Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0014543

Physical Location & Seq

Genomic Coordinates Reverse (-)

1291306 .. 1295945

Gene Structure 4640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG017600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2841 bp

ATGGAGATTTCCCACTCCTTCTTCTTCTACAGTCTTCTTCTCTTGTTCATGTTCTCTGCAGCTGTTTCAGCAGCTGATCTTTACTCAGAGACCCTTCTGAGCTTAAAATCTGAGCTCACAGATGACTATGATAGCTTACAAGACTGGTCTGTGCCTCCTGGACAAAACCCATCTGCCAAAATCTATGCCTGTTCTTGGTCTGGTGTCAAATGCAACAGCAACAACTCCTCTGTTACCAGTCTAGACCTGTCAGTGAAGAGTCTTGCCGGTTCAATCTCCGGAGTCAACTTCAGTGTCTTTACTGATCTTCTTGACCTGAACCTGAGTTACAACTCATTTTCCGGCAAGCTCCCACTGGGAATGTTCACCCTGGCCAACTTAACAAGCTTGGACATTAGCCGGAACAACTTCTCCGGCCAGTTCCCAGCTGGAATCTCCGGTCTTAACAATCTGGTTGTGTTTGATGCATTCAGCAACAGCTTTTCTGGGTCACTGCCTGCTGAGGTGTCTCAACTTCAGAATCTCAAGGTCCTGAATCTAGCTGGGAGCTACTTCAAGGGTCCAATCCCACTAGAATATGGTAATTTTCAAAGCCTTGAGTTGATTCATCTTGCAGGGAATATGCTCAGTGGGAACATACCACCTGAATTGGGCAAGCTCAAAACAGTGACTCATATGGAGATTGGCTACAATTCTTACCAGGGAGGCATCCCTTGGCAATTGGGAAACATGAGTCAGCTTCAGTATCTTGATATTGCTTATGCAAATCTCTCTGAGTCTATTCCAAGAGAGCTTGGGAATCTCACCAAGCTTGAGTCTCTCTTTCTCTTCAGAAACCAGCTTAGTGGATCCATACCAGTGGAGTTCAGTAAACTTCAATCTCTCGCAAGCTTGGATCTTTCGGATAATGAAATCTCCGGGCCGATCCCGGATAGTCTTCTGGAGTTGAAGAACCTGAAACTGTTGAGTCTTTTCTACAATGAGATGAGTGGTGCTGTTCCTGAAGGGATTGCTGAGCTTCCTTCACTGGAGACTCTTCTTATATGGAACAACTACTTCTCTGGGAATCTTCCACAGGATTTGGGGAGGAACTCCAACCTCATGTGGGTTGATGTGTCTACAAACAACTTCAATGGCAGCATTCCAGCAGATATCTGTGTGAAAGGTGTGCTCTTTAAGCTGATGCTGTTTTCGAATAATTTTAGTGGCAGTCTTGCACCATCTCTGTCCAATTGTTCTTCCCTTGTTCGTCTTCGGCTTGAAGATAACTCATTCTCAGGTGAGATCCCTTTGAAATTCAGCCACTTTCGTGATCTTTCATATGTAGACTTGTCCGAGAATAAACTCACTGGTGGGATTCCAATAGATATAGACCAAGCTCCCAAGCTTGAGTACTTTAATGTGTCCAATAATCCAGAATTAGGGGGCACAATTCCTGCACAAACATGGTCTTTGCCAGTTCTTCAGAATTTCTCAGCTTCCTCGTGTGGTATCGTAGGCAATCTTCCGGCATTTGGAAGCTGTAAATCCATATCTGTTATTGAATTGAACATGAACAGTTTATCAGGGGGTGTTCCAGACAGTGTTTCTAGCTGCCGAGCTCTTGAGAGATTTGGTTTGGCCAACAATAACTTATCAGGTCATATACCTGAGGAGCTTGCAAGTCTTCCTGCTCTGCGTGTCCTAGACCTATCACATAATAGTTTGGATGGACCAATACCTTCAAAGTTTGGTTCTTCTTCAAGCTTATCACTTCTGAATGTGTCTTTCAATGATATTTCTGGGACAATTCCCTCTGGAAAGGTAGTGAAGACTATGGGAAGTAGCGCATTCGTTGGAAATCCAAAGCTATGTGGAGAACCTTTGAGATCATGTCCCGGTTCAGTGGCTATCTTTGGAAGCAGAGGCACCGGGAAGCTTATATGGGTCTTGCTACTGTGTGCAGGCATAGTTATGTTCCTTGCTCTGTCAGCTCTAGGAGTACTTTATTTTTATAAAGGCAGCAAAGGTCAATGGAAGATGGTCTCATTTGCTGGACTCCCTCAATTCACAGCAAGCGATGTATTGAAGAGCTTCAGTTCCATAGAATCCATGGATGATGCATTGTCCCCGACGTCAGCATCAGTATGCAAAGCGGTTCTGCCAACAGGAATCACAGTTTCAGTGAAGAAGTTTGAATGCGATCCGAAGATGGTGAAAGTTATGTTGCCATTCATAACCCGAATTGGGAGTGCAAGGCATAAGAATCTAATCCGATTGCTCGGATTTTGCTACAACAAGCATCTGGTTTATCTCTTGTACGATTACTTGCCCAACGGAAGTTTATCAGAAAATATAAGAGTGAAAAGGGAATGGGCAGCTAAGTACAAAATTGTGGTGAGCATTGCAAGGGGATTGTGCTTCCTTCACCATGAATGTCATCCTGCAATTGGTCATGGAGACTTGAGATCAAGTAATATAATGTTTGACGAAAACATGGAACCGCATCTGACAGAATTCGGATTCAAGCATCTGCTGGAGTTGAACAAAACTTCAGGTACTGCAGAGACCTCCACCGTGGATACAGGTGCTGCAAACAGTTCTGTAGAAGAGGAGCTATACAGAGATGTATACAGCTTCGGGGAGATCATGCTCGAAATTTTATCCAACGGCAGGTTGACGAATTCAGGAGCAAGCTTACATAGCAAGTCGAGGGAAAGTGTTCTCAGAGAAATAATCAATGAGAATGAAGTTGGGGAGGAGATAAAAAGGGTGCTCGAGGTAGCTACGCTCTGCACTAGGAGCCGACCATCTGATCGACCATCCATGGAGGATACATTAAAGCTTTTACAGGCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010016 GO:0010065 GO:0010067 GO:0010087 GO:0010089 GO:0010154 GO:0010223 GO:0010346 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0044464 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071944 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

946

Amino Acids

102.81

Weight (kDa)

5.48

Isoelectric Point (pI)

36.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	168 - 276	1.2e-08	Leucine-rich repeat region
LRR_14	PF23598	283 - 376	1.7e-07	Leucine-rich repeat region
Pkinase	PF00069	707 - 940	1.9e-17	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	715 - 940	1.4e-20	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51350
fragaria_vesca	FvH4_1g01520
malus_domestica	MD02G1012000.v1.1 MD15G1157800.v1.1
prunus_persica	Prupe.7G253000_v2.0.a1
pyrus_communis	pycom02g01130 pycom15g14160
rosa_chinensis	RchiOBHm_Chr2g0086441
rosa_laevigata	RLG00000015759
rosa_multiflora	Rmu_sc0005127.1_g000003
rosa_roxburghii	Rroxscaffold_2G00154570
rosa_rugosa	Rorug01G0467300
rosa_samantha	Rh2AG018100 Rh2BG017600 Rh2CG018500 Rh2DG019400
rosa_wichuraiana	Rw2G001500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1995
AatII	GACGTC	1 cut(s)	2117
Acc36I	ACCTGC	1 cut(s)	2643
AccB1I	GGYRCC	1 cut(s)	1907
AccI	GTMKAC	3 cut(s)	1118, 1326, 2610
AccIII	TCCGGA	1 cut(s)	278
