC	1 cut(s)	1904
BanII	GRGCYC	2 cut(s)	114, 1600
BarI	GAAGNNNNNNTAC	2 cut(s)	1485, 1517
BauI	CACGAG	1 cut(s)	1480
BbsI	GAAGAC	5 cut(s)	926, 1241, 1655, 1814, 2021
Bbv12I	GWGCWC	3 cut(s)	114, 1170, 1600
BbvCI	CCTCAGC	1 cut(s)	498
BbvI	GCAGC	5 cut(s)	68, 80, 1146, 1577, 2010
BccI	CCATC	3 cut(s)	175, 1225, 1700
BciT130I	CCWGG	3 cut(s)	156, 368, 698
BcnI	CCSGG	4 cut(s)	916, 926, 1875, 1909
BcoDI	GTCTC	5 cut(s)	80, 510, 819, 1022, 2026
BfaI	CTAG	7 cut(s)	239, 536, 569, 938, 1587, 1682, 1973
BisI	GCNGC	5 cut(s)	57, 69, 1135, 1591, 1999
BlpI	GCTNAGC	1 cut(s)	1011
BlsI	GCNGC	5 cut(s)	58, 70, 1136, 1592, 2000
BmcAI	AGTACT	2 cut(s)	1391, 1980
Bme1390I	CCNGG	7 cut(s)	156, 368, 698, 916, 926, 1875, 1909
Bme18I	GGWCC	3 cut(s)	526, 557, 1709
BmgT120I	GGNCC	4 cut(s)	526, 557, 917, 1709
BmiI	GGNNCC	2 cut(s)	558, 1906
BmrFI	CCNGG	7 cut(s)	156, 368, 698, 916, 926, 1875, 1909
BmrI	ACTGGG	1 cut(s)	362
BmsI	GCATC	4 cut(s)	451, 714, 2086, 2126
BmuI	ACTGGG	1 cut(s)	362
BpiI	GAAGAC	5 cut(s)	926, 1241, 1655, 1814, 2021
BpmI	CTGGAG	1 cut(s)	1046
Bpu10I	CCTNAGC	1 cut(s)	498
Bpu1102I	GCTNAGC	1 cut(s)	1011
Bpu14I	TTCGAA	1 cut(s)	1190
BpuEI	CTTGAG	5 cut(s)	506, 614, 830, 1406, 1622
BpuMI	CCSGG	4 cut(s)	916, 926, 1875, 1909
BsaHI	GRCGYC	1 cut(s)	2111
BsaI	GGTCTC	2 cut(s)	80, 2026
BsaJI	CCNNGG	4 cut(s)	366, 697, 710, 2088
BsaWI	WCCGGW	2 cut(s)	275, 434
BsaXI	ACNNNNNCTCC	2 cut(s)	392, 422
Bsc4I	CCNNNNNNNGG	5 cut(s)	192, 647, 1102, 1418, 1511
Bse118I	RCCGGY	1 cut(s)	263
Bse1I	ACTGG	8 cut(s)	146, 234, 357, 415, 854, 1029, 1351, 1454
Bse21I	CCTNAGG	1 cut(s)	1647
BseAI	TCCGGA	1 cut(s)	275
BseBI	CCWGG	3 cut(s)	156, 368, 698
BseDI	CCNNGG	4 cut(s)	366, 697, 710, 2088
BseGI	GGATG	3 cut(s)	705, 1711, 2098
BseLI	CCNNNNNNNGG	5 cut(s)	192, 647, 1102, 1418, 1511
BseNI	ACTGG	8 cut(s)	146, 234, 357, 415, 854, 1029, 1351, 1454
BseRI	GAGGAG	2 cut(s)	214, 1664
BseSI	GKGCMC	1 cut(s)	1427
BseXI	GCAGC	5 cut(s)	68, 80, 1146, 1577, 2010
BseYI	CCCAGC	2 cut(s)	421, 539
BsgI	GTGCAG	2 cut(s)	1419, 1959
BshFI	GGCC	5 cut(s)	371, 414, 919, 1619, 2007
BshNI	GGYRCC	1 cut(s)	1904
BsiHKAI	GWGCWC	3 cut(s)	114, 1170, 1600
BslFI	GGGAC	3 cut(s)	1795, 1857, 2089
BslI	CCNNNNNNNGG	5 cut(s)	192, 647, 1102, 1418, 1511
BsmAI	GTCTC	5 cut(s)	80, 510, 819, 1022, 2026