AciI	CCGC	2 cut(s)	2135, 2483
AclWI	GGATC	6 cut(s)	843, 856, 903, 919, 1279, 2177
AcoI	YGGCCR	3 cut(s)	372, 415, 1620
AcsI	RAATTY	5 cut(s)	1295, 1468, 2495, 2637, 2662
AcuI	CTGAAG	8 cut(s)	274, 500, 725, 814, 1023, 1448, 2059, 2517
AcyI	GRCGYC	1 cut(s)	2114
AfaI	GTAC	5 cut(s)	1394, 1983, 2300, 2366, 2539
AfiI	CCNNNNNNNGG	8 cut(s)	195, 650, 1105, 1421, 1514, 2226, 2429, 2652
AjnI	CCWGG	3 cut(s)	157, 369, 699
AleI	CACNNNNGTG	1 cut(s)	1308
AloI	GAACNNNNNNTCC	2 cut(s)	395, 427
Alw21I	GWGCWC	4 cut(s)	117, 1173, 1603, 2757
Alw26I	GTCTC	7 cut(s)	83, 513, 822, 1025, 2029, 2433, 2540
AlwI	GGATC	6 cut(s)	843, 856, 903, 919, 1279, 2177
AlwNI	CAGNNNCTG	3 cut(s)	74, 2540, 2570
Ama87I	CYCGRG	1 cut(s)	2756
Aor13HI	TCCGGA	1 cut(s)	278
AoxI	GGCC	4 cut(s)	372, 415, 920, 1620
ApeKI	GCWGC	7 cut(s)	59, 71, 1137, 1593, 2001, 2357, 2570
ApoI	RAATTY	5 cut(s)	1295, 1468, 2495, 2637, 2662
Asp700I	GAANNNNTTC	3 cut(s)	407, 2072, 2700
AspLEI	GCGC	1 cut(s)	1829
AspS9I	GGNCC	4 cut(s)	529, 560, 920, 1712
AsuC2I	CCSGG	4 cut(s)	919, 929, 1878, 1912
AsuHPI	GGTGA	6 cut(s)	358, 796, 1292, 2206, 2389, 2399
AsuII	TTCGAA	1 cut(s)	1193
AvaI	CYCGRG	1 cut(s)	2756
AvaII	GGWCC	3 cut(s)	529, 560, 1712
AxyI	CCTNAGG	1 cut(s)	1650
BaeGI	GKGCMC	1 cut(s)	1430
BalI	TGGCCA	2 cut(s)	374, 1622
BamHI	GGATCC	1 cut(s)	848
BanI	GGYRCC	1 cut(s)	1907
BanII	GRGCYC	2 cut(s)	117, 1603
BarI	GAAGNNNNNNTAC	2 cut(s)	1488, 1520
BauI	CACGAG	1 cut(s)	1483
BbsI	GAAGAC	5 cut(s)	26, 929, 1244, 1658, 1817
Bbv12I	GWGCWC	4 cut(s)	117, 1173, 1603, 2757
BbvCI	CCTCAGC	1 cut(s)	501
BbvI	GCAGC	7 cut(s)	71, 83, 1149, 1580, 2013, 2369, 2557
BccI	CCATC	7 cut(s)	178, 1228, 1703, 2014, 2185, 2797, 2809
BceAI	ACGGC	1 cut(s)	2665
BciT130I	CCWGG	3 cut(s)	159, 371, 701
BciVI	GTATCC	2 cut(s)	2554, 2806
BcnI	CCSGG	4 cut(s)	919, 929, 1878, 1912
BcoDI	GTCTC	7 cut(s)	83, 513, 822, 1025, 2029, 2433, 2540
BfaI	CTAG	7 cut(s)	242, 539, 572, 1590, 1685, 1976, 2778
BfmI	CTRYAG	4 cut(s)	28, 57, 2541, 2583
BfuAI	ACCTGC	1 cut(s)	2643
BfuI	GTATCC	2 cut(s)	2554, 2806
BisI	GCNGC	7 cut(s)	60, 72, 1138, 1594, 2002, 2358, 2571
BlpI	GCTNAGC	1 cut(s)	1014
BlsI	GCNGC	7 cut(s)	61, 73, 1139, 1595, 2003, 2359, 2572
BmcAI	AGTACT	2 cut(s)	1394, 1983
Bme1390I	CCNGG	7 cut(s)	159, 371, 701, 919, 929, 1878, 1912