BsmFI	GGGAC	3 cut(s)	1795, 1857, 2089
BsmI	GAATGC	3 cut(s)	464, 1137, 1826
BsnI	GGCC	5 cut(s)	371, 414, 919, 1619, 2007
Bso31I	GGTCTC	2 cut(s)	80, 2026
Bsp119I	TTCGAA	1 cut(s)	1190
Bsp1286I	GDGCHC	4 cut(s)	114, 1170, 1427, 1600
Bsp13I	TCCGGA	1 cut(s)	275
Bsp143I	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
Bsp1720I	GCTNAGC	1 cut(s)	1011
Bsp19I	CCATGG	1 cut(s)	2088
BspACI	CCGC	1 cut(s)	2132
BspANI	GGCC	5 cut(s)	371, 414, 919, 1619, 2007
BspEI	TCCGGA	1 cut(s)	275
BspLI	GGNNCC	2 cut(s)	558, 1906
BspPI	GGATC	4 cut(s)	853, 900, 916, 1276
BspQI	GCTCTTC	1 cut(s)	2060
BspT104I	TTCGAA	1 cut(s)	1190
BspT107I	GGYRCC	1 cut(s)	1904
BspTNI	GGTCTC	2 cut(s)	80, 2026
BsrFI	RCCGGY	1 cut(s)	263
BsrI	ACTGG	8 cut(s)	146, 234, 357, 415, 854, 1029, 1351, 1454
BssAI	RCCGGY	1 cut(s)	263
BssECI	CCNNGG	4 cut(s)	366, 697, 710, 2088
BssMI	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
BssNI	GRCGYC	1 cut(s)	2111
BssSI	CACGAG	1 cut(s)	1480
BssT1I	CCWWGG	2 cut(s)	710, 2088
Bst2BI	CACGAG	1 cut(s)	1480
Bst2UI	CCWGG	3 cut(s)	156, 368, 698
Bst4CI	ACNGT	7 cut(s)	664, 960, 1556, 1580, 1935, 2020, 2155
Bst6I	CTCTTC	4 cut(s)	248, 830, 1038, 2060
BstACI	GRCGYC	1 cut(s)	2111
BstBI	TTCGAA	1 cut(s)	1190
BstC8I	GCNNGC	7 cut(s)	344, 495, 653, 734, 1656, 1942, 2053
BstDSI	CCRYGG	1 cut(s)	2088
BstF5I	GGATG	3 cut(s)	705, 1711, 2098
BstHHI	GCGC	1 cut(s)	1826
BstKTI	GATC	8 cut(s)	76, 304, 848, 895, 924, 1284, 1312, 1868
BstMAI	GTCTC	5 cut(s)	80, 510, 819, 1022, 2026
BstMBI	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
BstMWI	GCNNNNNNNGC	4 cut(s)	65, 1174, 1967, 2004
BstNI	CCWGG	3 cut(s)	156, 368, 698
BstSCI	CCNGG	7 cut(s)	154, 366, 696, 914, 924, 1873, 1907
BstSLI	GKGCMC	1 cut(s)	1427
BstV1I	GCAGC	5 cut(s)	68, 80, 1146, 1577, 2010
BstV2I	GAAGAC	5 cut(s)	926, 1241, 1655, 1814, 2021
BstX2I	RGATCY	2 cut(s)	892, 1281
BstXI	CCANNNNNNTGG	1 cut(s)	842
BstYI	RGATCY	2 cut(s)	892, 1281
Bsu36I	CCTNAGG	1 cut(s)	1647
BsuRI	GGCC	5 cut(s)	371, 414, 919, 1619, 2007
BtgI	CCRYGG	1 cut(s)	2088
BtgZI	GCGATG	1 cut(s)	2070
BtsCI	GGATG	3 cut(s)	705, 1711, 2098
BtsI	GCAGTG	1 cut(s)	488
Cac8I	GCNNGC	7 cut(s)	344, 495, 653, 734, 1656, 1942, 2053
CaiI	CAGNNNCTG	2 cut(s)	59, 71
CfoI	GCGC	1 cut(s)	1826
Cfr10I	RCCGGY	1 cut(s)	263