Bme18I	GGWCC	3 cut(s)	529, 560, 1712
BmeT110I	CYCGRG	1 cut(s)	2756
BmgT120I	GGNCC	4 cut(s)	529, 560, 920, 1712
BmiI	GGNNCC	5 cut(s)	561, 850, 1909, 2481, 2783
BmrFI	CCNGG	7 cut(s)	159, 371, 701, 919, 929, 1878, 1912
BmrI	ACTGGG	1 cut(s)	365
BmsI	GCATC	8 cut(s)	454, 717, 1173, 2089, 2129, 2290, 2494, 2518
BmuI	ACTGGG	1 cut(s)	365
BpiI	GAAGAC	5 cut(s)	26, 929, 1244, 1658, 1817
BpmI	CTGGAG	3 cut(s)	962, 1049, 2537
Bpu10I	CCTNAGC	1 cut(s)	501
Bpu1102I	GCTNAGC	1 cut(s)	1014
Bpu14I	TTCGAA	1 cut(s)	1193
BpuEI	CTTGAG	6 cut(s)	509, 617, 833, 1409, 1625, 2464
BpuMI	CCSGG	4 cut(s)	919, 929, 1878, 1912
BsaHI	GRCGYC	1 cut(s)	2114
BsaI	GGTCTC	3 cut(s)	83, 2029, 2540
BsaJI	CCNNGG	6 cut(s)	369, 700, 713, 2091, 2556, 2805
BsaWI	WCCGGW	2 cut(s)	278, 437
BsaXI	ACNNNNNCTCC	2 cut(s)	395, 425
Bsc4I	CCNNNNNNNGG	8 cut(s)	195, 650, 1105, 1421, 1514, 2226, 2429, 2652
Bse118I	RCCGGY	1 cut(s)	266
Bse1I	ACTGG	8 cut(s)	149, 237, 360, 418, 857, 1032, 1354, 1457
Bse21I	CCTNAGG	1 cut(s)	1650
Bse3DI	GCAATG	1 cut(s)	2382
BseAI	TCCGGA	1 cut(s)	278
BseBI	CCWGG	3 cut(s)	159, 371, 701
BseDI	CCNNGG	6 cut(s)	369, 700, 713, 2091, 2556, 2805
BseGI	GGATG	5 cut(s)	708, 1714, 2101, 2419, 2801
BseLI	CCNNNNNNNGG	8 cut(s)	195, 650, 1105, 1421, 1514, 2226, 2429, 2652
BseMI	GCAATG	1 cut(s)	2382
BseNI	ACTGG	8 cut(s)	149, 237, 360, 418, 857, 1032, 1354, 1457
BseRI	GAGGAG	4 cut(s)	217, 1667, 2606, 2753
BseSI	GKGCMC	1 cut(s)	1430
BseXI	GCAGC	7 cut(s)	71, 83, 1149, 1580, 2013, 2369, 2557
BseYI	CCCAGC	2 cut(s)	424, 542
BsgI	GTGCAG	3 cut(s)	1422, 1962, 2758
BshFI	GGCC	4 cut(s)	374, 417, 922, 1622
BshNI	GGYRCC	1 cut(s)	1907
BsiHKAI	GWGCWC	4 cut(s)	117, 1173, 1603, 2757
BsiHKCI	CYCGRG	1 cut(s)	2756
BslFI	GGGAC	3 cut(s)	1798, 1860, 2092
BslI	CCNNNNNNNGG	8 cut(s)	195, 650, 1105, 1421, 1514, 2226, 2429, 2652
BsmAI	GTCTC	7 cut(s)	83, 513, 822, 1025, 2029, 2433, 2540
BsmFI	GGGAC	3 cut(s)	1798, 1860, 2092
BsmI	GAATGC	4 cut(s)	467, 1140, 1829, 2183
BsnI	GGCC	4 cut(s)	374, 417, 922, 1622
Bso31I	GGTCTC	3 cut(s)	83, 2029, 2540
BsoBI	CYCGRG	1 cut(s)	2756
Bsp119I	TTCGAA	1 cut(s)	1193
Bsp1286I	GDGCHC	5 cut(s)	117, 1173, 1430, 1603, 2757
Bsp13I	TCCGGA	1 cut(s)	278
Bsp1720I	GCTNAGC	1 cut(s)	1014
Bsp19I	CCATGG	2 cut(s)	2091, 2805
BspACI	CCGC	2 cut(s)	2135, 2483
BspANI	GGCC	4 cut(s)	374, 417, 922, 1622
BspEI	TCCGGA	1 cut(s)	278
BspLI	GGNNCC	5 cut(s)	561, 850, 1909, 2481, 2783
BspMAI	CTGCAG	2 cut(s)	61, 2545
BspMI	ACCTGC	1 cut(s)	2643
BspPI	GGATC	6 cut(s)	843, 856, 903, 919, 1279, 2177
BspQI	GCTCTTC	1 cut(s)	2063
BspT104I	TTCGAA	1 cut(s)	1193
BspT107I	GGYRCC	1 cut(s)	1907
BspTNI	GGTCTC	3 cut(s)	83, 2029, 2540
BsrDI	GCAATG	1 cut(s)	2382
BsrFI	RCCGGY	1 cut(s)	266
BsrI	ACTGG	8 cut(s)	149, 237, 360, 418, 857, 1032, 1354, 1457
BssAI	RCCGGY	1 cut(s)	266
BssECI	CCNNGG	6 cut(s)	369, 700, 713, 2091, 2556, 2805
BssNAI	GTATAC	1 cut(s)	2611
BssNI	GRCGYC	1 cut(s)	2114
BssSI	CACGAG	1 cut(s)	1483
BssT1I	CCWWGG	3 cut(s)	713, 2091, 2805
Bst1107I	GTATAC	1 cut(s)	2611
Bst2BI	CACGAG	1 cut(s)	1483
Bst2UI	CCWGG	3 cut(s)	159, 371, 701
Bst4CI	ACNGT	9 cut(s)	32, 667, 963, 1559, 1583, 1938, 2158, 2557, 2579
Bst6I	CTCTTC	5 cut(s)	251, 833, 1041, 2063, 2583
BstACI	GRCGYC	1 cut(s)	2114
BstBI	TTCGAA	1 cut(s)	1193
BstC8I	GCNNGC	8 cut(s)	347, 498, 656, 889, 1659, 1945, 2056, 2674
BstDSI	CCRYGG	3 cut(s)	2091, 2556, 2805
BstF5I	GGATG	5 cut(s)	708, 1714, 2101, 2419, 2801
BstHHI	GCGC	1 cut(s)	1829
BstMAI	GTCTC	7 cut(s)	83, 513, 822, 1025, 2029, 2433, 2540
BstMWI	GCNNNNNNNGC	5 cut(s)	68, 1177, 1970, 2682, 2781
BstNI	CCWGG	3 cut(s)	159, 371, 701
BstSCI	CCNGG	7 cut(s)	157, 369, 699, 917, 927, 1876, 1910
BstSFI	CTRYAG	4 cut(s)	28, 57, 2541, 2583
BstSLI	GKGCMC	1 cut(s)	1430
BstV1I	GCAGC	7 cut(s)	71, 83, 1149, 1580, 2013, 2369, 2557
BstV2I	GAAGAC	5 cut(s)	26, 929, 1244, 1658, 1817
BstX2I	RGATCY	3 cut(s)	848, 895, 1284
BstXI	CCANNNNNNTGG	2 cut(s)	845, 859
BstYI	RGATCY	3 cut(s)	848, 895, 1284
BstZ17I	GTATAC	1 cut(s)	2611
Bsu36I	CCTNAGG	1 cut(s)	1650
BsuI	GTATCC	2 cut(s)	2554, 2806
BsuRI	GGCC	4 cut(s)	374, 417, 922, 1622
BtgI	CCRYGG	3 cut(s)	2091, 2556, 2805
BtgZI	GCGATG	1 cut(s)	2073
BtsCI	GGATG	5 cut(s)	708, 1714, 2101, 2419, 2801
BtsI	GCAGTG	1 cut(s)	491
BveI	ACCTGC	1 cut(s)	2643
Cac8I	GCNNGC	8 cut(s)	347, 498, 656, 889, 1659, 1945, 2056, 2674
CaiI	CAGNNNCTG	3 cut(s)	74, 2540, 2570
CfoI	GCGC	1 cut(s)	1829
Cfr10I	RCCGGY	1 cut(s)	266
Cfr13I	GGNCC	4 cut(s)	529, 560, 920, 1712
Csp6I	GTAC	5 cut(s)	1393, 1982, 2299, 2365, 2538
CspCI	CAANNNNNGTGG	4 cut(s)	630, 665, 1062, 1097