Cfr13I	GGNCC	4 cut(s)	526, 557, 917, 1709
Csp6I	GTAC	2 cut(s)	1390, 1979
CspCI	CAANNNNNGTGG	6 cut(s)	627, 662, 837, 872, 1059, 1094
CviAII	CATG	7 cut(s)	46, 727, 1099, 1443, 1549, 1869, 2089
CviQI	GTAC	2 cut(s)	1390, 1979
DpnI	GATC	8 cut(s)	75, 303, 847, 894, 923, 1283, 1311, 1867
DpnII	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
EaeI	YGGCCR	3 cut(s)	369, 412, 1617
Eam1104I	CTCTTC	4 cut(s)	248, 830, 1038, 2060
EarI	CTCTTC	4 cut(s)	248, 830, 1038, 2060
Ecl136II	GAGCTC	2 cut(s)	112, 1598
Eco130I	CCWWGG	2 cut(s)	710, 2088
Eco24I	GRGCYC	2 cut(s)	114, 1600
Eco31I	GGTCTC	2 cut(s)	80, 2026
Eco32I	GATATC	2 cut(s)	130, 1150
Eco47I	GGWCC	3 cut(s)	526, 557, 1709
Eco53kI	GAGCTC	2 cut(s)	112, 1598
Eco57I	CTGAAG	7 cut(s)	271, 497, 722, 811, 1020, 1445, 2056
Eco81I	CCTNAGG	1 cut(s)	1647
EcoICRI	GAGCTC	2 cut(s)	112, 1598
EcoO109I	RGGNCCY	1 cut(s)	526
EcoRII	CCWGG	3 cut(s)	154, 366, 696
EcoRV	GATATC	2 cut(s)	130, 1150
EcoT14I	CCWWGG	2 cut(s)	710, 2088
EcoT22I	ATGCAT	2 cut(s)	466, 2101
EcoT38I	GRGCYC	2 cut(s)	114, 1600
ErhI	CCWWGG	2 cut(s)	710, 2088
FaeI	CATG	7 cut(s)	49, 730, 1102, 1446, 1552, 1872, 2092
FaqI	GGGAC	3 cut(s)	1795, 1857, 2089
FatI	CATG	7 cut(s)	45, 726, 1098, 1442, 1548, 1868, 2088
FauNDI	CATATG	2 cut(s)	672, 1318
FblI	GTMKAC	2 cut(s)	1115, 1323
Fnu4HI	GCNGC	5 cut(s)	57, 69, 1135, 1591, 1999
FokI	GGATG	3 cut(s)	692, 1718, 2105
FriOI	GRGCYC	2 cut(s)	114, 1600
Fsp4HI	GCNGC	5 cut(s)	57, 69, 1135, 1591, 1999
FspBI	CTAG	7 cut(s)	239, 536, 569, 938, 1587, 1682, 1973
GlaI	GCGC	1 cut(s)	1825
GluI	GCNGC	5 cut(s)	57, 69, 1135, 1591, 1999
GsaI	CCCAGC	2 cut(s)	425, 543
GsuI	CTGGAG	1 cut(s)	1046
HaeIII	GGCC	5 cut(s)	371, 414, 919, 1619, 2007
HhaI	GCGC	1 cut(s)	1826
Hin1I	GRCGYC	1 cut(s)	2111
Hin1II	CATG	7 cut(s)	49, 730, 1102, 1446, 1552, 1872, 2092
Hin6I	GCGC	1 cut(s)	1824
HinP1I	GCGC	1 cut(s)	1824
HincII	GTYRAC	1 cut(s)	283
HindII	GTYRAC	1 cut(s)	283
HindIII	AAGCTT	6 cut(s)	382, 806, 886, 1382, 1741, 1913
HphI	GGTGA	3 cut(s)	355, 793, 1289
Hpy166II	GTNNAC	5 cut(s)	283, 363, 869, 1116, 1324
Hpy8I	GTNNAC	5 cut(s)	283, 363, 869, 1116, 1324
Hpy99I	CGWCG	1 cut(s)	2113
HpyAV	CCTTC	5 cut(s)	28, 101, 995, 1029, 1728
HpyCH4III	ACNGT	7 cut(s)	664, 960, 1556, 1580, 1935, 2020, 2155
HpyCH4IV	ACGT	1 cut(s)	2111