CviQI	GTAC	5 cut(s)	1393, 1982, 2299, 2365, 2538
EaeI	YGGCCR	3 cut(s)	372, 415, 1620
Eam1104I	CTCTTC	5 cut(s)	251, 833, 1041, 2063, 2583
EarI	CTCTTC	5 cut(s)	251, 833, 1041, 2063, 2583
Ecl136II	GAGCTC	2 cut(s)	115, 1601
Eco130I	CCWWGG	3 cut(s)	713, 2091, 2805
Eco24I	GRGCYC	2 cut(s)	117, 1603
Eco31I	GGTCTC	3 cut(s)	83, 2029, 2540
Eco32I	GATATC	1 cut(s)	1153
Eco47I	GGWCC	3 cut(s)	529, 560, 1712
Eco53kI	GAGCTC	2 cut(s)	115, 1601
Eco57I	CTGAAG	8 cut(s)	274, 500, 725, 814, 1023, 1448, 2059, 2517
Eco81I	CCTNAGG	1 cut(s)	1650
Eco88I	CYCGRG	1 cut(s)	2756
EcoICRI	GAGCTC	2 cut(s)	115, 1601
EcoO109I	RGGNCCY	1 cut(s)	529
EcoRI	GAATTC	2 cut(s)	2495, 2662
EcoRII	CCWGG	3 cut(s)	157, 369, 699
EcoRV	GATATC	1 cut(s)	1153
EcoT14I	CCWWGG	3 cut(s)	713, 2091, 2805
EcoT22I	ATGCAT	2 cut(s)	469, 2104
EcoT38I	GRGCYC	2 cut(s)	117, 1603
ErhI	CCWWGG	3 cut(s)	713, 2091, 2805
FaqI	GGGAC	3 cut(s)	1798, 1860, 2092
FauNDI	CATATG	2 cut(s)	675, 1321
FblI	GTMKAC	3 cut(s)	1118, 1326, 2610
Fnu4HI	GCNGC	7 cut(s)	60, 72, 1138, 1594, 2002, 2358, 2571
FokI	GGATG	5 cut(s)	695, 1721, 2108, 2406, 2788
FriOI	GRGCYC	2 cut(s)	117, 1603
Fsp4HI	GCNGC	7 cut(s)	60, 72, 1138, 1594, 2002, 2358, 2571
FspBI	CTAG	7 cut(s)	242, 539, 572, 1590, 1685, 1976, 2778
GlaI	GCGC	1 cut(s)	1828
GluI	GCNGC	7 cut(s)	60, 72, 1138, 1594, 2002, 2358, 2571
GsaI	CCCAGC	2 cut(s)	428, 546
GsuI	CTGGAG	3 cut(s)	962, 1049, 2537
HaeIII	GGCC	4 cut(s)	374, 417, 922, 1622
HhaI	GCGC	1 cut(s)	1829
Hin1I	GRCGYC	1 cut(s)	2114
Hin6I	GCGC	1 cut(s)	1827
HinP1I	GCGC	1 cut(s)	1827
HincII	GTYRAC	2 cut(s)	286, 2658
HindII	GTYRAC	2 cut(s)	286, 2658
HindIII	AAGCTT	8 cut(s)	385, 809, 889, 1385, 1744, 1916, 2674, 2822
HphI	GGTGA	6 cut(s)	358, 796, 1292, 2206, 2389, 2399
Hpy166II	GTNNAC	7 cut(s)	286, 366, 872, 1119, 1327, 2611, 2658
Hpy8I	GTNNAC	7 cut(s)	286, 366, 872, 1119, 1327, 2611, 2658
Hpy99I	CGWCG	1 cut(s)	2116
HpyAV	CCTTC	6 cut(s)	28, 104, 998, 1032, 1731, 2414
HpyCH4III	ACNGT	9 cut(s)	32, 667, 963, 1559, 1583, 1938, 2158, 2557, 2579
HpyCH4IV	ACGT	1 cut(s)	2114
HpyF10VI	GCNNNNNNNGC	5 cut(s)	68, 1177, 1970, 2682, 2781
HpySE526I	ACGT	1 cut(s)	2114
Hsp92I	GRCGYC	1 cut(s)	2114
HspAI	GCGC	1 cut(s)	1827
Kpn2I	TCCGGA	1 cut(s)	278
LguI	GCTCTTC	1 cut(s)	2063
LmnI	GCTCC	7 cut(s)	354, 546, 1384, 1654, 2593, 2669, 2781
Lsp1109I	GCAGC	7 cut(s)	71, 83, 1149, 1580, 2013, 2369, 2557
LweI	GCATC	8 cut(s)	454, 717, 1173, 2089, 2129, 2290, 2494, 2518
MaeI	CTAG	7 cut(s)	242, 539, 572, 1590, 1685, 1976, 2778
MaeII	ACGT	1 cut(s)	2114
MaeIII	GTNAC	4 cut(s)	232, 326, 489, 667
MfeI	CAATTG	3 cut(s)	719, 1231, 2427
MflI	RGATCY	3 cut(s)	848, 895, 1284
MhlI	GDGCHC	5 cut(s)	117, 1173, 1430, 1603, 2757
MlsI	TGGCCA	2 cut(s)	374, 1622
MluNI	TGGCCA	2 cut(s)	374, 1622
MlyI	GAGTC	9 cut(s)	268, 291, 664, 742, 785, 824, 976, 1027, 2031
MmeI	TCCRAC	3 cut(s)	1119, 1816, 2670
Mox20I	TGGCCA	2 cut(s)	374, 1622
Mph1103I	ATGCAT	2 cut(s)	469, 2104
MroI	TCCGGA	1 cut(s)	278
MroXI	GAANNNNTTC	3 cut(s)	407, 2072, 2700
MscI	TGGCCA	2 cut(s)	374, 1622
MseI	TTAA	6 cut(s)	104, 380, 444, 1176, 1398, 2819
MslI	CAYNNNNRTG	5 cut(s)	857, 1308, 1444, 1952, 2125
Msp20I	TGGCCA	2 cut(s)	374, 1622
MspA1I	CMGCKG	3 cut(s)	62, 74, 428
MspR9I	CCNGG	7 cut(s)	159, 371, 701, 919, 929, 1878, 1912
MunI	CAATTG	3 cut(s)	719, 1231, 2427
Mva1269I	GAATGC	4 cut(s)	467, 1140, 1829, 2183
MvaI	CCWGG	3 cut(s)	159, 371, 701
MwoI	GCNNNNNNNGC	5 cut(s)	68, 1177, 1970, 2682, 2781
NciI	CCSGG	4 cut(s)	919, 929, 1878, 1912
NcoI	CCATGG	2 cut(s)	2091, 2805
NdeI	CATATG	2 cut(s)	675, 1321
NlaIV	GGNNCC	5 cut(s)	561, 850, 1909, 2481, 2783
NmeAIII	GCCGAG	1 cut(s)	1622
NmuCI	GTSAC	2 cut(s)	489, 667
NsiI	ATGCAT	2 cut(s)	469, 2104
NspV	TTCGAA	1 cut(s)	1193
OliI	CACNNNNGTG	1 cut(s)	1308
PaeR7I	CTCGAG	1 cut(s)	2756
PciSI	GCTCTTC	1 cut(s)	2063
PctI	GAATGC	4 cut(s)	467, 1140, 1829, 2183
PdmI	GAANNNNTTC	3 cut(s)	407, 2072, 2700
PfoI	TCCNGGA	2 cut(s)	157, 927
PkrI	GCNGC	7 cut(s)	61, 73, 1139, 1595, 2003, 2359, 2572
PleI	GAGTC	9 cut(s)	267, 290, 664, 741, 784, 823, 975, 1027, 2031
PpsI	GAGTC	9 cut(s)	267, 290, 664, 741, 784, 823, 975, 1027, 2031
PpuMI	RGGWCCY	1 cut(s)	529
PsiI	TTATAA	1 cut(s)	1995
Psp124BI	GAGCTC	2 cut(s)	117, 1603
Psp5II	RGGWCCY	1 cut(s)	529
Psp6I	CCWGG	3 cut(s)	157, 369, 699
PspFI	CCCAGC	2 cut(s)	424, 542
PspGI	CCWGG	3 cut(s)	157, 369, 699
PspN4I	GGNNCC	5 cut(s)	561, 850, 1909, 2481, 2783
PspPI	GGNCC	4 cut(s)	529, 560, 920, 1712
PspPPI	RGGWCCY	1 cut(s)	529
PspXI	VCTCGAGB	1 cut(s)	2756
PsrI	GAACNNNNNNTAC	2 cut(s)	311, 343
PstI	CTGCAG	2 cut(s)	61, 2545