HpyF10VI	GCNNNNNNNGC	4 cut(s)	65, 1174, 1967, 2004
HpySE526I	ACGT	1 cut(s)	2111
Hsp92I	GRCGYC	1 cut(s)	2111
Hsp92II	CATG	7 cut(s)	49, 730, 1102, 1446, 1552, 1872, 2092
HspAI	GCGC	1 cut(s)	1824
Kpn2I	TCCGGA	1 cut(s)	275
Kzo9I	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
LguI	GCTCTTC	1 cut(s)	2060
LmnI	GCTCC	4 cut(s)	351, 543, 1381, 1651
Lsp1109I	GCAGC	5 cut(s)	68, 80, 1146, 1577, 2010
LweI	GCATC	4 cut(s)	451, 714, 2086, 2126
MaeI	CTAG	7 cut(s)	239, 536, 569, 938, 1587, 1682, 1973
MaeII	ACGT	1 cut(s)	2111
MaeIII	GTNAC	4 cut(s)	229, 323, 486, 664
MalI	GATC	8 cut(s)	75, 303, 847, 894, 923, 1283, 1311, 1867
MboI	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
MfeI	CAATTG	2 cut(s)	716, 1228
MflI	RGATCY	2 cut(s)	892, 1281
MhlI	GDGCHC	4 cut(s)	114, 1170, 1427, 1600
MlsI	TGGCCA	2 cut(s)	371, 1619
MluNI	TGGCCA	2 cut(s)	371, 1619
MlyI	GAGTC	8 cut(s)	265, 288, 661, 782, 821, 973, 1024, 2028
MmeI	TCCRAC	2 cut(s)	1116, 1813
Mox20I	TGGCCA	2 cut(s)	371, 1619
Mph1103I	ATGCAT	2 cut(s)	466, 2101
MroI	TCCGGA	1 cut(s)	275
MroXI	GAANNNNTTC	2 cut(s)	404, 2069
MscI	TGGCCA	2 cut(s)	371, 1619
MseI	TTAA	4 cut(s)	101, 377, 1173, 1395
MslI	CAYNNNNRTG	3 cut(s)	1441, 1949, 2122
Msp20I	TGGCCA	2 cut(s)	371, 1619
MspA1I	CMGCKG	3 cut(s)	59, 71, 425
MspR9I	CCNGG	7 cut(s)	156, 368, 698, 916, 926, 1875, 1909
MunI	CAATTG	2 cut(s)	716, 1228
Mva1269I	GAATGC	3 cut(s)	464, 1137, 1826
MvaI	CCWGG	3 cut(s)	156, 368, 698
MwoI	GCNNNNNNNGC	4 cut(s)	65, 1174, 1967, 2004
NciI	CCSGG	4 cut(s)	916, 926, 1875, 1909
NcoI	CCATGG	1 cut(s)	2088
NdeI	CATATG	2 cut(s)	672, 1318
NdeII	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
NlaIII	CATG	7 cut(s)	49, 730, 1102, 1446, 1552, 1872, 2092
NlaIV	GGNNCC	2 cut(s)	558, 1906
NmeAIII	GCCGAG	1 cut(s)	1619
NmuCI	GTSAC	2 cut(s)	486, 664
NsiI	ATGCAT	2 cut(s)	466, 2101
NspV	TTCGAA	1 cut(s)	1190
PciSI	GCTCTTC	1 cut(s)	2060
PctI	GAATGC	3 cut(s)	464, 1137, 1826
PdmI	GAANNNNTTC	2 cut(s)	404, 2069
PfeI	GAWTC	8 cut(s)	429, 517, 532, 796, 1063, 1354, 2084, 2148
PfoI	TCCNGGA	2 cut(s)	154, 924
PkrI	GCNGC	5 cut(s)	58, 70, 1136, 1592, 2000
PleI	GAGTC	8 cut(s)	264, 287, 661, 781, 820, 972, 1024, 2028
PpsI	GAGTC	8 cut(s)	264, 287, 661, 781, 820, 972, 1024, 2028
PpuMI	RGGWCCY	1 cut(s)	526
PsiI	TTATAA	1 cut(s)	1992
Psp124BI	GAGCTC	2 cut(s)	114, 1600
Psp5II	RGGWCCY	1 cut(s)	526
Psp6I	CCWGG	3 cut(s)	154, 366, 696
PspFI	CCCAGC	2 cut(s)	421, 539
PspGI	CCWGG	3 cut(s)	154, 366, 696
PspN4I	GGNNCC	2 cut(s)	558, 1906
PspPI	GGNCC	4 cut(s)	526, 557, 917, 1709
PspPPI	RGGWCCY	1 cut(s)	526
PsrI	GAACNNNNNNTAC	2 cut(s)	308, 340
PstNI	CAGNNNCTG	2 cut(s)	59, 71
PsuI	RGATCY	2 cut(s)	892, 1281
PvuII	CAGCTG	3 cut(s)	59, 71, 425
RsaI	GTAC	2 cut(s)	1391, 1980
RsaNI	GTAC	2 cut(s)	1390, 1979
RseI	CAYNNNNRTG	3 cut(s)	1441, 1949, 2122
SacI	GAGCTC	2 cut(s)	114, 1600
SapI	GCTCTTC	1 cut(s)	2060
SaqAI	TTAA	4 cut(s)	101, 377, 1173, 1395
SatI	GCNGC	5 cut(s)	57, 69, 1135, 1591, 1999
Sau3AI	GATC	8 cut(s)	73, 301, 845, 892, 921, 1281, 1309, 1865
Sau96I	GGNCC	4 cut(s)	526, 557, 917, 1709
ScaI	AGTACT	2 cut(s)	1391, 1980
SchI	GAGTC	8 cut(s)	265, 288, 661, 782, 821, 973, 1024, 2028
ScrFI	CCNGG	7 cut(s)	156, 368, 698, 916, 926, 1875, 1909
SduI	GDGCHC	4 cut(s)	114, 1170, 1427, 1600
SfaNI	GCATC	4 cut(s)	451, 714, 2086, 2126
SfuI	TTCGAA	1 cut(s)	1190
SinI	GGWCC	3 cut(s)	526, 557, 1709
SmiMI	CAYNNNNRTG	3 cut(s)	1441, 1949, 2122
SmlI	CTYRAG	5 cut(s)	521, 593, 809, 1385, 1601
SmoI	CTYRAG	5 cut(s)	521, 593, 809, 1385, 1601
SsiI	CCGC	1 cut(s)	2132
SspMI	CTAG	7 cut(s)	239, 536, 569, 938, 1587, 1682, 1973
SstI	GAGCTC	2 cut(s)	114, 1600
StyD4I	CCNGG	7 cut(s)	154, 366, 696, 914, 924, 1873, 1907
StyI	CCWWGG	2 cut(s)	710, 2088
TaaI	ACNGT	7 cut(s)	664, 960, 1556, 1580, 1935, 2020, 2155
TaiI	ACGT	1 cut(s)	2114
TaqI	TCGA	1 cut(s)	1190
TatI	WGTACW	2 cut(s)	1389, 1978
TfiI	GAWTC	8 cut(s)	429, 517, 532, 796, 1063, 1354, 2084, 2148
Tru1I	TTAA	4 cut(s)	101, 377, 1173, 1395
Tru9I	TTAA	4 cut(s)	101, 377, 1173, 1395
TseFI	GTSAC	2 cut(s)	486, 664
TseI	GCWGC	5 cut(s)	56, 68, 1134, 1590, 1998
Tsp45I	GTSAC	2 cut(s)	486, 664
TspDTI	ATGAA	5 cut(s)	34, 593, 921, 1305, 1565
VpaK11BI	GGWCC	3 cut(s)	526, 557, 1709
XapI	RAATTY	2 cut(s)	1292, 1465
XbaI	TCTAGA	2 cut(s)	238, 937
XcmI	CCANNNNNNNNNTGG	2 cut(s)	422, 2086
XmiI	GTMKAC	2 cut(s)	1115, 1323
XmnI	GAANNNNTTC	2 cut(s)	404, 2069
XspI	CTAG	7 cut(s)	239, 536, 569, 938, 1587, 1682, 1973
ZraI	GACGTC	1 cut(s)	2112
ZrmI	AGTACT	2 cut(s)	1391, 1980
Zsp2I	ATGCAT	2 cut(s)	466, 2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.