PstNI	CAGNNNCTG	3 cut(s)	74, 2540, 2570
PsuI	RGATCY	3 cut(s)	848, 895, 1284
PvuII	CAGCTG	3 cut(s)	62, 74, 428
RsaI	GTAC	5 cut(s)	1394, 1983, 2300, 2366, 2539
RsaNI	GTAC	5 cut(s)	1393, 1982, 2299, 2365, 2538
RseI	CAYNNNNRTG	5 cut(s)	857, 1308, 1444, 1952, 2125
SacI	GAGCTC	2 cut(s)	117, 1603
SapI	GCTCTTC	1 cut(s)	2063
SaqAI	TTAA	6 cut(s)	104, 380, 444, 1176, 1398, 2819
SatI	GCNGC	7 cut(s)	60, 72, 1138, 1594, 2002, 2358, 2571
Sau96I	GGNCC	4 cut(s)	529, 560, 920, 1712
ScaI	AGTACT	2 cut(s)	1394, 1983
SchI	GAGTC	9 cut(s)	268, 291, 664, 742, 785, 824, 976, 1027, 2031
ScrFI	CCNGG	7 cut(s)	159, 371, 701, 919, 929, 1878, 1912
SduI	GDGCHC	5 cut(s)	117, 1173, 1430, 1603, 2757
SfaNI	GCATC	8 cut(s)	454, 717, 1173, 2089, 2129, 2290, 2494, 2518
SfcI	CTRYAG	4 cut(s)	28, 57, 2541, 2583
Sfr274I	CTCGAG	1 cut(s)	2756
SfuI	TTCGAA	1 cut(s)	1193
SinI	GGWCC	3 cut(s)	529, 560, 1712
SlaI	CTCGAG	1 cut(s)	2756
SmiMI	CAYNNNNRTG	5 cut(s)	857, 1308, 1444, 1952, 2125
SmlI	CTYRAG	7 cut(s)	524, 596, 812, 1388, 1604, 2443, 2756
SmoI	CTYRAG	7 cut(s)	524, 596, 812, 1388, 1604, 2443, 2756
SsiI	CCGC	2 cut(s)	2135, 2483
SspMI	CTAG	7 cut(s)	242, 539, 572, 1590, 1685, 1976, 2778
SstI	GAGCTC	2 cut(s)	117, 1603
StyD4I	CCNGG	7 cut(s)	157, 369, 699, 917, 927, 1876, 1910
StyI	CCWWGG	3 cut(s)	713, 2091, 2805
TaaI	ACNGT	9 cut(s)	32, 667, 963, 1559, 1583, 1938, 2158, 2557, 2579
TaiI	ACGT	1 cut(s)	2117
TaqI	TCGA	6 cut(s)	1193, 2634, 2690, 2757, 2797, 2836
TatI	WGTACW	3 cut(s)	1392, 1981, 2364
Tru1I	TTAA	6 cut(s)	104, 380, 444, 1176, 1398, 2819
Tru9I	TTAA	6 cut(s)	104, 380, 444, 1176, 1398, 2819
TseFI	GTSAC	2 cut(s)	489, 667
TseI	GCWGC	7 cut(s)	59, 71, 1137, 1593, 2001, 2357, 2570
Tsp45I	GTSAC	2 cut(s)	489, 667
TspDTI	ATGAA	8 cut(s)	37, 596, 924, 1308, 1568, 2203, 2427, 2742
TspGWI	ACGGA	1 cut(s)	2331
VpaK11BI	GGWCC	3 cut(s)	529, 560, 1712
XapI	RAATTY	5 cut(s)	1295, 1468, 2495, 2637, 2662
XbaI	TCTAGA	1 cut(s)	241
XcmI	CCANNNNNNNNNTGG	2 cut(s)	425, 2089
XhoI	CTCGAG	1 cut(s)	2756
XmiI	GTMKAC	3 cut(s)	1118, 1326, 2610
XmnI	GAANNNNTTC	3 cut(s)	407, 2072, 2700
XspI	CTAG	7 cut(s)	242, 539, 572, 1590, 1685, 1976, 2778
ZraI	GACGTC	1 cut(s)	2115
ZrmI	AGTACT	2 cut(s)	1394, 1983
Zsp2I	ATGCAT	2 cut(s)	469, 2104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.